Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:58:27 (1204355): wrapper (7.7.26015): starting
12:58:27 (1204355): wrapper: running run_atlas (--nthreads 9)
[2025-10-15 12:58:27] Arguments: --nthreads 9
[2025-10-15 12:58:27] Threads: 9
[2025-10-15 12:58:27] Checking for CVMFS
[2025-10-15 12:58:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-15 12:58:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-15 12:58:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-15 12:58:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-15 12:58:29] 2.13.2.0 403710 15851 211452 151741 3 261 27971836 32935937 21889 16776704 0 45653596 99.675 37433323 28771 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-15 12:58:29] CVMFS is ok
[2025-10-15 12:58:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-15 12:58:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-15 12:58:29] Further information can be found at the LHC@home message board.
[2025-10-15 12:58:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-15 12:58:29] Checking for apptainer binary...
[2025-10-15 12:58:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-15 12:58:29] Running /usr/bin/apptainer --version
[2025-10-15 12:58:29] apptainer version 1.4.3-1.el9
[2025-10-15 12:58:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-15 12:58:29] c-4-40.aglt2.org
[2025-10-15 12:58:29] apptainer works
[2025-10-15 12:58:29] Set ATHENA_PROC_NUMBER=9
[2025-10-15 12:58:29] Set ATHENA_CORE_NUMBER=9
[2025-10-15 12:58:29] Starting ATLAS job with PandaID=6845708097
[2025-10-15 12:58:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-15 16:15:18]  *** The last 200 lines of the pilot log: ***
[2025-10-15 16:15:18] 2025-10-15 20:14:16,906 | INFO     | time since job start (11726s) is within the limit (172800.0s)
[2025-10-15 16:15:18] 2025-10-15 20:14:17,499 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-15 16:15:18] 2025-10-15 20:14:17,506 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2759.901474999998
[2025-10-15 16:15:18] 2025-10-15 20:14:17,513 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6845708097/memory_monitor_summary.json (trf name=prmon)
[2025-10-15 16:15:18] 2025-10-15 20:14:17,514 | INFO     | extracted standard info from prmon json
[2025-10-15 16:15:18] 2025-10-15 20:14:17,514 | INFO     | extracted standard memory fields from prmon json
[2025-10-15 16:15:18] 2025-10-15 20:14:17,514 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-15 16:15:18] 2025-10-15 20:14:17,514 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-15 16:15:18] 2025-10-15 20:14:17,515 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-15 16:15:18] 2025-10-15 20:14:17,518 | INFO     | fitting pss+swap vs Time
[2025-10-15 16:15:18] 2025-10-15 20:14:17,519 | INFO     | sum of square deviations: 2194460150.328125
[2025-10-15 16:15:18] 2025-10-15 20:14:17,520 | INFO     | sum of deviations: -22897260788.343742
[2025-10-15 16:15:18] 2025-10-15 20:14:17,520 | INFO     | mean x: 1760553416.328125
[2025-10-15 16:15:18] 2025-10-15 20:14:17,521 | INFO     | mean y: 2235501.9895833335
[2025-10-15 16:15:18] 2025-10-15 20:14:17,521 | INFO     | -- intersect: 18372061310.60451
[2025-10-15 16:15:18] 2025-10-15 20:14:17,521 | INFO     | intersect: 18372061310.60451
[2025-10-15 16:15:18] 2025-10-15 20:14:17,521 | INFO     | chi2: 2.985297178351621
[2025-10-15 16:15:18] 2025-10-15 20:14:17,522 | INFO     | sum of square deviations: 2027472951.8074872
[2025-10-15 16:15:18] 2025-10-15 20:14:17,523 | INFO     | sum of deviations: -11197007929.684488
[2025-10-15 16:15:18] 2025-10-15 20:14:17,523 | INFO     | mean x: 1760553263.8502674
[2025-10-15 16:15:18] 2025-10-15 20:14:17,523 | INFO     | mean y: 2245973.689839572
[2025-10-15 16:15:18] 2025-10-15 20:14:17,523 | INFO     | -- intersect: 9725151938.175987
[2025-10-15 16:15:18] 2025-10-15 20:14:17,523 | INFO     | intersect: 9725151938.175987
[2025-10-15 16:15:18] 2025-10-15 20:14:17,524 | INFO     | chi2: 2.347287665491387
[2025-10-15 16:15:18] 2025-10-15 20:14:17,524 | INFO     | current chi2=2.347287665491387 (change=21.371725317226915 %)
[2025-10-15 16:15:18] 2025-10-15 20:14:17,524 | INFO     | right removable region: 186
[2025-10-15 16:15:18] 2025-10-15 20:14:17,524 | INFO     | sum of square deviations: 2027375961.8074872
[2025-10-15 16:15:18] 2025-10-15 20:14:17,525 | INFO     | sum of deviations: -55931807904.08554
[2025-10-15 16:15:18] 2025-10-15 20:14:17,525 | INFO     | mean x: 1760553568.8502674
[2025-10-15 16:15:18] 2025-10-15 20:14:17,526 | INFO     | mean y: 2265428.7112299465
[2025-10-15 16:15:18] 2025-10-15 20:14:17,526 | INFO     | -- intersect: 48572903471.590355
[2025-10-15 16:15:18] 2025-10-15 20:14:17,526 | INFO     | intersect: 48572903471.590355
[2025-10-15 16:15:18] 2025-10-15 20:14:17,526 | INFO     | chi2: 1.1470611997289266
[2025-10-15 16:15:18] 2025-10-15 20:14:17,526 | INFO     | current chi2=1.1470611997289266 (change=61.57631447726438 %)
[2025-10-15 16:15:18] 2025-10-15 20:14:17,527 | INFO     | sum of square deviations: 1868989610.5934007
[2025-10-15 16:15:18] 2025-10-15 20:14:17,528 | INFO     | sum of deviations: -56189860899.90111
[2025-10-15 16:15:18] 2025-10-15 20:14:17,528 | INFO     | mean x: 1760553721.3736265
[2025-10-15 16:15:18] 2025-10-15 20:14:17,528 | INFO     | mean y: 2265581.395604396
[2025-10-15 16:15:18] 2025-10-15 20:14:17,528 | INFO     | -- intersect: 52932077577.18232
[2025-10-15 16:15:18] 2025-10-15 20:14:17,528 | INFO     | intersect: 52932077577.18232
[2025-10-15 16:15:18] 2025-10-15 20:14:17,529 | INFO     | chi2: 1.079945533509798
[2025-10-15 16:15:18] 2025-10-15 20:14:17,529 | INFO     | current chi2=1.079945533509798 (change=5.851097241802734 %)
[2025-10-15 16:15:18] 2025-10-15 20:14:17,529 | INFO     | left removable region: 20
[2025-10-15 16:15:18] 2025-10-15 20:14:17,529 | INFO     | sum of square deviations: 1418105841.957839
[2025-10-15 16:15:18] 2025-10-15 20:14:17,530 | INFO     | sum of deviations: -28890150429.8494
[2025-10-15 16:15:18] 2025-10-15 20:14:17,530 | INFO     | mean x: 1760553843.4036145
[2025-10-15 16:15:18] 2025-10-15 20:14:17,530 | INFO     | mean y: 2260479.4156626505
[2025-10-15 16:15:18] 2025-10-15 20:14:17,531 | INFO     | -- intersect: 35868881905.61251
[2025-10-15 16:15:18] 2025-10-15 20:14:17,531 | INFO     | intersect: 35868881905.61251
[2025-10-15 16:15:18] 2025-10-15 20:14:17,531 | INFO     | chi2: 0.3606394997314419
[2025-10-15 16:15:18] 2025-10-15 20:14:17,531 | INFO     | -- intersect: 35868881905.61251
[2025-10-15 16:15:18] 2025-10-15 20:14:17,531 | INFO     | current memory leak: -20.37 B/s (using 166 data points, chi2=0.36)
[2025-10-15 16:15:18] 2025-10-15 20:14:17,532 | INFO     | could have reported an average CPU frequency of 2617 MHz (10 samples)
[2025-10-15 16:15:18] 2025-10-15 20:14:17,532 | INFO     | ..............................
[2025-10-15 16:15:18] 2025-10-15 20:14:17,532 | INFO     | . Timing measurements:
[2025-10-15 16:15:18] 2025-10-15 20:14:17,533 | INFO     | . get job = 0 s
[2025-10-15 16:15:18] 2025-10-15 20:14:17,533 | INFO     | . initial setup = 3 s
[2025-10-15 16:15:18] 2025-10-15 20:14:17,533 | INFO     | . payload setup = 21 s
[2025-10-15 16:15:18] 2025-10-15 20:14:17,533 | INFO     | . stage-in = 0 s
[2025-10-15 16:15:18] 2025-10-15 20:14:17,533 | INFO     | . payload execution = 11667 s
[2025-10-15 16:15:18] 2025-10-15 20:14:17,533 | INFO     | . stage-out = 2 s
[2025-10-15 16:15:18] 2025-10-15 20:14:17,533 | INFO     | . log creation = 0 s
[2025-10-15 16:15:18] 2025-10-15 20:14:17,533 | INFO     | ..............................
[2025-10-15 16:15:18] 2025-10-15 20:14:17,637 | INFO     | 
[2025-10-15 16:15:18] 2025-10-15 20:14:17,638 | INFO     | job summary report
[2025-10-15 16:15:18] 2025-10-15 20:14:17,638 | INFO     | --------------------------------------------------
[2025-10-15 16:15:18] 2025-10-15 20:14:17,638 | INFO     | PanDA job id: 6845708097
[2025-10-15 16:15:18] 2025-10-15 20:14:17,638 | INFO     | task id: 46776533
[2025-10-15 16:15:18] 2025-10-15 20:14:17,638 | INFO     | errors: (none)
[2025-10-15 16:15:18] 2025-10-15 20:14:17,638 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-15 16:15:18] 2025-10-15 20:14:17,638 | INFO     | pilot state: finished 
[2025-10-15 16:15:18] 2025-10-15 20:14:17,639 | INFO     | transexitcode: 0
[2025-10-15 16:15:18] 2025-10-15 20:14:17,639 | INFO     | exeerrorcode: 0
[2025-10-15 16:15:18] 2025-10-15 20:14:17,639 | INFO     | exeerrordiag: 
[2025-10-15 16:15:18] 2025-10-15 20:14:17,639 | INFO     | exitcode: 0
[2025-10-15 16:15:18] 2025-10-15 20:14:17,639 | INFO     | exitmsg: OK
[2025-10-15 16:15:18] 2025-10-15 20:14:17,639 | INFO     | cpuconsumptiontime: 51896 s
[2025-10-15 16:15:18] 2025-10-15 20:14:17,639 | INFO     | nevents: 400
[2025-10-15 16:15:18] 2025-10-15 20:14:17,639 | INFO     | neventsw: 0
[2025-10-15 16:15:18] 2025-10-15 20:14:17,639 | INFO     | pid: 1219794
[2025-10-15 16:15:18] 2025-10-15 20:14:17,639 | INFO     | pgrp: 1219794
[2025-10-15 16:15:18] 2025-10-15 20:14:17,640 | INFO     | corecount: 9
[2025-10-15 16:15:18] 2025-10-15 20:14:17,640 | INFO     | event service: False
[2025-10-15 16:15:18] 2025-10-15 20:14:17,640 | INFO     | sizes: {0: 2348700, 1: 2348955, 2: 2348955, 10: 2349245, 12: 2349273, 11692: 2378557, 11693: 2378684, 11696: 2387738, 11698: 2387794, 11704: 2387988}
[2025-10-15 16:15:18] 2025-10-15 20:14:17,640 | INFO     | --------------------------------------------------
[2025-10-15 16:15:18] 2025-10-15 20:14:17,640 | INFO     | 
[2025-10-15 16:15:18] 2025-10-15 20:14:17,640 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-15 16:15:18] 2025-10-15 20:14:17,667 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-15 16:15:18] 2025-10-15 20:14:17,667 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-15 16:15:18] 2025-10-15 20:14:17,667 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-15 16:15:18] 2025-10-15 20:14:17,667 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-15 16:15:18] 2025-10-15 20:14:17,667 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-15 16:15:18] 2025-10-15 20:14:17,668 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-15 16:15:18] 2025-10-15 20:14:17,668 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-15 16:15:18] 2025-10-15 20:14:17,668 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-15 16:15:18] 2025-10-15 20:14:17,668 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-15 16:15:18] 2025-10-15 20:14:17,668 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-15 16:15:18] 2025-10-15 20:14:17,668 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-15 16:15:18] 2025-10-15 20:14:17,668 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-15 16:15:18] 2025-10-15 20:14:17,668 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-15 16:15:18] 2025-10-15 20:14:17,668 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-15 16:15:18] 2025-10-15 20:14:17,668 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-15 16:15:18] 2025-10-15 20:14:17,669 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-15 16:15:18] 2025-10-15 20:14:17,669 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-15 16:15:18] 2025-10-15 20:14:17,669 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-15 16:15:18] 2025-10-15 20:14:17,669 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-15 16:15:18] 2025-10-15 20:14:17,669 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-15 16:15:18] 2025-10-15 20:14:17,669 | INFO     | job 6845708097 has completed (purged errors)
[2025-10-15 16:15:18] 2025-10-15 20:14:17,669 | INFO     | overall cleanup function is called
[2025-10-15 16:15:18] 2025-10-15 20:14:18,677 | INFO     | --- collectZombieJob: --- 10, [1219794]
[2025-10-15 16:15:18] 2025-10-15 20:14:18,678 | INFO     | zombie collector waiting for pid 1219794
[2025-10-15 16:15:18] 2025-10-15 20:14:18,678 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-15 16:15:18] 2025-10-15 20:14:18,678 | INFO     | collected zombie processes
[2025-10-15 16:15:18] 2025-10-15 20:14:18,678 | INFO     | will attempt to kill all subprocesses of pid=1219794
[2025-10-15 16:15:18] 2025-10-15 20:14:19,014 | INFO     | process IDs to be killed: [1219794] (in reverse order)
[2025-10-15 16:15:18] 2025-10-15 20:14:19,160 | WARNING  | found no corresponding commands to process id(s)
[2025-10-15 16:15:18] 2025-10-15 20:14:19,160 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-15 16:15:18] 2025-10-15 20:14:19,170 | INFO     | did not find any defunct processes belonging to 1219794
[2025-10-15 16:15:18] 2025-10-15 20:14:19,179 | INFO     | did not find any defunct processes belonging to 1219794
[2025-10-15 16:15:18] 2025-10-15 20:14:19,179 | INFO     | ready for new job
[2025-10-15 16:15:18] 2025-10-15 20:14:19,179 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-15 16:15:18] 2025-10-15 20:14:19,181 | INFO     | ***************************************
[2025-10-15 16:15:18] 2025-10-15 20:14:19,181 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-15 16:15:18] 2025-10-15 20:14:19,181 | INFO     | ***************************************
[2025-10-15 16:15:18] 2025-10-15 20:14:19,181 | INFO     | 
[2025-10-15 16:15:18] 2025-10-15 20:14:19,195 | INFO     | architecture information:
[2025-10-15 16:15:18] 2025-10-15 20:14:19,195 | INFO     | executing command: cat /etc/os-release
[2025-10-15 16:15:18] 2025-10-15 20:14:19,216 | INFO     | cat /etc/os-release:
[2025-10-15 16:15:18] NAME="CentOS Linux"
[2025-10-15 16:15:18] VERSION="7 (Core)"
[2025-10-15 16:15:18] ID="centos"
[2025-10-15 16:15:18] ID_LIKE="rhel fedora"
[2025-10-15 16:15:18] VERSION_ID="7"
[2025-10-15 16:15:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-15 16:15:18] ANSI_COLOR="0;31"
[2025-10-15 16:15:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-15 16:15:18] HOME_URL="https://www.centos.org/"
[2025-10-15 16:15:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-15 16:15:18] 
[2025-10-15 16:15:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-15 16:15:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-15 16:15:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-15 16:15:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-15 16:15:18] 
[2025-10-15 16:15:18] 2025-10-15 20:14:19,216 | INFO     | ***************************************
[2025-10-15 16:15:18] 2025-10-15 20:14:19,719 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-15 16:15:18] 2025-10-15 20:14:19,851 | INFO     | sufficient remaining disk space (76522979328 B)
[2025-10-15 16:15:18] 2025-10-15 20:14:19,852 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-15 16:15:18] 2025-10-15 20:14:19,852 | INFO     | current server update state: UPDATING_FINAL
[2025-10-15 16:15:18] 2025-10-15 20:14:19,852 | INFO     | update_server=False
[2025-10-15 16:15:18] 2025-10-15 20:14:19,852 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-15 16:15:18] 2025-10-15 20:14:19,852 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-15 16:15:18] 2025-10-15 20:14:20,047 | INFO     | all data control threads have been joined
[2025-10-15 16:15:18] 2025-10-15 20:14:20,312 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-15 16:15:18] 2025-10-15 20:14:20,313 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-15 16:15:18] 2025-10-15 20:14:20,313 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-15 16:15:18] 2025-10-15 20:14:20,313 | INFO     | will abort loop
[2025-10-15 16:15:18] 2025-10-15 20:14:20,458 | INFO     | all payload control threads have been joined
[2025-10-15 16:15:18] 2025-10-15 20:14:20,857 | INFO     | [job] retrieve thread has finished
[2025-10-15 16:15:18] 2025-10-15 20:14:20,861 | INFO     | all job control threads have been joined
[2025-10-15 16:15:18] 2025-10-15 20:14:21,052 | INFO     | [data] control thread has finished
[2025-10-15 16:15:18] 2025-10-15 20:14:21,092 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-15 16:15:18] 2025-10-15 20:14:21,221 | INFO     | [payload] validate_post thread has finished
[2025-10-15 16:15:18] 2025-10-15 20:14:21,248 | INFO     | [payload] validate_pre thread has finished
[2025-10-15 16:15:18] 2025-10-15 20:14:21,277 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-15 16:15:18] 2025-10-15 20:14:21,319 | INFO     | [job] job monitor thread has finished
[2025-10-15 16:15:18] 2025-10-15 20:14:21,344 | INFO     | [payload] failed_post thread has finished
[2025-10-15 16:15:18] 2025-10-15 20:14:21,464 | INFO     | [payload] control thread has finished
[2025-10-15 16:15:18] 2025-10-15 20:14:21,725 | INFO     | [payload] execute_payloads thread has finished
[2025-10-15 16:15:18] 2025-10-15 20:14:21,858 | INFO     | [data] copytool_out thread has finished
[2025-10-15 16:15:18] 2025-10-15 20:14:21,867 | INFO     | [job] control thread has finished
[2025-10-15 16:15:18] 2025-10-15 20:14:22,032 | INFO     | [data] copytool_in thread has finished
[2025-10-15 16:15:18] 2025-10-15 20:14:22,042 | INFO     | [job] validate thread has finished
[2025-10-15 16:15:18] 2025-10-15 20:14:22,098 | INFO     | [job] create_data_payload thread has finished
[2025-10-15 16:15:18] 2025-10-15 20:14:22,647 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-15 16:15:18] 2025-10-15 20:14:23,652 | INFO     | [job] queue monitor thread has finished
[2025-10-15 16:15:18] 2025-10-15 20:14:25,285 | INFO     | [data] queue_monitor thread has finished
[2025-10-15 16:15:18] 2025-10-15 20:14:50,466 | INFO     | PID=1208705 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-15 16:15:18] 2025-10-15 20:14:50,466 | INFO     | .. there are 26 such processes running
[2025-10-15 16:15:18] 2025-10-15 20:14:50,467 | INFO     | found 0 job(s) in 20 queues
[2025-10-15 16:15:18] 2025-10-15 20:14:50,467 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-15 16:15:18] 2025-10-15 20:14:50,467 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-15 16:15:18] 2025-10-15 20:15:11,492 | INFO     | [monitor] cgroup control has ended
[2025-10-15 16:15:18] 2025-10-15 20:15:13,412 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140258903807808)>', '<ExcThread(monitor, started 140257517364992)>']
[2025-10-15 16:15:18] 2025-10-15 20:15:13,582 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-15 16:15:18] 2025-10-15 20:15:13,582 | INFO     | [monitor] control thread has ended
[2025-10-15 16:15:18] 2025-10-15 20:15:18,438 | INFO     | all workflow threads have been joined
[2025-10-15 16:15:18] 2025-10-15 20:15:18,438 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-15 16:15:18] 2025-10-15 20:15:18,439 | INFO     | traces error code: 0
[2025-10-15 16:15:18] 2025-10-15 20:15:18,439 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-15 16:15:18] 2025-10-15 20:15:18,641 [wrapper] ==== pilot stdout END ====
[2025-10-15 16:15:18] 2025-10-15 20:15:18,644 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-15 16:15:18] 2025-10-15 20:15:18,647 [wrapper] pilotpid: 1208705
[2025-10-15 16:15:18] 2025-10-15 20:15:18,651 [wrapper] Pilot exit status: 0
[2025-10-15 16:15:18] 2025-10-15 20:15:18,663 [wrapper] pandaids: 6845708097
[2025-10-15 16:15:18] 2025-10-15 20:15:18,750 [wrapper] cleanup supervisor_pilot 2531192 1208706
[2025-10-15 16:15:18] 2025-10-15 20:15:18,753 [wrapper] Test setup, not cleaning
[2025-10-15 16:15:18] 2025-10-15 20:15:18,756 [wrapper] apfmon messages muted
[2025-10-15 16:15:18] 2025-10-15 20:15:18,759 [wrapper] ==== wrapper stdout END ====
[2025-10-15 16:15:18] 2025-10-15 20:15:18,762 [wrapper] ==== wrapper stderr END ====
[2025-10-15 16:15:18]  *** Error codes and diagnostics ***
[2025-10-15 16:15:18]     "exeErrorCode": 0,
[2025-10-15 16:15:18]     "exeErrorDiag": "",
[2025-10-15 16:15:18]     "pilotErrorCode": 0,
[2025-10-15 16:15:18]     "pilotErrorDiag": "",
[2025-10-15 16:15:18]  *** Listing of results directory ***
[2025-10-15 16:15:18] total 427040
[2025-10-15 16:15:18] -rw-r--r--. 1 boincer umatlas    557409 Oct 15 05:36 pilot3.tar.gz
[2025-10-15 16:15:18] -rw-r--r--. 1 boincer umatlas      5112 Oct 15 06:04 queuedata.json
[2025-10-15 16:15:18] -rwx------. 1 boincer umatlas     36292 Oct 15 06:08 runpilot2-wrapper.sh
[2025-10-15 16:15:18] -rw-r--r--. 1 boincer umatlas       100 Oct 15 12:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-15 16:15:18] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 15 12:58 run_atlas
[2025-10-15 16:15:18] -rw-r--r--. 1 boincer umatlas       105 Oct 15 12:58 job.xml
[2025-10-15 16:15:18] -rw-r--r--. 2 boincer umatlas 226741942 Oct 15 12:58 EVNT.46776529._000247.pool.root.1
[2025-10-15 16:15:18] drwxrwx--x. 2 boincer umatlas      4096 Oct 15 12:58 shared
[2025-10-15 16:15:18] -rw-r--r--. 2 boincer umatlas    569680 Oct 15 12:58 input.tar.gz
[2025-10-15 16:15:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 15 12:58 start_atlas.sh
[2025-10-15 16:15:18] -rw-r--r--. 1 boincer umatlas         0 Oct 15 12:58 boinc_lockfile
[2025-10-15 16:15:18] -rw-r--r--. 1 boincer umatlas      2559 Oct 15 12:58 pandaJob.out
[2025-10-15 16:15:18] -rw-------. 1 boincer umatlas    973863 Oct 15 12:58 agis_schedconf.cvmfs.json
[2025-10-15 16:15:18] drwx------. 5 boincer umatlas      4096 Oct 15 12:58 pilot3
[2025-10-15 16:15:18] -rw-r--r--. 1 boincer umatlas      6659 Oct 15 16:12 init_data.xml
[2025-10-15 16:15:18] -rw-------. 1 boincer umatlas 202902659 Oct 15 16:13 HITS.46776533._004807.pool.root.1
[2025-10-15 16:15:18] -rw-r--r--. 1 boincer umatlas       531 Oct 15 16:13 boinc_task_state.xml
[2025-10-15 16:15:18] -rw-------. 1 boincer umatlas      1047 Oct 15 16:14 memory_monitor_summary.json
[2025-10-15 16:15:18] -rw-------. 1 boincer umatlas        95 Oct 15 16:14 pilot_heartbeat.json
[2025-10-15 16:15:18] -rw-------. 1 boincer umatlas   1560740 Oct 15 16:14 agis_ddmendpoints.agis.ALL.json
[2025-10-15 16:15:18] -rw-------. 1 boincer umatlas    426793 Oct 15 16:14 log.46776533._004807.job.log.tgz.1
[2025-10-15 16:15:18] -rw-------. 1 boincer umatlas      7824 Oct 15 16:14 heartbeat.json
[2025-10-15 16:15:18] -rw-------. 1 boincer umatlas      5010 Oct 15 16:15 pilotlog.txt
[2025-10-15 16:15:18] -rw-r--r--. 1 boincer umatlas      8192 Oct 15 16:15 boinc_mmap_file
[2025-10-15 16:15:18] -rw-r--r--. 1 boincer umatlas        28 Oct 15 16:15 wrapper_checkpoint.txt
[2025-10-15 16:15:18] -rw-------. 1 boincer umatlas   1444230 Oct 15 16:15 log.46776533._004807.job.log.1
[2025-10-15 16:15:18] -rw-------. 1 boincer umatlas       357 Oct 15 16:15 output.list
[2025-10-15 16:15:18] -rw-r--r--. 1 boincer umatlas       620 Oct 15 16:15 runtime_log
[2025-10-15 16:15:18] -rw-------. 1 boincer umatlas   1894400 Oct 15 16:15 result.tar.gz
[2025-10-15 16:15:18] -rw-------. 1 boincer umatlas       654 Oct 15 16:15 Y2jMDmfbDT8n9Rq4apOajLDm4fhM0noT9bVof3QYDmhKWMDmZpqVFm.diag
[2025-10-15 16:15:18] -rw-r--r--. 1 boincer umatlas      8694 Oct 15 16:15 runtime_log.err
[2025-10-15 16:15:18] -rw-r--r--. 1 boincer umatlas     21201 Oct 15 16:15 stderr.txt
[2025-10-15 16:15:18] HITS file was successfully produced:
[2025-10-15 16:15:18] -rw-------. 1 boincer umatlas 202902659 Oct 15 16:13 shared/HITS.pool.root.1
[2025-10-15 16:15:18]  *** Contents of shared directory: ***
[2025-10-15 16:15:18] total 422008
[2025-10-15 16:15:18] -rw-r--r--. 2 boincer umatlas 226741942 Oct 15 12:58 ATLAS.root_0
[2025-10-15 16:15:18] -rw-r--r--. 2 boincer umatlas    569680 Oct 15 12:58 input.tar.gz
[2025-10-15 16:15:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 15 12:58 start_atlas.sh
[2025-10-15 16:15:18] -rw-------. 1 boincer umatlas 202902659 Oct 15 16:13 HITS.pool.root.1
[2025-10-15 16:15:18] -rw-------. 1 boincer umatlas   1894400 Oct 15 16:15 result.tar.gz
16:15:20 (1204355): run_atlas exited; CPU time 52175.505999
16:15:20 (1204355): called boinc_finish(0)

</stderr_txt>
]]>

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