Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:51:44 (31709): wrapper (7.7.26015): starting
00:51:44 (31709): wrapper: running run_atlas (--nthreads 8)
[2025-10-16 00:51:44] Arguments: --nthreads 8
[2025-10-16 00:51:44] Threads: 8
[2025-10-16 00:51:44] Checking for CVMFS
[2025-10-16 00:51:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-16 00:51:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-16 00:51:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-16 00:51:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-16 00:51:46] 2.11.2.0 26884 225367 142764 151751 2 210 20954570 25165825 4585 130560 0 116938772 99.880 70441123 3143 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-16 00:51:46] CVMFS is ok
[2025-10-16 00:51:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-16 00:51:46] Checking for apptainer binary...
[2025-10-16 00:51:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-16 00:51:46] Running /usr/bin/apptainer --version
[2025-10-16 00:51:47] apptainer version 1.3.2-1.el7
[2025-10-16 00:51:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-16 00:51:52] cg-vwn403.simple-grid.lan
[2025-10-16 00:51:52] apptainer works
[2025-10-16 00:51:52] Set ATHENA_PROC_NUMBER=8
[2025-10-16 00:51:52] Set ATHENA_CORE_NUMBER=8
[2025-10-16 00:51:52] Starting ATLAS job with PandaID=6845719931
[2025-10-16 00:51:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-16 05:04:52]  *** The last 200 lines of the pilot log: ***
[2025-10-16 05:04:52] 2025-10-16 03:03:47,830 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-16 05:04:52] 2025-10-16 03:03:47,835 | INFO     | fitting pss+swap vs Time
[2025-10-16 05:04:52] 2025-10-16 03:03:47,835 | INFO     | sum of square deviations: 4024149870.0
[2025-10-16 05:04:52] 2025-10-16 03:03:47,837 | INFO     | sum of deviations: 89538694206.0
[2025-10-16 05:04:52] 2025-10-16 03:03:47,837 | INFO     | mean x: 1760576546.0
[2025-10-16 05:04:52] 2025-10-16 03:03:47,837 | INFO     | mean y: 2435056.8978723404
[2025-10-16 05:04:52] 2025-10-16 03:03:47,837 | INFO     | -- intersect: -39170987919.654854
[2025-10-16 05:04:52] 2025-10-16 03:03:47,837 | INFO     | intersect: -39170987919.654854
[2025-10-16 05:04:52] 2025-10-16 03:03:47,838 | INFO     | chi2: 5.846460353977222
[2025-10-16 05:04:52] 2025-10-16 03:03:47,838 | INFO     | sum of square deviations: 3772712597.5
[2025-10-16 05:04:52] 2025-10-16 03:03:47,840 | INFO     | sum of deviations: 102901102763.99997
[2025-10-16 05:04:52] 2025-10-16 03:03:47,840 | INFO     | mean x: 1760576393.5
[2025-10-16 05:04:52] 2025-10-16 03:03:47,840 | INFO     | mean y: 2442998.4782608696
[2025-10-16 05:04:52] 2025-10-16 03:03:47,840 | INFO     | -- intersect: -48017449243.37066
[2025-10-16 05:04:52] 2025-10-16 03:03:47,841 | INFO     | intersect: -48017449243.37066
[2025-10-16 05:04:52] 2025-10-16 03:03:47,841 | INFO     | chi2: 5.11579412151514
[2025-10-16 05:04:52] 2025-10-16 03:03:47,841 | INFO     | current chi2=5.11579412151514 (change=12.497582951452415 %)
[2025-10-16 05:04:52] 2025-10-16 03:03:47,841 | INFO     | right removable region: 229
[2025-10-16 05:04:52] 2025-10-16 03:03:47,842 | INFO     | sum of square deviations: 3772712597.5
[2025-10-16 05:04:52] 2025-10-16 03:03:47,843 | INFO     | sum of deviations: 12636308965.999996
[2025-10-16 05:04:52] 2025-10-16 03:03:47,850 | INFO     | mean x: 1760576698.5
[2025-10-16 05:04:52] 2025-10-16 03:03:47,850 | INFO     | mean y: 2481646.6347826086
[2025-10-16 05:04:52] 2025-10-16 03:03:47,850 | INFO     | -- intersect: -5894387130.310589
[2025-10-16 05:04:52] 2025-10-16 03:03:47,850 | INFO     | intersect: -5894387130.310589
[2025-10-16 05:04:52] 2025-10-16 03:03:47,851 | INFO     | chi2: 1.6197736054732665
[2025-10-16 05:04:52] 2025-10-16 03:03:47,851 | INFO     | current chi2=1.6197736054732665 (change=72.29479877732568 %)
[2025-10-16 05:04:52] 2025-10-16 03:03:47,851 | INFO     | sum of square deviations: 3531973200.0
[2025-10-16 05:04:52] 2025-10-16 03:03:47,853 | INFO     | sum of deviations: -15245043750.000004
[2025-10-16 05:04:52] 2025-10-16 03:03:47,853 | INFO     | mean x: 1760576851.0
[2025-10-16 05:04:52] 2025-10-16 03:03:47,853 | INFO     | mean y: 2499158.168888889
[2025-10-16 05:04:52] 2025-10-16 03:03:47,853 | INFO     | -- intersect: 7601670952.205219
[2025-10-16 05:04:52] 2025-10-16 03:03:47,853 | INFO     | intersect: 7601670952.205219
[2025-10-16 05:04:52] 2025-10-16 03:03:47,854 | INFO     | chi2: 0.8264001821498513
[2025-10-16 05:04:52] 2025-10-16 03:03:47,854 | INFO     | current chi2=0.8264001821498513 (change=48.980513118782845 %)
[2025-10-16 05:04:52] 2025-10-16 03:03:47,854 | INFO     | sum of square deviations: 3301699115.0
[2025-10-16 05:04:52] 2025-10-16 03:03:47,856 | INFO     | sum of deviations: -19873390995.0
[2025-10-16 05:04:52] 2025-10-16 03:03:47,856 | INFO     | mean x: 1760577003.5
[2025-10-16 05:04:52] 2025-10-16 03:03:47,856 | INFO     | mean y: 2502207.4454545453
[2025-10-16 05:04:52] 2025-10-16 03:03:47,856 | INFO     | -- intersect: 10599662623.548658
[2025-10-16 05:04:52] 2025-10-16 03:03:47,856 | INFO     | intersect: 10599662623.548658
[2025-10-16 05:04:52] 2025-10-16 03:03:47,857 | INFO     | chi2: 0.7957574832503831
[2025-10-16 05:04:52] 2025-10-16 03:03:47,857 | INFO     | current chi2=0.7957574832503831 (change=3.707973396103608 %)
[2025-10-16 05:04:52] 2025-10-16 03:03:47,857 | INFO     | left removable region: 30
[2025-10-16 05:04:52] 2025-10-16 03:03:47,857 | INFO     | sum of square deviations: 2443580700.0
[2025-10-16 05:04:52] 2025-10-16 03:03:47,859 | INFO     | sum of deviations: -6137549464.999999
[2025-10-16 05:04:52] 2025-10-16 03:03:47,859 | INFO     | mean x: 1760577278.0
[2025-10-16 05:04:52] 2025-10-16 03:03:47,859 | INFO     | mean y: 2513022.40201005
[2025-10-16 05:04:52] 2025-10-16 03:03:47,859 | INFO     | -- intersect: 4424560606.375829
[2025-10-16 05:04:52] 2025-10-16 03:03:47,859 | INFO     | intersect: 4424560606.375829
[2025-10-16 05:04:52] 2025-10-16 03:03:47,860 | INFO     | chi2: 0.0052043937509117545
[2025-10-16 05:04:52] 2025-10-16 03:03:47,860 | INFO     | -- intersect: 4424560606.375829
[2025-10-16 05:04:52] 2025-10-16 03:03:47,860 | INFO     | current memory leak: -2.51 B/s (using 199 data points, chi2=0.01)
[2025-10-16 05:04:52] 2025-10-16 03:03:47,860 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-16 05:04:52] 2025-10-16 03:03:47,861 | INFO     | ..............................
[2025-10-16 05:04:52] 2025-10-16 03:03:47,861 | INFO     | . Timing measurements:
[2025-10-16 05:04:52] 2025-10-16 03:03:47,861 | INFO     | . get job = 0 s
[2025-10-16 05:04:52] 2025-10-16 03:03:47,861 | INFO     | . initial setup = 8 s
[2025-10-16 05:04:52] 2025-10-16 03:03:47,861 | INFO     | . payload setup = 140 s
[2025-10-16 05:04:52] 2025-10-16 03:03:47,861 | INFO     | . stage-in = 0 s
[2025-10-16 05:04:52] 2025-10-16 03:03:47,861 | INFO     | . payload execution = 14465 s
[2025-10-16 05:04:52] 2025-10-16 03:03:47,861 | INFO     | . stage-out = 3 s
[2025-10-16 05:04:52] 2025-10-16 03:03:47,861 | INFO     | . log creation = 1 s
[2025-10-16 05:04:52] 2025-10-16 03:03:47,861 | INFO     | ..............................
[2025-10-16 05:04:52] 2025-10-16 03:03:47,863 | INFO     | time since job start (14910s) is within the limit (172800.0s)
[2025-10-16 05:04:52] 2025-10-16 03:03:48,523 | INFO     | 
[2025-10-16 05:04:52] 2025-10-16 03:03:48,523 | INFO     | job summary report
[2025-10-16 05:04:52] 2025-10-16 03:03:48,523 | INFO     | --------------------------------------------------
[2025-10-16 05:04:52] 2025-10-16 03:03:48,523 | INFO     | PanDA job id: 6845719931
[2025-10-16 05:04:52] 2025-10-16 03:03:48,523 | INFO     | task id: 46776533
[2025-10-16 05:04:52] 2025-10-16 03:03:48,523 | INFO     | errors: (none)
[2025-10-16 05:04:52] 2025-10-16 03:03:48,523 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-16 05:04:52] 2025-10-16 03:03:48,523 | INFO     | pilot state: finished 
[2025-10-16 05:04:52] 2025-10-16 03:03:48,524 | INFO     | transexitcode: 0
[2025-10-16 05:04:52] 2025-10-16 03:03:48,524 | INFO     | exeerrorcode: 0
[2025-10-16 05:04:52] 2025-10-16 03:03:48,524 | INFO     | exeerrordiag: 
[2025-10-16 05:04:52] 2025-10-16 03:03:48,524 | INFO     | exitcode: 0
[2025-10-16 05:04:52] 2025-10-16 03:03:48,524 | INFO     | exitmsg: OK
[2025-10-16 05:04:52] 2025-10-16 03:03:48,524 | INFO     | cpuconsumptiontime: 52623 s
[2025-10-16 05:04:52] 2025-10-16 03:03:48,524 | INFO     | nevents: 400
[2025-10-16 05:04:52] 2025-10-16 03:03:48,524 | INFO     | neventsw: 0
[2025-10-16 05:04:52] 2025-10-16 03:03:48,524 | INFO     | pid: 9612
[2025-10-16 05:04:52] 2025-10-16 03:03:48,524 | INFO     | pgrp: 9612
[2025-10-16 05:04:52] 2025-10-16 03:03:48,524 | INFO     | corecount: 8
[2025-10-16 05:04:52] 2025-10-16 03:03:48,524 | INFO     | event service: False
[2025-10-16 05:04:52] 2025-10-16 03:03:48,524 | INFO     | sizes: {0: 2348706, 1: 2348905, 12: 2348905, 23: 2348933, 33: 2348961, 44: 2349017, 55: 2349173, 66: 2349201, 76: 2349229, 87: 2349285, 89: 2349575, 98: 2349883, 1
[2025-10-16 05:04:52] 2025-10-16 03:03:48,525 | INFO     | --------------------------------------------------
[2025-10-16 05:04:52] 2025-10-16 03:03:48,525 | INFO     | 
[2025-10-16 05:04:52] 2025-10-16 03:03:48,525 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-10-16 05:04:52] 2025-10-16 03:03:49,137 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-16 05:04:52] 2025-10-16 03:03:49,138 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-16 05:04:52] 2025-10-16 03:03:49,138 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-16 05:04:52] 2025-10-16 03:03:49,138 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-16 05:04:52] 2025-10-16 03:03:49,138 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-16 05:04:52] 2025-10-16 03:03:49,138 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-16 05:04:52] 2025-10-16 03:03:49,138 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-16 05:04:52] 2025-10-16 03:03:49,138 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-16 05:04:52] 2025-10-16 03:03:49,138 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-16 05:04:52] 2025-10-16 03:03:49,139 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-16 05:04:52] 2025-10-16 03:03:49,139 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-16 05:04:52] 2025-10-16 03:03:49,139 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-16 05:04:52] 2025-10-16 03:03:49,139 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-16 05:04:52] 2025-10-16 03:03:49,139 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-16 05:04:52] 2025-10-16 03:03:49,139 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-16 05:04:52] 2025-10-16 03:03:49,139 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-16 05:04:52] 2025-10-16 03:03:49,139 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-16 05:04:52] 2025-10-16 03:03:49,139 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-16 05:04:52] 2025-10-16 03:03:49,139 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-16 05:04:52] 2025-10-16 03:03:49,139 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-16 05:04:52] 2025-10-16 03:03:49,140 | INFO     | job 6845719931 has completed (purged errors)
[2025-10-16 05:04:52] 2025-10-16 03:03:49,140 | INFO     | overall cleanup function is called
[2025-10-16 05:04:52] 2025-10-16 03:03:50,148 | INFO     | --- collectZombieJob: --- 10, [9612]
[2025-10-16 05:04:52] 2025-10-16 03:03:50,148 | INFO     | zombie collector waiting for pid 9612
[2025-10-16 05:04:52] 2025-10-16 03:03:50,148 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-16 05:04:52] 2025-10-16 03:03:50,148 | INFO     | collected zombie processes
[2025-10-16 05:04:52] 2025-10-16 03:03:50,148 | INFO     | will attempt to kill all subprocesses of pid=9612
[2025-10-16 05:04:52] 2025-10-16 03:03:50,250 | INFO     | process IDs to be killed: [9612] (in reverse order)
[2025-10-16 05:04:52] 2025-10-16 03:03:51,110 | WARNING  | found no corresponding commands to process id(s)
[2025-10-16 05:04:52] 2025-10-16 03:03:51,111 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-16 05:04:52] 2025-10-16 03:03:51,113 | INFO     | did not find any defunct processes belonging to 9612
[2025-10-16 05:04:52] 2025-10-16 03:03:51,116 | INFO     | did not find any defunct processes belonging to 9612
[2025-10-16 05:04:52] 2025-10-16 03:03:51,116 | INFO     | ready for new job
[2025-10-16 05:04:52] 2025-10-16 03:03:51,116 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-16 05:04:52] 2025-10-16 03:03:51,118 | INFO     | ***************************************
[2025-10-16 05:04:52] 2025-10-16 03:03:51,119 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-16 05:04:52] 2025-10-16 03:03:51,119 | INFO     | ***************************************
[2025-10-16 05:04:52] 2025-10-16 03:03:51,119 | INFO     | 
[2025-10-16 05:04:52] 2025-10-16 03:03:51,119 | INFO     | pilot is running in a VM
[2025-10-16 05:04:52] 2025-10-16 03:03:51,119 | INFO     | architecture information:
[2025-10-16 05:04:52] 2025-10-16 03:03:51,125 | INFO     | executing command: cat /etc/os-release
[2025-10-16 05:04:52] 2025-10-16 03:03:51,409 | INFO     | cat /etc/os-release:
[2025-10-16 05:04:52] NAME="CentOS Linux"
[2025-10-16 05:04:52] VERSION="7 (Core)"
[2025-10-16 05:04:52] ID="centos"
[2025-10-16 05:04:52] ID_LIKE="rhel fedora"
[2025-10-16 05:04:52] VERSION_ID="7"
[2025-10-16 05:04:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-16 05:04:52] ANSI_COLOR="0;31"
[2025-10-16 05:04:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-16 05:04:52] HOME_URL="https://www.centos.org/"
[2025-10-16 05:04:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-16 05:04:52] 
[2025-10-16 05:04:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-16 05:04:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-16 05:04:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-16 05:04:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-16 05:04:52] 
[2025-10-16 05:04:52] 2025-10-16 03:03:51,409 | INFO     | ***************************************
[2025-10-16 05:04:52] 2025-10-16 03:03:51,913 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-10-16 05:04:52] 2025-10-16 03:03:52,107 | INFO     | sufficient remaining disk space (495864250368 B)
[2025-10-16 05:04:52] 2025-10-16 03:03:52,108 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-16 05:04:52] 2025-10-16 03:03:52,108 | INFO     | current server update state: UPDATING_FINAL
[2025-10-16 05:04:52] 2025-10-16 03:03:52,108 | INFO     | update_server=False
[2025-10-16 05:04:52] 2025-10-16 03:03:52,108 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-16 05:04:52] 2025-10-16 03:03:52,109 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-16 05:04:52] 2025-10-16 03:03:52,109 | INFO     | aborting loop
[2025-10-16 05:04:52] 2025-10-16 03:03:52,316 | INFO     | all data control threads have been joined
[2025-10-16 05:04:52] 2025-10-16 03:03:52,393 | INFO     | all payload control threads have been joined
[2025-10-16 05:04:52] 2025-10-16 03:03:52,433 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-16 05:04:52] 2025-10-16 03:03:52,508 | INFO     | all job control threads have been joined
[2025-10-16 05:04:52] 2025-10-16 03:03:53,074 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-16 05:04:52] 2025-10-16 03:03:53,113 | INFO     | [job] retrieve thread has finished
[2025-10-16 05:04:52] 2025-10-16 03:03:53,115 | INFO     | [job] job monitor thread has finished
[2025-10-16 05:04:52] 2025-10-16 03:03:53,255 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-16 05:04:52] 2025-10-16 03:03:53,311 | INFO     | [payload] failed_post thread has finished
[2025-10-16 05:04:52] 2025-10-16 03:03:53,322 | INFO     | [data] control thread has finished
[2025-10-16 05:04:52] 2025-10-16 03:03:53,391 | INFO     | [data] copytool_in thread has finished
[2025-10-16 05:04:52] 2025-10-16 03:03:53,399 | INFO     | [payload] control thread has finished
[2025-10-16 05:04:52] 2025-10-16 03:03:53,406 | INFO     | [payload] execute_payloads thread has finished
[2025-10-16 05:04:52] 2025-10-16 03:03:53,406 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-16 05:04:52] 2025-10-16 03:03:53,514 | INFO     | [job] control thread has finished
[2025-10-16 05:04:52] 2025-10-16 03:03:53,770 | INFO     | [job] validate thread has finished
[2025-10-16 05:04:52] 2025-10-16 03:03:53,981 | INFO     | [payload] validate_pre thread has finished
[2025-10-16 05:04:52] 2025-10-16 03:03:54,080 | INFO     | [job] queue monitor thread has finished
[2025-10-16 05:04:52] 2025-10-16 03:03:54,104 | INFO     | [payload] validate_post thread has finished
[2025-10-16 05:04:52] 2025-10-16 03:03:54,511 | INFO     | [job] create_data_payload thread has finished
[2025-10-16 05:04:52] 2025-10-16 03:03:55,262 | INFO     | [data] copytool_out thread has finished
[2025-10-16 05:04:52] 2025-10-16 03:03:56,442 | INFO     | [data] queue_monitor thread has finished
[2025-10-16 05:04:52] 2025-10-16 03:04:21,089 | INFO     | PID=3096 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-16 05:04:52] 2025-10-16 03:04:21,089 | INFO     | .. there are 9 such processes running
[2025-10-16 05:04:52] 2025-10-16 03:04:21,090 | INFO     | found 0 job(s) in 20 queues
[2025-10-16 05:04:52] 2025-10-16 03:04:21,090 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-16 05:04:52] 2025-10-16 03:04:21,090 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-16 05:04:52] 2025-10-16 03:04:43,019 | INFO     | [monitor] cgroup control has ended
[2025-10-16 05:04:52] 2025-10-16 03:04:43,565 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140112938440512)>', '<ExcThread(monitor, started 140112360892160)>']
[2025-10-16 05:04:52] 2025-10-16 03:04:44,226 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-16 05:04:52] 2025-10-16 03:04:44,227 | INFO     | [monitor] control thread has ended
[2025-10-16 05:04:52] 2025-10-16 03:04:48,591 | INFO     | all workflow threads have been joined
[2025-10-16 05:04:52] 2025-10-16 03:04:48,591 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-16 05:04:52] 2025-10-16 03:04:48,591 | INFO     | traces error code: 0
[2025-10-16 05:04:52] 2025-10-16 03:04:48,591 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-16 05:04:52] 2025-10-16 03:04:48,996 [wrapper] ==== pilot stdout END ====
[2025-10-16 05:04:52] 2025-10-16 03:04:49,058 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-16 05:04:52] 2025-10-16 03:04:49,145 [wrapper] pilotpid: 3096
[2025-10-16 05:04:52] 2025-10-16 03:04:49,250 [wrapper] Pilot exit status: 0
[2025-10-16 05:04:52] 2025-10-16 03:04:49,550 [wrapper] pandaids: 6845719931
[2025-10-16 05:04:52] 2025-10-16 03:04:50,094 [wrapper] cleanup supervisor_pilot  5991 3097
[2025-10-16 05:04:52] 2025-10-16 03:04:50,194 [wrapper] Test setup, not cleaning
[2025-10-16 05:04:52] 2025-10-16 03:04:50,288 [wrapper] apfmon messages muted
[2025-10-16 05:04:52] 2025-10-16 03:04:50,352 [wrapper] ==== wrapper stdout END ====
[2025-10-16 05:04:52] 2025-10-16 03:04:50,423 [wrapper] ==== wrapper stderr END ====
[2025-10-16 05:04:52]  *** Error codes and diagnostics ***
[2025-10-16 05:04:52]     "exeErrorCode": 0,
[2025-10-16 05:04:52]     "exeErrorDiag": "",
[2025-10-16 05:04:52]     "pilotErrorCode": 0,
[2025-10-16 05:04:52]     "pilotErrorDiag": "",
[2025-10-16 05:04:52]  *** Listing of results directory ***
[2025-10-16 05:04:52] total 432512
[2025-10-16 05:04:52] -rwx------. 1 boinc boinc     36292 Oct 15 12:30 runpilot2-wrapper.sh
[2025-10-16 05:04:52] -rw-r--r--. 1 boinc boinc      5112 Oct 15 12:30 queuedata.json
[2025-10-16 05:04:52] -rw-r--r--. 1 boinc boinc    557409 Oct 15 12:30 pilot3.tar.gz
[2025-10-16 05:04:52] -rw-r--r--. 1 boinc boinc       100 Oct 16 00:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-16 05:04:52] -rwxr-xr-x. 1 boinc boinc      7986 Oct 16 00:51 run_atlas
[2025-10-16 05:04:52] -rw-r--r--. 1 boinc boinc       105 Oct 16 00:51 job.xml
[2025-10-16 05:04:52] -rw-r--r--. 1 boinc boinc      6391 Oct 16 00:51 init_data.xml
[2025-10-16 05:04:52] -rw-r--r--. 2 boinc boinc 227127773 Oct 16 00:51 EVNT.46776529._000282.pool.root.1
[2025-10-16 05:04:52] -rw-r--r--. 2 boinc boinc     15120 Oct 16 00:51 start_atlas.sh
[2025-10-16 05:04:52] drwxrwx--x. 2 boinc boinc        68 Oct 16 00:51 shared
[2025-10-16 05:04:52] -rw-r--r--. 2 boinc boinc    569671 Oct 16 00:51 input.tar.gz
[2025-10-16 05:04:52] -rw-r--r--. 1 boinc boinc         0 Oct 16 00:51 boinc_lockfile
[2025-10-16 05:04:52] -rw-r--r--. 1 boinc boinc      2558 Oct 16 00:51 pandaJob.out
[2025-10-16 05:04:52] -rw-------. 1 boinc boinc    974302 Oct 16 00:55 agis_schedconf.cvmfs.json
[2025-10-16 05:04:52] drwx------. 5 boinc boinc      4096 Oct 16 00:55 pilot3
[2025-10-16 05:04:52] -rw-------. 1 boinc boinc 206934972 Oct 16 05:00 HITS.46776533._005689.pool.root.1
[2025-10-16 05:04:52] -rw-r--r--. 1 boinc boinc       531 Oct 16 05:01 boinc_task_state.xml
[2025-10-16 05:04:52] -rw-------. 1 boinc boinc      1018 Oct 16 05:01 memory_monitor_summary.json
[2025-10-16 05:04:52] -rw-------. 1 boinc boinc   1560740 Oct 16 05:01 agis_ddmendpoints.agis.ALL.json
[2025-10-16 05:04:52] -rw-------. 1 boinc boinc    463524 Oct 16 05:01 log.46776533._005689.job.log.tgz.1
[2025-10-16 05:04:52] -rw-------. 1 boinc boinc        95 Oct 16 05:03 pilot_heartbeat.json
[2025-10-16 05:04:52] -rw-------. 1 boinc boinc      7783 Oct 16 05:03 heartbeat.json
[2025-10-16 05:04:52] -rw-r--r--. 1 boinc boinc      8192 Oct 16 05:04 boinc_mmap_file
[2025-10-16 05:04:52] -rw-r--r--. 1 boinc boinc        28 Oct 16 05:04 wrapper_checkpoint.txt
[2025-10-16 05:04:52] -rw-------. 1 boinc boinc      4884 Oct 16 05:04 pilotlog.txt
[2025-10-16 05:04:52] -rw-------. 1 boinc boinc   2002949 Oct 16 05:04 log.46776533._005689.job.log.1
[2025-10-16 05:04:52] -rw-------. 1 boinc boinc       357 Oct 16 05:04 output.list
[2025-10-16 05:04:52] -rw-r--r--. 1 boinc boinc       620 Oct 16 05:04 runtime_log
[2025-10-16 05:04:52] -rw-------. 1 boinc boinc   2488320 Oct 16 05:04 result.tar.gz
[2025-10-16 05:04:52] -rw-r--r--. 1 boinc boinc      8717 Oct 16 05:04 runtime_log.err
[2025-10-16 05:04:52] -rw-------. 1 boinc boinc       656 Oct 16 05:04 boMNDmJxDT8n9Rq4apOajLDm4fhM0noT9bVof3QYDmVQWMDmusPq1n.diag
[2025-10-16 05:04:52] -rw-r--r--. 1 boinc boinc     20627 Oct 16 05:04 stderr.txt
[2025-10-16 05:04:52] HITS file was successfully produced:
[2025-10-16 05:04:52] -rw-------. 1 boinc boinc 206934972 Oct 16 05:00 shared/HITS.pool.root.1
[2025-10-16 05:04:52]  *** Contents of shared directory: ***
[2025-10-16 05:04:52] total 426904
[2025-10-16 05:04:52] -rw-r--r--. 2 boinc boinc 227127773 Oct 16 00:51 ATLAS.root_0
[2025-10-16 05:04:52] -rw-r--r--. 2 boinc boinc     15120 Oct 16 00:51 start_atlas.sh
[2025-10-16 05:04:52] -rw-r--r--. 2 boinc boinc    569671 Oct 16 00:51 input.tar.gz
[2025-10-16 05:04:52] -rw-------. 1 boinc boinc 206934972 Oct 16 05:00 HITS.pool.root.1
[2025-10-16 05:04:52] -rw-------. 1 boinc boinc   2488320 Oct 16 05:04 result.tar.gz
05:04:54 (31709): run_atlas exited; CPU time 52800.878469
05:04:54 (31709): called boinc_finish(0)

</stderr_txt>
]]>

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