Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:21:59 (2101852): wrapper (7.7.26015): starting
06:21:59 (2101852): wrapper: running run_atlas (--nthreads 4)
[2025-10-16 06:21:59] Arguments: --nthreads 4
[2025-10-16 06:21:59] Threads: 4
[2025-10-16 06:21:59] Checking for CVMFS
[2025-10-16 06:21:59] No cvmfs_config command found, will try listing directly
[2025-10-16 06:21:59] CVMFS is ok
[2025-10-16 06:21:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-16 06:21:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-16 06:21:59] Further information can be found at the LHC@home message board.
[2025-10-16 06:21:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-16 06:21:59] Checking for apptainer binary...
[2025-10-16 06:21:59] which: no apptainer in ((null))
[2025-10-16 06:21:59] apptainer is not installed, using version from CVMFS
[2025-10-16 06:21:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-16 06:21:59] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-10-16 06:21:59] apptainer works
[2025-10-16 06:21:59] Set ATHENA_PROC_NUMBER=4
[2025-10-16 06:21:59] Set ATHENA_CORE_NUMBER=4
[2025-10-16 06:21:59] Starting ATLAS job with PandaID=6845695587
[2025-10-16 06:21:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-16 09:03:12]  *** The last 200 lines of the pilot log: ***
[2025-10-16 09:03:12] 2025-10-16 07:00:56,137 | INFO     | fitting pss+swap vs Time
[2025-10-16 09:03:12] 2025-10-16 07:00:56,137 | INFO     | sum of square deviations: 1177156955.0
[2025-10-16 09:03:12] 2025-10-16 07:00:56,138 | INFO     | sum of deviations: -12512204557.5
[2025-10-16 09:03:12] 2025-10-16 07:00:56,138 | INFO     | mean x: 1760593293.5
[2025-10-16 09:03:12] 2025-10-16 07:00:56,139 | INFO     | mean y: 2352306.480769231
[2025-10-16 09:03:12] 2025-10-16 07:00:56,139 | INFO     | -- intersect: 18716002459.30566
[2025-10-16 09:03:12] 2025-10-16 07:00:56,139 | INFO     | intersect: 18716002459.30566
[2025-10-16 09:03:12] 2025-10-16 07:00:56,139 | INFO     | chi2: 1.9874444654551846
[2025-10-16 09:03:12] 2025-10-16 07:00:56,139 | INFO     | sum of square deviations: 1067554900.0
[2025-10-16 09:03:12] 2025-10-16 07:00:56,140 | INFO     | sum of deviations: -3080457849.000001
[2025-10-16 09:03:12] 2025-10-16 07:00:56,140 | INFO     | mean x: 1760593141.0
[2025-10-16 09:03:12] 2025-10-16 07:00:56,140 | INFO     | mean y: 2365106.2450331124
[2025-10-16 09:03:12] 2025-10-16 07:00:56,140 | INFO     | -- intersect: 5082603096.899205
[2025-10-16 09:03:12] 2025-10-16 07:00:56,140 | INFO     | intersect: 5082603096.899205
[2025-10-16 09:03:12] 2025-10-16 07:00:56,141 | INFO     | chi2: 1.3275111126813683
[2025-10-16 09:03:12] 2025-10-16 07:00:56,141 | INFO     | current chi2=1.3275111126813683 (change=33.205121664754124 %)
[2025-10-16 09:03:12] 2025-10-16 07:00:56,141 | INFO     | sum of square deviations: 964976232.5
[2025-10-16 09:03:12] 2025-10-16 07:00:56,142 | INFO     | sum of deviations: -2756399131.0000005
[2025-10-16 09:03:12] 2025-10-16 07:00:56,142 | INFO     | mean x: 1760592988.5
[2025-10-16 09:03:12] 2025-10-16 07:00:56,142 | INFO     | mean y: 2365588.205479452
[2025-10-16 09:03:12] 2025-10-16 07:00:56,142 | INFO     | -- intersect: 5031398242.174078
[2025-10-16 09:03:12] 2025-10-16 07:00:56,142 | INFO     | intersect: 5031398242.174078
[2025-10-16 09:03:12] 2025-10-16 07:00:56,143 | INFO     | chi2: 1.327601258532922
[2025-10-16 09:03:12] 2025-10-16 07:00:56,143 | INFO     | current chi2=1.327601258532922 (change=-0.006790591106357376 %)
[2025-10-16 09:03:12] 2025-10-16 07:00:56,143 | INFO     | right removable region: 145
[2025-10-16 09:03:12] 2025-10-16 07:00:56,143 | INFO     | sum of square deviations: 1067554900.0
[2025-10-16 09:03:12] 2025-10-16 07:00:56,144 | INFO     | sum of deviations: -30196784493.999996
[2025-10-16 09:03:12] 2025-10-16 07:00:56,144 | INFO     | mean x: 1760593446.0
[2025-10-16 09:03:12] 2025-10-16 07:00:56,144 | INFO     | mean y: 2376440.0529801324
[2025-10-16 09:03:12] 2025-10-16 07:00:56,144 | INFO     | -- intersect: 49802401591.36915
[2025-10-16 09:03:12] 2025-10-16 07:00:56,144 | INFO     | intersect: 49802401591.36915
[2025-10-16 09:03:12] 2025-10-16 07:00:56,144 | INFO     | chi2: 0.7343445239859279
[2025-10-16 09:03:12] 2025-10-16 07:00:56,145 | INFO     | current chi2=0.7343445239859279 (change=63.05081541899885 %)
[2025-10-16 09:03:12] 2025-10-16 07:00:56,145 | INFO     | sum of square deviations: 964976232.5
[2025-10-16 09:03:12] 2025-10-16 07:00:56,146 | INFO     | sum of deviations: -27482607733.0
[2025-10-16 09:03:12] 2025-10-16 07:00:56,146 | INFO     | mean x: 1760593598.5
[2025-10-16 09:03:12] 2025-10-16 07:00:56,146 | INFO     | mean y: 2372395.5753424657
[2025-10-16 09:03:12] 2025-10-16 07:00:56,146 | INFO     | -- intersect: 50144232490.35896
[2025-10-16 09:03:12] 2025-10-16 07:00:56,146 | INFO     | intersect: 50144232490.35896
[2025-10-16 09:03:12] 2025-10-16 07:00:56,146 | INFO     | chi2: 0.7344608965300123
[2025-10-16 09:03:12] 2025-10-16 07:00:56,146 | INFO     | current chi2=0.7344608965300123 (change=-0.0158471317322311 %)
[2025-10-16 09:03:12] 2025-10-16 07:00:56,146 | INFO     | left removable region: 20
[2025-10-16 09:03:12] 2025-10-16 07:00:56,147 | INFO     | sum of square deviations: 605592750.0
[2025-10-16 09:03:12] 2025-10-16 07:00:56,147 | INFO     | sum of deviations: -11561658302.0
[2025-10-16 09:03:12] 2025-10-16 07:00:56,147 | INFO     | mean x: 1760593568.0
[2025-10-16 09:03:12] 2025-10-16 07:00:56,147 | INFO     | mean y: 2377296.656
[2025-10-16 09:03:12] 2025-10-16 07:00:56,148 | INFO     | -- intersect: 33614703801.415184
[2025-10-16 09:03:12] 2025-10-16 07:00:56,148 | INFO     | intersect: 33614703801.415184
[2025-10-16 09:03:12] 2025-10-16 07:00:56,148 | INFO     | chi2: 0.041288352023699
[2025-10-16 09:03:12] 2025-10-16 07:00:56,148 | INFO     | -- intersect: 33614703801.415184
[2025-10-16 09:03:12] 2025-10-16 07:00:56,148 | INFO     | current memory leak: -19.09 B/s (using 125 data points, chi2=0.04)
[2025-10-16 09:03:12] 2025-10-16 07:00:56,148 | INFO     | could have reported an average CPU frequency of 2722 MHz (9 samples)
[2025-10-16 09:03:12] 2025-10-16 07:00:56,149 | INFO     | ..............................
[2025-10-16 09:03:12] 2025-10-16 07:00:56,149 | INFO     | . Timing measurements:
[2025-10-16 09:03:12] 2025-10-16 07:00:56,149 | INFO     | . get job = 0 s
[2025-10-16 09:03:12] 2025-10-16 07:00:56,149 | INFO     | . initial setup = 1 s
[2025-10-16 09:03:12] 2025-10-16 07:00:56,149 | INFO     | . payload setup = 8 s
[2025-10-16 09:03:12] 2025-10-16 07:00:56,149 | INFO     | . stage-in = 0 s
[2025-10-16 09:03:12] 2025-10-16 07:00:56,149 | INFO     | . payload execution = 9483 s
[2025-10-16 09:03:12] 2025-10-16 07:00:56,149 | INFO     | . stage-out = 0 s
[2025-10-16 09:03:12] 2025-10-16 07:00:56,149 | INFO     | . log creation = 0 s
[2025-10-16 09:03:12] 2025-10-16 07:00:56,149 | INFO     | ..............................
[2025-10-16 09:03:12] 2025-10-16 07:00:56,249 | INFO     | 
[2025-10-16 09:03:12] 2025-10-16 07:00:56,249 | INFO     | job summary report
[2025-10-16 09:03:12] 2025-10-16 07:00:56,249 | INFO     | --------------------------------------------------
[2025-10-16 09:03:12] 2025-10-16 07:00:56,249 | INFO     | PanDA job id: 6845695587
[2025-10-16 09:03:12] 2025-10-16 07:00:56,249 | INFO     | task id: 46776533
[2025-10-16 09:03:12] 2025-10-16 07:00:56,249 | INFO     | errors: (none)
[2025-10-16 09:03:12] 2025-10-16 07:00:56,249 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-16 09:03:12] 2025-10-16 07:00:56,249 | INFO     | pilot state: finished 
[2025-10-16 09:03:12] 2025-10-16 07:00:56,250 | INFO     | transexitcode: 0
[2025-10-16 09:03:12] 2025-10-16 07:00:56,250 | INFO     | exeerrorcode: 0
[2025-10-16 09:03:12] 2025-10-16 07:00:56,250 | INFO     | exeerrordiag: 
[2025-10-16 09:03:12] 2025-10-16 07:00:56,250 | INFO     | exitcode: 0
[2025-10-16 09:03:12] 2025-10-16 07:00:56,250 | INFO     | exitmsg: OK
[2025-10-16 09:03:12] 2025-10-16 07:00:56,250 | INFO     | cpuconsumptiontime: 36446 s
[2025-10-16 09:03:12] 2025-10-16 07:00:56,250 | INFO     | nevents: 400
[2025-10-16 09:03:12] 2025-10-16 07:00:56,250 | INFO     | neventsw: 0
[2025-10-16 09:03:12] 2025-10-16 07:00:56,250 | INFO     | pid: 2129313
[2025-10-16 09:03:12] 2025-10-16 07:00:56,250 | INFO     | pgrp: 2129313
[2025-10-16 09:03:12] 2025-10-16 07:00:56,250 | INFO     | corecount: 4
[2025-10-16 09:03:12] 2025-10-16 07:00:56,250 | INFO     | event service: False
[2025-10-16 09:03:12] 2025-10-16 07:00:56,250 | INFO     | sizes: {0: 2348714, 1: 2348969, 7: 2349231, 12: 2349259, 9495: 2378152, 9497: 2387358, 9505: 2387560}
[2025-10-16 09:03:12] 2025-10-16 07:00:56,250 | INFO     | --------------------------------------------------
[2025-10-16 09:03:12] 2025-10-16 07:00:56,251 | INFO     | 
[2025-10-16 09:03:12] 2025-10-16 07:00:56,251 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/0
[2025-10-16 09:03:12] 2025-10-16 07:00:56,281 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-16 09:03:12] 2025-10-16 07:00:56,282 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-16 09:03:12] 2025-10-16 07:00:56,282 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-16 09:03:12] 2025-10-16 07:00:56,282 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-16 09:03:12] 2025-10-16 07:00:56,282 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-16 09:03:12] 2025-10-16 07:00:56,282 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-16 09:03:12] 2025-10-16 07:00:56,282 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-16 09:03:12] 2025-10-16 07:00:56,282 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-16 09:03:12] 2025-10-16 07:00:56,282 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-16 09:03:12] 2025-10-16 07:00:56,282 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-16 09:03:12] 2025-10-16 07:00:56,282 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-16 09:03:12] 2025-10-16 07:00:56,282 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-16 09:03:12] 2025-10-16 07:00:56,283 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-16 09:03:12] 2025-10-16 07:00:56,283 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-16 09:03:12] 2025-10-16 07:00:56,283 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-16 09:03:12] 2025-10-16 07:00:56,283 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-16 09:03:12] 2025-10-16 07:00:56,283 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-16 09:03:12] 2025-10-16 07:00:56,283 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-16 09:03:12] 2025-10-16 07:00:56,283 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-16 09:03:12] 2025-10-16 07:00:56,283 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-16 09:03:12] 2025-10-16 07:00:56,283 | INFO     | job 6845695587 has completed (purged errors)
[2025-10-16 09:03:12] 2025-10-16 07:00:56,284 | INFO     | overall cleanup function is called
[2025-10-16 09:03:12] 2025-10-16 07:00:57,291 | INFO     | --- collectZombieJob: --- 10, [2129313]
[2025-10-16 09:03:12] 2025-10-16 07:00:57,292 | INFO     | zombie collector waiting for pid 2129313
[2025-10-16 09:03:12] 2025-10-16 07:00:57,292 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-16 09:03:12] 2025-10-16 07:00:57,292 | INFO     | collected zombie processes
[2025-10-16 09:03:12] 2025-10-16 07:00:57,292 | INFO     | will attempt to kill all subprocesses of pid=2129313
[2025-10-16 09:03:12] 2025-10-16 07:00:58,032 | INFO     | process IDs to be killed: [2129313] (in reverse order)
[2025-10-16 09:03:12] 2025-10-16 07:00:58,267 | WARNING  | found no corresponding commands to process id(s)
[2025-10-16 09:03:12] 2025-10-16 07:00:58,268 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-16 09:03:12] 2025-10-16 07:00:58,296 | INFO     | did not find any defunct processes belonging to 2129313
[2025-10-16 09:03:12] 2025-10-16 07:00:58,325 | INFO     | did not find any defunct processes belonging to 2129313
[2025-10-16 09:03:12] 2025-10-16 07:00:58,325 | INFO     | ready for new job
[2025-10-16 09:03:12] 2025-10-16 07:00:58,325 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-16 09:03:12] 2025-10-16 07:00:58,327 | INFO     | ***************************************
[2025-10-16 09:03:12] 2025-10-16 07:00:58,328 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-16 09:03:12] 2025-10-16 07:00:58,328 | INFO     | ***************************************
[2025-10-16 09:03:12] 2025-10-16 07:00:58,328 | INFO     | 
[2025-10-16 09:03:12] 2025-10-16 07:00:58,336 | INFO     | architecture information:
[2025-10-16 09:03:12] 2025-10-16 07:00:58,336 | INFO     | executing command: cat /etc/os-release
[2025-10-16 09:03:12] 2025-10-16 07:00:58,359 | INFO     | cat /etc/os-release:
[2025-10-16 09:03:12] NAME="CentOS Linux"
[2025-10-16 09:03:12] VERSION="7 (Core)"
[2025-10-16 09:03:12] ID="centos"
[2025-10-16 09:03:12] ID_LIKE="rhel fedora"
[2025-10-16 09:03:12] VERSION_ID="7"
[2025-10-16 09:03:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-16 09:03:12] ANSI_COLOR="0;31"
[2025-10-16 09:03:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-16 09:03:12] HOME_URL="https://www.centos.org/"
[2025-10-16 09:03:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-16 09:03:12] 
[2025-10-16 09:03:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-16 09:03:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-16 09:03:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-16 09:03:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-16 09:03:12] 
[2025-10-16 09:03:12] 2025-10-16 07:00:58,360 | INFO     | ***************************************
[2025-10-16 09:03:12] 2025-10-16 07:00:58,862 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/0
[2025-10-16 09:03:12] 2025-10-16 07:00:58,890 | INFO     | sufficient remaining disk space (3323408154624 B)
[2025-10-16 09:03:12] 2025-10-16 07:00:58,891 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-16 09:03:12] 2025-10-16 07:00:58,891 | INFO     | current server update state: UPDATING_FINAL
[2025-10-16 09:03:12] 2025-10-16 07:00:58,891 | INFO     | update_server=False
[2025-10-16 09:03:12] 2025-10-16 07:00:58,892 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-16 09:03:12] 2025-10-16 07:00:58,892 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-16 09:03:12] 2025-10-16 07:00:58,967 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-16 09:03:12] 2025-10-16 07:00:58,967 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-16 09:03:12] 2025-10-16 07:00:58,967 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-16 09:03:12] 2025-10-16 07:00:58,967 | INFO     | will abort loop
[2025-10-16 09:03:12] 2025-10-16 07:00:58,979 | INFO     | all payload control threads have been joined
[2025-10-16 09:03:12] 2025-10-16 07:00:59,893 | INFO     | [job] retrieve thread has finished
[2025-10-16 09:03:12] 2025-10-16 07:00:59,902 | INFO     | [payload] validate_post thread has finished
[2025-10-16 09:03:12] 2025-10-16 07:00:59,950 | INFO     | all data control threads have been joined
[2025-10-16 09:03:12] 2025-10-16 07:00:59,970 | INFO     | [payload] validate_pre thread has finished
[2025-10-16 09:03:12] 2025-10-16 07:00:59,973 | INFO     | [job] job monitor thread has finished
[2025-10-16 09:03:12] 2025-10-16 07:00:59,985 | INFO     | [payload] control thread has finished
[2025-10-16 09:03:12] 2025-10-16 07:01:00,028 | INFO     | all job control threads have been joined
[2025-10-16 09:03:12] 2025-10-16 07:01:00,033 | INFO     | [payload] failed_post thread has finished
[2025-10-16 09:03:12] 2025-10-16 07:01:00,197 | INFO     | [data] copytool_in thread has finished
[2025-10-16 09:03:12] 2025-10-16 07:01:00,336 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-16 09:03:12] 2025-10-16 07:01:00,497 | INFO     | [payload] execute_payloads thread has finished
[2025-10-16 09:03:12] 2025-10-16 07:01:00,955 | INFO     | [data] control thread has finished
[2025-10-16 09:03:12] 2025-10-16 07:01:01,033 | INFO     | [job] control thread has finished
[2025-10-16 09:03:12] 2025-10-16 07:01:01,212 | INFO     | [job] validate thread has finished
[2025-10-16 09:03:12] 2025-10-16 07:01:01,258 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-16 09:03:12] 2025-10-16 07:01:01,344 | INFO     | [job] create_data_payload thread has finished
[2025-10-16 09:03:12] 2025-10-16 07:01:02,263 | INFO     | [job] queue monitor thread has finished
[2025-10-16 09:03:12] 2025-10-16 07:01:02,342 | INFO     | [data] copytool_out thread has finished
[2025-10-16 09:03:12] 2025-10-16 07:01:02,897 | INFO     | [data] queue_monitor thread has finished
[2025-10-16 09:03:12] 2025-10-16 07:01:09,279 | INFO     | job.realtimelogging is not enabled
[2025-10-16 09:03:12] 2025-10-16 07:01:10,284 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-16 09:03:12] 2025-10-16 07:01:26,848 | INFO     | [monitor] cgroup control has ended
[2025-10-16 09:03:12] 2025-10-16 07:01:27,410 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22677607360320)>', '<ExcThread(monitor, started 22677370668800)>']
[2025-10-16 09:03:12] 2025-10-16 07:01:29,166 | INFO     | PID=2108985 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-16 09:03:12] 2025-10-16 07:01:29,167 | INFO     | .. there are 5 such processes running
[2025-10-16 09:03:12] 2025-10-16 07:01:29,167 | INFO     | found 0 job(s) in 20 queues
[2025-10-16 09:03:12] 2025-10-16 07:01:29,167 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-16 09:03:12] 2025-10-16 07:01:29,167 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-16 09:03:12] 2025-10-16 07:01:29,167 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-16 09:03:12] 2025-10-16 07:01:29,167 | INFO     | [monitor] control thread has ended
[2025-10-16 09:03:12] 2025-10-16 07:01:32,438 | INFO     | all workflow threads have been joined
[2025-10-16 09:03:12] 2025-10-16 07:01:32,438 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-16 09:03:12] 2025-10-16 07:01:32,439 | INFO     | traces error code: 0
[2025-10-16 09:03:12] 2025-10-16 07:01:32,439 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-16 09:03:12] 2025-10-16 07:01:32,600 [wrapper] ==== pilot stdout END ====
[2025-10-16 09:03:12] 2025-10-16 07:01:32,604 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-16 09:03:12] 2025-10-16 07:01:32,608 [wrapper] pilotpid: 2108985
[2025-10-16 09:03:12] 2025-10-16 07:01:32,611 [wrapper] Pilot exit status: 0
[2025-10-16 09:03:12] 2025-10-16 07:01:32,625 [wrapper] pandaids: 6845695587
[2025-10-16 09:03:12] 2025-10-16 07:01:32,786 [wrapper] cleanup supervisor_pilot 2396528 2108986
[2025-10-16 09:03:12] 2025-10-16 07:01:32,790 [wrapper] Test setup, not cleaning
[2025-10-16 09:03:12] 2025-10-16 07:01:32,793 [wrapper] apfmon messages muted
[2025-10-16 09:03:12] 2025-10-16 07:01:32,797 [wrapper] ==== wrapper stdout END ====
[2025-10-16 09:03:12] 2025-10-16 07:01:32,800 [wrapper] ==== wrapper stderr END ====
[2025-10-16 09:03:12]  *** Error codes and diagnostics ***
[2025-10-16 09:03:12]     "exeErrorCode": 0,
[2025-10-16 09:03:12]     "exeErrorDiag": "",
[2025-10-16 09:03:12]     "pilotErrorCode": 0,
[2025-10-16 09:03:12]     "pilotErrorDiag": "",
[2025-10-16 09:03:12]  *** Listing of results directory ***
[2025-10-16 09:03:12] total 428492
[2025-10-16 09:03:12] -rw-r--r-- 1 boinc boinc    557409 Oct 15 11:36 pilot3.tar.gz
[2025-10-16 09:03:12] -rw-r--r-- 1 boinc boinc      5112 Oct 15 11:46 queuedata.json
[2025-10-16 09:03:12] -rwx------ 1 boinc boinc     36292 Oct 15 11:47 runpilot2-wrapper.sh
[2025-10-16 09:03:12] -rw-r--r-- 1 boinc boinc       100 Oct 16 06:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-16 09:03:12] -rwxr-xr-x 1 boinc boinc      7986 Oct 16 06:21 run_atlas
[2025-10-16 09:03:12] -rw-r--r-- 1 boinc boinc       105 Oct 16 06:21 job.xml
[2025-10-16 09:03:12] -rw-r--r-- 2 boinc boinc 227379135 Oct 16 06:21 EVNT.46776529._000209.pool.root.1
[2025-10-16 09:03:12] -rw-r--r-- 1 boinc boinc      6688 Oct 16 06:21 init_data.xml
[2025-10-16 09:03:12] -rw-r--r-- 2 boinc boinc     15120 Oct 16 06:21 start_atlas.sh
[2025-10-16 09:03:12] drwxrwx--x 2 boinc boinc      4096 Oct 16 06:21 shared
[2025-10-16 09:03:12] -rw-r--r-- 2 boinc boinc    569684 Oct 16 06:21 input.tar.gz
[2025-10-16 09:03:12] -rw-r--r-- 1 boinc boinc         0 Oct 16 06:21 boinc_lockfile
[2025-10-16 09:03:12] -rw-r--r-- 1 boinc boinc      2561 Oct 16 06:21 pandaJob.out
[2025-10-16 09:03:12] -rw------- 1 boinc boinc    974310 Oct 16 06:22 agis_schedconf.cvmfs.json
[2025-10-16 09:03:12] -rw------- 1 boinc boinc   1560740 Oct 16 06:22 agis_ddmendpoints.agis.ALL.json
[2025-10-16 09:03:12] drwx------ 5 boinc boinc      4096 Oct 16 06:22 pilot3
[2025-10-16 09:03:12] -rw------- 1 boinc boinc 204114104 Oct 16 09:00 HITS.46776533._003876.pool.root.1
[2025-10-16 09:03:12] -rw-r--r-- 1 boinc boinc       528 Oct 16 09:00 boinc_task_state.xml
[2025-10-16 09:03:12] -rw------- 1 boinc boinc        95 Oct 16 09:00 pilot_heartbeat.json
[2025-10-16 09:03:12] -rw------- 1 boinc boinc      1025 Oct 16 09:00 memory_monitor_summary.json
[2025-10-16 09:03:12] -rw------- 1 boinc boinc    351852 Oct 16 09:00 log.46776533._003876.job.log.tgz.1
[2025-10-16 09:03:12] -rw------- 1 boinc boinc      7783 Oct 16 09:00 heartbeat.json
[2025-10-16 09:03:12] -rw------- 1 boinc boinc      5093 Oct 16 09:01 pilotlog.txt
[2025-10-16 09:03:12] -rw------- 1 boinc boinc   1338343 Oct 16 09:01 log.46776533._003876.job.log.1
[2025-10-16 09:03:12] -rw------- 1 boinc boinc       357 Oct 16 09:01 output.list
[2025-10-16 09:03:12] -rw-r--r-- 1 boinc boinc       620 Oct 16 09:01 runtime_log
[2025-10-16 09:03:12] -rw------- 1 boinc boinc   1710080 Oct 16 09:01 result.tar.gz
[2025-10-16 09:03:12] -rw-r--r-- 1 boinc boinc      9084 Oct 16 09:01 runtime_log.err
[2025-10-16 09:03:12] -rw------- 1 boinc boinc       662 Oct 16 09:01 JbhKDmlHDT8n9Rq4apOajLDm4fhM0noT9bVof3QYDmWDWMDmrPjDCo.diag
[2025-10-16 09:03:12] -rw-r--r-- 1 boinc boinc        26 Oct 16 09:03 wrapper_checkpoint.txt
[2025-10-16 09:03:12] -rw-r--r-- 1 boinc boinc      8192 Oct 16 09:03 boinc_mmap_file
[2025-10-16 09:03:12] -rw-r--r-- 1 boinc boinc     20672 Oct 16 09:03 stderr.txt
[2025-10-16 09:03:12] HITS file was successfully produced:
[2025-10-16 09:03:12] -rw------- 1 boinc boinc 204114104 Oct 16 09:00 shared/HITS.pool.root.1
[2025-10-16 09:03:12]  *** Contents of shared directory: ***
[2025-10-16 09:03:12] total 423640
[2025-10-16 09:03:12] -rw-r--r-- 2 boinc boinc 227379135 Oct 16 06:21 ATLAS.root_0
[2025-10-16 09:03:12] -rw-r--r-- 2 boinc boinc     15120 Oct 16 06:21 start_atlas.sh
[2025-10-16 09:03:12] -rw-r--r-- 2 boinc boinc    569684 Oct 16 06:21 input.tar.gz
[2025-10-16 09:03:12] -rw------- 1 boinc boinc 204114104 Oct 16 09:00 HITS.pool.root.1
[2025-10-16 09:03:12] -rw------- 1 boinc boinc   1710080 Oct 16 09:01 result.tar.gz
09:03:13 (2101852): run_atlas exited; CPU time 37086.501089
09:03:13 (2101852): called boinc_finish(0)

</stderr_txt>
]]>

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