Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:46:08 (399644): wrapper (7.7.26015): starting
16:46:08 (399644): wrapper: running run_atlas (--nthreads 3)
[2025-10-15 16:46:08] Arguments: --nthreads 3
[2025-10-15 16:46:08] Threads: 3
[2025-10-15 16:46:08] Checking for CVMFS
[2025-10-15 16:46:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-15 16:46:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-15 16:46:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-15 16:46:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-15 16:46:08] 2.9.2.0 317812 296 54944 151737 3 57 29273431 36864001 0 130560 0 213298 99.988 12047 1175 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-15 16:46:08] CVMFS is ok
[2025-10-15 16:46:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-15 16:46:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-15 16:46:08] Further information can be found at the LHC@home message board.
[2025-10-15 16:46:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-15 16:46:08] Checking for apptainer binary...
[2025-10-15 16:46:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-15 16:46:08] Running /usr/bin/apptainer --version
[2025-10-15 16:46:08] apptainer version 1.4.1-1.1
[2025-10-15 16:46:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-15 16:46:08] cosA133a
[2025-10-15 16:46:08] apptainer works
[2025-10-15 16:46:08] Set ATHENA_PROC_NUMBER=3
[2025-10-15 16:46:08] Set ATHENA_CORE_NUMBER=3
[2025-10-15 16:46:08] Starting ATLAS job with PandaID=6845709840
[2025-10-15 16:46:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-15 18:28:35]  *** The last 200 lines of the pilot log: ***
[2025-10-15 18:28:35]  status_code=0
[2025-10-15 18:28:35]  storage_token=
[2025-10-15 18:28:35]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6845709840/log.46776533._005367.job.log.tgz.1
[2025-10-15 18:28:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8d/3e/log.46776533._005367.job.log.tgz.1
[2025-10-15 18:28:35]  workdir=None
[2025-10-15 18:28:35] ]
[2025-10-15 18:28:35] 2025-10-15 16:27:21,218 | INFO     | transferring file log.46776533._005367.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6845709840/log.46776533._005367.job.log.tgz.1 to /local/data/boinc/
[2025-10-15 18:28:35] 2025-10-15 16:27:21,218 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6845709840/log.46776533._005367.job.log.tgz.1 /local/data/boinc/slots/0/log.46776533._0053
[2025-10-15 18:28:35] 2025-10-15 16:27:21,230 | INFO     | adding to output.list: log.46776533._005367.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8d/3e/log.46776533._005367.job.log.tg
[2025-10-15 18:28:35] 2025-10-15 16:27:21,231 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-15 18:28:35] 2025-10-15 16:27:21,231 | INFO     | summary of transferred files:
[2025-10-15 18:28:35] 2025-10-15 16:27:21,231 | INFO     |  -- lfn=log.46776533._005367.job.log.tgz.1, status_code=0, status=transferred
[2025-10-15 18:28:35] 2025-10-15 16:27:21,231 | INFO     | stage-out finished correctly
[2025-10-15 18:28:35] 2025-10-15 16:27:22,082 | INFO     | time since job start (6061s) is within the limit (172800.0s)
[2025-10-15 18:28:35] 2025-10-15 16:27:23,722 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-15 18:28:35] 2025-10-15 16:27:23,751 | INFO     | job 6845709840 has state=finished
[2025-10-15 18:28:35] 2025-10-15 16:27:23,752 | INFO     | preparing for final server update for job 6845709840 in state='finished'
[2025-10-15 18:28:35] 2025-10-15 16:27:23,756 | INFO     | this job has now completed (state=finished)
[2025-10-15 18:28:35] 2025-10-15 16:27:23,756 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-15 18:28:35] 2025-10-15 16:27:23,757 | INFO     | log transfer has been attempted: DONE
[2025-10-15 18:28:35] 2025-10-15 16:27:23,757 | INFO     | job 6845709840 has finished - writing final server update
[2025-10-15 18:28:35] 2025-10-15 16:27:23,757 | INFO     | total number of processed events: 400 (read)
[2025-10-15 18:28:35] 2025-10-15 16:27:23,758 | INFO     | executing command: lscpu
[2025-10-15 18:28:35] 2025-10-15 16:27:23,779 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-15 18:28:35] 2025-10-15 16:27:24,088 | INFO     | time since job start (6063s) is within the limit (172800.0s)
[2025-10-15 18:28:35] 2025-10-15 16:27:24,390 | WARNING  | process 409822 can no longer be monitored (due to stat problems) - aborting
[2025-10-15 18:28:35] 2025-10-15 16:27:24,390 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6845709840/memory_monitor_summary.json (trf name=prmon)
[2025-10-15 18:28:35] 2025-10-15 16:27:24,426 | INFO     | number of running child processes to parent process 409822: 1
[2025-10-15 18:28:35] 2025-10-15 16:27:24,426 | INFO     | maximum number of monitored processes: 6
[2025-10-15 18:28:35] 2025-10-15 16:27:26,095 | INFO     | time since job start (6065s) is within the limit (172800.0s)
[2025-10-15 18:28:35] 2025-10-15 16:27:26,928 | INFO     | monitor loop #466: job 0:6845709840 is in state 'finished'
[2025-10-15 18:28:35] 2025-10-15 16:27:26,928 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-15 18:28:35] 2025-10-15 16:27:28,101 | INFO     | time since job start (6067s) is within the limit (172800.0s)
[2025-10-15 18:28:35] 2025-10-15 16:27:29,432 | INFO     | monitor loop #467: job 0:6845709840 is in state 'finished'
[2025-10-15 18:28:35] 2025-10-15 16:27:29,432 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-15 18:28:35] 2025-10-15 16:27:30,108 | INFO     | time since job start (6069s) is within the limit (172800.0s)
[2025-10-15 18:28:35] 2025-10-15 16:27:30,897 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-15 18:28:35] 2025-10-15 16:27:30,898 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4364.600416666666
[2025-10-15 18:28:35] 2025-10-15 16:27:30,899 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6845709840/memory_monitor_summary.json (trf name=prmon)
[2025-10-15 18:28:35] 2025-10-15 16:27:30,899 | INFO     | extracted standard info from prmon json
[2025-10-15 18:28:35] 2025-10-15 16:27:30,899 | INFO     | extracted standard memory fields from prmon json
[2025-10-15 18:28:35] 2025-10-15 16:27:30,899 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-15 18:28:35] 2025-10-15 16:27:30,900 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-15 18:28:35] 2025-10-15 16:27:30,900 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-15 18:28:35] 2025-10-15 16:27:30,900 | INFO     | fitting pss+swap vs Time
[2025-10-15 18:28:35] 2025-10-15 16:27:30,900 | INFO     | sum of square deviations: 241429643.0
[2025-10-15 18:28:35] 2025-10-15 16:27:30,901 | INFO     | sum of deviations: -12667084137.0
[2025-10-15 18:28:35] 2025-10-15 16:27:30,901 | INFO     | mean x: 1760542688.5
[2025-10-15 18:28:35] 2025-10-15 16:27:30,901 | INFO     | mean y: 2446541.7391304346
[2025-10-15 18:28:35] 2025-10-15 16:27:30,901 | INFO     | -- intersect: 92372803739.38318
[2025-10-15 18:28:35] 2025-10-15 16:27:30,901 | INFO     | intersect: 92372803739.38318
[2025-10-15 18:28:35] 2025-10-15 16:27:30,901 | INFO     | chi2: 0.12531138723602203
[2025-10-15 18:28:35] 2025-10-15 16:27:30,901 | INFO     | -- intersect: 92372803739.38318
[2025-10-15 18:28:35] 2025-10-15 16:27:30,901 | INFO     | current memory leak: -52.47 B/s (using 92 data points, chi2=0.13)
[2025-10-15 18:28:35] 2025-10-15 16:27:30,901 | INFO     | could have reported an average CPU frequency of 4323 MHz (7 samples)
[2025-10-15 18:28:35] 2025-10-15 16:27:30,901 | INFO     | ..............................
[2025-10-15 18:28:35] 2025-10-15 16:27:30,901 | INFO     | . Timing measurements:
[2025-10-15 18:28:35] 2025-10-15 16:27:30,901 | INFO     | . get job = 0 s
[2025-10-15 18:28:35] 2025-10-15 16:27:30,901 | INFO     | . initial setup = 1 s
[2025-10-15 18:28:35] 2025-10-15 16:27:30,901 | INFO     | . payload setup = 6 s
[2025-10-15 18:28:35] 2025-10-15 16:27:30,901 | INFO     | . stage-in = 0 s
[2025-10-15 18:28:35] 2025-10-15 16:27:30,901 | INFO     | . payload execution = 6033 s
[2025-10-15 18:28:35] 2025-10-15 16:27:30,901 | INFO     | . stage-out = 0 s
[2025-10-15 18:28:35] 2025-10-15 16:27:30,901 | INFO     | . log creation = 0 s
[2025-10-15 18:28:35] 2025-10-15 16:27:30,901 | INFO     | ..............................
[2025-10-15 18:28:35] 2025-10-15 16:27:31,195 | INFO     | 
[2025-10-15 18:28:35] 2025-10-15 16:27:31,196 | INFO     | job summary report
[2025-10-15 18:28:35] 2025-10-15 16:27:31,196 | INFO     | --------------------------------------------------
[2025-10-15 18:28:35] 2025-10-15 16:27:31,196 | INFO     | PanDA job id: 6845709840
[2025-10-15 18:28:35] 2025-10-15 16:27:31,196 | INFO     | task id: 46776533
[2025-10-15 18:28:35] 2025-10-15 16:27:31,196 | INFO     | errors: (none)
[2025-10-15 18:28:35] 2025-10-15 16:27:31,196 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-15 18:28:35] 2025-10-15 16:27:31,197 | INFO     | pilot state: finished 
[2025-10-15 18:28:35] 2025-10-15 16:27:31,197 | INFO     | transexitcode: 0
[2025-10-15 18:28:35] 2025-10-15 16:27:31,197 | INFO     | exeerrorcode: 0
[2025-10-15 18:28:35] 2025-10-15 16:27:31,197 | INFO     | exeerrordiag: 
[2025-10-15 18:28:35] 2025-10-15 16:27:31,197 | INFO     | exitcode: 0
[2025-10-15 18:28:35] 2025-10-15 16:27:31,197 | INFO     | exitmsg: OK
[2025-10-15 18:28:35] 2025-10-15 16:27:31,197 | INFO     | cpuconsumptiontime: 17392 s
[2025-10-15 18:28:35] 2025-10-15 16:27:31,197 | INFO     | nevents: 400
[2025-10-15 18:28:35] 2025-10-15 16:27:31,198 | INFO     | neventsw: 0
[2025-10-15 18:28:35] 2025-10-15 16:27:31,198 | INFO     | pid: 409822
[2025-10-15 18:28:35] 2025-10-15 16:27:31,198 | INFO     | pgrp: 409822
[2025-10-15 18:28:35] 2025-10-15 16:27:31,198 | INFO     | corecount: 3
[2025-10-15 18:28:35] 2025-10-15 16:27:31,198 | INFO     | event service: False
[2025-10-15 18:28:35] 2025-10-15 16:27:31,198 | INFO     | sizes: {0: 2348930, 6: 2349192, 10: 2349220, 6042: 2376244, 6043: 2385248, 6045: 2385304, 6052: 2385626}
[2025-10-15 18:28:35] 2025-10-15 16:27:31,198 | INFO     | --------------------------------------------------
[2025-10-15 18:28:35] 2025-10-15 16:27:31,198 | INFO     | 
[2025-10-15 18:28:35] 2025-10-15 16:27:31,199 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-15 18:28:35] 2025-10-15 16:27:31,212 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-15 18:28:35] 2025-10-15 16:27:31,212 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-15 18:28:35] 2025-10-15 16:27:31,212 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-15 18:28:35] 2025-10-15 16:27:31,212 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-15 18:28:35] 2025-10-15 16:27:31,212 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-15 18:28:35] 2025-10-15 16:27:31,212 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-15 18:28:35] 2025-10-15 16:27:31,212 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-15 18:28:35] 2025-10-15 16:27:31,212 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-15 18:28:35] 2025-10-15 16:27:31,212 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-15 18:28:35] 2025-10-15 16:27:31,212 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-15 18:28:35] 2025-10-15 16:27:31,212 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-15 18:28:35] 2025-10-15 16:27:31,212 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-15 18:28:35] 2025-10-15 16:27:31,212 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-15 18:28:35] 2025-10-15 16:27:31,212 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-15 18:28:35] 2025-10-15 16:27:31,212 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-15 18:28:35] 2025-10-15 16:27:31,212 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-15 18:28:35] 2025-10-15 16:27:31,212 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-15 18:28:35] 2025-10-15 16:27:31,212 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-15 18:28:35] 2025-10-15 16:27:31,212 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-15 18:28:35] 2025-10-15 16:27:31,213 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-15 18:28:35] 2025-10-15 16:27:31,213 | INFO     | job 6845709840 has completed (purged errors)
[2025-10-15 18:28:35] 2025-10-15 16:27:31,213 | INFO     | overall cleanup function is called
[2025-10-15 18:28:35] 2025-10-15 16:27:32,219 | INFO     | --- collectZombieJob: --- 10, [409822]
[2025-10-15 18:28:35] 2025-10-15 16:27:32,219 | INFO     | zombie collector waiting for pid 409822
[2025-10-15 18:28:35] 2025-10-15 16:27:32,220 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-15 18:28:35] 2025-10-15 16:27:32,220 | INFO     | collected zombie processes
[2025-10-15 18:28:35] 2025-10-15 16:27:32,220 | INFO     | will attempt to kill all subprocesses of pid=409822
[2025-10-15 18:28:35] 2025-10-15 16:27:32,257 | INFO     | process IDs to be killed: [409822] (in reverse order)
[2025-10-15 18:28:35] 2025-10-15 16:27:32,282 | WARNING  | found no corresponding commands to process id(s)
[2025-10-15 18:28:35] 2025-10-15 16:27:32,282 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-15 18:28:35] 2025-10-15 16:27:32,283 | INFO     | did not find any defunct processes belonging to 409822
[2025-10-15 18:28:35] 2025-10-15 16:27:32,284 | INFO     | did not find any defunct processes belonging to 409822
[2025-10-15 18:28:35] 2025-10-15 16:27:32,284 | INFO     | ready for new job
[2025-10-15 18:28:35] 2025-10-15 16:27:32,284 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-15 18:28:35] 2025-10-15 16:27:32,285 | INFO     | ***************************************
[2025-10-15 18:28:35] 2025-10-15 16:27:32,285 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-15 18:28:35] 2025-10-15 16:27:32,285 | INFO     | ***************************************
[2025-10-15 18:28:35] 2025-10-15 16:27:32,285 | INFO     | 
[2025-10-15 18:28:35] 2025-10-15 16:27:32,285 | INFO     | architecture information:
[2025-10-15 18:28:35] 2025-10-15 16:27:32,286 | INFO     | executing command: cat /etc/os-release
[2025-10-15 18:28:35] 2025-10-15 16:27:32,296 | INFO     | cat /etc/os-release:
[2025-10-15 18:28:35] NAME="CentOS Linux"
[2025-10-15 18:28:35] VERSION="7 (Core)"
[2025-10-15 18:28:35] ID="centos"
[2025-10-15 18:28:35] ID_LIKE="rhel fedora"
[2025-10-15 18:28:35] VERSION_ID="7"
[2025-10-15 18:28:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-15 18:28:35] ANSI_COLOR="0;31"
[2025-10-15 18:28:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-15 18:28:35] HOME_URL="https://www.centos.org/"
[2025-10-15 18:28:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-15 18:28:35] 
[2025-10-15 18:28:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-15 18:28:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-15 18:28:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-15 18:28:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-15 18:28:35] 
[2025-10-15 18:28:35] 2025-10-15 16:27:32,296 | INFO     | ***************************************
[2025-10-15 18:28:35] 2025-10-15 16:27:32,799 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-15 18:28:35] 2025-10-15 16:27:32,813 | INFO     | sufficient remaining disk space (332265422848 B)
[2025-10-15 18:28:35] 2025-10-15 16:27:32,813 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-15 18:28:35] 2025-10-15 16:27:32,813 | INFO     | current server update state: UPDATING_FINAL
[2025-10-15 18:28:35] 2025-10-15 16:27:32,813 | INFO     | update_server=False
[2025-10-15 18:28:35] 2025-10-15 16:27:32,813 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-15 18:28:35] 2025-10-15 16:27:32,813 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-15 18:28:35] 2025-10-15 16:27:32,941 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-15 18:28:35] 2025-10-15 16:27:32,942 | INFO     | aborting loop
[2025-10-15 18:28:35] 2025-10-15 16:27:32,978 | INFO     | all job control threads have been joined
[2025-10-15 18:28:35] 2025-10-15 16:27:33,407 | INFO     | all data control threads have been joined
[2025-10-15 18:28:35] 2025-10-15 16:27:33,819 | INFO     | [job] retrieve thread has finished
[2025-10-15 18:28:35] 2025-10-15 16:27:33,819 | INFO     | [job] queue monitor thread has finished
[2025-10-15 18:28:35] 2025-10-15 16:27:33,880 | INFO     | [data] copytool_in thread has finished
[2025-10-15 18:28:35] 2025-10-15 16:27:33,935 | INFO     | [payload] execute_payloads thread has finished
[2025-10-15 18:28:35] 2025-10-15 16:27:33,936 | INFO     | [job] create_data_payload thread has finished
[2025-10-15 18:28:35] 2025-10-15 16:27:33,947 | INFO     | [job] job monitor thread has finished
[2025-10-15 18:28:35] 2025-10-15 16:27:33,983 | INFO     | [payload] failed_post thread has finished
[2025-10-15 18:28:35] 2025-10-15 16:27:33,984 | INFO     | [job] control thread has finished
[2025-10-15 18:28:35] 2025-10-15 16:27:34,183 | INFO     | all payload control threads have been joined
[2025-10-15 18:28:35] 2025-10-15 16:27:34,260 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-15 18:28:35] 2025-10-15 16:27:34,284 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-15 18:28:35] 2025-10-15 16:27:34,413 | INFO     | [data] control thread has finished
[2025-10-15 18:28:35] 2025-10-15 16:27:34,769 | INFO     | [payload] validate_post thread has finished
[2025-10-15 18:28:35] 2025-10-15 16:27:35,139 | INFO     | [payload] validate_pre thread has finished
[2025-10-15 18:28:35] 2025-10-15 16:27:35,189 | INFO     | [payload] control thread has finished
[2025-10-15 18:28:35] 2025-10-15 16:27:35,225 | INFO     | [job] validate thread has finished
[2025-10-15 18:28:35] 2025-10-15 16:27:36,291 | INFO     | [data] copytool_out thread has finished
[2025-10-15 18:28:35] 2025-10-15 16:27:38,266 | INFO     | [data] queue_monitor thread has finished
[2025-10-15 18:28:35] 2025-10-15 16:27:43,759 | INFO     | job.realtimelogging is not enabled
[2025-10-15 18:28:35] 2025-10-15 16:27:44,765 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-15 18:28:35] 2025-10-15 16:28:03,218 | INFO     | PID=403375 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-15 18:28:35] 2025-10-15 16:28:03,218 | INFO     | found 0 job(s) in 20 queues
[2025-10-15 18:28:35] 2025-10-15 16:28:03,218 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-15 18:28:35] 2025-10-15 16:28:03,218 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-15 18:28:35] 2025-10-15 16:28:28,853 | INFO     | [monitor] cgroup control has ended
[2025-10-15 18:28:35] 2025-10-15 16:28:29,859 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139970068289344)>', '<ExcThread(monitor, started 139969360295680)>']
[2025-10-15 18:28:35] 2025-10-15 16:28:30,360 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-15 18:28:35] 2025-10-15 16:28:30,361 | INFO     | [monitor] control thread has ended
[2025-10-15 18:28:35] 2025-10-15 16:28:34,879 | INFO     | all workflow threads have been joined
[2025-10-15 18:28:35] 2025-10-15 16:28:34,880 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-15 18:28:35] 2025-10-15 16:28:34,880 | INFO     | traces error code: 0
[2025-10-15 18:28:35] 2025-10-15 16:28:34,881 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-15 18:28:35] 2025-10-15 16:28:34,927 [wrapper] ==== pilot stdout END ====
[2025-10-15 18:28:35] 2025-10-15 16:28:34,931 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-15 18:28:35] 2025-10-15 16:28:34,934 [wrapper] pilotpid: 403375
[2025-10-15 18:28:35] 2025-10-15 16:28:34,937 [wrapper] Pilot exit status: 0
[2025-10-15 18:28:35] 2025-10-15 16:28:34,944 [wrapper] pandaids: 6845709840
[2025-10-15 18:28:35] 2025-10-15 16:28:34,962 [wrapper] cleanup supervisor_pilot  421945 403376
[2025-10-15 18:28:35] 2025-10-15 16:28:34,965 [wrapper] Test setup, not cleaning
[2025-10-15 18:28:35] 2025-10-15 16:28:34,968 [wrapper] apfmon messages muted
[2025-10-15 18:28:35] 2025-10-15 16:28:34,970 [wrapper] ==== wrapper stdout END ====
[2025-10-15 18:28:35] 2025-10-15 16:28:34,973 [wrapper] ==== wrapper stderr END ====
[2025-10-15 18:28:35]  *** Error codes and diagnostics ***
[2025-10-15 18:28:35]     "exeErrorCode": 0,
[2025-10-15 18:28:35]     "exeErrorDiag": "",
[2025-10-15 18:28:35]     "pilotErrorCode": 0,
[2025-10-15 18:28:35]     "pilotErrorDiag": "",
[2025-10-15 18:28:35]  *** Listing of results directory ***
[2025-10-15 18:28:35] total 435752
[2025-10-15 18:28:35] -rw-r--r-- 1 boinc boinc    557409 Oct 15 11:36 pilot3.tar.gz
[2025-10-15 18:28:35] -rw-r--r-- 1 boinc boinc      5112 Oct 15 12:20 queuedata.json
[2025-10-15 18:28:35] -rwx------ 1 boinc boinc     36292 Oct 15 12:21 runpilot2-wrapper.sh
[2025-10-15 18:28:35] -rw-r--r-- 1 boinc boinc       100 Oct 15 16:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-15 18:28:35] -rwxr-xr-x 1 boinc boinc      7986 Oct 15 16:46 run_atlas
[2025-10-15 18:28:35] -rw-r--r-- 1 boinc boinc       105 Oct 15 16:46 job.xml
[2025-10-15 18:28:35] -rw-r--r-- 2 boinc boinc 228036160 Oct 15 16:46 EVNT.46776529._000269.pool.root.1
[2025-10-15 18:28:35] -rw-r--r-- 2 boinc boinc    569684 Oct 15 16:46 input.tar.gz
[2025-10-15 18:28:35] -rw-r--r-- 2 boinc boinc     15120 Oct 15 16:46 start_atlas.sh
[2025-10-15 18:28:35] drwxrwx--x 2 boinc boinc      4096 Oct 15 16:46 shared
[2025-10-15 18:28:35] -rw-r--r-- 1 boinc boinc         0 Oct 15 16:46 boinc_setup_complete
[2025-10-15 18:28:35] -rw-r--r-- 1 boinc boinc      6200 Oct 15 16:46 init_data.xml
[2025-10-15 18:28:35] -rw-r--r-- 1 boinc boinc         0 Oct 15 16:46 boinc_lockfile
[2025-10-15 18:28:35] -rw-r--r-- 1 boinc boinc      2559 Oct 15 16:46 pandaJob.out
[2025-10-15 18:28:35] -rw------- 1 boinc boinc    973863 Oct 15 16:46 agis_schedconf.cvmfs.json
[2025-10-15 18:28:35] -rw------- 1 boinc boinc   1560740 Oct 15 16:46 agis_ddmendpoints.agis.ALL.json
[2025-10-15 18:28:35] drwx------ 5 boinc boinc      4096 Oct 15 16:46 pilot3
[2025-10-15 18:28:35] -rw------- 1 boinc boinc 211976165 Oct 15 18:27 HITS.46776533._005367.pool.root.1
[2025-10-15 18:28:35] -rw-r--r-- 1 boinc boinc       530 Oct 15 18:27 boinc_task_state.xml
[2025-10-15 18:28:35] -rw------- 1 boinc boinc      1016 Oct 15 18:27 memory_monitor_summary.json
[2025-10-15 18:28:35] -rw------- 1 boinc boinc    271612 Oct 15 18:27 log.46776533._005367.job.log.tgz.1
[2025-10-15 18:28:35] -rw------- 1 boinc boinc      7758 Oct 15 18:27 heartbeat.json
[2025-10-15 18:28:35] -rw------- 1 boinc boinc        95 Oct 15 18:28 pilot_heartbeat.json
[2025-10-15 18:28:35] -rw-r--r-- 1 boinc boinc        27 Oct 15 18:28 wrapper_checkpoint.txt
[2025-10-15 18:28:35] -rw-r--r-- 1 boinc boinc      8192 Oct 15 18:28 boinc_mmap_file
[2025-10-15 18:28:35] -rw------- 1 boinc boinc      4823 Oct 15 18:28 pilotlog.txt
[2025-10-15 18:28:35] -rw------- 1 boinc boinc    879946 Oct 15 18:28 log.46776533._005367.job.log.1
[2025-10-15 18:28:35] -rw------- 1 boinc boinc       357 Oct 15 18:28 output.list
[2025-10-15 18:28:35] -rw-r--r-- 1 boinc boinc       620 Oct 15 18:28 runtime_log
[2025-10-15 18:28:35] -rw------- 1 boinc boinc   1167360 Oct 15 18:28 result.tar.gz
[2025-10-15 18:28:35] -rw-r--r-- 1 boinc boinc      8787 Oct 15 18:28 runtime_log.err
[2025-10-15 18:28:35] -rw------- 1 boinc boinc       660 Oct 15 18:28 RecMDmboDT8n9Rq4apOajLDm4fhM0noT9bVof3QYDmzOWMDm8IPEwn.diag
[2025-10-15 18:28:35] -rw-r--r-- 1 boinc boinc     22080 Oct 15 18:28 stderr.txt
[2025-10-15 18:28:35] HITS file was successfully produced:
[2025-10-15 18:28:35] -rw------- 1 boinc boinc 211976165 Oct 15 18:27 shared/HITS.pool.root.1
[2025-10-15 18:28:35]  *** Contents of shared directory: ***
[2025-10-15 18:28:35] total 431424
[2025-10-15 18:28:35] -rw-r--r-- 2 boinc boinc 228036160 Oct 15 16:46 ATLAS.root_0
[2025-10-15 18:28:35] -rw-r--r-- 2 boinc boinc    569684 Oct 15 16:46 input.tar.gz
[2025-10-15 18:28:35] -rw-r--r-- 2 boinc boinc     15120 Oct 15 16:46 start_atlas.sh
[2025-10-15 18:28:35] -rw------- 1 boinc boinc 211976165 Oct 15 18:27 HITS.pool.root.1
[2025-10-15 18:28:35] -rw------- 1 boinc boinc   1167360 Oct 15 18:28 result.tar.gz
18:28:37 (399644): run_atlas exited; CPU time 17421.371459
18:28:37 (399644): called boinc_finish(0)

</stderr_txt>
]]>

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