Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:17:28 (1919): wrapper (7.7.26015): starting
09:17:28 (1919): wrapper: running run_atlas (--nthreads 8)
[2025-10-16 09:17:28] Arguments: --nthreads 8
[2025-10-16 09:17:28] Threads: 8
[2025-10-16 09:17:28] Checking for CVMFS
[2025-10-16 09:17:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-16 09:17:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-16 09:17:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-16 09:17:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-16 09:17:31] 2.11.2.0 11346 151880 138084 151763 1 11 14498965 25165824 4632 130560 0 68603056 99.909 25817733 3113 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-16 09:17:31] CVMFS is ok
[2025-10-16 09:17:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-16 09:17:31] Checking for apptainer binary...
[2025-10-16 09:17:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-16 09:17:31] Running /usr/bin/apptainer --version
[2025-10-16 09:17:31] apptainer version 1.3.2-1.el7
[2025-10-16 09:17:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-16 09:17:56] cg-vwn408.simple-grid.lan
[2025-10-16 09:17:56] apptainer works
[2025-10-16 09:17:56] Set ATHENA_PROC_NUMBER=8
[2025-10-16 09:17:56] Set ATHENA_CORE_NUMBER=8
[2025-10-16 09:17:56] Starting ATLAS job with PandaID=6845709181
[2025-10-16 09:17:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-16 13:37:20]  *** The last 200 lines of the pilot log: ***
[2025-10-16 13:37:20] 2025-10-16 11:36:42,525 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-16 13:37:20] 2025-10-16 11:36:42,525 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-16 13:37:20] 2025-10-16 11:36:42,530 | INFO     | fitting pss+swap vs Time
[2025-10-16 13:37:20] 2025-10-16 11:36:42,530 | INFO     | sum of square deviations: 4340323240.0
[2025-10-16 13:37:20] 2025-10-16 11:36:42,538 | INFO     | sum of deviations: 47310252997.99999
[2025-10-16 13:37:20] 2025-10-16 11:36:42,538 | INFO     | mean x: 1760607115.0
[2025-10-16 13:37:20] 2025-10-16 11:36:42,538 | INFO     | mean y: 2464044.2282157675
[2025-10-16 13:37:20] 2025-10-16 11:36:42,538 | INFO     | -- intersect: -19188449497.208588
[2025-10-16 13:37:20] 2025-10-16 11:36:42,542 | INFO     | intersect: -19188449497.208588
[2025-10-16 13:37:20] 2025-10-16 11:36:42,543 | INFO     | chi2: 6.864498031542961
[2025-10-16 13:37:20] 2025-10-16 11:36:42,543 | INFO     | sum of square deviations: 4075741535.0
[2025-10-16 13:37:20] 2025-10-16 11:36:42,545 | INFO     | sum of deviations: 62815661522.99998
[2025-10-16 13:37:20] 2025-10-16 11:36:42,545 | INFO     | mean x: 1760606962.5
[2025-10-16 13:37:20] 2025-10-16 11:36:42,545 | INFO     | mean y: 2472822.025423729
[2025-10-16 13:37:20] 2025-10-16 11:36:42,545 | INFO     | -- intersect: -27132145524.531998
[2025-10-16 13:37:20] 2025-10-16 11:36:42,546 | INFO     | intersect: -27132145524.531998
[2025-10-16 13:37:20] 2025-10-16 11:36:42,546 | INFO     | chi2: 6.1102864451974845
[2025-10-16 13:37:20] 2025-10-16 11:36:42,546 | INFO     | current chi2=6.1102864451974845 (change=10.987133842559347 %)
[2025-10-16 13:37:20] 2025-10-16 11:36:42,546 | INFO     | right removable region: 235
[2025-10-16 13:37:20] 2025-10-16 11:36:42,546 | INFO     | sum of square deviations: 4075741535.0
[2025-10-16 13:37:20] 2025-10-16 11:36:42,548 | INFO     | sum of deviations: -36125755438.99999
[2025-10-16 13:37:20] 2025-10-16 11:36:42,548 | INFO     | mean x: 1760607267.5
[2025-10-16 13:37:20] 2025-10-16 11:36:42,549 | INFO     | mean y: 2512094.584745763
[2025-10-16 13:37:20] 2025-10-16 11:36:42,549 | INFO     | -- intersect: 15607836186.813044
[2025-10-16 13:37:20] 2025-10-16 11:36:42,549 | INFO     | intersect: 15607836186.813044
[2025-10-16 13:37:20] 2025-10-16 11:36:42,549 | INFO     | chi2: 2.125362891132252
[2025-10-16 13:37:20] 2025-10-16 11:36:42,549 | INFO     | current chi2=2.125362891132252 (change=69.03833490277039 %)
[2025-10-16 13:37:20] 2025-10-16 11:36:42,550 | INFO     | sum of square deviations: 3822136780.0
[2025-10-16 13:37:20] 2025-10-16 11:36:42,551 | INFO     | sum of deviations: -67732576283.0
[2025-10-16 13:37:20] 2025-10-16 11:36:42,552 | INFO     | mean x: 1760607420.0
[2025-10-16 13:37:20] 2025-10-16 11:36:42,552 | INFO     | mean y: 2530927.432900433
[2025-10-16 13:37:20] 2025-10-16 11:36:42,552 | INFO     | -- intersect: 31202480914.457127
[2025-10-16 13:37:20] 2025-10-16 11:36:42,552 | INFO     | intersect: 31202480914.457127
[2025-10-16 13:37:20] 2025-10-16 11:36:42,552 | INFO     | chi2: 1.0573638033057589
[2025-10-16 13:37:20] 2025-10-16 11:36:42,552 | INFO     | current chi2=1.0573638033057589 (change=50.25019926162041 %)
[2025-10-16 13:37:20] 2025-10-16 11:36:42,553 | INFO     | sum of square deviations: 3579276412.5
[2025-10-16 13:37:20] 2025-10-16 11:36:42,554 | INFO     | sum of deviations: -63592877437.5
[2025-10-16 13:37:20] 2025-10-16 11:36:42,554 | INFO     | mean x: 1760607572.5
[2025-10-16 13:37:20] 2025-10-16 11:36:42,555 | INFO     | mean y: 2528303.4557522126
[2025-10-16 13:37:20] 2025-10-16 11:36:42,555 | INFO     | -- intersect: 31283180779.05634
[2025-10-16 13:37:20] 2025-10-16 11:36:42,555 | INFO     | intersect: 31283180779.05634
[2025-10-16 13:37:20] 2025-10-16 11:36:42,555 | INFO     | chi2: 1.0478228484369794
[2025-10-16 13:37:20] 2025-10-16 11:36:42,555 | INFO     | current chi2=1.0478228484369794 (change=0.9023341671949136 %)
[2025-10-16 13:37:20] 2025-10-16 11:36:42,555 | INFO     | left removable region: 30
[2025-10-16 13:37:20] 2025-10-16 11:36:42,556 | INFO     | sum of square deviations: 2671343110.0
[2025-10-16 13:37:20] 2025-10-16 11:36:42,557 | INFO     | sum of deviations: -24912897394.000008
[2025-10-16 13:37:20] 2025-10-16 11:36:42,557 | INFO     | mean x: 1760607847.0
[2025-10-16 13:37:20] 2025-10-16 11:36:42,557 | INFO     | mean y: 2523478.9853658536
[2025-10-16 13:37:20] 2025-10-16 11:36:42,557 | INFO     | -- intersect: 16421920328.15397
[2025-10-16 13:37:20] 2025-10-16 11:36:42,557 | INFO     | intersect: 16421920328.15397
[2025-10-16 13:37:20] 2025-10-16 11:36:42,558 | INFO     | chi2: 0.1604965747263275
[2025-10-16 13:37:20] 2025-10-16 11:36:42,558 | INFO     | -- intersect: 16421920328.15397
[2025-10-16 13:37:20] 2025-10-16 11:36:42,558 | INFO     | current memory leak: -9.33 B/s (using 205 data points, chi2=0.16)
[2025-10-16 13:37:20] 2025-10-16 11:36:42,558 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-16 13:37:20] 2025-10-16 11:36:42,559 | INFO     | ..............................
[2025-10-16 13:37:20] 2025-10-16 11:36:42,559 | INFO     | . Timing measurements:
[2025-10-16 13:37:20] 2025-10-16 11:36:42,559 | INFO     | . get job = 0 s
[2025-10-16 13:37:20] 2025-10-16 11:36:42,559 | INFO     | . initial setup = 8 s
[2025-10-16 13:37:20] 2025-10-16 11:36:42,559 | INFO     | . payload setup = 131 s
[2025-10-16 13:37:20] 2025-10-16 11:36:42,559 | INFO     | . stage-in = 0 s
[2025-10-16 13:37:20] 2025-10-16 11:36:42,559 | INFO     | . payload execution = 14861 s
[2025-10-16 13:37:20] 2025-10-16 11:36:42,559 | INFO     | . stage-out = 4 s
[2025-10-16 13:37:20] 2025-10-16 11:36:42,559 | INFO     | . log creation = 1 s
[2025-10-16 13:37:20] 2025-10-16 11:36:42,559 | INFO     | ..............................
[2025-10-16 13:37:20] 2025-10-16 11:36:42,710 | INFO     | 
[2025-10-16 13:37:20] 2025-10-16 11:36:42,710 | INFO     | job summary report
[2025-10-16 13:37:20] 2025-10-16 11:36:42,711 | INFO     | --------------------------------------------------
[2025-10-16 13:37:20] 2025-10-16 11:36:42,711 | INFO     | PanDA job id: 6845709181
[2025-10-16 13:37:20] 2025-10-16 11:36:42,711 | INFO     | task id: 46776533
[2025-10-16 13:37:20] 2025-10-16 11:36:42,711 | INFO     | errors: (none)
[2025-10-16 13:37:20] 2025-10-16 11:36:42,711 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-16 13:37:20] 2025-10-16 11:36:42,711 | INFO     | pilot state: finished 
[2025-10-16 13:37:20] 2025-10-16 11:36:42,711 | INFO     | transexitcode: 0
[2025-10-16 13:37:20] 2025-10-16 11:36:42,711 | INFO     | exeerrorcode: 0
[2025-10-16 13:37:20] 2025-10-16 11:36:42,711 | INFO     | exeerrordiag: 
[2025-10-16 13:37:20] 2025-10-16 11:36:42,711 | INFO     | exitcode: 0
[2025-10-16 13:37:20] 2025-10-16 11:36:42,712 | INFO     | exitmsg: OK
[2025-10-16 13:37:20] 2025-10-16 11:36:42,712 | INFO     | cpuconsumptiontime: 55521 s
[2025-10-16 13:37:20] 2025-10-16 11:36:42,712 | INFO     | nevents: 400
[2025-10-16 13:37:20] 2025-10-16 11:36:42,712 | INFO     | neventsw: 0
[2025-10-16 13:37:20] 2025-10-16 11:36:42,712 | INFO     | pid: 12641
[2025-10-16 13:37:20] 2025-10-16 11:36:42,712 | INFO     | pgrp: 12641
[2025-10-16 13:37:20] 2025-10-16 11:36:42,712 | INFO     | corecount: 8
[2025-10-16 13:37:20] 2025-10-16 11:36:42,712 | INFO     | event service: False
[2025-10-16 13:37:20] 2025-10-16 11:36:42,712 | INFO     | sizes: {0: 2348098, 1: 2348954, 2: 2348954, 12: 2348982, 23: 2349010, 34: 2349038, 44: 2349194, 55: 2349222, 66: 2349250, 76: 2349278, 87: 2349334, 90: 2349904, 98
[2025-10-16 13:37:20] 2025-10-16 11:36:42,712 | INFO     | --------------------------------------------------
[2025-10-16 13:37:20] 2025-10-16 11:36:42,712 | INFO     | 
[2025-10-16 13:37:20] 2025-10-16 11:36:42,713 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-10-16 13:37:20] 2025-10-16 11:36:43,302 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-16 13:37:20] 2025-10-16 11:36:43,302 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-16 13:37:20] 2025-10-16 11:36:43,302 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-16 13:37:20] 2025-10-16 11:36:43,302 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-16 13:37:20] 2025-10-16 11:36:43,303 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-16 13:37:20] 2025-10-16 11:36:43,303 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-16 13:37:20] 2025-10-16 11:36:43,303 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-16 13:37:20] 2025-10-16 11:36:43,303 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-16 13:37:20] 2025-10-16 11:36:43,303 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-16 13:37:20] 2025-10-16 11:36:43,303 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-16 13:37:20] 2025-10-16 11:36:43,303 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-16 13:37:20] 2025-10-16 11:36:43,303 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-16 13:37:20] 2025-10-16 11:36:43,303 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-16 13:37:20] 2025-10-16 11:36:43,303 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-16 13:37:20] 2025-10-16 11:36:43,303 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-16 13:37:20] 2025-10-16 11:36:43,304 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-16 13:37:20] 2025-10-16 11:36:43,304 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-16 13:37:20] 2025-10-16 11:36:43,304 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-16 13:37:20] 2025-10-16 11:36:43,304 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-16 13:37:20] 2025-10-16 11:36:43,304 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-16 13:37:20] 2025-10-16 11:36:43,304 | INFO     | job 6845709181 has completed (purged errors)
[2025-10-16 13:37:20] 2025-10-16 11:36:43,304 | INFO     | overall cleanup function is called
[2025-10-16 13:37:20] 2025-10-16 11:36:44,313 | INFO     | --- collectZombieJob: --- 10, [12641]
[2025-10-16 13:37:20] 2025-10-16 11:36:44,313 | INFO     | zombie collector waiting for pid 12641
[2025-10-16 13:37:20] 2025-10-16 11:36:44,314 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-16 13:37:20] 2025-10-16 11:36:44,314 | INFO     | collected zombie processes
[2025-10-16 13:37:20] 2025-10-16 11:36:44,314 | INFO     | will attempt to kill all subprocesses of pid=12641
[2025-10-16 13:37:20] 2025-10-16 11:36:44,447 | INFO     | process IDs to be killed: [12641] (in reverse order)
[2025-10-16 13:37:20] 2025-10-16 11:36:45,186 | WARNING  | found no corresponding commands to process id(s)
[2025-10-16 13:37:20] 2025-10-16 11:36:45,186 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-16 13:37:20] 2025-10-16 11:36:45,189 | INFO     | did not find any defunct processes belonging to 12641
[2025-10-16 13:37:20] 2025-10-16 11:36:45,192 | INFO     | did not find any defunct processes belonging to 12641
[2025-10-16 13:37:20] 2025-10-16 11:36:45,193 | INFO     | ready for new job
[2025-10-16 13:37:20] 2025-10-16 11:36:45,193 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-16 13:37:20] 2025-10-16 11:36:45,195 | INFO     | ***************************************
[2025-10-16 13:37:20] 2025-10-16 11:36:45,195 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-16 13:37:20] 2025-10-16 11:36:45,195 | INFO     | ***************************************
[2025-10-16 13:37:20] 2025-10-16 11:36:45,196 | INFO     | 
[2025-10-16 13:37:20] 2025-10-16 11:36:45,196 | INFO     | pilot is running in a VM
[2025-10-16 13:37:20] 2025-10-16 11:36:45,196 | INFO     | architecture information:
[2025-10-16 13:37:20] 2025-10-16 11:36:45,204 | INFO     | executing command: cat /etc/os-release
[2025-10-16 13:37:20] 2025-10-16 11:36:45,388 | INFO     | cat /etc/os-release:
[2025-10-16 13:37:20] NAME="CentOS Linux"
[2025-10-16 13:37:20] VERSION="7 (Core)"
[2025-10-16 13:37:20] ID="centos"
[2025-10-16 13:37:20] ID_LIKE="rhel fedora"
[2025-10-16 13:37:20] VERSION_ID="7"
[2025-10-16 13:37:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-16 13:37:20] ANSI_COLOR="0;31"
[2025-10-16 13:37:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-16 13:37:20] HOME_URL="https://www.centos.org/"
[2025-10-16 13:37:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-16 13:37:20] 
[2025-10-16 13:37:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-16 13:37:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-16 13:37:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-16 13:37:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-16 13:37:20] 
[2025-10-16 13:37:20] 2025-10-16 11:36:45,388 | INFO     | ***************************************
[2025-10-16 13:37:20] 2025-10-16 11:36:45,891 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-10-16 13:37:20] 2025-10-16 11:36:46,047 | INFO     | sufficient remaining disk space (495765684224 B)
[2025-10-16 13:37:20] 2025-10-16 11:36:46,047 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-16 13:37:20] 2025-10-16 11:36:46,048 | INFO     | current server update state: UPDATING_FINAL
[2025-10-16 13:37:20] 2025-10-16 11:36:46,048 | INFO     | update_server=False
[2025-10-16 13:37:20] 2025-10-16 11:36:46,048 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-16 13:37:20] 2025-10-16 11:36:46,050 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-16 13:37:20] 2025-10-16 11:36:46,071 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-16 13:37:20] 2025-10-16 11:36:46,491 | INFO     | all payload control threads have been joined
[2025-10-16 13:37:20] 2025-10-16 11:36:46,819 | INFO     | all data control threads have been joined
[2025-10-16 13:37:20] 2025-10-16 11:36:46,874 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-16 13:37:20] 2025-10-16 11:36:46,874 | INFO     | aborting loop
[2025-10-16 13:37:20] 2025-10-16 11:36:47,054 | INFO     | [job] retrieve thread has finished
[2025-10-16 13:37:20] 2025-10-16 11:36:47,060 | INFO     | all job control threads have been joined
[2025-10-16 13:37:20] 2025-10-16 11:36:47,340 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-16 13:37:20] 2025-10-16 11:36:47,497 | INFO     | [payload] control thread has finished
[2025-10-16 13:37:20] 2025-10-16 11:36:47,517 | INFO     | [data] copytool_in thread has finished
[2025-10-16 13:37:20] 2025-10-16 11:36:47,541 | INFO     | [payload] failed_post thread has finished
[2025-10-16 13:37:20] 2025-10-16 11:36:47,621 | INFO     | [job] create_data_payload thread has finished
[2025-10-16 13:37:20] 2025-10-16 11:36:47,722 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-16 13:37:20] 2025-10-16 11:36:47,731 | INFO     | [job] validate thread has finished
[2025-10-16 13:37:20] 2025-10-16 11:36:47,825 | INFO     | [data] control thread has finished
[2025-10-16 13:37:20] 2025-10-16 11:36:47,880 | INFO     | [job] job monitor thread has finished
[2025-10-16 13:37:20] 2025-10-16 11:36:47,898 | INFO     | [payload] validate_post thread has finished
[2025-10-16 13:37:20] 2025-10-16 11:36:47,932 | INFO     | [payload] validate_pre thread has finished
[2025-10-16 13:37:20] 2025-10-16 11:36:48,065 | INFO     | [job] control thread has finished
[2025-10-16 13:37:20] 2025-10-16 11:36:48,078 | INFO     | [data] copytool_out thread has finished
[2025-10-16 13:37:20] 2025-10-16 11:36:48,258 | INFO     | [payload] execute_payloads thread has finished
[2025-10-16 13:37:20] 2025-10-16 11:36:48,728 | INFO     | [job] queue monitor thread has finished
[2025-10-16 13:37:20] 2025-10-16 11:36:50,059 | INFO     | [data] queue_monitor thread has finished
[2025-10-16 13:37:20] 2025-10-16 11:37:11,566 | INFO     | [monitor] cgroup control has ended
[2025-10-16 13:37:20] 2025-10-16 11:37:11,904 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140093418559296)>', '<ExcThread(monitor, started 140092706387712)>']
[2025-10-16 13:37:20] 2025-10-16 11:37:15,111 | INFO     | PID=6031 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-16 13:37:20] 2025-10-16 11:37:15,111 | INFO     | .. there are 9 such processes running
[2025-10-16 13:37:20] 2025-10-16 11:37:15,111 | INFO     | found 0 job(s) in 20 queues
[2025-10-16 13:37:20] 2025-10-16 11:37:15,112 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-16 13:37:20] 2025-10-16 11:37:15,112 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-16 13:37:20] 2025-10-16 11:37:15,112 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-16 13:37:20] 2025-10-16 11:37:15,112 | INFO     | [monitor] control thread has ended
[2025-10-16 13:37:20] 2025-10-16 11:37:16,930 | INFO     | all workflow threads have been joined
[2025-10-16 13:37:20] 2025-10-16 11:37:16,930 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-16 13:37:20] 2025-10-16 11:37:16,931 | INFO     | traces error code: 0
[2025-10-16 13:37:20] 2025-10-16 11:37:16,931 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-16 13:37:20] 2025-10-16 11:37:17,281 [wrapper] ==== pilot stdout END ====
[2025-10-16 13:37:20] 2025-10-16 11:37:17,394 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-16 13:37:20] 2025-10-16 11:37:17,501 [wrapper] pilotpid: 6031
[2025-10-16 13:37:20] 2025-10-16 11:37:17,565 [wrapper] Pilot exit status: 0
[2025-10-16 13:37:20] 2025-10-16 11:37:18,115 [wrapper] pandaids: 6845709181
[2025-10-16 13:37:20] 2025-10-16 11:37:18,752 [wrapper] cleanup supervisor_pilot 24797 6032
[2025-10-16 13:37:20] 2025-10-16 11:37:18,793 [wrapper] Test setup, not cleaning
[2025-10-16 13:37:20] 2025-10-16 11:37:18,860 [wrapper] apfmon messages muted
[2025-10-16 13:37:20] 2025-10-16 11:37:18,892 [wrapper] ==== wrapper stdout END ====
[2025-10-16 13:37:20] 2025-10-16 11:37:18,982 [wrapper] ==== wrapper stderr END ====
[2025-10-16 13:37:20]  *** Error codes and diagnostics ***
[2025-10-16 13:37:20]     "exeErrorCode": 0,
[2025-10-16 13:37:20]     "exeErrorDiag": "",
[2025-10-16 13:37:20]     "pilotErrorCode": 0,
[2025-10-16 13:37:20]     "pilotErrorDiag": "",
[2025-10-16 13:37:20]  *** Listing of results directory ***
[2025-10-16 13:37:21] total 430116
[2025-10-16 13:37:21] -rw-r--r--. 1 boinc boinc    557409 Oct 15 11:36 pilot3.tar.gz
[2025-10-16 13:37:21] -rw-r--r--. 1 boinc boinc      5112 Oct 15 12:15 queuedata.json
[2025-10-16 13:37:21] -rwx------. 1 boinc boinc     36292 Oct 15 12:18 runpilot2-wrapper.sh
[2025-10-16 13:37:21] -rw-r--r--. 1 boinc boinc       100 Oct 16 09:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-16 13:37:21] -rwxr-xr-x. 1 boinc boinc      7986 Oct 16 09:17 run_atlas
[2025-10-16 13:37:21] -rw-r--r--. 1 boinc boinc       105 Oct 16 09:17 job.xml
[2025-10-16 13:37:21] -rw-r--r--. 2 boinc boinc 226351648 Oct 16 09:17 EVNT.46776529._000264.pool.root.1
[2025-10-16 13:37:21] -rw-r--r--. 1 boinc boinc      6391 Oct 16 09:17 init_data.xml
[2025-10-16 13:37:21] -rw-r--r--. 2 boinc boinc     15120 Oct 16 09:17 start_atlas.sh
[2025-10-16 13:37:21] drwxrwx--x. 2 boinc boinc        68 Oct 16 09:17 shared
[2025-10-16 13:37:21] -rw-r--r--. 2 boinc boinc    569680 Oct 16 09:17 input.tar.gz
[2025-10-16 13:37:21] -rw-r--r--. 1 boinc boinc         0 Oct 16 09:17 boinc_lockfile
[2025-10-16 13:37:21] -rw-r--r--. 1 boinc boinc      2558 Oct 16 09:17 pandaJob.out
[2025-10-16 13:37:21] -rw-------. 1 boinc boinc    973548 Oct 16 09:21 agis_schedconf.cvmfs.json
[2025-10-16 13:37:21] drwx------. 5 boinc boinc      4096 Oct 16 09:21 pilot3
[2025-10-16 13:37:21] -rw-------. 1 boinc boinc 205179530 Oct 16 13:33 HITS.46776533._005237.pool.root.1
[2025-10-16 13:37:21] -rw-r--r--. 1 boinc boinc       530 Oct 16 13:34 boinc_task_state.xml
[2025-10-16 13:37:21] -rw-------. 1 boinc boinc      1016 Oct 16 13:34 memory_monitor_summary.json
[2025-10-16 13:37:21] -rw-------. 1 boinc boinc   1560740 Oct 16 13:34 agis_ddmendpoints.agis.ALL.json
[2025-10-16 13:37:21] -rw-------. 1 boinc boinc    466816 Oct 16 13:34 log.46776533._005237.job.log.tgz.1
[2025-10-16 13:37:21] -rw-------. 1 boinc boinc        95 Oct 16 13:36 pilot_heartbeat.json
[2025-10-16 13:37:21] -rw-------. 1 boinc boinc      7774 Oct 16 13:36 heartbeat.json
[2025-10-16 13:37:21] -rw-r--r--. 1 boinc boinc      8192 Oct 16 13:36 boinc_mmap_file
[2025-10-16 13:37:21] -rw-r--r--. 1 boinc boinc        28 Oct 16 13:36 wrapper_checkpoint.txt
[2025-10-16 13:37:21] -rw-------. 1 boinc boinc      4883 Oct 16 13:37 pilotlog.txt
[2025-10-16 13:37:21] -rw-------. 1 boinc boinc   2047717 Oct 16 13:37 log.46776533._005237.job.log.1
[2025-10-16 13:37:21] -rw-------. 1 boinc boinc       357 Oct 16 13:37 output.list
[2025-10-16 13:37:21] -rw-r--r--. 1 boinc boinc       620 Oct 16 13:37 runtime_log
[2025-10-16 13:37:21] -rw-------. 1 boinc boinc   2529280 Oct 16 13:37 result.tar.gz
[2025-10-16 13:37:21] -rw-r--r--. 1 boinc boinc      8703 Oct 16 13:37 runtime_log.err
[2025-10-16 13:37:21] -rw-------. 1 boinc boinc       657 Oct 16 13:37 1bELDmElDT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvfnNDmjbcpyn.diag
[2025-10-16 13:37:21] -rw-r--r--. 1 boinc boinc     20608 Oct 16 13:37 stderr.txt
[2025-10-16 13:37:21] HITS file was successfully produced:
[2025-10-16 13:37:21] -rw-------. 1 boinc boinc 205179530 Oct 16 13:33 shared/HITS.pool.root.1
[2025-10-16 13:37:21]  *** Contents of shared directory: ***
[2025-10-16 13:37:21] total 424468
[2025-10-16 13:37:21] -rw-r--r--. 2 boinc boinc 226351648 Oct 16 09:17 ATLAS.root_0
[2025-10-16 13:37:21] -rw-r--r--. 2 boinc boinc     15120 Oct 16 09:17 start_atlas.sh
[2025-10-16 13:37:21] -rw-r--r--. 2 boinc boinc    569680 Oct 16 09:17 input.tar.gz
[2025-10-16 13:37:21] -rw-------. 1 boinc boinc 205179530 Oct 16 13:33 HITS.pool.root.1
[2025-10-16 13:37:21] -rw-------. 1 boinc boinc   2529280 Oct 16 13:37 result.tar.gz
13:37:22 (1919): run_atlas exited; CPU time 55704.954660
13:37:22 (1919): called boinc_finish(0)

</stderr_txt>
]]>

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