Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:19:54 (19234): wrapper (7.7.26015): starting
08:19:54 (19234): wrapper: running run_atlas (--nthreads 8)
[2025-10-16 08:19:54] Arguments: --nthreads 8
[2025-10-16 08:19:54] Threads: 8
[2025-10-16 08:19:54] Checking for CVMFS
[2025-10-16 08:19:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-16 08:19:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-16 08:19:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-16 08:19:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-16 08:19:57] 2.11.2.0 24289 225794 139800 151762 3 60 21454377 25165824 4632 130560 0 122042005 99.888 60537830 3139 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-16 08:19:57] CVMFS is ok
[2025-10-16 08:19:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-16 08:19:57] Checking for apptainer binary...
[2025-10-16 08:19:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-16 08:19:57] Running /usr/bin/apptainer --version
[2025-10-16 08:19:57] apptainer version 1.3.2-1.el7
[2025-10-16 08:19:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-16 08:20:16] cg-vwn388.simple-grid.lan
[2025-10-16 08:20:16] apptainer works
[2025-10-16 08:20:16] Set ATHENA_PROC_NUMBER=8
[2025-10-16 08:20:16] Set ATHENA_CORE_NUMBER=8
[2025-10-16 08:20:16] Starting ATLAS job with PandaID=6845686894
[2025-10-16 08:20:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-16 12:40:35]  *** The last 200 lines of the pilot log: ***
[2025-10-16 12:40:35] 2025-10-16 10:39:55,266 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-16 12:40:35] 2025-10-16 10:39:55,273 | INFO     | fitting pss+swap vs Time
[2025-10-16 12:40:35] 2025-10-16 10:39:55,274 | INFO     | sum of square deviations: 4449281562.0
[2025-10-16 12:40:35] 2025-10-16 10:39:55,276 | INFO     | sum of deviations: 38488993039.000015
[2025-10-16 12:40:35] 2025-10-16 10:39:55,276 | INFO     | mean x: 1760603676.0
[2025-10-16 12:40:35] 2025-10-16 10:39:55,276 | INFO     | mean y: 2473000.83127572
[2025-10-16 12:40:35] 2025-10-16 10:39:55,276 | INFO     | -- intersect: -15227820179.252668
[2025-10-16 12:40:35] 2025-10-16 10:39:55,276 | INFO     | intersect: -15227820179.252668
[2025-10-16 12:40:35] 2025-10-16 10:39:55,277 | INFO     | chi2: 5.822726114236888
[2025-10-16 12:40:35] 2025-10-16 10:39:55,277 | INFO     | sum of square deviations: 4180243959.5
[2025-10-16 12:40:35] 2025-10-16 10:39:55,279 | INFO     | sum of deviations: 53641790027.00006
[2025-10-16 12:40:35] 2025-10-16 10:39:55,279 | INFO     | mean x: 1760603523.5
[2025-10-16 12:40:35] 2025-10-16 10:39:55,280 | INFO     | mean y: 2481437.6974789915
[2025-10-16 12:40:35] 2025-10-16 10:39:55,280 | INFO     | -- intersect: -22589961836.7567
[2025-10-16 12:40:35] 2025-10-16 10:39:55,280 | INFO     | intersect: -22589961836.7567
[2025-10-16 12:40:35] 2025-10-16 10:39:55,280 | INFO     | chi2: 5.10155111208447
[2025-10-16 12:40:35] 2025-10-16 10:39:55,280 | INFO     | current chi2=5.10155111208447 (change=12.385521626873444 %)
[2025-10-16 12:40:35] 2025-10-16 10:39:55,280 | INFO     | right removable region: 237
[2025-10-16 12:40:35] 2025-10-16 10:39:55,281 | INFO     | sum of square deviations: 4180243959.5
[2025-10-16 12:40:35] 2025-10-16 10:39:55,283 | INFO     | sum of deviations: -41508660331.5
[2025-10-16 12:40:35] 2025-10-16 10:39:55,289 | INFO     | mean x: 1760603828.5
[2025-10-16 12:40:35] 2025-10-16 10:39:55,289 | INFO     | mean y: 2518285.256302521
[2025-10-16 12:40:35] 2025-10-16 10:39:55,289 | INFO     | -- intersect: 17484824821.328934
[2025-10-16 12:40:35] 2025-10-16 10:39:55,289 | INFO     | intersect: 17484824821.328934
[2025-10-16 12:40:35] 2025-10-16 10:39:55,290 | INFO     | chi2: 1.6046202295381895
[2025-10-16 12:40:35] 2025-10-16 10:39:55,290 | INFO     | current chi2=1.6046202295381895 (change=72.44211391611218 %)
[2025-10-16 12:40:35] 2025-10-16 10:39:55,290 | INFO     | sum of square deviations: 3922276332.0
[2025-10-16 12:40:35] 2025-10-16 10:39:55,292 | INFO     | sum of deviations: -65061748378.99999
[2025-10-16 12:40:35] 2025-10-16 10:39:55,292 | INFO     | mean x: 1760603981.0
[2025-10-16 12:40:35] 2025-10-16 10:39:55,293 | INFO     | mean y: 2532085.540772532
[2025-10-16 12:40:35] 2025-10-16 10:39:55,293 | INFO     | -- intersect: 29206994879.848473
[2025-10-16 12:40:35] 2025-10-16 10:39:55,293 | INFO     | intersect: 29206994879.848473
[2025-10-16 12:40:35] 2025-10-16 10:39:55,293 | INFO     | chi2: 1.0021089903751519
[2025-10-16 12:40:35] 2025-10-16 10:39:55,293 | INFO     | current chi2=1.0021089903751519 (change=37.54852569298846 %)
[2025-10-16 12:40:35] 2025-10-16 10:39:55,294 | INFO     | sum of square deviations: 3675146117.0
[2025-10-16 12:40:35] 2025-10-16 10:39:55,295 | INFO     | sum of deviations: -58468438023.99999
[2025-10-16 12:40:35] 2025-10-16 10:39:55,296 | INFO     | mean x: 1760604133.5
[2025-10-16 12:40:35] 2025-10-16 10:39:55,296 | INFO     | mean y: 2528011.6403508773
[2025-10-16 12:40:35] 2025-10-16 10:39:55,296 | INFO     | -- intersect: 28012237119.035538
[2025-10-16 12:40:35] 2025-10-16 10:39:55,296 | INFO     | intersect: 28012237119.035538
[2025-10-16 12:40:35] 2025-10-16 10:39:55,296 | INFO     | chi2: 0.9962742045222632
[2025-10-16 12:40:35] 2025-10-16 10:39:55,296 | INFO     | current chi2=0.9962742045222632 (change=0.5822506243262355 %)
[2025-10-16 12:40:35] 2025-10-16 10:39:55,296 | INFO     | left removable region: 30
[2025-10-16 12:40:35] 2025-10-16 10:39:55,297 | INFO     | sum of square deviations: 2750295288.0
[2025-10-16 12:40:35] 2025-10-16 10:39:55,298 | INFO     | sum of deviations: -18541019783.999996
[2025-10-16 12:40:35] 2025-10-16 10:39:55,299 | INFO     | mean x: 1760604408.0
[2025-10-16 12:40:35] 2025-10-16 10:39:55,299 | INFO     | mean y: 2521482.1545893718
[2025-10-16 12:40:35] 2025-10-16 10:39:55,299 | INFO     | -- intersect: 11871574708.167898
[2025-10-16 12:40:35] 2025-10-16 10:39:55,299 | INFO     | intersect: 11871574708.167898
[2025-10-16 12:40:35] 2025-10-16 10:39:55,299 | INFO     | chi2: 0.14006866653134672
[2025-10-16 12:40:35] 2025-10-16 10:39:55,299 | INFO     | -- intersect: 11871574708.167898
[2025-10-16 12:40:35] 2025-10-16 10:39:55,299 | INFO     | current memory leak: -6.74 B/s (using 207 data points, chi2=0.14)
[2025-10-16 12:40:35] 2025-10-16 10:39:55,300 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-16 12:40:35] 2025-10-16 10:39:55,300 | INFO     | ..............................
[2025-10-16 12:40:35] 2025-10-16 10:39:55,300 | INFO     | . Timing measurements:
[2025-10-16 12:40:35] 2025-10-16 10:39:55,300 | INFO     | . get job = 0 s
[2025-10-16 12:40:35] 2025-10-16 10:39:55,301 | INFO     | . initial setup = 19 s
[2025-10-16 12:40:35] 2025-10-16 10:39:55,301 | INFO     | . payload setup = 128 s
[2025-10-16 12:40:35] 2025-10-16 10:39:55,301 | INFO     | . stage-in = 0 s
[2025-10-16 12:40:35] 2025-10-16 10:39:55,308 | INFO     | . payload execution = 14935 s
[2025-10-16 12:40:35] 2025-10-16 10:39:55,308 | INFO     | . stage-out = 3 s
[2025-10-16 12:40:35] 2025-10-16 10:39:55,308 | INFO     | . log creation = 1 s
[2025-10-16 12:40:35] 2025-10-16 10:39:55,308 | INFO     | ..............................
[2025-10-16 12:40:35] 2025-10-16 10:39:55,461 | INFO     | 
[2025-10-16 12:40:35] 2025-10-16 10:39:55,461 | INFO     | job summary report
[2025-10-16 12:40:35] 2025-10-16 10:39:55,461 | INFO     | --------------------------------------------------
[2025-10-16 12:40:35] 2025-10-16 10:39:55,461 | INFO     | PanDA job id: 6845686894
[2025-10-16 12:40:35] 2025-10-16 10:39:55,461 | INFO     | task id: 46776533
[2025-10-16 12:40:35] 2025-10-16 10:39:55,462 | INFO     | errors: (none)
[2025-10-16 12:40:35] 2025-10-16 10:39:55,462 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-16 12:40:35] 2025-10-16 10:39:55,462 | INFO     | pilot state: finished 
[2025-10-16 12:40:35] 2025-10-16 10:39:55,462 | INFO     | transexitcode: 0
[2025-10-16 12:40:35] 2025-10-16 10:39:55,462 | INFO     | exeerrorcode: 0
[2025-10-16 12:40:35] 2025-10-16 10:39:55,462 | INFO     | exeerrordiag: 
[2025-10-16 12:40:35] 2025-10-16 10:39:55,462 | INFO     | exitcode: 0
[2025-10-16 12:40:35] 2025-10-16 10:39:55,462 | INFO     | exitmsg: OK
[2025-10-16 12:40:35] 2025-10-16 10:39:55,462 | INFO     | cpuconsumptiontime: 54596 s
[2025-10-16 12:40:35] 2025-10-16 10:39:55,462 | INFO     | nevents: 400
[2025-10-16 12:40:35] 2025-10-16 10:39:55,462 | INFO     | neventsw: 0
[2025-10-16 12:40:35] 2025-10-16 10:39:55,462 | INFO     | pid: 29560
[2025-10-16 12:40:35] 2025-10-16 10:39:55,462 | INFO     | pgrp: 29560
[2025-10-16 12:40:35] 2025-10-16 10:39:55,462 | INFO     | corecount: 8
[2025-10-16 12:40:35] 2025-10-16 10:39:55,463 | INFO     | event service: False
[2025-10-16 12:40:35] 2025-10-16 10:39:55,463 | INFO     | sizes: {0: 2348702, 1: 2348957, 12: 2348957, 23: 2348985, 33: 2349013, 44: 2349069, 55: 2349225, 65: 2349253, 76: 2349281, 85: 2349599, 87: 2349627, 15067: 2380236
[2025-10-16 12:40:35] 2025-10-16 10:39:55,463 | INFO     | --------------------------------------------------
[2025-10-16 12:40:35] 2025-10-16 10:39:55,463 | INFO     | 
[2025-10-16 12:40:35] 2025-10-16 10:39:55,463 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-10-16 12:40:35] 2025-10-16 10:39:55,927 | INFO     | time since job start (15356s) is within the limit (172800.0s)
[2025-10-16 12:40:35] 2025-10-16 10:39:56,000 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-16 12:40:35] 2025-10-16 10:39:56,001 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-16 12:40:35] 2025-10-16 10:39:56,001 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-16 12:40:35] 2025-10-16 10:39:56,001 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-16 12:40:35] 2025-10-16 10:39:56,001 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-16 12:40:35] 2025-10-16 10:39:56,001 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-16 12:40:35] 2025-10-16 10:39:56,001 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-16 12:40:35] 2025-10-16 10:39:56,001 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-16 12:40:35] 2025-10-16 10:39:56,001 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-16 12:40:35] 2025-10-16 10:39:56,001 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-16 12:40:35] 2025-10-16 10:39:56,001 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-16 12:40:35] 2025-10-16 10:39:56,001 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-16 12:40:35] 2025-10-16 10:39:56,001 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-16 12:40:35] 2025-10-16 10:39:56,001 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-16 12:40:35] 2025-10-16 10:39:56,002 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-16 12:40:35] 2025-10-16 10:39:56,002 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-16 12:40:35] 2025-10-16 10:39:56,002 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-16 12:40:35] 2025-10-16 10:39:56,002 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-16 12:40:35] 2025-10-16 10:39:56,002 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-16 12:40:35] 2025-10-16 10:39:56,002 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-16 12:40:35] 2025-10-16 10:39:56,002 | INFO     | job 6845686894 has completed (purged errors)
[2025-10-16 12:40:35] 2025-10-16 10:39:56,002 | INFO     | overall cleanup function is called
[2025-10-16 12:40:35] 2025-10-16 10:39:57,011 | INFO     | --- collectZombieJob: --- 10, [29560]
[2025-10-16 12:40:35] 2025-10-16 10:39:57,011 | INFO     | zombie collector waiting for pid 29560
[2025-10-16 12:40:35] 2025-10-16 10:39:57,011 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-16 12:40:35] 2025-10-16 10:39:57,011 | INFO     | collected zombie processes
[2025-10-16 12:40:35] 2025-10-16 10:39:57,011 | INFO     | will attempt to kill all subprocesses of pid=29560
[2025-10-16 12:40:35] 2025-10-16 10:39:57,119 | INFO     | process IDs to be killed: [29560] (in reverse order)
[2025-10-16 12:40:35] 2025-10-16 10:39:57,737 | WARNING  | found no corresponding commands to process id(s)
[2025-10-16 12:40:35] 2025-10-16 10:39:57,737 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-16 12:40:35] 2025-10-16 10:39:57,741 | INFO     | did not find any defunct processes belonging to 29560
[2025-10-16 12:40:35] 2025-10-16 10:39:57,743 | INFO     | did not find any defunct processes belonging to 29560
[2025-10-16 12:40:35] 2025-10-16 10:39:57,744 | INFO     | ready for new job
[2025-10-16 12:40:35] 2025-10-16 10:39:57,744 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-16 12:40:35] 2025-10-16 10:39:57,746 | INFO     | ***************************************
[2025-10-16 12:40:35] 2025-10-16 10:39:57,746 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-16 12:40:35] 2025-10-16 10:39:57,746 | INFO     | ***************************************
[2025-10-16 12:40:35] 2025-10-16 10:39:57,746 | INFO     | 
[2025-10-16 12:40:35] 2025-10-16 10:39:57,747 | INFO     | pilot is running in a VM
[2025-10-16 12:40:35] 2025-10-16 10:39:57,747 | INFO     | architecture information:
[2025-10-16 12:40:35] 2025-10-16 10:39:57,762 | INFO     | executing command: cat /etc/os-release
[2025-10-16 12:40:35] 2025-10-16 10:39:57,944 | INFO     | cat /etc/os-release:
[2025-10-16 12:40:35] NAME="CentOS Linux"
[2025-10-16 12:40:35] VERSION="7 (Core)"
[2025-10-16 12:40:35] ID="centos"
[2025-10-16 12:40:35] ID_LIKE="rhel fedora"
[2025-10-16 12:40:35] VERSION_ID="7"
[2025-10-16 12:40:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-16 12:40:35] ANSI_COLOR="0;31"
[2025-10-16 12:40:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-16 12:40:35] HOME_URL="https://www.centos.org/"
[2025-10-16 12:40:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-16 12:40:35] 
[2025-10-16 12:40:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-16 12:40:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-16 12:40:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-16 12:40:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-16 12:40:35] 
[2025-10-16 12:40:35] 2025-10-16 10:39:57,945 | INFO     | ***************************************
[2025-10-16 12:40:35] 2025-10-16 10:39:58,448 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-10-16 12:40:35] 2025-10-16 10:39:58,553 | INFO     | sufficient remaining disk space (495821258752 B)
[2025-10-16 12:40:35] 2025-10-16 10:39:58,554 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-16 12:40:35] 2025-10-16 10:39:58,554 | INFO     | current server update state: UPDATING_FINAL
[2025-10-16 12:40:35] 2025-10-16 10:39:58,554 | INFO     | update_server=False
[2025-10-16 12:40:35] 2025-10-16 10:39:58,554 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-16 12:40:35] 2025-10-16 10:39:58,554 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-16 12:40:35] 2025-10-16 10:39:58,657 | INFO     | all payload control threads have been joined
[2025-10-16 12:40:35] 2025-10-16 10:39:58,794 | INFO     | all job control threads have been joined
[2025-10-16 12:40:35] 2025-10-16 10:39:59,281 | INFO     | all data control threads have been joined
[2025-10-16 12:40:35] 2025-10-16 10:39:59,345 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-16 12:40:35] 2025-10-16 10:39:59,345 | INFO     | aborting loop
[2025-10-16 12:40:35] 2025-10-16 10:39:59,560 | INFO     | [job] retrieve thread has finished
[2025-10-16 12:40:35] 2025-10-16 10:39:59,592 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-16 12:40:35] 2025-10-16 10:39:59,663 | INFO     | [payload] control thread has finished
[2025-10-16 12:40:35] 2025-10-16 10:39:59,800 | INFO     | [job] control thread has finished
[2025-10-16 12:40:35] 2025-10-16 10:39:59,876 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-16 12:40:35] 2025-10-16 10:39:59,905 | INFO     | [payload] validate_post thread has finished
[2025-10-16 12:40:35] 2025-10-16 10:40:00,013 | INFO     | [payload] execute_payloads thread has finished
[2025-10-16 12:40:35] 2025-10-16 10:40:00,065 | INFO     | [data] copytool_in thread has finished
[2025-10-16 12:40:35] 2025-10-16 10:40:00,067 | INFO     | [payload] failed_post thread has finished
[2025-10-16 12:40:35] 2025-10-16 10:40:00,235 | INFO     | [job] create_data_payload thread has finished
[2025-10-16 12:40:35] 2025-10-16 10:40:00,287 | INFO     | [data] control thread has finished
[2025-10-16 12:40:35] 2025-10-16 10:40:00,351 | INFO     | [job] job monitor thread has finished
[2025-10-16 12:40:35] 2025-10-16 10:40:00,478 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-16 12:40:35] 2025-10-16 10:40:00,509 | INFO     | [job] validate thread has finished
[2025-10-16 12:40:35] 2025-10-16 10:40:00,562 | INFO     | [data] copytool_out thread has finished
[2025-10-16 12:40:35] 2025-10-16 10:40:00,988 | INFO     | [payload] validate_pre thread has finished
[2025-10-16 12:40:35] 2025-10-16 10:40:01,484 | INFO     | [job] queue monitor thread has finished
[2025-10-16 12:40:35] 2025-10-16 10:40:03,885 | INFO     | [data] queue_monitor thread has finished
[2025-10-16 12:40:35] 2025-10-16 10:40:24,461 | INFO     | [monitor] cgroup control has ended
[2025-10-16 12:40:35] 2025-10-16 10:40:25,632 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139724693370688)>', '<ExcThread(monitor, started 139724236760832)>']
[2025-10-16 12:40:35] 2025-10-16 10:40:29,109 | INFO     | PID=23000 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-16 12:40:35] 2025-10-16 10:40:29,110 | INFO     | .. there are 9 such processes running
[2025-10-16 12:40:35] 2025-10-16 10:40:29,110 | INFO     | found 0 job(s) in 20 queues
[2025-10-16 12:40:35] 2025-10-16 10:40:29,110 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-16 12:40:35] 2025-10-16 10:40:29,110 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-16 12:40:35] 2025-10-16 10:40:29,110 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-16 12:40:35] 2025-10-16 10:40:29,110 | INFO     | [monitor] control thread has ended
[2025-10-16 12:40:35] 2025-10-16 10:40:30,658 | INFO     | all workflow threads have been joined
[2025-10-16 12:40:35] 2025-10-16 10:40:30,658 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-16 12:40:35] 2025-10-16 10:40:30,658 | INFO     | traces error code: 0
[2025-10-16 12:40:35] 2025-10-16 10:40:30,659 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-16 12:40:35] 2025-10-16 10:40:31,072 [wrapper] ==== pilot stdout END ====
[2025-10-16 12:40:35] 2025-10-16 10:40:31,128 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-16 12:40:35] 2025-10-16 10:40:31,256 [wrapper] pilotpid: 23000
[2025-10-16 12:40:35] 2025-10-16 10:40:31,357 [wrapper] Pilot exit status: 0
[2025-10-16 12:40:35] 2025-10-16 10:40:31,884 [wrapper] pandaids: 6845686894
[2025-10-16 12:40:35] 2025-10-16 10:40:32,502 [wrapper] cleanup supervisor_pilot 24453 23001
[2025-10-16 12:40:35] 2025-10-16 10:40:32,561 [wrapper] Test setup, not cleaning
[2025-10-16 12:40:35] 2025-10-16 10:40:32,656 [wrapper] apfmon messages muted
[2025-10-16 12:40:35] 2025-10-16 10:40:32,756 [wrapper] ==== wrapper stdout END ====
[2025-10-16 12:40:35] 2025-10-16 10:40:32,846 [wrapper] ==== wrapper stderr END ====
[2025-10-16 12:40:35]  *** Error codes and diagnostics ***
[2025-10-16 12:40:35]     "exeErrorCode": 0,
[2025-10-16 12:40:35]     "exeErrorDiag": "",
[2025-10-16 12:40:35]     "pilotErrorCode": 0,
[2025-10-16 12:40:35]     "pilotErrorDiag": "",
[2025-10-16 12:40:35]  *** Listing of results directory ***
[2025-10-16 12:40:35] total 431004
[2025-10-16 12:40:35] -rw-r--r--. 1 boinc boinc    557409 Oct 15 11:36 pilot3.tar.gz
[2025-10-16 12:40:35] -rw-r--r--. 1 boinc boinc      5112 Oct 15 11:40 queuedata.json
[2025-10-16 12:40:35] -rwx------. 1 boinc boinc     36292 Oct 15 11:40 runpilot2-wrapper.sh
[2025-10-16 12:40:35] -rw-r--r--. 1 boinc boinc       100 Oct 16 08:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-16 12:40:35] -rwxr-xr-x. 1 boinc boinc      7986 Oct 16 08:19 run_atlas
[2025-10-16 12:40:35] -rw-r--r--. 1 boinc boinc       105 Oct 16 08:19 job.xml
[2025-10-16 12:40:35] -rw-r--r--. 1 boinc boinc      6390 Oct 16 08:19 init_data.xml
[2025-10-16 12:40:35] -rw-r--r--. 2 boinc boinc 228453654 Oct 16 08:19 EVNT.46776529._000165.pool.root.1
[2025-10-16 12:40:35] -rw-r--r--. 2 boinc boinc     15120 Oct 16 08:19 start_atlas.sh
[2025-10-16 12:40:35] drwxrwx--x. 2 boinc boinc        68 Oct 16 08:19 shared
[2025-10-16 12:40:35] -rw-r--r--. 2 boinc boinc    569688 Oct 16 08:19 input.tar.gz
[2025-10-16 12:40:35] -rw-r--r--. 1 boinc boinc         0 Oct 16 08:19 boinc_lockfile
[2025-10-16 12:40:35] -rw-r--r--. 1 boinc boinc      2561 Oct 16 08:20 pandaJob.out
[2025-10-16 12:40:35] -rw-------. 1 boinc boinc    973556 Oct 16 08:23 agis_schedconf.cvmfs.json
[2025-10-16 12:40:35] drwx------. 5 boinc boinc      4096 Oct 16 08:23 pilot3
[2025-10-16 12:40:35] -rw-------. 1 boinc boinc 203949775 Oct 16 12:36 HITS.46776533._002760.pool.root.1
[2025-10-16 12:40:35] -rw-r--r--. 1 boinc boinc       531 Oct 16 12:37 boinc_task_state.xml
[2025-10-16 12:40:35] -rw-------. 1 boinc boinc      1019 Oct 16 12:38 memory_monitor_summary.json
[2025-10-16 12:40:35] -rw-------. 1 boinc boinc   1560740 Oct 16 12:38 agis_ddmendpoints.agis.ALL.json
[2025-10-16 12:40:35] -rw-------. 1 boinc boinc    466709 Oct 16 12:38 log.46776533._002760.job.log.tgz.1
[2025-10-16 12:40:35] -rw-------. 1 boinc boinc        95 Oct 16 12:39 pilot_heartbeat.json
[2025-10-16 12:40:35] -rw-------. 1 boinc boinc      7782 Oct 16 12:39 heartbeat.json
[2025-10-16 12:40:35] -rw-r--r--. 1 boinc boinc        28 Oct 16 12:40 wrapper_checkpoint.txt
[2025-10-16 12:40:35] -rw-r--r--. 1 boinc boinc      8192 Oct 16 12:40 boinc_mmap_file
[2025-10-16 12:40:35] -rw-------. 1 boinc boinc      4884 Oct 16 12:40 pilotlog.txt
[2025-10-16 12:40:35] -rw-------. 1 boinc boinc   2062274 Oct 16 12:40 log.46776533._002760.job.log.1
[2025-10-16 12:40:35] -rw-------. 1 boinc boinc       357 Oct 16 12:40 output.list
[2025-10-16 12:40:35] -rw-r--r--. 1 boinc boinc       620 Oct 16 12:40 runtime_log
[2025-10-16 12:40:35] -rw-------. 1 boinc boinc   2549760 Oct 16 12:40 result.tar.gz
[2025-10-16 12:40:35] -rw-r--r--. 1 boinc boinc      8703 Oct 16 12:40 runtime_log.err
[2025-10-16 12:40:35] -rw-------. 1 boinc boinc       657 Oct 16 12:40 8LGLDm2ADT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGFnNDmd0YkGn.diag
[2025-10-16 12:40:35] -rw-r--r--. 1 boinc boinc     20638 Oct 16 12:40 stderr.txt
[2025-10-16 12:40:35] HITS file was successfully produced:
[2025-10-16 12:40:35] -rw-------. 1 boinc boinc 203949775 Oct 16 12:36 shared/HITS.pool.root.1
[2025-10-16 12:40:35]  *** Contents of shared directory: ***
[2025-10-16 12:40:35] total 425340
[2025-10-16 12:40:35] -rw-r--r--. 2 boinc boinc 228453654 Oct 16 08:19 ATLAS.root_0
[2025-10-16 12:40:35] -rw-r--r--. 2 boinc boinc     15120 Oct 16 08:19 start_atlas.sh
[2025-10-16 12:40:35] -rw-r--r--. 2 boinc boinc    569688 Oct 16 08:19 input.tar.gz
[2025-10-16 12:40:35] -rw-------. 1 boinc boinc 203949775 Oct 16 12:36 HITS.pool.root.1
[2025-10-16 12:40:35] -rw-------. 1 boinc boinc   2549760 Oct 16 12:40 result.tar.gz
12:40:36 (19234): run_atlas exited; CPU time 54791.419379
12:40:36 (19234): called boinc_finish(0)

</stderr_txt>
]]>

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