Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-15 13:47:54 (33656): vboxwrapper version 26210
2025-10-15 13:47:54 (33656): BOINC client version: 8.0.2
2025-10-15 13:47:56 (33656): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-10-15 13:47:56 (33656): Successfully copied 'init_data.xml' to the shared directory.
2025-10-15 13:47:56 (33656): Create VM. (boinc_0c6ebb9b03e8fa5e, slot#2)
2025-10-15 13:47:57 (33656): Setting Memory Size for VM. (4800MB)
2025-10-15 13:47:57 (33656): Setting CPU Count for VM. (8)
2025-10-15 13:47:57 (33656): Setting Chipset Options for VM.
2025-10-15 13:47:58 (33656): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-15 13:47:58 (33656): Setting Boot Options for VM.
2025-10-15 13:47:58 (33656): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-15 13:47:59 (33656): Enabling VM Network Access.
2025-10-15 13:47:59 (33656): Disabling USB Support for VM.
2025-10-15 13:47:59 (33656): Disabling COM Port Support for VM.
2025-10-15 13:48:00 (33656): Disabling LPT Port Support for VM.
2025-10-15 13:48:00 (33656): Disabling Audio Support for VM.
2025-10-15 13:48:00 (33656): Disabling Clipboard Support for VM.
2025-10-15 13:48:00 (33656): Disabling Drag and Drop Support for VM.
2025-10-15 13:48:01 (33656): Adding storage controller(s) to VM.
2025-10-15 13:48:01 (33656): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-15 13:48:03 (33656): Adding VirtualBox Guest Additions to VM.
2025-10-15 13:48:03 (33656): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-15 13:48:04 (33656): forwarding host port 59733 to guest port 80
2025-10-15 13:48:04 (33656): Enabling remote desktop for VM.
2025-10-15 13:48:04 (33656): Required extension pack not installed, remote desktop not enabled.
2025-10-15 13:48:04 (33656): Enabling shared directory for VM.
2025-10-15 13:48:05 (33656): Starting VM using VBoxManage interface. (boinc_0c6ebb9b03e8fa5e, slot#2)
2025-10-15 13:48:14 (33656): Successfully started VM. (PID = '41060')
2025-10-15 13:48:14 (33656): Reporting VM Process ID to BOINC.
2025-10-15 13:48:14 (33656): Guest Log: BIOS: VirtualBox 7.0.6
2025-10-15 13:48:14 (33656): Guest Log: CPUID EDX: 0x178bfbff
2025-10-15 13:48:14 (33656): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-15 13:48:14 (33656): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-15 13:48:14 (33656): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-15 13:48:14 (33656): Detected: Web Application Enabled (http://localhost:59733)
2025-10-15 13:48:14 (33656): Preference change detected
2025-10-15 13:48:14 (33656): Setting CPU throttle for VM. (100%)
2025-10-15 13:48:15 (33656): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-15 13:48:16 (33656): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-15 13:48:16 (33656): Guest Log: BIOS: Booting from Hard Disk...
2025-10-15 13:48:20 (33656): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-15 13:48:20 (33656): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-15 13:48:20 (33656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-15 13:48:29 (33656): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-15 13:48:29 (33656): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-15 13:48:48 (33656): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-15 13:48:48 (33656): Guest Log: 00:00:00.000616 main     Log opened 2025-10-15T13:48:46.302106000Z
2025-10-15 13:48:48 (33656): Guest Log: 00:00:00.000978 main     OS Product: Linux
2025-10-15 13:48:48 (33656): Guest Log: 00:00:00.001082 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-15 13:48:48 (33656): Guest Log: 00:00:00.001174 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-15 13:48:48 (33656): Guest Log: 00:00:00.001397 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-15 13:48:48 (33656): Guest Log: 00:00:00.001401 main     Process ID: 1375
2025-10-15 13:48:48 (33656): Guest Log: 00:00:00.001405 main     Package type: LINUX_64BITS_GENERIC
2025-10-15 13:48:48 (33656): Guest Log: 00:00:00.003216 main     5.2.32 r132073 started. Verbose level = 0
2025-10-15 13:48:48 (33656): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-15 13:48:48 (33656): Guest Log: [INFO] Mounting shared directory
2025-10-15 13:48:48 (33656): Guest Log: [INFO] Checking for init_data.xml
2025-10-15 13:48:55 (33656): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-15 13:48:55 (33656): Guest Log: [INFO] Detected branch: prod
2025-10-15 13:48:55 (33656): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-15 13:48:55 (33656): Guest Log: Copying input files
2025-10-15 13:48:58 (33656): Guest Log: 00:00:10.007408 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 458 723 000ns (GuestNow=1 760 528 937 849 060 000 ns GuestLast=1 760 536 126 307 783 000 ns fSetTimeLastLoop=true )
2025-10-15 13:48:58 (33656): Guest Log: Copied input files into RunAtlas.
2025-10-15 13:48:58 (33656): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-15 13:48:58 (33656): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-15 13:48:58 (33656): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-15 13:48:58 (33656): Guest Log: Further information can be found at the LHC@home message board.
2025-10-15 13:49:08 (33656): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-15 13:49:09 (33656): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-15 13:49:09 (33656): Guest Log: 2.6.3.0 1653 0 32152 151733 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-15 13:49:11 (33656): Guest Log: copied the webapp to /var/www
2025-10-15 13:49:11 (33656): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-15 13:49:11 (33656): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-15 13:49:12 (33656): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-15 13:49:12 (33656): Guest Log:  *** Starting ATLAS job. (PandaID=6845695578 taskID=46776533) ***
2025-10-15 15:28:30 (33656): Status Report: Elapsed Time: '6000.000000'
2025-10-15 15:28:30 (33656): Status Report: CPU Time: '35631.718750'
2025-10-15 17:08:46 (33656): Status Report: Elapsed Time: '12000.000000'
2025-10-15 17:08:46 (33656): Status Report: CPU Time: '83025.937500'
2025-10-15 18:48:53 (33656): Status Report: Elapsed Time: '18000.000000'
2025-10-15 18:48:53 (33656): Status Report: CPU Time: '130232.390625'
2025-10-15 19:28:32 (33656): Guest Log:  *** Job finished ***
2025-10-15 19:28:32 (33656): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-15 19:28:32 (33656): Guest Log: 2025-10-15 17:28:13,932 | INFO     | all workflow threads have been joined
2025-10-15 19:28:32 (33656): Guest Log: 2025-10-15 17:28:13,932 | INFO     | end of generic workflow (traces error code: 0)
2025-10-15 19:28:32 (33656): Guest Log: 2025-10-15 17:28:13,933 | INFO     | traces error code: 0
2025-10-15 19:28:32 (33656): Guest Log: 2025-10-15 17:28:13,934 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-15 19:28:32 (33656): Guest Log: 2025-10-15 17:28:29,743 | INFO     | PID=6115 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-15 19:28:32 (33656): Guest Log: 2025-10-15 17:28:29,746 | INFO     | found 0 job(s) in 20 queues
2025-10-15 19:28:32 (33656): Guest Log: 2025-10-15 17:28:29,746 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-15 19:28:32 (33656): Guest Log: 2025-10-15 17:28:29,746 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-15 19:28:32 (33656): Guest Log: 2025-10-15 17:28:29,747 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-15 19:28:32 (33656): Guest Log: 2025-10-15 17:28:29,747 | INFO     | [monitor] control thread has ended
2025-10-15 19:28:32 (33656): Guest Log: 2025-10-15 17:28:29,988 [wrapper] ==== pilot stdout END ====
2025-10-15 19:28:32 (33656): Guest Log: 2025-10-15 17:28:30,002 [wrapper] ==== wrapper stdout RESUME ====
2025-10-15 19:28:32 (33656): Guest Log: 2025-10-15 17:28:30,016 [wrapper] pilotpid: 6115
2025-10-15 19:28:32 (33656): Guest Log: 2025-10-15 17:28:30,030 [wrapper] Pilot exit status: 0
2025-10-15 19:28:32 (33656): Guest Log: 2025-10-15 17:28:30,826 [wrapper] pandaids: 6845695578
2025-10-15 19:28:32 (33656): Guest Log: 2025-10-15 17:28:30,932 [wrapper] cleanup supervisor_pilot 22051 6116
2025-10-15 19:28:32 (33656): Guest Log: 2025-10-15 17:28:30,950 [wrapper] Test setup, not cleaning
2025-10-15 19:28:32 (33656): Guest Log: 2025-10-15 17:28:30,969 [wrapper] apfmon messages muted
2025-10-15 19:28:32 (33656): Guest Log: 2025-10-15 17:28:30,985 [wrapper] ==== wrapper stdout END ====
2025-10-15 19:28:32 (33656): Guest Log: 2025-10-15 17:28:30,999 [wrapper] ==== wrapper stderr END ====
2025-10-15 19:28:32 (33656): Guest Log:  *** Error codes and diagnostics ***
2025-10-15 19:28:32 (33656): Guest Log:     "exeErrorCode": 0,
2025-10-15 19:28:32 (33656): Guest Log:     "exeErrorDiag": "",
2025-10-15 19:28:32 (33656): Guest Log:     "pilotErrorCode": 0,
2025-10-15 19:28:32 (33656): Guest Log:     "pilotErrorDiag": "",
2025-10-15 19:28:32 (33656): Guest Log:  *** Listing of results directory ***
2025-10-15 19:28:32 (33656): Guest Log: total 207740
2025-10-15 19:28:32 (33656): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 15 09:36 pilot3.tar.gz
2025-10-15 19:28:32 (33656): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 15 09:46 queuedata.json
2025-10-15 19:28:32 (33656): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 15 09:47 runpilot2-wrapper.sh
2025-10-15 19:28:32 (33656): Guest Log: -rwxr-xr-x. 1 atlas atlas      9072 Oct 15 11:48 init_data.xml
2025-10-15 19:28:32 (33656): Guest Log: -rwxr-xr-x. 1 atlas atlas    569690 Oct 15 11:48 input.tar.gz
2025-10-15 19:28:32 (33656): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 15 11:48 start_atlas.sh
2025-10-15 19:28:32 (33656): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 15 11:48 EVNT.46776529._000209.pool.root.1 -> /data/./ATLAS.root_0
2025-10-15 19:28:32 (33656): Guest Log: -rw-r--r--. 1 atlas atlas      2561 Oct 15 11:49 pandaJob.out
2025-10-15 19:28:32 (33656): Guest Log: -rw-------. 1 atlas atlas    974024 Oct 15 11:51 agis_schedconf.cvmfs.json
2025-10-15 19:28:32 (33656): Guest Log: drwx------. 5 atlas atlas      4096 Oct 15 11:51 pilot3
2025-10-15 19:28:32 (33656): Guest Log: -rw-------. 1 atlas atlas 202667711 Oct 15 17:26 HITS.46776533._003867.pool.root.1
2025-10-15 19:28:32 (33656): Guest Log: -rw-------. 1 atlas atlas      1034 Oct 15 17:27 memory_monitor_summary.json
2025-10-15 19:28:32 (33656): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 15 17:27 agis_ddmendpoints.agis.ALL.json
2025-10-15 19:28:32 (33656): Guest Log: -rw-------. 1 atlas atlas    537175 Oct 15 17:27 log.46776533._003867.job.log.tgz.1
2025-10-15 19:28:32 (33656): Guest Log: -rw-------. 1 atlas atlas      7838 Oct 15 17:27 heartbeat.json
2025-10-15 19:28:32 (33656): Guest Log: -rw-------. 1 atlas atlas        95 Oct 15 17:28 pilot_heartbeat.json
2025-10-15 19:28:32 (33656): Guest Log: -rw-------. 1 atlas atlas       744 Oct 15 17:28 pilotlog.txt
2025-10-15 19:28:32 (33656): Guest Log: -rw-------. 1 atlas atlas   2578814 Oct 15 17:28 log.46776533._003867.job.log.1
2025-10-15 19:28:32 (33656): Guest Log: -rw-------. 1 atlas atlas       357 Oct 15 17:28 output.list
2025-10-15 19:28:32 (33656): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 15 17:28 runtime_log
2025-10-15 19:28:32 (33656): Guest Log: -rw-------. 1 atlas atlas   3133440 Oct 15 17:28 result.tar.gz
2025-10-15 19:28:32 (33656): Guest Log: -rw-r--r--. 1 atlas atlas      8649 Oct 15 17:28 runtime_log.err
2025-10-15 19:28:32 (33656): Guest Log: -rw-------. 1 atlas atlas       662 Oct 15 17:28 86UKDmlHDT8n9Rq4apOajLDm4fhM0noT9bVof3QYDmNDWMDmUrkSwn.diag
2025-10-15 19:28:32 (33656): Guest Log: Looking for outputfile HITS.46776533._003867.pool.root.1
2025-10-15 19:28:32 (33656): Guest Log: HITS file was successfully produced
2025-10-15 19:28:32 (33656): Guest Log: -rw-------. 1 atlas atlas 202667711 Oct 15 17:26 /home/atlas/RunAtlas/HITS.46776533._003867.pool.root.1
2025-10-15 19:28:35 (33656): Guest Log: Successfully finished the ATLAS job!
2025-10-15 19:28:35 (33656): Guest Log: Copying the results back to the shared directory!
2025-10-15 19:28:35 (33656): Guest Log:  *** Contents of shared directory: ***
2025-10-15 19:28:35 (33656): Guest Log: total 423620
2025-10-15 19:28:35 (33656): Guest Log: -rwxrwxrwx. 1 root root 227379135 Oct 15 11:47 ATLAS.root_0
2025-10-15 19:28:35 (33656): Guest Log: -rwxrwxrwx. 1 root root 202667711 Oct 15 17:28 HITS.pool.root.1
2025-10-15 19:28:35 (33656): Guest Log: -rwxrwxrwx. 1 root root      9072 Oct 15 11:47 init_data.xml
2025-10-15 19:28:35 (33656): Guest Log: -rwxrwxrwx. 1 root root    569690 Oct 15 11:47 input.tar.gz
2025-10-15 19:28:35 (33656): Guest Log: -rwxrwxrwx. 1 root root   3133440 Oct 15 17:28 result.tar.gz
2025-10-15 19:28:35 (33656): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 15 11:47 start_atlas.sh
2025-10-15 19:28:35 (33656): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-15 19:28:35 (33656): VM Completion File Detected.
2025-10-15 19:28:35 (33656): Powering off VM.
2025-10-15 19:28:37 (33656): Successfully stopped VM.
2025-10-15 19:28:37 (33656): Deregistering VM. (boinc_0c6ebb9b03e8fa5e, slot#2)
2025-10-15 19:28:37 (33656): Removing network bandwidth throttle group from VM.
2025-10-15 19:28:37 (33656): Removing VM from VirtualBox.
2025-10-15 19:28:43 (33656): called boinc_finish(0)

</stderr_txt>
]]>

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