Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:18:16 (4106546): wrapper (7.7.26015): starting
16:18:16 (4106546): wrapper: running run_atlas (--nthreads 4)
[2025-10-15 16:18:16] Arguments: --nthreads 4
[2025-10-15 16:18:16] Threads: 4
[2025-10-15 16:18:16] Checking for CVMFS
[2025-10-15 16:18:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-15 16:18:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-15 16:18:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-15 16:18:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-15 16:18:16] 2.9.2.0 4055600 164 57408 151737 0 56 29157512 36864000 0 130560 0 131295 99.983 9375 1462 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-15 16:18:16] CVMFS is ok
[2025-10-15 16:18:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-15 16:18:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-15 16:18:16] Further information can be found at the LHC@home message board.
[2025-10-15 16:18:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-15 16:18:16] Checking for apptainer binary...
[2025-10-15 16:18:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-15 16:18:16] Running /usr/bin/apptainer --version
[2025-10-15 16:18:16] apptainer version 1.4.1-1.1
[2025-10-15 16:18:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-15 16:18:16] thA309
[2025-10-15 16:18:16] apptainer works
[2025-10-15 16:18:16] Set ATHENA_PROC_NUMBER=4
[2025-10-15 16:18:16] Set ATHENA_CORE_NUMBER=4
[2025-10-15 16:18:16] Starting ATLAS job with PandaID=6845694424
[2025-10-15 16:18:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-15 17:38:37]  *** The last 200 lines of the pilot log: ***
[2025-10-15 17:38:37] 2025-10-15 15:37:36,924 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-15 17:38:37] 2025-10-15 15:37:36,958 | INFO     | all data control threads have been joined
[2025-10-15 17:38:37] 2025-10-15 15:37:36,970 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-15 17:38:37] 2025-10-15 15:37:36,971 | INFO     | aborting loop
[2025-10-15 17:38:37] 2025-10-15 15:37:37,187 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-15 17:38:37] 2025-10-15 15:37:37,929 | INFO     | [job] retrieve thread has finished
[2025-10-15 17:38:37] 2025-10-15 15:37:37,930 | INFO     | [job] queue monitor thread has finished
[2025-10-15 17:38:37] 2025-10-15 15:37:37,940 | INFO     | all job control threads have been joined
[2025-10-15 17:38:37] 2025-10-15 15:37:37,963 | INFO     | [data] control thread has finished
[2025-10-15 17:38:37] 2025-10-15 15:37:37,966 | INFO     | [payload] validate_post thread has finished
[2025-10-15 17:38:37] 2025-10-15 15:37:37,976 | INFO     | [job] job monitor thread has finished
[2025-10-15 17:38:37] 2025-10-15 15:37:38,073 | INFO     | all payload control threads have been joined
[2025-10-15 17:38:37] 2025-10-15 15:37:38,292 | INFO     | [data] copytool_in thread has finished
[2025-10-15 17:38:37] 2025-10-15 15:37:38,611 | INFO     | [payload] execute_payloads thread has finished
[2025-10-15 17:38:37] 2025-10-15 15:37:38,945 | INFO     | [job] control thread has finished
[2025-10-15 17:38:37] 2025-10-15 15:37:39,017 | INFO     | [payload] failed_post thread has finished
[2025-10-15 17:38:37] 2025-10-15 15:37:39,078 | INFO     | [payload] control thread has finished
[2025-10-15 17:38:37] 2025-10-15 15:37:39,104 | INFO     | [job] validate thread has finished
[2025-10-15 17:38:37] 2025-10-15 15:37:39,186 | INFO     | [job] create_data_payload thread has finished
[2025-10-15 17:38:37] 2025-10-15 15:37:39,189 | INFO     | [data] copytool_out thread has finished
[2025-10-15 17:38:37] 2025-10-15 15:37:39,275 | INFO     | [payload] validate_pre thread has finished
[2025-10-15 17:38:37] 2025-10-15 15:37:39,724 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-15 17:38:37] 2025-10-15 15:37:43,731 | INFO     | [data] queue_monitor thread has finished
[2025-10-15 17:38:37] 2025-10-15 15:37:47,199 | INFO     | job.realtimelogging is not enabled
[2025-10-15 17:38:37] 2025-10-15 15:37:48,205 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-15 17:38:37] 2025-10-15 15:38:30,099 | INFO     | [monitor] cgroup control has ended
[2025-10-15 17:38:37] 2025-10-15 15:38:31,967 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140607493142336)>', '<ExcThread(monitor, started 140606424741632)>']
[2025-10-15 17:38:37] 2025-10-15 15:38:32,214 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-15 17:38:37] 2025-10-15 15:38:32,214 | INFO     | [monitor] control thread has ended
[2025-10-15 17:38:37] 2025-10-15 15:38:36,993 | INFO     | all workflow threads have been joined
[2025-10-15 17:38:37] 2025-10-15 15:38:36,993 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-15 17:38:37] 2025-10-15 15:38:36,993 | INFO     | traces error code: 0
[2025-10-15 17:38:37] 2025-10-15 15:38:36,993 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-15 17:38:37] 2025-10-15 15:38:37,077 [wrapper] ==== pilot stdout END ====
[2025-10-15 17:38:37] 2025-10-15 15:38:37,081 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-15 17:38:37] 2025-10-15 15:38:37,085 [wrapper] pilotpid: 4110329
[2025-10-15 17:38:37] 2025-10-15 15:38:37,089 [wrapper] Pilot exit status: 0
[2025-10-15 17:38:37] 2025-10-15 15:38:37,101 [wrapper] pandaids: 6845694424
[2025-10-15 17:38:37] 2025-10-15 15:38:37,126 [wrapper] cleanup supervisor_pilot 4129661 4110330
[2025-10-15 17:38:37] 2025-10-15 15:38:37,130 [wrapper] Test setup, not cleaning
[2025-10-15 17:38:37] 2025-10-15 15:38:37,133 [wrapper] apfmon messages muted
[2025-10-15 17:38:37] 2025-10-15 15:38:37,138 [wrapper] ==== wrapper stdout END ====
[2025-10-15 17:38:37] 2025-10-15 15:38:37,142 [wrapper] ==== wrapper stderr END ====
[2025-10-15 17:38:37]  *** Error codes and diagnostics ***
[2025-10-15 17:38:37]     "exeErrorCode": 0,
[2025-10-15 17:38:37]     "exeErrorDiag": "",
[2025-10-15 17:38:37]     "pilotErrorCode": 0,
[2025-10-15 17:38:37]     "pilotErrorDiag": "",
[2025-10-15 17:38:37]  *** Listing of results directory ***
[2025-10-15 17:38:37] total 434336
[2025-10-15 17:38:37] -rw-r--r-- 1 boinc boinc    557409 Oct 15 11:36 pilot3.tar.gz
[2025-10-15 17:38:37] -rw-r--r-- 1 boinc boinc      5112 Oct 15 11:46 queuedata.json
[2025-10-15 17:38:37] -rwx------ 1 boinc boinc     36292 Oct 15 11:46 runpilot2-wrapper.sh
[2025-10-15 17:38:37] -rw-r--r-- 1 boinc boinc       100 Oct 15 16:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-15 17:38:37] -rwxr-xr-x 1 boinc boinc      7986 Oct 15 16:18 run_atlas
[2025-10-15 17:38:37] -rw-r--r-- 1 boinc boinc       105 Oct 15 16:18 job.xml
[2025-10-15 17:38:37] -rw-r--r-- 2 boinc boinc 227483917 Oct 15 16:18 EVNT.46776529._000187.pool.root.1
[2025-10-15 17:38:37] -rw-r--r-- 2 boinc boinc    569690 Oct 15 16:18 input.tar.gz
[2025-10-15 17:38:37] -rw-r--r-- 2 boinc boinc     15120 Oct 15 16:18 start_atlas.sh
[2025-10-15 17:38:37] drwxrwx--x 2 boinc boinc      4096 Oct 15 16:18 shared
[2025-10-15 17:38:37] -rw-r--r-- 1 boinc boinc         0 Oct 15 16:18 boinc_setup_complete
[2025-10-15 17:38:37] -rw-r--r-- 1 boinc boinc      6377 Oct 15 16:18 init_data.xml
[2025-10-15 17:38:37] -rw-r--r-- 1 boinc boinc         0 Oct 15 16:18 boinc_lockfile
[2025-10-15 17:38:37] -rw-r--r-- 1 boinc boinc      2561 Oct 15 16:18 pandaJob.out
[2025-10-15 17:38:37] -rw------- 1 boinc boinc    973863 Oct 15 16:18 agis_schedconf.cvmfs.json
[2025-10-15 17:38:37] -rw------- 1 boinc boinc   1560740 Oct 15 16:18 agis_ddmendpoints.agis.ALL.json
[2025-10-15 17:38:37] drwx------ 5 boinc boinc      4096 Oct 15 16:18 pilot3
[2025-10-15 17:38:37] -rw------- 1 boinc boinc        95 Oct 15 17:36 pilot_heartbeat.json
[2025-10-15 17:38:37] -rw------- 1 boinc boinc 211457668 Oct 15 17:37 HITS.46776533._003315.pool.root.1
[2025-10-15 17:38:37] -rw-r--r-- 1 boinc boinc       529 Oct 15 17:37 boinc_task_state.xml
[2025-10-15 17:38:37] -rw------- 1 boinc boinc      1032 Oct 15 17:37 memory_monitor_summary.json
[2025-10-15 17:38:37] -rw------- 1 boinc boinc    267590 Oct 15 17:37 log.46776533._003315.job.log.tgz.1
[2025-10-15 17:38:37] -rw------- 1 boinc boinc      7759 Oct 15 17:37 heartbeat.json
[2025-10-15 17:38:37] -rw-r--r-- 1 boinc boinc      8192 Oct 15 17:38 boinc_mmap_file
[2025-10-15 17:38:37] -rw-r--r-- 1 boinc boinc        27 Oct 15 17:38 wrapper_checkpoint.txt
[2025-10-15 17:38:37] -rw------- 1 boinc boinc      4628 Oct 15 17:38 pilotlog.txt
[2025-10-15 17:38:37] -rw------- 1 boinc boinc    699661 Oct 15 17:38 log.46776533._003315.job.log.1
[2025-10-15 17:38:37] -rw------- 1 boinc boinc       357 Oct 15 17:38 output.list
[2025-10-15 17:38:37] -rw-r--r-- 1 boinc boinc       620 Oct 15 17:38 runtime_log
[2025-10-15 17:38:37] -rw------- 1 boinc boinc    983040 Oct 15 17:38 result.tar.gz
[2025-10-15 17:38:37] -rw-r--r-- 1 boinc boinc      8777 Oct 15 17:38 runtime_log.err
[2025-10-15 17:38:37] -rw------- 1 boinc boinc       658 Oct 15 17:38 SVpMDmmGDT8n9Rq4apOajLDm4fhM0noT9bVof3QYDmKBWMDmLih5tn.diag
[2025-10-15 17:38:37] -rw-r--r-- 1 boinc boinc      6730 Oct 15 17:38 stderr.txt
[2025-10-15 17:38:37] HITS file was successfully produced:
[2025-10-15 17:38:37] -rw------- 1 boinc boinc 211457668 Oct 15 17:37 shared/HITS.pool.root.1
[2025-10-15 17:38:37]  *** Contents of shared directory: ***
[2025-10-15 17:38:37] total 430204
[2025-10-15 17:38:37] -rw-r--r-- 2 boinc boinc 227483917 Oct 15 16:18 ATLAS.root_0
[2025-10-15 17:38:37] -rw-r--r-- 2 boinc boinc    569690 Oct 15 16:18 input.tar.gz
[2025-10-15 17:38:37] -rw-r--r-- 2 boinc boinc     15120 Oct 15 16:18 start_atlas.sh
[2025-10-15 17:38:37] -rw------- 1 boinc boinc 211457668 Oct 15 17:37 HITS.pool.root.1
[2025-10-15 17:38:37] -rw------- 1 boinc boinc    983040 Oct 15 17:38 result.tar.gz
17:38:38 (4106546): run_atlas exited; CPU time 17999.300903
17:38:38 (4106546): called boinc_finish(0)

</stderr_txt>
]]>

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