Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:04:57 (8571): wrapper (7.7.26015): starting
05:04:57 (8571): wrapper: running run_atlas (--nthreads 8)
[2025-10-16 05:04:57] Arguments: --nthreads 8
[2025-10-16 05:04:57] Threads: 8
[2025-10-16 05:04:57] Checking for CVMFS
[2025-10-16 05:04:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-16 05:04:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-16 05:04:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-16 05:05:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-16 05:05:00] 2.11.2.0 26884 225620 143468 151756 1 195 21098353 25165824 4632 130560 0 117091278 99.880 70477339 3143 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-16 05:05:00] CVMFS is ok
[2025-10-16 05:05:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-16 05:05:00] Checking for apptainer binary...
[2025-10-16 05:05:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-16 05:05:00] Running /usr/bin/apptainer --version
[2025-10-16 05:05:00] apptainer version 1.3.2-1.el7
[2025-10-16 05:05:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-16 05:05:23] cg-vwn403.simple-grid.lan
[2025-10-16 05:05:23] apptainer works
[2025-10-16 05:05:23] Set ATHENA_PROC_NUMBER=8
[2025-10-16 05:05:23] Set ATHENA_CORE_NUMBER=8
[2025-10-16 05:05:23] Starting ATLAS job with PandaID=6845694985
[2025-10-16 05:05:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-16 09:27:04]  *** The last 200 lines of the pilot log: ***
[2025-10-16 09:27:04] 2025-10-16 07:26:25,750 | INFO     | fitting pss+swap vs Time
[2025-10-16 09:27:04] 2025-10-16 07:26:25,751 | INFO     | sum of square deviations: 4504437945.0
[2025-10-16 09:27:04] 2025-10-16 07:26:25,760 | INFO     | sum of deviations: 61918948438.5
[2025-10-16 09:27:04] 2025-10-16 07:26:25,760 | INFO     | mean x: 1760592053.5
[2025-10-16 09:27:04] 2025-10-16 07:26:25,760 | INFO     | mean y: 2480428.823770492
[2025-10-16 09:27:04] 2025-10-16 07:26:25,760 | INFO     | -- intersect: -24198987082.32414
[2025-10-16 09:27:04] 2025-10-16 07:26:25,760 | INFO     | intersect: -24198987082.32414
[2025-10-16 09:27:04] 2025-10-16 07:26:25,761 | INFO     | chi2: 7.400135156749058
[2025-10-16 09:27:04] 2025-10-16 07:26:25,761 | INFO     | sum of square deviations: 4233158440.0
[2025-10-16 09:27:04] 2025-10-16 07:26:25,763 | INFO     | sum of deviations: 76916820829.00003
[2025-10-16 09:27:04] 2025-10-16 07:26:25,763 | INFO     | mean x: 1760591901.0
[2025-10-16 09:27:04] 2025-10-16 07:26:25,763 | INFO     | mean y: 2488708.6736401673
[2025-10-16 09:27:04] 2025-10-16 07:26:25,764 | INFO     | -- intersect: -31987604202.237
[2025-10-16 09:27:04] 2025-10-16 07:26:25,764 | INFO     | intersect: -31987604202.237
[2025-10-16 09:27:04] 2025-10-16 07:26:25,764 | INFO     | chi2: 6.697656153896948
[2025-10-16 09:27:04] 2025-10-16 07:26:25,764 | INFO     | current chi2=6.697656153896948 (change=9.492786117716193 %)
[2025-10-16 09:27:04] 2025-10-16 07:26:25,764 | INFO     | right removable region: 238
[2025-10-16 09:27:04] 2025-10-16 07:26:25,765 | INFO     | sum of square deviations: 4233158440.0
[2025-10-16 09:27:04] 2025-10-16 07:26:25,766 | INFO     | sum of deviations: -23836710993.999992
[2025-10-16 09:27:04] 2025-10-16 07:26:25,767 | INFO     | mean x: 1760592206.0
[2025-10-16 09:27:04] 2025-10-16 07:26:25,767 | INFO     | mean y: 2528598.2845188286
[2025-10-16 09:27:04] 2025-10-16 07:26:25,767 | INFO     | -- intersect: 9916338390.084066
[2025-10-16 09:27:04] 2025-10-16 07:26:25,767 | INFO     | intersect: 9916338390.084066
[2025-10-16 09:27:04] 2025-10-16 07:26:25,767 | INFO     | chi2: 2.5243830643610865
[2025-10-16 09:27:04] 2025-10-16 07:26:25,767 | INFO     | current chi2=2.5243830643610865 (change=65.88733839463995 %)
[2025-10-16 09:27:04] 2025-10-16 07:26:25,768 | INFO     | sum of square deviations: 3972995422.5
[2025-10-16 09:27:04] 2025-10-16 07:26:25,770 | INFO     | sum of deviations: -67455700546.499985
[2025-10-16 09:27:04] 2025-10-16 07:26:25,770 | INFO     | mean x: 1760592358.5
[2025-10-16 09:27:04] 2025-10-16 07:26:25,770 | INFO     | mean y: 2554018.705128205
[2025-10-16 09:27:04] 2025-10-16 07:26:25,770 | INFO     | -- intersect: 29894859015.29669
[2025-10-16 09:27:04] 2025-10-16 07:26:25,770 | INFO     | intersect: 29894859015.29669
[2025-10-16 09:27:04] 2025-10-16 07:26:25,770 | INFO     | chi2: 1.0077957395428996
[2025-10-16 09:27:04] 2025-10-16 07:26:25,770 | INFO     | current chi2=1.0077957395428996 (change=60.07754315219312 %)
[2025-10-16 09:27:04] 2025-10-16 07:26:25,771 | INFO     | sum of square deviations: 3723716330.0
[2025-10-16 09:27:04] 2025-10-16 07:26:25,772 | INFO     | sum of deviations: -66555996815.0
[2025-10-16 09:27:04] 2025-10-16 07:26:25,773 | INFO     | mean x: 1760592511.0
[2025-10-16 09:27:04] 2025-10-16 07:26:25,773 | INFO     | mean y: 2553430.676855895
[2025-10-16 09:27:04] 2025-10-16 07:26:25,773 | INFO     | -- intersect: 31470576010.857895
[2025-10-16 09:27:04] 2025-10-16 07:26:25,773 | INFO     | intersect: 31470576010.857895
[2025-10-16 09:27:04] 2025-10-16 07:26:25,773 | INFO     | chi2: 0.9861881470251977
[2025-10-16 09:27:04] 2025-10-16 07:26:25,773 | INFO     | current chi2=0.9861881470251977 (change=2.1440448366553198 %)
[2025-10-16 09:27:04] 2025-10-16 07:26:25,773 | INFO     | left removable region: 30
[2025-10-16 09:27:04] 2025-10-16 07:26:25,774 | INFO     | sum of square deviations: 2790348132.0
[2025-10-16 09:27:04] 2025-10-16 07:26:25,775 | INFO     | sum of deviations: -29963550475.499996
[2025-10-16 09:27:04] 2025-10-16 07:26:25,775 | INFO     | mean x: 1760592785.5
[2025-10-16 09:27:04] 2025-10-16 07:26:25,775 | INFO     | mean y: 2550105.139423077
[2025-10-16 09:27:04] 2025-10-16 07:26:25,775 | INFO     | -- intersect: 18908295302.359276
[2025-10-16 09:27:04] 2025-10-16 07:26:25,775 | INFO     | intersect: 18908295302.359276
[2025-10-16 09:27:04] 2025-10-16 07:26:25,776 | INFO     | chi2: 0.1672728339814483
[2025-10-16 09:27:04] 2025-10-16 07:26:25,776 | INFO     | -- intersect: 18908295302.359276
[2025-10-16 09:27:04] 2025-10-16 07:26:25,776 | INFO     | current memory leak: -10.74 B/s (using 208 data points, chi2=0.17)
[2025-10-16 09:27:04] 2025-10-16 07:26:25,776 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-16 09:27:04] 2025-10-16 07:26:25,777 | INFO     | ..............................
[2025-10-16 09:27:04] 2025-10-16 07:26:25,777 | INFO     | . Timing measurements:
[2025-10-16 09:27:04] 2025-10-16 07:26:25,777 | INFO     | . get job = 0 s
[2025-10-16 09:27:04] 2025-10-16 07:26:25,777 | INFO     | . initial setup = 9 s
[2025-10-16 09:27:04] 2025-10-16 07:26:25,777 | INFO     | . payload setup = 135 s
[2025-10-16 09:27:04] 2025-10-16 07:26:25,777 | INFO     | . stage-in = 0 s
[2025-10-16 09:27:04] 2025-10-16 07:26:25,777 | INFO     | . payload execution = 14980 s
[2025-10-16 09:27:04] 2025-10-16 07:26:25,777 | INFO     | . stage-out = 3 s
[2025-10-16 09:27:04] 2025-10-16 07:26:25,777 | INFO     | . log creation = 1 s
[2025-10-16 09:27:04] 2025-10-16 07:26:25,777 | INFO     | ..............................
[2025-10-16 09:27:04] 2025-10-16 07:26:26,381 | INFO     | 
[2025-10-16 09:27:04] 2025-10-16 07:26:26,381 | INFO     | job summary report
[2025-10-16 09:27:04] 2025-10-16 07:26:26,381 | INFO     | --------------------------------------------------
[2025-10-16 09:27:04] 2025-10-16 07:26:26,381 | INFO     | PanDA job id: 6845694985
[2025-10-16 09:27:04] 2025-10-16 07:26:26,381 | INFO     | task id: 46776533
[2025-10-16 09:27:04] 2025-10-16 07:26:26,381 | INFO     | errors: (none)
[2025-10-16 09:27:04] 2025-10-16 07:26:26,381 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-16 09:27:04] 2025-10-16 07:26:26,382 | INFO     | pilot state: finished 
[2025-10-16 09:27:04] 2025-10-16 07:26:26,382 | INFO     | transexitcode: 0
[2025-10-16 09:27:04] 2025-10-16 07:26:26,382 | INFO     | exeerrorcode: 0
[2025-10-16 09:27:04] 2025-10-16 07:26:26,382 | INFO     | exeerrordiag: 
[2025-10-16 09:27:04] 2025-10-16 07:26:26,382 | INFO     | exitcode: 0
[2025-10-16 09:27:04] 2025-10-16 07:26:26,382 | INFO     | exitmsg: OK
[2025-10-16 09:27:04] 2025-10-16 07:26:26,382 | INFO     | cpuconsumptiontime: 56305 s
[2025-10-16 09:27:04] 2025-10-16 07:26:26,382 | INFO     | nevents: 400
[2025-10-16 09:27:04] 2025-10-16 07:26:26,382 | INFO     | neventsw: 0
[2025-10-16 09:27:04] 2025-10-16 07:26:26,382 | INFO     | pid: 18880
[2025-10-16 09:27:04] 2025-10-16 07:26:26,382 | INFO     | pgrp: 18880
[2025-10-16 09:27:04] 2025-10-16 07:26:26,382 | INFO     | corecount: 8
[2025-10-16 09:27:04] 2025-10-16 07:26:26,383 | INFO     | event service: False
[2025-10-16 09:27:04] 2025-10-16 07:26:26,383 | INFO     | sizes: {0: 2348703, 1: 2348958, 12: 2348958, 23: 2348986, 33: 2349014, 44: 2349070, 55: 2349226, 66: 2349254, 76: 2349282, 87: 2349338, 93: 2349628, 98: 2349936, 1
[2025-10-16 09:27:04] 2025-10-16 07:26:26,383 | INFO     | --------------------------------------------------
[2025-10-16 09:27:04] 2025-10-16 07:26:26,383 | INFO     | 
[2025-10-16 09:27:04] 2025-10-16 07:26:26,383 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-10-16 09:27:04] 2025-10-16 07:26:26,997 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-16 09:27:04] 2025-10-16 07:26:26,998 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-16 09:27:04] 2025-10-16 07:26:26,998 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-16 09:27:04] 2025-10-16 07:26:26,998 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-16 09:27:04] 2025-10-16 07:26:26,998 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-16 09:27:04] 2025-10-16 07:26:26,998 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-16 09:27:04] 2025-10-16 07:26:26,998 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-16 09:27:04] 2025-10-16 07:26:26,998 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-16 09:27:04] 2025-10-16 07:26:26,998 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-16 09:27:04] 2025-10-16 07:26:26,998 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-16 09:27:04] 2025-10-16 07:26:26,998 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-16 09:27:04] 2025-10-16 07:26:26,998 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-16 09:27:04] 2025-10-16 07:26:26,999 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-16 09:27:04] 2025-10-16 07:26:26,999 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-16 09:27:04] 2025-10-16 07:26:26,999 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-16 09:27:04] 2025-10-16 07:26:26,999 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-16 09:27:04] 2025-10-16 07:26:26,999 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-16 09:27:04] 2025-10-16 07:26:26,999 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-16 09:27:04] 2025-10-16 07:26:26,999 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-16 09:27:04] 2025-10-16 07:26:26,999 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-16 09:27:04] 2025-10-16 07:26:27,000 | INFO     | job 6845694985 has completed (purged errors)
[2025-10-16 09:27:04] 2025-10-16 07:26:27,000 | INFO     | overall cleanup function is called
[2025-10-16 09:27:04] 2025-10-16 07:26:28,012 | INFO     | --- collectZombieJob: --- 10, [18880]
[2025-10-16 09:27:04] 2025-10-16 07:26:28,012 | INFO     | zombie collector waiting for pid 18880
[2025-10-16 09:27:04] 2025-10-16 07:26:28,012 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-16 09:27:04] 2025-10-16 07:26:28,012 | INFO     | collected zombie processes
[2025-10-16 09:27:04] 2025-10-16 07:26:28,012 | INFO     | will attempt to kill all subprocesses of pid=18880
[2025-10-16 09:27:04] 2025-10-16 07:26:28,120 | INFO     | process IDs to be killed: [18880] (in reverse order)
[2025-10-16 09:27:04] 2025-10-16 07:26:28,972 | WARNING  | found no corresponding commands to process id(s)
[2025-10-16 09:27:04] 2025-10-16 07:26:28,972 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-16 09:27:04] 2025-10-16 07:26:28,975 | INFO     | did not find any defunct processes belonging to 18880
[2025-10-16 09:27:04] 2025-10-16 07:26:28,978 | INFO     | did not find any defunct processes belonging to 18880
[2025-10-16 09:27:04] 2025-10-16 07:26:28,978 | INFO     | ready for new job
[2025-10-16 09:27:04] 2025-10-16 07:26:28,978 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-16 09:27:04] 2025-10-16 07:26:28,981 | INFO     | ***************************************
[2025-10-16 09:27:04] 2025-10-16 07:26:28,981 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-16 09:27:04] 2025-10-16 07:26:28,981 | INFO     | ***************************************
[2025-10-16 09:27:04] 2025-10-16 07:26:28,981 | INFO     | 
[2025-10-16 09:27:04] 2025-10-16 07:26:28,982 | INFO     | pilot is running in a VM
[2025-10-16 09:27:04] 2025-10-16 07:26:28,982 | INFO     | architecture information:
[2025-10-16 09:27:04] 2025-10-16 07:26:28,985 | INFO     | executing command: cat /etc/os-release
[2025-10-16 09:27:04] 2025-10-16 07:26:29,103 | INFO     | cat /etc/os-release:
[2025-10-16 09:27:04] NAME="CentOS Linux"
[2025-10-16 09:27:04] VERSION="7 (Core)"
[2025-10-16 09:27:04] ID="centos"
[2025-10-16 09:27:04] ID_LIKE="rhel fedora"
[2025-10-16 09:27:04] VERSION_ID="7"
[2025-10-16 09:27:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-16 09:27:04] ANSI_COLOR="0;31"
[2025-10-16 09:27:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-16 09:27:04] HOME_URL="https://www.centos.org/"
[2025-10-16 09:27:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-16 09:27:04] 
[2025-10-16 09:27:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-16 09:27:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-16 09:27:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-16 09:27:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-16 09:27:04] 
[2025-10-16 09:27:04] 2025-10-16 07:26:29,104 | INFO     | ***************************************
[2025-10-16 09:27:04] 2025-10-16 07:26:29,607 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-10-16 09:27:04] 2025-10-16 07:26:29,702 | INFO     | sufficient remaining disk space (495954427904 B)
[2025-10-16 09:27:04] 2025-10-16 07:26:29,702 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-16 09:27:04] 2025-10-16 07:26:29,702 | INFO     | current server update state: UPDATING_FINAL
[2025-10-16 09:27:04] 2025-10-16 07:26:29,702 | INFO     | update_server=False
[2025-10-16 09:27:04] 2025-10-16 07:26:29,703 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-16 09:27:04] 2025-10-16 07:26:29,704 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-16 09:27:04] 2025-10-16 07:26:29,705 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-16 09:27:04] 2025-10-16 07:26:29,985 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-16 09:27:04] 2025-10-16 07:26:29,985 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-16 09:27:04] 2025-10-16 07:26:29,985 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-16 09:27:04] 2025-10-16 07:26:29,985 | INFO     | will abort loop
[2025-10-16 09:27:04] 2025-10-16 07:26:30,083 | INFO     | all data control threads have been joined
[2025-10-16 09:27:04] 2025-10-16 07:26:30,351 | INFO     | all payload control threads have been joined
[2025-10-16 09:27:04] 2025-10-16 07:26:30,662 | INFO     | all job control threads have been joined
[2025-10-16 09:27:04] 2025-10-16 07:26:30,709 | INFO     | [job] retrieve thread has finished
[2025-10-16 09:27:04] 2025-10-16 07:26:30,806 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-16 09:27:04] 2025-10-16 07:26:30,919 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-16 09:27:04] 2025-10-16 07:26:30,991 | INFO     | [job] job monitor thread has finished
[2025-10-16 09:27:04] 2025-10-16 07:26:31,089 | INFO     | [data] control thread has finished
[2025-10-16 09:27:04] 2025-10-16 07:26:31,113 | INFO     | [data] copytool_in thread has finished
[2025-10-16 09:27:04] 2025-10-16 07:26:31,237 | INFO     | [payload] validate_post thread has finished
[2025-10-16 09:27:04] 2025-10-16 07:26:31,357 | INFO     | [payload] control thread has finished
[2025-10-16 09:27:04] 2025-10-16 07:26:31,432 | INFO     | [payload] validate_pre thread has finished
[2025-10-16 09:27:04] 2025-10-16 07:26:31,588 | INFO     | [job] validate thread has finished
[2025-10-16 09:27:04] 2025-10-16 07:26:31,624 | INFO     | [job] create_data_payload thread has finished
[2025-10-16 09:27:04] 2025-10-16 07:26:31,668 | INFO     | [job] control thread has finished
[2025-10-16 09:27:04] 2025-10-16 07:26:31,695 | INFO     | [payload] execute_payloads thread has finished
[2025-10-16 09:27:04] 2025-10-16 07:26:31,711 | INFO     | [data] copytool_out thread has finished
[2025-10-16 09:27:04] 2025-10-16 07:26:31,853 | INFO     | [payload] failed_post thread has finished
[2025-10-16 09:27:04] 2025-10-16 07:26:31,925 | INFO     | [job] queue monitor thread has finished
[2025-10-16 09:27:04] 2025-10-16 07:26:33,713 | INFO     | [data] queue_monitor thread has finished
[2025-10-16 09:27:04] 2025-10-16 07:26:53,631 | INFO     | [monitor] cgroup control has ended
[2025-10-16 09:27:04] 2025-10-16 07:26:55,189 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140585356982080)>', '<ExcThread(monitor, started 140584547251968)>']
[2025-10-16 09:27:04] 2025-10-16 07:26:58,774 | INFO     | PID=12360 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-16 09:27:04] 2025-10-16 07:26:58,774 | INFO     | .. there are 9 such processes running
[2025-10-16 09:27:04] 2025-10-16 07:26:58,774 | INFO     | found 0 job(s) in 20 queues
[2025-10-16 09:27:04] 2025-10-16 07:26:58,774 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-16 09:27:04] 2025-10-16 07:26:58,774 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-16 09:27:04] 2025-10-16 07:26:58,774 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-16 09:27:04] 2025-10-16 07:26:58,775 | INFO     | [monitor] control thread has ended
[2025-10-16 09:27:04] 2025-10-16 07:27:00,214 | INFO     | all workflow threads have been joined
[2025-10-16 09:27:04] 2025-10-16 07:27:00,214 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-16 09:27:04] 2025-10-16 07:27:00,214 | INFO     | traces error code: 0
[2025-10-16 09:27:04] 2025-10-16 07:27:00,214 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-16 09:27:04] 2025-10-16 07:27:00,490 [wrapper] ==== pilot stdout END ====
[2025-10-16 09:27:04] 2025-10-16 07:27:00,591 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-16 09:27:04] 2025-10-16 07:27:00,659 [wrapper] pilotpid: 12360
[2025-10-16 09:27:04] 2025-10-16 07:27:00,703 [wrapper] Pilot exit status: 0
[2025-10-16 09:27:04] 2025-10-16 07:27:01,044 [wrapper] pandaids: 6845694985
[2025-10-16 09:27:04] 2025-10-16 07:27:01,840 [wrapper] cleanup supervisor_pilot 13487 12361
[2025-10-16 09:27:04] 2025-10-16 07:27:01,952 [wrapper] Test setup, not cleaning
[2025-10-16 09:27:04] 2025-10-16 07:27:02,021 [wrapper] apfmon messages muted
[2025-10-16 09:27:04] 2025-10-16 07:27:02,098 [wrapper] ==== wrapper stdout END ====
[2025-10-16 09:27:04] 2025-10-16 07:27:02,192 [wrapper] ==== wrapper stderr END ====
[2025-10-16 09:27:04]  *** Error codes and diagnostics ***
[2025-10-16 09:27:04]     "exeErrorCode": 0,
[2025-10-16 09:27:04]     "exeErrorDiag": "",
[2025-10-16 09:27:04]     "pilotErrorCode": 0,
[2025-10-16 09:27:04]     "pilotErrorDiag": "",
[2025-10-16 09:27:04]  *** Listing of results directory ***
[2025-10-16 09:27:04] total 439888
[2025-10-16 09:27:04] -rw-r--r--. 1 boinc boinc    557409 Oct 15 11:36 pilot3.tar.gz
[2025-10-16 09:27:04] -rw-r--r--. 1 boinc boinc      5112 Oct 15 11:46 queuedata.json
[2025-10-16 09:27:04] -rwx------. 1 boinc boinc     36292 Oct 15 11:46 runpilot2-wrapper.sh
[2025-10-16 09:27:04] -rw-r--r--. 1 boinc boinc       100 Oct 16 05:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-16 09:27:04] -rwxr-xr-x. 1 boinc boinc      7986 Oct 16 05:04 run_atlas
[2025-10-16 09:27:04] -rw-r--r--. 1 boinc boinc       105 Oct 16 05:04 job.xml
[2025-10-16 09:27:04] -rw-r--r--. 1 boinc boinc      6391 Oct 16 05:04 init_data.xml
[2025-10-16 09:27:04] -rw-r--r--. 2 boinc boinc 229876654 Oct 16 05:04 EVNT.46776529._000201.pool.root.1
[2025-10-16 09:27:04] -rw-r--r--. 2 boinc boinc     15120 Oct 16 05:04 start_atlas.sh
[2025-10-16 09:27:04] drwxrwx--x. 2 boinc boinc        68 Oct 16 05:04 shared
[2025-10-16 09:27:04] -rw-r--r--. 2 boinc boinc    569688 Oct 16 05:04 input.tar.gz
[2025-10-16 09:27:04] -rw-r--r--. 1 boinc boinc         0 Oct 16 05:04 boinc_lockfile
[2025-10-16 09:27:04] -rw-r--r--. 1 boinc boinc      2561 Oct 16 05:05 pandaJob.out
[2025-10-16 09:27:04] -rw-------. 1 boinc boinc    974318 Oct 16 05:09 agis_schedconf.cvmfs.json
[2025-10-16 09:27:04] drwx------. 5 boinc boinc      4096 Oct 16 05:09 pilot3
[2025-10-16 09:27:04] -rw-------. 1 boinc boinc 211604121 Oct 16 09:23 HITS.46776533._003666.pool.root.1
[2025-10-16 09:27:04] -rw-r--r--. 1 boinc boinc       531 Oct 16 09:23 boinc_task_state.xml
[2025-10-16 09:27:04] -rw-------. 1 boinc boinc      1014 Oct 16 09:24 memory_monitor_summary.json
[2025-10-16 09:27:04] -rw-------. 1 boinc boinc   1560740 Oct 16 09:24 agis_ddmendpoints.agis.ALL.json
[2025-10-16 09:27:04] -rw-------. 1 boinc boinc    470957 Oct 16 09:24 log.46776533._003666.job.log.tgz.1
[2025-10-16 09:27:04] -rw-------. 1 boinc boinc        95 Oct 16 09:26 pilot_heartbeat.json
[2025-10-16 09:27:04] -rw-------. 1 boinc boinc      7781 Oct 16 09:26 heartbeat.json
[2025-10-16 09:27:04] -rw-r--r--. 1 boinc boinc      8192 Oct 16 09:26 boinc_mmap_file
[2025-10-16 09:27:04] -rw-r--r--. 1 boinc boinc        28 Oct 16 09:26 wrapper_checkpoint.txt
[2025-10-16 09:27:04] -rw-------. 1 boinc boinc      5071 Oct 16 09:27 pilotlog.txt
[2025-10-16 09:27:04] -rw-------. 1 boinc boinc   2067811 Oct 16 09:27 log.46776533._003666.job.log.1
[2025-10-16 09:27:04] -rw-------. 1 boinc boinc       357 Oct 16 09:27 output.list
[2025-10-16 09:27:04] -rw-r--r--. 1 boinc boinc       620 Oct 16 09:27 runtime_log
[2025-10-16 09:27:04] -rw-------. 1 boinc boinc   2560000 Oct 16 09:27 result.tar.gz
[2025-10-16 09:27:04] -rw-r--r--. 1 boinc boinc      8717 Oct 16 09:27 runtime_log.err
[2025-10-16 09:27:04] -rw-------. 1 boinc boinc       657 Oct 16 09:27 Of4LDmzGDT8n9Rq4apOajLDm4fhM0noT9bVof3QYDm4BWMDmkDhvum.diag
[2025-10-16 09:27:04] -rw-r--r--. 1 boinc boinc     20637 Oct 16 09:27 stderr.txt
[2025-10-16 09:27:04] HITS file was successfully produced:
[2025-10-16 09:27:04] -rw-------. 1 boinc boinc 211604121 Oct 16 09:23 shared/HITS.pool.root.1
[2025-10-16 09:27:04]  *** Contents of shared directory: ***
[2025-10-16 09:27:04] total 434216
[2025-10-16 09:27:04] -rw-r--r--. 2 boinc boinc 229876654 Oct 16 05:04 ATLAS.root_0
[2025-10-16 09:27:04] -rw-r--r--. 2 boinc boinc     15120 Oct 16 05:04 start_atlas.sh
[2025-10-16 09:27:04] -rw-r--r--. 2 boinc boinc    569688 Oct 16 05:04 input.tar.gz
[2025-10-16 09:27:04] -rw-------. 1 boinc boinc 211604121 Oct 16 09:23 HITS.pool.root.1
[2025-10-16 09:27:04] -rw-------. 1 boinc boinc   2560000 Oct 16 09:27 result.tar.gz
09:27:06 (8571): run_atlas exited; CPU time 56494.340913
09:27:06 (8571): called boinc_finish(0)

</stderr_txt>
]]>

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