Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:35:15 (1938272): wrapper (7.7.26015): starting
21:35:15 (1938272): wrapper: running run_atlas (--nthreads 4)
[2025-10-20 21:35:15] Arguments: --nthreads 4
[2025-10-20 21:35:15] Threads: 4
[2025-10-20 21:35:15] Checking for CVMFS
[2025-10-20 21:35:15] No cvmfs_config command found, will try listing directly
[2025-10-20 21:35:15] CVMFS is ok
[2025-10-20 21:35:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-20 21:35:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-20 21:35:15] Further information can be found at the LHC@home message board.
[2025-10-20 21:35:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-20 21:35:15] Checking for apptainer binary...
[2025-10-20 21:35:15] which: no apptainer in ((null))
[2025-10-20 21:35:15] apptainer is not installed, using version from CVMFS
[2025-10-20 21:35:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-20 21:35:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot68/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-10-20 21:35:15] apptainer works
[2025-10-20 21:35:15] Set ATHENA_PROC_NUMBER=4
[2025-10-20 21:35:15] Set ATHENA_CORE_NUMBER=4
[2025-10-20 21:35:15] Starting ATLAS job with PandaID=6845724796
[2025-10-20 21:35:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot68/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
23:45:25 (2274702): wrapper (7.7.26015): starting
23:45:25 (2274702): wrapper: running run_atlas (--nthreads 4)
[2025-10-20 23:45:25] Arguments: --nthreads 4
[2025-10-20 23:45:25] Threads: 4
[2025-10-20 23:45:25] This job has been restarted, cleaning up previous attempt
[2025-10-20 23:45:25] Checking for CVMFS
[2025-10-20 23:45:25] No cvmfs_config command found, will try listing directly
[2025-10-20 23:45:25] CVMFS is ok
[2025-10-20 23:45:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-20 23:45:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-20 23:45:25] Further information can be found at the LHC@home message board.
[2025-10-20 23:45:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-20 23:45:25] Checking for apptainer binary...
[2025-10-20 23:45:25] which: no apptainer in ((null))
[2025-10-20 23:45:25] apptainer is not installed, using version from CVMFS
[2025-10-20 23:45:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-20 23:45:25] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot68/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-10-20 23:45:25] apptainer works
[2025-10-20 23:45:25] Set ATHENA_PROC_NUMBER=4
[2025-10-20 23:45:25] Set ATHENA_CORE_NUMBER=4
[2025-10-20 23:45:25] Starting ATLAS job with PandaID=6845724796
[2025-10-20 23:45:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot68/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 03:11:44]  *** The last 200 lines of the pilot log: ***
[2025-10-21 03:11:44] 2025-10-21 00:35:12,488 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-21 03:11:44] 2025-10-21 00:35:12,488 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 03:11:44] 2025-10-21 00:35:12,488 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 03:11:44] 2025-10-21 00:35:12,492 | INFO     | fitting pss+swap vs Time
[2025-10-21 03:11:44] 2025-10-21 00:35:12,492 | INFO     | sum of square deviations: 1444149868.0
[2025-10-21 03:11:44] 2025-10-21 00:35:12,493 | INFO     | sum of deviations: 7361281750.000011
[2025-10-21 03:11:44] 2025-10-21 00:35:12,493 | INFO     | mean x: 1761001834.0
[2025-10-21 03:11:44] 2025-10-21 00:35:12,493 | INFO     | mean y: 2312129.7724550897
[2025-10-21 03:11:44] 2025-10-21 00:35:12,493 | INFO     | -- intersect: -8974062794.7314
[2025-10-21 03:11:44] 2025-10-21 00:35:12,494 | INFO     | intersect: -8974062794.7314
[2025-10-21 03:11:44] 2025-10-21 00:35:12,494 | INFO     | chi2: 1.9532518791038629
[2025-10-21 03:11:44] 2025-10-21 00:35:12,494 | INFO     | sum of square deviations: 1318277740.5
[2025-10-21 03:11:44] 2025-10-21 00:35:12,495 | INFO     | sum of deviations: 16346035250.999998
[2025-10-21 03:11:44] 2025-10-21 00:35:12,495 | INFO     | mean x: 1761001681.5
[2025-10-21 03:11:44] 2025-10-21 00:35:12,495 | INFO     | mean y: 2322734.6913580247
[2025-10-21 03:11:44] 2025-10-21 00:35:12,495 | INFO     | -- intersect: -21833284951.40328
[2025-10-21 03:11:44] 2025-10-21 00:35:12,496 | INFO     | intersect: -21833284951.40328
[2025-10-21 03:11:44] 2025-10-21 00:35:12,496 | INFO     | chi2: 1.2987220276494749
[2025-10-21 03:11:44] 2025-10-21 00:35:12,496 | INFO     | current chi2=1.2987220276494749 (change=33.509751530595295 %)
[2025-10-21 03:11:44] 2025-10-21 00:35:12,496 | INFO     | sum of square deviations: 1199940638.0
[2025-10-21 03:11:44] 2025-10-21 00:35:12,497 | INFO     | sum of deviations: 15641080699.000002
[2025-10-21 03:11:44] 2025-10-21 00:35:12,497 | INFO     | mean x: 1761001529.0
[2025-10-21 03:11:44] 2025-10-21 00:35:12,497 | INFO     | mean y: 2321827.0445859875
[2025-10-21 03:11:44] 2025-10-21 00:35:12,498 | INFO     | -- intersect: -22952119546.0389
[2025-10-21 03:11:44] 2025-10-21 00:35:12,498 | INFO     | intersect: -22952119546.0389
[2025-10-21 03:11:44] 2025-10-21 00:35:12,498 | INFO     | chi2: 1.299897147153976
[2025-10-21 03:11:44] 2025-10-21 00:35:12,498 | INFO     | current chi2=1.299897147153976 (change=-0.09048275762504235 %)
[2025-10-21 03:11:44] 2025-10-21 00:35:12,498 | INFO     | right removable region: 156
[2025-10-21 03:11:44] 2025-10-21 00:35:12,498 | INFO     | sum of square deviations: 1318277740.5
[2025-10-21 03:11:44] 2025-10-21 00:35:12,499 | INFO     | sum of deviations: -12658303797.0
[2025-10-21 03:11:44] 2025-10-21 00:35:12,499 | INFO     | mean x: 1761001986.5
[2025-10-21 03:11:44] 2025-10-21 00:35:12,500 | INFO     | mean y: 2335988.3086419753
[2025-10-21 03:11:44] 2025-10-21 00:35:12,500 | INFO     | -- intersect: 16911745475.707546
[2025-10-21 03:11:44] 2025-10-21 00:35:12,500 | INFO     | intersect: 16911745475.707546
[2025-10-21 03:11:44] 2025-10-21 00:35:12,500 | INFO     | chi2: 0.6864374783302358
[2025-10-21 03:11:44] 2025-10-21 00:35:12,500 | INFO     | current chi2=0.6864374783302358 (change=64.85668409313558 %)
[2025-10-21 03:11:44] 2025-10-21 00:35:12,500 | INFO     | sum of square deviations: 1199940638.0
[2025-10-21 03:11:44] 2025-10-21 00:35:12,501 | INFO     | sum of deviations: -11397237560.0
[2025-10-21 03:11:44] 2025-10-21 00:35:12,501 | INFO     | mean x: 1761002139.0
[2025-10-21 03:11:44] 2025-10-21 00:35:12,502 | INFO     | mean y: 2334353.4522292996
[2025-10-21 03:11:44] 2025-10-21 00:35:12,502 | INFO     | -- intersect: 16728628210.208117
[2025-10-21 03:11:44] 2025-10-21 00:35:12,502 | INFO     | intersect: 16728628210.208117
[2025-10-21 03:11:44] 2025-10-21 00:35:12,502 | INFO     | chi2: 0.6859531324316659
[2025-10-21 03:11:44] 2025-10-21 00:35:12,502 | INFO     | current chi2=0.6859531324316659 (change=0.0705593610284964 %)
[2025-10-21 03:11:44] 2025-10-21 00:35:12,502 | INFO     | left removable region: 20
[2025-10-21 03:11:44] 2025-10-21 00:35:12,502 | INFO     | sum of square deviations: 779958810.0
[2025-10-21 03:11:44] 2025-10-21 00:35:12,503 | INFO     | sum of deviations: 905131999.5
[2025-10-21 03:11:44] 2025-10-21 00:35:12,503 | INFO     | mean x: 1761002108.5
[2025-10-21 03:11:44] 2025-10-21 00:35:12,503 | INFO     | mean y: 2340580.257352941
[2025-10-21 03:11:44] 2025-10-21 00:35:12,504 | INFO     | -- intersect: -2041279338.0692585
[2025-10-21 03:11:44] 2025-10-21 00:35:12,504 | INFO     | intersect: -2041279338.0692585
[2025-10-21 03:11:44] 2025-10-21 00:35:12,504 | INFO     | chi2: 0.0008826620653013958
[2025-10-21 03:11:44] 2025-10-21 00:35:12,504 | INFO     | -- intersect: -2041279338.0692585
[2025-10-21 03:11:44] 2025-10-21 00:35:12,504 | INFO     | current memory leak: 1.16 B/s (using 136 data points, chi2=0.00)
[2025-10-21 03:11:44] 2025-10-21 00:35:12,504 | INFO     | could have reported an average CPU frequency of 2690 MHz (9 samples)
[2025-10-21 03:11:44] 2025-10-21 00:35:12,505 | INFO     | ..............................
[2025-10-21 03:11:44] 2025-10-21 00:35:12,505 | INFO     | . Timing measurements:
[2025-10-21 03:11:44] 2025-10-21 00:35:12,505 | INFO     | . get job = 0 s
[2025-10-21 03:11:44] 2025-10-21 00:35:12,505 | INFO     | . initial setup = 1 s
[2025-10-21 03:11:44] 2025-10-21 00:35:12,505 | INFO     | . payload setup = 8 s
[2025-10-21 03:11:44] 2025-10-21 00:35:12,505 | INFO     | . stage-in = 0 s
[2025-10-21 03:11:44] 2025-10-21 00:35:12,505 | INFO     | . payload execution = 10133 s
[2025-10-21 03:11:44] 2025-10-21 00:35:12,505 | INFO     | . stage-out = 1 s
[2025-10-21 03:11:44] 2025-10-21 00:35:12,505 | INFO     | . log creation = 0 s
[2025-10-21 03:11:44] 2025-10-21 00:35:12,505 | INFO     | ..............................
[2025-10-21 03:11:44] 2025-10-21 00:35:13,021 | INFO     | 
[2025-10-21 03:11:44] 2025-10-21 00:35:13,022 | INFO     | job summary report
[2025-10-21 03:11:44] 2025-10-21 00:35:13,022 | INFO     | --------------------------------------------------
[2025-10-21 03:11:44] 2025-10-21 00:35:13,022 | INFO     | PanDA job id: 6845724796
[2025-10-21 03:11:44] 2025-10-21 00:35:13,022 | INFO     | task id: 46776533
[2025-10-21 03:11:44] 2025-10-21 00:35:13,023 | INFO     | errors: (none)
[2025-10-21 03:11:44] 2025-10-21 00:35:13,023 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 03:11:44] 2025-10-21 00:35:13,023 | INFO     | pilot state: finished 
[2025-10-21 03:11:44] 2025-10-21 00:35:13,023 | INFO     | transexitcode: 0
[2025-10-21 03:11:44] 2025-10-21 00:35:13,023 | INFO     | exeerrorcode: 0
[2025-10-21 03:11:44] 2025-10-21 00:35:13,023 | INFO     | exeerrordiag: 
[2025-10-21 03:11:44] 2025-10-21 00:35:13,023 | INFO     | exitcode: 0
[2025-10-21 03:11:44] 2025-10-21 00:35:13,023 | INFO     | exitmsg: OK
[2025-10-21 03:11:44] 2025-10-21 00:35:13,023 | INFO     | cpuconsumptiontime: 38772 s
[2025-10-21 03:11:44] 2025-10-21 00:35:13,023 | INFO     | nevents: 400
[2025-10-21 03:11:44] 2025-10-21 00:35:13,023 | INFO     | neventsw: 0
[2025-10-21 03:11:44] 2025-10-21 00:35:13,024 | INFO     | pid: 2286039
[2025-10-21 03:11:44] 2025-10-21 00:35:13,024 | INFO     | pgrp: 2286039
[2025-10-21 03:11:44] 2025-10-21 00:35:13,024 | INFO     | corecount: 4
[2025-10-21 03:11:44] 2025-10-21 00:35:13,024 | INFO     | event service: False
[2025-10-21 03:11:44] 2025-10-21 00:35:13,024 | INFO     | sizes: {0: 2348938, 1: 2348966, 7: 2349228, 11: 2349256, 10146: 2378416, 10147: 2387620, 10157: 2387822}
[2025-10-21 03:11:44] 2025-10-21 00:35:13,024 | INFO     | --------------------------------------------------
[2025-10-21 03:11:44] 2025-10-21 00:35:13,024 | INFO     | 
[2025-10-21 03:11:44] 2025-10-21 00:35:13,024 | INFO     | executing command: ls -lF /scratch/boinc/var/slot68/slots/0
[2025-10-21 03:11:44] 2025-10-21 00:35:13,057 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 03:11:44] 2025-10-21 00:35:13,057 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 03:11:44] 2025-10-21 00:35:13,058 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 03:11:44] 2025-10-21 00:35:13,058 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 03:11:44] 2025-10-21 00:35:13,058 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 03:11:44] 2025-10-21 00:35:13,058 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 03:11:44] 2025-10-21 00:35:13,058 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 03:11:44] 2025-10-21 00:35:13,058 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 03:11:44] 2025-10-21 00:35:13,058 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 03:11:44] 2025-10-21 00:35:13,058 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 03:11:44] 2025-10-21 00:35:13,058 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 03:11:44] 2025-10-21 00:35:13,058 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 03:11:44] 2025-10-21 00:35:13,058 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 03:11:44] 2025-10-21 00:35:13,059 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 03:11:44] 2025-10-21 00:35:13,059 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 03:11:44] 2025-10-21 00:35:13,059 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 03:11:44] 2025-10-21 00:35:13,059 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 03:11:44] 2025-10-21 00:35:13,059 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 03:11:44] 2025-10-21 00:35:13,059 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 03:11:44] 2025-10-21 00:35:13,059 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 03:11:44] 2025-10-21 00:35:13,059 | INFO     | job 6845724796 has completed (purged errors)
[2025-10-21 03:11:44] 2025-10-21 00:35:13,059 | INFO     | overall cleanup function is called
[2025-10-21 03:11:44] 2025-10-21 00:35:14,068 | INFO     | --- collectZombieJob: --- 10, [2286039]
[2025-10-21 03:11:44] 2025-10-21 00:35:14,068 | INFO     | zombie collector waiting for pid 2286039
[2025-10-21 03:11:44] 2025-10-21 00:35:14,068 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 03:11:44] 2025-10-21 00:35:14,068 | INFO     | collected zombie processes
[2025-10-21 03:11:44] 2025-10-21 00:35:14,068 | INFO     | will attempt to kill all subprocesses of pid=2286039
[2025-10-21 03:11:44] 2025-10-21 00:35:14,868 | INFO     | process IDs to be killed: [2286039] (in reverse order)
[2025-10-21 03:11:44] 2025-10-21 00:35:15,129 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 03:11:44] 2025-10-21 00:35:15,132 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 03:11:44] 2025-10-21 00:35:15,167 | INFO     | did not find any defunct processes belonging to 2286039
[2025-10-21 03:11:44] 2025-10-21 00:35:15,200 | INFO     | did not find any defunct processes belonging to 2286039
[2025-10-21 03:11:44] 2025-10-21 00:35:15,200 | INFO     | ready for new job
[2025-10-21 03:11:44] 2025-10-21 00:35:15,201 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 03:11:44] 2025-10-21 00:35:15,203 | INFO     | ***************************************
[2025-10-21 03:11:44] 2025-10-21 00:35:15,203 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 03:11:44] 2025-10-21 00:35:15,203 | INFO     | ***************************************
[2025-10-21 03:11:44] 2025-10-21 00:35:15,203 | INFO     | 
[2025-10-21 03:11:44] 2025-10-21 00:35:15,212 | INFO     | architecture information:
[2025-10-21 03:11:44] 2025-10-21 00:35:15,212 | INFO     | executing command: cat /etc/os-release
[2025-10-21 03:11:44] 2025-10-21 00:35:15,237 | INFO     | cat /etc/os-release:
[2025-10-21 03:11:44] NAME="CentOS Linux"
[2025-10-21 03:11:44] VERSION="7 (Core)"
[2025-10-21 03:11:44] ID="centos"
[2025-10-21 03:11:44] ID_LIKE="rhel fedora"
[2025-10-21 03:11:44] VERSION_ID="7"
[2025-10-21 03:11:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 03:11:44] ANSI_COLOR="0;31"
[2025-10-21 03:11:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 03:11:44] HOME_URL="https://www.centos.org/"
[2025-10-21 03:11:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 03:11:44] 
[2025-10-21 03:11:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 03:11:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 03:11:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 03:11:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 03:11:44] 
[2025-10-21 03:11:44] 2025-10-21 00:35:15,237 | INFO     | ***************************************
[2025-10-21 03:11:44] 2025-10-21 00:35:15,740 | INFO     | executing command: df -mP /scratch/boinc/var/slot68/slots/0
[2025-10-21 03:11:44] 2025-10-21 00:35:15,766 | INFO     | sufficient remaining disk space (3354080051200 B)
[2025-10-21 03:11:44] 2025-10-21 00:35:15,766 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 03:11:44] 2025-10-21 00:35:15,766 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 03:11:44] 2025-10-21 00:35:15,766 | INFO     | update_server=False
[2025-10-21 03:11:44] 2025-10-21 00:35:15,767 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 03:11:44] 2025-10-21 00:35:15,767 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 03:11:44] 2025-10-21 00:35:15,767 | INFO     | aborting loop
[2025-10-21 03:11:44] 2025-10-21 00:35:16,083 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 03:11:44] 2025-10-21 00:35:16,280 | INFO     | all data control threads have been joined
[2025-10-21 03:11:44] 2025-10-21 00:35:16,383 | INFO     | all payload control threads have been joined
[2025-10-21 03:11:44] 2025-10-21 00:35:16,383 | INFO     | all job control threads have been joined
[2025-10-21 03:11:44] 2025-10-21 00:35:16,771 | INFO     | [job] job monitor thread has finished
[2025-10-21 03:11:44] 2025-10-21 00:35:16,774 | INFO     | [job] retrieve thread has finished
[2025-10-21 03:11:44] 2025-10-21 00:35:16,838 | INFO     | [job] validate thread has finished
[2025-10-21 03:11:44] 2025-10-21 00:35:17,093 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 03:11:44] 2025-10-21 00:35:17,181 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 03:11:44] 2025-10-21 00:35:17,285 | INFO     | [data] control thread has finished
[2025-10-21 03:11:44] 2025-10-21 00:35:17,294 | INFO     | [payload] validate_post thread has finished
[2025-10-21 03:11:44] 2025-10-21 00:35:17,388 | INFO     | [payload] control thread has finished
[2025-10-21 03:11:44] 2025-10-21 00:35:17,389 | INFO     | [job] control thread has finished
[2025-10-21 03:11:44] 2025-10-21 00:35:17,529 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 03:11:44] 2025-10-21 00:35:17,615 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 03:11:44] 2025-10-21 00:35:17,647 | INFO     | [data] copytool_in thread has finished
[2025-10-21 03:11:44] 2025-10-21 00:35:17,837 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 03:11:44] 2025-10-21 00:35:18,088 | INFO     | [data] copytool_out thread has finished
[2025-10-21 03:11:44] 2025-10-21 00:35:18,151 | INFO     | [payload] failed_post thread has finished
[2025-10-21 03:11:44] 2025-10-21 00:35:18,203 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 03:11:44] 2025-10-21 00:35:18,620 | INFO     | [job] queue monitor thread has finished
[2025-10-21 03:11:44] 2025-10-21 00:35:22,208 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 03:11:44] 2025-10-21 00:35:46,236 | INFO     | PID=2278703 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-21 03:11:44] 2025-10-21 00:35:46,237 | INFO     | .. there are 11 such processes running
[2025-10-21 03:11:44] 2025-10-21 00:35:46,237 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 03:11:44] 2025-10-21 00:35:46,237 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 03:11:44] 2025-10-21 00:35:46,237 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 03:11:44] 2025-10-21 00:35:54,521 | INFO     | [monitor] cgroup control has ended
[2025-10-21 03:11:44] 2025-10-21 00:35:54,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23264324392768)>', '<ExcThread(monitor, started 23263885379328)>']
[2025-10-21 03:11:44] 2025-10-21 00:35:55,267 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 03:11:44] 2025-10-21 00:35:55,267 | INFO     | [monitor] control thread has ended
[2025-10-21 03:11:44] 2025-10-21 00:35:59,702 | INFO     | all workflow threads have been joined
[2025-10-21 03:11:44] 2025-10-21 00:35:59,702 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 03:11:44] 2025-10-21 00:35:59,702 | INFO     | traces error code: 0
[2025-10-21 03:11:44] 2025-10-21 00:35:59,703 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 03:11:44] 2025-10-21 00:35:59,870 [wrapper] ==== pilot stdout END ====
[2025-10-21 03:11:44] 2025-10-21 00:35:59,875 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 03:11:44] 2025-10-21 00:35:59,879 [wrapper] pilotpid: 2278703
[2025-10-21 03:11:44] 2025-10-21 00:35:59,883 [wrapper] Pilot exit status: 0
[2025-10-21 03:11:44] 2025-10-21 00:35:59,899 [wrapper] pandaids: 6845724796 6845724796
[2025-10-21 03:11:44] 2025-10-21 00:36:00,075 [wrapper] cleanup supervisor_pilot 2704737 2278704
[2025-10-21 03:11:44] 2025-10-21 00:36:00,079 [wrapper] Test setup, not cleaning
[2025-10-21 03:11:44] 2025-10-21 00:36:00,083 [wrapper] apfmon messages muted
[2025-10-21 03:11:44] 2025-10-21 00:36:00,087 [wrapper] ==== wrapper stdout END ====
[2025-10-21 03:11:44] 2025-10-21 00:36:00,091 [wrapper] ==== wrapper stderr END ====
[2025-10-21 03:11:44]  *** Error codes and diagnostics ***
[2025-10-21 03:11:44]     "exeErrorCode": 0,
[2025-10-21 03:11:44]     "exeErrorDiag": "",
[2025-10-21 03:11:44]     "pilotErrorCode": 0,
[2025-10-21 03:11:44]     "pilotErrorDiag": "",
[2025-10-21 03:11:44]  *** Listing of results directory ***
[2025-10-21 03:11:44] total 664816
[2025-10-21 03:11:44] drwx------ 5 boinc boinc      4096 Oct  7 09:00 pilot3
[2025-10-21 03:11:44] -rw-r--r-- 1 boinc boinc    557409 Oct 15 12:30 pilot3.tar.gz
[2025-10-21 03:11:44] -rw-r--r-- 1 boinc boinc      5112 Oct 15 13:04 queuedata.json
[2025-10-21 03:11:44] -rwx------ 1 boinc boinc     36292 Oct 15 13:06 runpilot2-wrapper.sh
[2025-10-21 03:11:44] -rw-r--r-- 1 boinc boinc       100 Oct 20 21:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 03:11:44] -rwxr-xr-x 1 boinc boinc      7986 Oct 20 21:35 run_atlas
[2025-10-21 03:11:44] -rw-r--r-- 1 boinc boinc       105 Oct 20 21:35 job.xml
[2025-10-21 03:11:44] -rw-r--r-- 3 boinc boinc 230852116 Oct 20 21:35 EVNT.46776529._000320.pool.root.1
[2025-10-21 03:11:44] -rw-r--r-- 3 boinc boinc 230852116 Oct 20 21:35 ATLAS.root_0
[2025-10-21 03:11:44] -rw-r--r-- 2 boinc boinc     15120 Oct 20 21:35 start_atlas.sh
[2025-10-21 03:11:44] drwxrwx--x 2 boinc boinc      4096 Oct 20 21:35 shared
[2025-10-21 03:11:44] -rw-r--r-- 2 boinc boinc    569683 Oct 20 21:35 input.tar.gz
[2025-10-21 03:11:44] -rw-r--r-- 1 boinc boinc         0 Oct 20 21:35 boinc_lockfile
[2025-10-21 03:11:44] -rw-r--r-- 1 boinc boinc      2559 Oct 20 23:45 pandaJob.out
[2025-10-21 03:11:44] -rw------- 1 boinc boinc    978846 Oct 20 23:45 agis_schedconf.cvmfs.json
[2025-10-21 03:11:44] -rw------- 1 boinc boinc 211635171 Oct 21 02:34 HITS.46776533._006630.pool.root.1
[2025-10-21 03:11:44] -rw-r--r-- 1 boinc boinc       528 Oct 21 02:34 boinc_task_state.xml
[2025-10-21 03:11:44] -rw------- 1 boinc boinc      1027 Oct 21 02:34 memory_monitor_summary.json
[2025-10-21 03:11:44] -rw------- 1 boinc boinc   1560740 Oct 21 02:35 agis_ddmendpoints.agis.ALL.json
[2025-10-21 03:11:44] -rw------- 1 boinc boinc    332881 Oct 21 02:35 log.46776533._006630.job.log.tgz.1
[2025-10-21 03:11:44] -rw------- 1 boinc boinc        97 Oct 21 02:35 pilot_heartbeat.json
[2025-10-21 03:11:44] -rw------- 1 boinc boinc      7782 Oct 21 02:35 heartbeat.json
[2025-10-21 03:11:44] -rw------- 1 boinc boinc      4835 Oct 21 02:35 pilotlog.txt
[2025-10-21 03:11:44] -rw------- 1 boinc boinc   1425315 Oct 21 02:36 log.46776533._006630.job.log.1
[2025-10-21 03:11:44] -rw------- 1 boinc boinc       357 Oct 21 02:36 output.list
[2025-10-21 03:11:44] -rw-r--r-- 1 boinc boinc       620 Oct 21 02:36 runtime_log
[2025-10-21 03:11:44] -rw------- 1 boinc boinc   1781760 Oct 21 02:36 result.tar.gz
[2025-10-21 03:11:44] -rw------- 1 boinc boinc       790 Oct 21 02:36 t5NNDmMWET8n9Rq4apOajLDm4fhM0noT9bVof3QYDmcWWMDmxC4JVo.diag
[2025-10-21 03:11:44] -rw-r--r-- 1 boinc boinc      9147 Oct 21 02:36 runtime_log.err
[2025-10-21 03:11:44] -rw-r--r-- 1 boinc boinc      6691 Oct 21 02:36 init_data.xml
[2025-10-21 03:11:44] -rw-r--r-- 1 boinc boinc        26 Oct 21 03:11 wrapper_checkpoint.txt
[2025-10-21 03:11:44] -rw-r--r-- 1 boinc boinc      8192 Oct 21 03:11 boinc_mmap_file
[2025-10-21 03:11:44] -rw-r--r-- 1 boinc boinc     22577 Oct 21 03:11 stderr.txt
[2025-10-21 03:11:44] HITS file was successfully produced:
[2025-10-21 03:11:44] -rw------- 1 boinc boinc 211635171 Oct 21 02:34 shared/HITS.pool.root.1
[2025-10-21 03:11:44]  *** Contents of shared directory: ***
[2025-10-21 03:11:44] total 434444
[2025-10-21 03:11:44] -rw-r--r-- 3 boinc boinc 230852116 Oct 20 21:35 ATLAS.root_0
[2025-10-21 03:11:44] -rw-r--r-- 2 boinc boinc     15120 Oct 20 21:35 start_atlas.sh
[2025-10-21 03:11:44] -rw-r--r-- 2 boinc boinc    569683 Oct 20 21:35 input.tar.gz
[2025-10-21 03:11:44] -rw------- 1 boinc boinc 211635171 Oct 21 02:34 HITS.pool.root.1
[2025-10-21 03:11:44] -rw------- 1 boinc boinc   1781760 Oct 21 02:36 result.tar.gz
03:11:45 (2274702): run_atlas exited; CPU time 39435.313356
03:11:45 (2274702): called boinc_finish(0)

</stderr_txt>
]]>

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