Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:45:32 (2108727): wrapper (7.7.26015): starting
04:45:32 (2108727): wrapper: running run_atlas (--nthreads 8)
[2025-10-15 04:45:32] Arguments: --nthreads 8
[2025-10-15 04:45:32] Threads: 8
[2025-10-15 04:45:32] Checking for CVMFS
[2025-10-15 04:45:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-15 04:45:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-15 04:45:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-15 04:45:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-15 04:45:35] 2.13.2.0 403710 15359 222088 151727 3 620 22421153 32935936 18552 16776704 0 40714605 99.653 35770004 28713 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-15 04:45:35] CVMFS is ok
[2025-10-15 04:45:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-15 04:45:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-15 04:45:35] Further information can be found at the LHC@home message board.
[2025-10-15 04:45:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-15 04:45:35] Checking for apptainer binary...
[2025-10-15 04:45:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-15 04:45:35] Running /usr/bin/apptainer --version
[2025-10-15 04:45:35] apptainer version 1.4.3-1.el9
[2025-10-15 04:45:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-15 04:45:36] c-4-40.aglt2.org
[2025-10-15 04:45:36] apptainer works
[2025-10-15 04:45:36] Set ATHENA_PROC_NUMBER=8
[2025-10-15 04:45:36] Set ATHENA_CORE_NUMBER=8
[2025-10-15 04:45:36] Starting ATLAS job with PandaID=6845526774
[2025-10-15 04:45:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
08:40:03 (2108727): BOINC client no longer exists - exiting
08:40:03 (2108727): timer handler: client dead, exiting
08:48:45 (3831472): wrapper (7.7.26015): starting
08:48:45 (3831472): wrapper: running run_atlas (--nthreads 8)
[2025-10-15 08:48:45] Arguments: --nthreads 8
[2025-10-15 08:48:45] Threads: 8
[2025-10-15 08:48:45] This job has been restarted, cleaning up previous attempt
[2025-10-15 08:48:45] Checking for CVMFS
[2025-10-15 08:48:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-15 08:48:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-15 08:48:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-15 08:48:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-15 08:48:45] 2.13.2.0 403710 15602 209488 151734 0 224 25788569 32935936 17809 16776704 0 43459370 99.666 36689950 28769 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-15 08:48:45] CVMFS is ok
[2025-10-15 08:48:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-15 08:48:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-15 08:48:45] Further information can be found at the LHC@home message board.
[2025-10-15 08:48:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-15 08:48:45] Checking for apptainer binary...
[2025-10-15 08:48:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-15 08:48:45] Running /usr/bin/apptainer --version
[2025-10-15 08:48:45] apptainer version 1.4.3-1.el9
[2025-10-15 08:48:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-15 08:48:46] c-4-40.aglt2.org
[2025-10-15 08:48:46] apptainer works
[2025-10-15 08:48:46] Set ATHENA_PROC_NUMBER=8
[2025-10-15 08:48:46] Set ATHENA_CORE_NUMBER=8
[2025-10-15 08:48:46] Starting ATLAS job with PandaID=6845526774
[2025-10-15 08:48:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-15 12:58:00]  *** The last 200 lines of the pilot log: ***
[2025-10-15 12:58:00] 2025-10-15 16:57:24,547 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-15 12:58:00] 2025-10-15 16:57:24,626 | INFO     | fitting pss+swap vs Time
[2025-10-15 12:58:00] 2025-10-15 16:57:24,650 | INFO     | sum of square deviations: 4504285340.76638
[2025-10-15 12:58:00] 2025-10-15 16:57:24,652 | INFO     | sum of deviations: 4480657460.073767
[2025-10-15 12:58:00] 2025-10-15 16:57:24,652 | INFO     | mean x: 1760539996.840164
[2025-10-15 12:58:00] 2025-10-15 16:57:24,652 | INFO     | mean y: 2100697.155737705
[2025-10-15 12:58:00] 2025-10-15 16:57:24,653 | INFO     | -- intersect: -1749204132.315381
[2025-10-15 12:58:00] 2025-10-15 16:57:24,653 | INFO     | intersect: -1749204132.315381
[2025-10-15 12:58:00] 2025-10-15 16:57:24,653 | INFO     | chi2: 3.2164874267037904
[2025-10-15 12:58:00] 2025-10-15 16:57:24,654 | INFO     | sum of square deviations: 4233016387.8661036
[2025-10-15 12:58:00] 2025-10-15 16:57:24,713 | INFO     | sum of deviations: 31284166094.42262
[2025-10-15 12:58:00] 2025-10-15 16:57:24,713 | INFO     | mean x: 1760539844.3430963
[2025-10-15 12:58:00] 2025-10-15 16:57:24,713 | INFO     | mean y: 2115595.1046025106
[2025-10-15 12:58:00] 2025-10-15 16:57:24,713 | INFO     | -- intersect: -13009178446.694067
[2025-10-15 12:58:00] 2025-10-15 16:57:24,713 | INFO     | intersect: -13009178446.694067
[2025-10-15 12:58:00] 2025-10-15 16:57:24,714 | INFO     | chi2: 1.8930050542552233
[2025-10-15 12:58:00] 2025-10-15 16:57:24,714 | INFO     | current chi2=1.8930050542552233 (change=41.146822507708436 %)
[2025-10-15 12:58:00] 2025-10-15 16:57:24,714 | INFO     | sum of square deviations: 3972835127.829052
[2025-10-15 12:58:00] 2025-10-15 16:57:24,828 | INFO     | sum of deviations: 31753492883.41028
[2025-10-15 12:58:00] 2025-10-15 16:57:24,828 | INFO     | mean x: 1760539691.837607
[2025-10-15 12:58:00] 2025-10-15 16:57:24,828 | INFO     | mean y: 2115866.5897435895
[2025-10-15 12:58:00] 2025-10-15 16:57:24,828 | INFO     | -- intersect: -14069267107.280361
[2025-10-15 12:58:00] 2025-10-15 16:57:24,828 | INFO     | intersect: -14069267107.280361
[2025-10-15 12:58:00] 2025-10-15 16:57:24,829 | INFO     | chi2: 1.8874150987161464
[2025-10-15 12:58:00] 2025-10-15 16:57:24,829 | INFO     | current chi2=1.8874150987161464 (change=0.29529533090845916 %)
[2025-10-15 12:58:00] 2025-10-15 16:57:24,829 | INFO     | right removable region: 233
[2025-10-15 12:58:00] 2025-10-15 16:57:24,830 | INFO     | sum of square deviations: 4232980520.175728
[2025-10-15 12:58:00] 2025-10-15 16:57:24,937 | INFO     | sum of deviations: -31640355992.322174
[2025-10-15 12:58:00] 2025-10-15 16:57:24,937 | INFO     | mean x: 1760540149.3472803
[2025-10-15 12:58:00] 2025-10-15 16:57:24,937 | INFO     | mean y: 2120856.1966527198
[2025-10-15 12:58:00] 2025-10-15 16:57:24,938 | INFO     | -- intersect: 13161670445.102272
[2025-10-15 12:58:00] 2025-10-15 16:57:24,938 | INFO     | intersect: 13161670445.102272
[2025-10-15 12:58:00] 2025-10-15 16:57:24,938 | INFO     | chi2: 1.6478283380517684
[2025-10-15 12:58:00] 2025-10-15 16:57:24,938 | INFO     | current chi2=1.6478283380517684 (change=48.769321329496414 %)
[2025-10-15 12:58:00] 2025-10-15 16:57:24,939 | INFO     | sum of square deviations: 3972820978.4615574
[2025-10-15 12:58:00] 2025-10-15 16:57:24,940 | INFO     | sum of deviations: -34098941752.230762
[2025-10-15 12:58:00] 2025-10-15 16:57:24,940 | INFO     | mean x: 1760540301.8461537
[2025-10-15 12:58:00] 2025-10-15 16:57:24,941 | INFO     | mean y: 2122259.8547008545
[2025-10-15 12:58:00] 2025-10-15 16:57:24,941 | INFO     | -- intersect: 15112936849.93318
[2025-10-15 12:58:00] 2025-10-15 16:57:24,941 | INFO     | intersect: 15112936849.93318
[2025-10-15 12:58:00] 2025-10-15 16:57:24,941 | INFO     | chi2: 1.607083434586825
[2025-10-15 12:58:00] 2025-10-15 16:57:24,941 | INFO     | current chi2=1.607083434586825 (change=2.4726424788346715 %)
[2025-10-15 12:58:00] 2025-10-15 16:57:24,941 | INFO     | left removable region: 20
[2025-10-15 12:58:00] 2025-10-15 16:57:24,942 | INFO     | sum of square deviations: 2996313233.3333516
[2025-10-15 12:58:00] 2025-10-15 16:57:24,943 | INFO     | sum of deviations: 5006218107.333337
[2025-10-15 12:58:00] 2025-10-15 16:57:24,943 | INFO     | mean x: 1760540271.3333333
[2025-10-15 12:58:00] 2025-10-15 16:57:24,943 | INFO     | mean y: 2131237.291079812
[2025-10-15 12:58:00] 2025-10-15 16:57:24,944 | INFO     | -- intersect: -2939366496.3198457
[2025-10-15 12:58:00] 2025-10-15 16:57:24,944 | INFO     | intersect: -2939366496.3198457
[2025-10-15 12:58:00] 2025-10-15 16:57:24,944 | INFO     | chi2: 0.18636840452328116
[2025-10-15 12:58:00] 2025-10-15 16:57:24,944 | INFO     | -- intersect: -2939366496.3198457
[2025-10-15 12:58:00] 2025-10-15 16:57:24,944 | INFO     | current memory leak: 1.67 B/s (using 213 data points, chi2=0.19)
[2025-10-15 12:58:00] 2025-10-15 16:57:24,945 | INFO     | could have reported an average CPU frequency of 2603 MHz (12 samples)
[2025-10-15 12:58:00] 2025-10-15 16:57:24,945 | INFO     | ..............................
[2025-10-15 12:58:00] 2025-10-15 16:57:24,945 | INFO     | . Timing measurements:
[2025-10-15 12:58:00] 2025-10-15 16:57:24,945 | INFO     | . get job = 0 s
[2025-10-15 12:58:00] 2025-10-15 16:57:24,945 | INFO     | . initial setup = 3 s
[2025-10-15 12:58:00] 2025-10-15 16:57:24,945 | INFO     | . payload setup = 8 s
[2025-10-15 12:58:00] 2025-10-15 16:57:24,946 | INFO     | . stage-in = 0 s
[2025-10-15 12:58:00] 2025-10-15 16:57:24,946 | INFO     | . payload execution = 14844 s
[2025-10-15 12:58:00] 2025-10-15 16:57:24,946 | INFO     | . stage-out = 3 s
[2025-10-15 12:58:00] 2025-10-15 16:57:24,946 | INFO     | . log creation = 1 s
[2025-10-15 12:58:00] 2025-10-15 16:57:24,946 | INFO     | ..............................
[2025-10-15 12:58:00] 2025-10-15 16:57:25,582 | INFO     | 
[2025-10-15 12:58:00] 2025-10-15 16:57:25,582 | INFO     | job summary report
[2025-10-15 12:58:00] 2025-10-15 16:57:25,583 | INFO     | --------------------------------------------------
[2025-10-15 12:58:00] 2025-10-15 16:57:25,583 | INFO     | PanDA job id: 6845526774
[2025-10-15 12:58:00] 2025-10-15 16:57:25,583 | INFO     | task id: 46776533
[2025-10-15 12:58:00] 2025-10-15 16:57:25,583 | INFO     | errors: (none)
[2025-10-15 12:58:00] 2025-10-15 16:57:25,583 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-15 12:58:00] 2025-10-15 16:57:25,583 | INFO     | pilot state: finished 
[2025-10-15 12:58:00] 2025-10-15 16:57:25,583 | INFO     | transexitcode: 0
[2025-10-15 12:58:00] 2025-10-15 16:57:25,583 | INFO     | exeerrorcode: 0
[2025-10-15 12:58:00] 2025-10-15 16:57:25,583 | INFO     | exeerrordiag: 
[2025-10-15 12:58:00] 2025-10-15 16:57:25,584 | INFO     | exitcode: 0
[2025-10-15 12:58:00] 2025-10-15 16:57:25,584 | INFO     | exitmsg: OK
[2025-10-15 12:58:00] 2025-10-15 16:57:25,584 | INFO     | cpuconsumptiontime: 53059 s
[2025-10-15 12:58:00] 2025-10-15 16:57:25,584 | INFO     | nevents: 400
[2025-10-15 12:58:00] 2025-10-15 16:57:25,584 | INFO     | neventsw: 0
[2025-10-15 12:58:00] 2025-10-15 16:57:25,584 | INFO     | pid: 3855074
[2025-10-15 12:58:00] 2025-10-15 16:57:25,584 | INFO     | pgrp: 3855074
[2025-10-15 12:58:00] 2025-10-15 16:57:25,584 | INFO     | corecount: 8
[2025-10-15 12:58:00] 2025-10-15 16:57:25,584 | INFO     | event service: False
[2025-10-15 12:58:00] 2025-10-15 16:57:25,584 | INFO     | sizes: {0: 2348756, 1: 2348784, 2: 2348983, 12: 2349245, 13: 2349273, 14857: 2380295, 14861: 2389349, 14879: 2389487}
[2025-10-15 12:58:00] 2025-10-15 16:57:25,585 | INFO     | --------------------------------------------------
[2025-10-15 12:58:00] 2025-10-15 16:57:25,585 | INFO     | 
[2025-10-15 12:58:00] 2025-10-15 16:57:25,585 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-15 12:58:00] 2025-10-15 16:57:25,758 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-15 12:58:00] 2025-10-15 16:57:25,759 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-15 12:58:00] 2025-10-15 16:57:25,759 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-15 12:58:00] 2025-10-15 16:57:25,759 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-15 12:58:00] 2025-10-15 16:57:25,759 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-15 12:58:00] 2025-10-15 16:57:25,759 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-15 12:58:00] 2025-10-15 16:57:25,759 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-15 12:58:00] 2025-10-15 16:57:25,759 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-15 12:58:00] 2025-10-15 16:57:25,759 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-15 12:58:00] 2025-10-15 16:57:25,760 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-15 12:58:00] 2025-10-15 16:57:25,760 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-15 12:58:00] 2025-10-15 16:57:25,760 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-15 12:58:00] 2025-10-15 16:57:25,760 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-15 12:58:00] 2025-10-15 16:57:25,760 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-15 12:58:00] 2025-10-15 16:57:25,760 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-15 12:58:00] 2025-10-15 16:57:25,760 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-15 12:58:00] 2025-10-15 16:57:25,760 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-15 12:58:00] 2025-10-15 16:57:25,760 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-15 12:58:00] 2025-10-15 16:57:25,761 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-15 12:58:00] 2025-10-15 16:57:25,761 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-15 12:58:00] 2025-10-15 16:57:25,761 | INFO     | job 6845526774 has completed (purged errors)
[2025-10-15 12:58:00] 2025-10-15 16:57:25,761 | INFO     | overall cleanup function is called
[2025-10-15 12:58:00] 2025-10-15 16:57:26,851 | INFO     | --- collectZombieJob: --- 10, [3855074]
[2025-10-15 12:58:00] 2025-10-15 16:57:26,851 | INFO     | zombie collector waiting for pid 3855074
[2025-10-15 12:58:00] 2025-10-15 16:57:26,852 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-15 12:58:00] 2025-10-15 16:57:26,852 | INFO     | collected zombie processes
[2025-10-15 12:58:00] 2025-10-15 16:57:26,852 | INFO     | will attempt to kill all subprocesses of pid=3855074
[2025-10-15 12:58:00] 2025-10-15 16:57:27,105 | INFO     | PID=3841738 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-15 12:58:00] 2025-10-15 16:57:27,106 | INFO     | .. there are 33 such processes running
[2025-10-15 12:58:00] 2025-10-15 16:57:27,778 | INFO     | process IDs to be killed: [3855074] (in reverse order)
[2025-10-15 12:58:00] 2025-10-15 16:57:27,986 | WARNING  | found no corresponding commands to process id(s)
[2025-10-15 12:58:00] 2025-10-15 16:57:27,988 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-15 12:58:00] 2025-10-15 16:57:28,004 | INFO     | did not find any defunct processes belonging to 3855074
[2025-10-15 12:58:00] 2025-10-15 16:57:28,019 | INFO     | did not find any defunct processes belonging to 3855074
[2025-10-15 12:58:00] 2025-10-15 16:57:28,020 | INFO     | ready for new job
[2025-10-15 12:58:00] 2025-10-15 16:57:28,020 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-15 12:58:00] 2025-10-15 16:57:28,022 | INFO     | ***************************************
[2025-10-15 12:58:00] 2025-10-15 16:57:28,023 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-15 12:58:00] 2025-10-15 16:57:28,023 | INFO     | ***************************************
[2025-10-15 12:58:00] 2025-10-15 16:57:28,023 | INFO     | 
[2025-10-15 12:58:00] 2025-10-15 16:57:28,042 | INFO     | architecture information:
[2025-10-15 12:58:00] 2025-10-15 16:57:28,048 | INFO     | executing command: cat /etc/os-release
[2025-10-15 12:58:00] 2025-10-15 16:57:28,094 | INFO     | cat /etc/os-release:
[2025-10-15 12:58:00] NAME="CentOS Linux"
[2025-10-15 12:58:00] VERSION="7 (Core)"
[2025-10-15 12:58:00] ID="centos"
[2025-10-15 12:58:00] ID_LIKE="rhel fedora"
[2025-10-15 12:58:00] VERSION_ID="7"
[2025-10-15 12:58:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-15 12:58:00] ANSI_COLOR="0;31"
[2025-10-15 12:58:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-15 12:58:00] HOME_URL="https://www.centos.org/"
[2025-10-15 12:58:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-15 12:58:00] 
[2025-10-15 12:58:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-15 12:58:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-15 12:58:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-15 12:58:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-15 12:58:00] 
[2025-10-15 12:58:00] 2025-10-15 16:57:28,095 | INFO     | ***************************************
[2025-10-15 12:58:00] 2025-10-15 16:57:28,597 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-15 12:58:00] 2025-10-15 16:57:28,752 | INFO     | sufficient remaining disk space (75719770112 B)
[2025-10-15 12:58:00] 2025-10-15 16:57:28,753 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-15 12:58:00] 2025-10-15 16:57:28,753 | INFO     | current server update state: UPDATING_FINAL
[2025-10-15 12:58:00] 2025-10-15 16:57:28,753 | INFO     | update_server=False
[2025-10-15 12:58:00] 2025-10-15 16:57:28,753 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-15 12:58:00] 2025-10-15 16:57:29,239 | INFO     | all data control threads have been joined
[2025-10-15 12:58:00] 2025-10-15 16:57:29,483 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-15 12:58:00] 2025-10-15 16:57:29,483 | INFO     | aborting loop
[2025-10-15 12:58:00] 2025-10-15 16:57:29,759 | INFO     | [job] retrieve thread has finished
[2025-10-15 12:58:00] 2025-10-15 16:57:29,967 | INFO     | [payload] execute_payloads thread has finished
[2025-10-15 12:58:00] 2025-10-15 16:57:30,031 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-15 12:58:00] 2025-10-15 16:57:30,038 | INFO     | [payload] validate_pre thread has finished
[2025-10-15 12:58:00] 2025-10-15 16:57:30,045 | INFO     | [job] validate thread has finished
[2025-10-15 12:58:00] 2025-10-15 16:57:30,147 | INFO     | [job] create_data_payload thread has finished
[2025-10-15 12:58:00] 2025-10-15 16:57:30,171 | INFO     | [payload] validate_post thread has finished
[2025-10-15 12:58:00] 2025-10-15 16:57:30,236 | INFO     | all payload control threads have been joined
[2025-10-15 12:58:00] 2025-10-15 16:57:30,245 | INFO     | [data] control thread has finished
[2025-10-15 12:58:00] 2025-10-15 16:57:30,388 | INFO     | all job control threads have been joined
[2025-10-15 12:58:00] 2025-10-15 16:57:30,489 | INFO     | [job] job monitor thread has finished
[2025-10-15 12:58:00] 2025-10-15 16:57:30,539 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-15 12:58:00] 2025-10-15 16:57:30,731 | INFO     | [data] copytool_in thread has finished
[2025-10-15 12:58:00] 2025-10-15 16:57:30,920 | INFO     | [payload] failed_post thread has finished
[2025-10-15 12:58:00] 2025-10-15 16:57:31,050 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-15 12:58:00] 2025-10-15 16:57:31,241 | INFO     | [payload] control thread has finished
[2025-10-15 12:58:00] 2025-10-15 16:57:31,394 | INFO     | [job] control thread has finished
[2025-10-15 12:58:00] 2025-10-15 16:57:31,553 | INFO     | [job] queue monitor thread has finished
[2025-10-15 12:58:00] 2025-10-15 16:57:31,724 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-15 12:58:00] 2025-10-15 16:57:32,041 | INFO     | [data] copytool_out thread has finished
[2025-10-15 12:58:00] 2025-10-15 16:57:33,317 | INFO     | [monitor] cgroup control has ended
[2025-10-15 12:58:00] 2025-10-15 16:57:35,738 | INFO     | [data] queue_monitor thread has finished
[2025-10-15 12:58:00] 2025-10-15 16:57:36,415 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140238578132800)>', '<ExcThread(monitor, started 140237854467840)>']
[2025-10-15 12:58:00] 2025-10-15 16:57:41,441 | INFO     | all workflow threads have been joined
[2025-10-15 12:58:00] 2025-10-15 16:57:41,441 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-15 12:58:00] 2025-10-15 16:57:41,441 | INFO     | traces error code: 0
[2025-10-15 12:58:00] 2025-10-15 16:57:41,442 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-15 12:58:00] 2025-10-15 16:57:59,830 | INFO     | PID=3841738 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-15 12:58:00] 2025-10-15 16:57:59,831 | INFO     | .. there are 33 such processes running
[2025-10-15 12:58:00] 2025-10-15 16:57:59,831 | INFO     | found 0 job(s) in 20 queues
[2025-10-15 12:58:00] 2025-10-15 16:57:59,831 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-15 12:58:00] 2025-10-15 16:57:59,831 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-15 12:58:00] 2025-10-15 16:57:59,831 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-15 12:58:00] 2025-10-15 16:57:59,832 | INFO     | [monitor] control thread has ended
[2025-10-15 12:58:00] 2025-10-15 16:57:59,984 [wrapper] ==== pilot stdout END ====
[2025-10-15 12:58:00] 2025-10-15 16:57:59,987 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-15 12:58:00] 2025-10-15 16:57:59,989 [wrapper] pilotpid: 3841738
[2025-10-15 12:58:00] 2025-10-15 16:57:59,991 [wrapper] Pilot exit status: 0
[2025-10-15 12:58:00] 2025-10-15 16:58:00,147 [wrapper] pandaids: 6845526774 6845526774
[2025-10-15 12:58:00] 2025-10-15 16:58:00,314 [wrapper] cleanup supervisor_pilot 1147892 3841739
[2025-10-15 12:58:00] 2025-10-15 16:58:00,326 [wrapper] Test setup, not cleaning
[2025-10-15 12:58:00] 2025-10-15 16:58:00,350 [wrapper] apfmon messages muted
[2025-10-15 12:58:00] 2025-10-15 16:58:00,354 [wrapper] ==== wrapper stdout END ====
[2025-10-15 12:58:00] 2025-10-15 16:58:00,356 [wrapper] ==== wrapper stderr END ====
[2025-10-15 12:58:00]  *** Error codes and diagnostics ***
[2025-10-15 12:58:00]     "exeErrorCode": 0,
[2025-10-15 12:58:00]     "exeErrorDiag": "",
[2025-10-15 12:58:00]     "pilotErrorCode": 0,
[2025-10-15 12:58:00]     "pilotErrorDiag": "",
[2025-10-15 12:58:00]  *** Listing of results directory ***
[2025-10-15 12:58:00] total 652312
[2025-10-15 12:58:00] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-15 12:58:00] -rw-r--r--. 1 boincer umatlas    557409 Oct 15 03:40 pilot3.tar.gz
[2025-10-15 12:58:00] -rw-r--r--. 1 boincer umatlas      5112 Oct 15 04:06 queuedata.json
[2025-10-15 12:58:00] -rwx------. 1 boincer umatlas     36292 Oct 15 04:06 runpilot2-wrapper.sh
[2025-10-15 12:58:00] -rw-r--r--. 1 boincer umatlas       100 Oct 15 04:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-15 12:58:00] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 15 04:45 run_atlas
[2025-10-15 12:58:00] -rw-r--r--. 1 boincer umatlas       105 Oct 15 04:45 job.xml
[2025-10-15 12:58:00] -rw-r--r--. 3 boincer umatlas 227924601 Oct 15 04:45 EVNT.46776529._000077.pool.root.1
[2025-10-15 12:58:00] -rw-r--r--. 3 boincer umatlas 227924601 Oct 15 04:45 ATLAS.root_0
[2025-10-15 12:58:00] -rw-r--r--. 2 boincer umatlas     15120 Oct 15 04:45 start_atlas.sh
[2025-10-15 12:58:00] drwxrwx--x. 2 boincer umatlas      4096 Oct 15 04:45 shared
[2025-10-15 12:58:00] -rw-r--r--. 2 boincer umatlas    569682 Oct 15 04:45 input.tar.gz
[2025-10-15 12:58:00] -rw-r--r--. 1 boincer umatlas         0 Oct 15 04:45 boinc_lockfile
[2025-10-15 12:58:00] -rw-r--r--. 1 boincer umatlas      2560 Oct 15 08:48 pandaJob.out
[2025-10-15 12:58:00] -rw-------. 1 boincer umatlas    974016 Oct 15 08:49 agis_schedconf.cvmfs.json
[2025-10-15 12:58:00] -rw-------. 1 boincer umatlas 203564724 Oct 15 12:55 HITS.46776533._001781.pool.root.1
[2025-10-15 12:58:00] -rw-r--r--. 1 boincer umatlas       531 Oct 15 12:55 boinc_task_state.xml
[2025-10-15 12:58:00] -rw-r--r--. 1 boincer umatlas      6658 Oct 15 12:56 init_data.xml
[2025-10-15 12:58:00] -rw-------. 1 boincer umatlas      1048 Oct 15 12:56 memory_monitor_summary.json
[2025-10-15 12:58:00] -rw-------. 1 boincer umatlas   1560740 Oct 15 12:57 agis_ddmendpoints.agis.ALL.json
[2025-10-15 12:58:00] -rw-------. 1 boincer umatlas    456502 Oct 15 12:57 log.46776533._001781.job.log.tgz.1
[2025-10-15 12:58:00] -rw-------. 1 boincer umatlas        96 Oct 15 12:57 pilot_heartbeat.json
[2025-10-15 12:58:00] -rw-------. 1 boincer umatlas      7821 Oct 15 12:57 heartbeat.json
[2025-10-15 12:58:00] -rw-r--r--. 1 boincer umatlas        28 Oct 15 12:57 wrapper_checkpoint.txt
[2025-10-15 12:58:00] -rw-------. 1 boincer umatlas       823 Oct 15 12:57 pilotlog.txt
[2025-10-15 12:58:00] -rw-r--r--. 1 boincer umatlas      8192 Oct 15 12:58 boinc_mmap_file
[2025-10-15 12:58:00] -rw-------. 1 boincer umatlas   1873710 Oct 15 12:58 log.46776533._001781.job.log.1
[2025-10-15 12:58:00] -rw-------. 1 boincer umatlas       357 Oct 15 12:58 output.list
[2025-10-15 12:58:00] -rw-r--r--. 1 boincer umatlas       620 Oct 15 12:58 runtime_log
[2025-10-15 12:58:00] -rw-------. 1 boincer umatlas   2344960 Oct 15 12:58 result.tar.gz
[2025-10-15 12:58:00] -rw-r--r--. 1 boincer umatlas      8779 Oct 15 12:58 runtime_log.err
[2025-10-15 12:58:00] -rw-------. 1 boincer umatlas       780 Oct 15 12:58 bkLNDmphBT8n9Rq4apOajLDm4fhM0noT9bVof3QYDmGzVMDmOkzuJo.diag
[2025-10-15 12:58:00] -rw-r--r--. 1 boincer umatlas     23388 Oct 15 12:58 stderr.txt
[2025-10-15 12:58:00] HITS file was successfully produced:
[2025-10-15 12:58:00] -rw-------. 1 boincer umatlas 203564724 Oct 15 12:55 shared/HITS.pool.root.1
[2025-10-15 12:58:00]  *** Contents of shared directory: ***
[2025-10-15 12:58:00] total 424252
[2025-10-15 12:58:00] -rw-r--r--. 3 boincer umatlas 227924601 Oct 15 04:45 ATLAS.root_0
[2025-10-15 12:58:00] -rw-r--r--. 2 boincer umatlas     15120 Oct 15 04:45 start_atlas.sh
[2025-10-15 12:58:00] -rw-r--r--. 2 boincer umatlas    569682 Oct 15 04:45 input.tar.gz
[2025-10-15 12:58:00] -rw-------. 1 boincer umatlas 203564724 Oct 15 12:55 HITS.pool.root.1
[2025-10-15 12:58:00] -rw-------. 1 boincer umatlas   2344960 Oct 15 12:58 result.tar.gz
12:58:22 (3831472): run_atlas exited; CPU time 53538.962966
12:58:22 (3831472): called boinc_finish(0)

</stderr_txt>
]]>

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