Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:49:38 (122219): wrapper (7.7.26015): starting
04:49:38 (122219): wrapper: running run_atlas (--nthreads 9)
[2025-10-15 04:49:38] Arguments: --nthreads 9
[2025-10-15 04:49:38] Threads: 9
[2025-10-15 04:49:38] Checking for CVMFS
[2025-10-15 04:49:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-15 04:49:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-15 04:49:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-15 04:49:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-15 04:49:42] 2.13.2.0 128705 120091 297540 151727 1 298 38821499 39288833 9347 16776704 0 78053413 99.509 100551279 33671 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-15 04:49:42] CVMFS is ok
[2025-10-15 04:49:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-15 04:49:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-15 04:49:42] Further information can be found at the LHC@home message board.
[2025-10-15 04:49:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-15 04:49:42] Checking for apptainer binary...
[2025-10-15 04:49:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-15 04:49:42] Running /usr/bin/apptainer --version
[2025-10-15 04:49:43] apptainer version 1.4.3-1.el9
[2025-10-15 04:49:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-15 04:49:44] c-210-15.aglt2.org
[2025-10-15 04:49:44] apptainer works
[2025-10-15 04:49:44] Set ATHENA_PROC_NUMBER=9
[2025-10-15 04:49:44] Set ATHENA_CORE_NUMBER=9
[2025-10-15 04:49:45] Starting ATLAS job with PandaID=6845504688
[2025-10-15 04:49:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-15 10:20:17]  *** The last 200 lines of the pilot log: ***
[2025-10-15 10:20:17] 2025-10-15 12:58:48,017 | INFO     | sum of deviations: -14041571509.597527
[2025-10-15 10:20:17] 2025-10-15 12:58:48,058 | INFO     | mean x: 1760525704.8174274
[2025-10-15 10:20:17] 2025-10-15 12:58:48,058 | INFO     | mean y: 2538041.713692946
[2025-10-15 10:20:17] 2025-10-15 12:58:48,058 | INFO     | -- intersect: 5694479761.775524
[2025-10-15 10:20:17] 2025-10-15 12:58:48,058 | INFO     | intersect: 5694479761.775524
[2025-10-15 10:20:17] 2025-10-15 12:58:48,059 | INFO     | chi2: 3.4713008198730604
[2025-10-15 10:20:17] 2025-10-15 12:58:48,059 | INFO     | sum of square deviations: 4078542286.2203217
[2025-10-15 10:20:17] 2025-10-15 12:58:48,061 | INFO     | sum of deviations: 16917788790.93221
[2025-10-15 10:20:17] 2025-10-15 12:58:48,061 | INFO     | mean x: 1760525552.3305085
[2025-10-15 10:20:17] 2025-10-15 12:58:48,104 | INFO     | mean y: 2555664.3983050846
[2025-10-15 10:20:17] 2025-10-15 12:58:48,104 | INFO     | -- intersect: -7300102335.739413
[2025-10-15 10:20:17] 2025-10-15 12:58:48,104 | INFO     | intersect: -7300102335.739413
[2025-10-15 10:20:17] 2025-10-15 12:58:48,105 | INFO     | chi2: 2.0792876272908867
[2025-10-15 10:20:17] 2025-10-15 12:58:48,105 | INFO     | current chi2=2.0792876272908867 (change=40.10062120266135 %)
[2025-10-15 10:20:17] 2025-10-15 12:58:48,105 | INFO     | sum of square deviations: 3824854310.2337747
[2025-10-15 10:20:17] 2025-10-15 12:58:48,107 | INFO     | sum of deviations: 16398833118.337666
[2025-10-15 10:20:17] 2025-10-15 12:58:48,107 | INFO     | mean x: 1760525399.8051949
[2025-10-15 10:20:17] 2025-10-15 12:58:48,107 | INFO     | mean y: 2555352.3852813854
[2025-10-15 10:20:17] 2025-10-15 12:58:48,107 | INFO     | -- intersect: -7545591554.741103
[2025-10-15 10:20:17] 2025-10-15 12:58:48,107 | INFO     | intersect: -7545591554.741103
[2025-10-15 10:20:17] 2025-10-15 12:58:48,160 | INFO     | chi2: 2.0801312068775433
[2025-10-15 10:20:17] 2025-10-15 12:58:48,160 | INFO     | current chi2=2.0801312068775433 (change=-0.04057060579712577 %)
[2025-10-15 10:20:17] 2025-10-15 12:58:48,160 | INFO     | right removable region: 230
[2025-10-15 10:20:17] 2025-10-15 12:58:48,168 | INFO     | sum of square deviations: 4078362814.1016793
[2025-10-15 10:20:17] 2025-10-15 12:58:48,170 | INFO     | sum of deviations: -59843032780.64408
[2025-10-15 10:20:17] 2025-10-15 12:58:48,170 | INFO     | mean x: 1760525857.3559322
[2025-10-15 10:20:17] 2025-10-15 12:58:48,170 | INFO     | mean y: 2564237.995762712
[2025-10-15 10:20:17] 2025-10-15 12:58:48,170 | INFO     | -- intersect: 25835284718.046688
[2025-10-15 10:20:17] 2025-10-15 12:58:48,170 | INFO     | intersect: 25835284718.046688
[2025-10-15 10:20:17] 2025-10-15 12:58:48,171 | INFO     | chi2: 1.6829921083961459
[2025-10-15 10:20:17] 2025-10-15 12:58:48,171 | INFO     | current chi2=1.6829921083961459 (change=51.51696163118211 %)
[2025-10-15 10:20:17] 2025-10-15 12:58:48,171 | INFO     | sum of square deviations: 3824667275.844165
[2025-10-15 10:20:17] 2025-10-15 12:58:48,220 | INFO     | sum of deviations: -57107939732.83118
[2025-10-15 10:20:17] 2025-10-15 12:58:48,221 | INFO     | mean x: 1760526009.883117
[2025-10-15 10:20:17] 2025-10-15 12:58:48,221 | INFO     | mean y: 2562544.3766233767
[2025-10-15 10:20:17] 2025-10-15 12:58:48,221 | INFO     | -- intersect: 26289819976.017136
[2025-10-15 10:20:17] 2025-10-15 12:58:48,221 | INFO     | intersect: 26289819976.017136
[2025-10-15 10:20:17] 2025-10-15 12:58:48,221 | INFO     | chi2: 1.6561598651790534
[2025-10-15 10:20:17] 2025-10-15 12:58:48,221 | INFO     | current chi2=1.6561598651790534 (change=1.59431782735232 %)
[2025-10-15 10:20:17] 2025-10-15 12:58:48,222 | INFO     | left removable region: 20
[2025-10-15 10:20:17] 2025-10-15 12:58:48,222 | INFO     | sum of square deviations: 2873895389.56666
[2025-10-15 10:20:17] 2025-10-15 12:58:48,223 | INFO     | sum of deviations: -2994289646.799997
[2025-10-15 10:20:17] 2025-10-15 12:58:48,223 | INFO     | mean x: 1760525979.4333334
[2025-10-15 10:20:17] 2025-10-15 12:58:48,223 | INFO     | mean y: 2565403.0857142857
[2025-10-15 10:20:17] 2025-10-15 12:58:48,223 | INFO     | -- intersect: 1836843968.7834451
[2025-10-15 10:20:17] 2025-10-15 12:58:48,261 | INFO     | intersect: 1836843968.7834451
[2025-10-15 10:20:17] 2025-10-15 12:58:48,261 | INFO     | chi2: 0.07065039616361801
[2025-10-15 10:20:17] 2025-10-15 12:58:48,284 | INFO     | -- intersect: 1836843968.7834451
[2025-10-15 10:20:17] 2025-10-15 12:58:48,284 | INFO     | current memory leak: -1.04 B/s (using 210 data points, chi2=0.07)
[2025-10-15 10:20:17] 2025-10-15 12:58:48,285 | INFO     | could have reported an average CPU frequency of 2600 MHz (12 samples)
[2025-10-15 10:20:17] 2025-10-15 12:58:48,285 | INFO     | ..............................
[2025-10-15 10:20:17] 2025-10-15 12:58:48,285 | INFO     | . Timing measurements:
[2025-10-15 10:20:17] 2025-10-15 12:58:48,285 | INFO     | . get job = 1 s
[2025-10-15 10:20:17] 2025-10-15 12:58:48,285 | INFO     | . initial setup = 6 s
[2025-10-15 10:20:17] 2025-10-15 12:58:48,285 | INFO     | . payload setup = 39 s
[2025-10-15 10:20:17] 2025-10-15 12:58:48,285 | INFO     | . stage-in = 0 s
[2025-10-15 10:20:17] 2025-10-15 12:58:48,285 | INFO     | . payload execution = 14708 s
[2025-10-15 10:20:17] 2025-10-15 12:58:48,285 | INFO     | . stage-out = 10 s
[2025-10-15 10:20:17] 2025-10-15 12:58:48,286 | INFO     | . log creation = 1 s
[2025-10-15 10:20:17] 2025-10-15 12:58:48,286 | INFO     | ..............................
[2025-10-15 10:20:17] 2025-10-15 12:58:49,599 | INFO     | 
[2025-10-15 10:20:17] 2025-10-15 12:58:49,599 | INFO     | job summary report
[2025-10-15 10:20:17] 2025-10-15 12:58:49,599 | INFO     | --------------------------------------------------
[2025-10-15 10:20:17] 2025-10-15 12:58:49,599 | INFO     | PanDA job id: 6845504688
[2025-10-15 10:20:17] 2025-10-15 12:58:49,599 | INFO     | task id: 46776533
[2025-10-15 10:20:17] 2025-10-15 12:58:49,599 | INFO     | errors: (none)
[2025-10-15 10:20:17] 2025-10-15 12:58:49,600 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-15 10:20:17] 2025-10-15 12:58:49,600 | INFO     | pilot state: finished 
[2025-10-15 10:20:17] 2025-10-15 12:58:49,600 | INFO     | transexitcode: 0
[2025-10-15 10:20:17] 2025-10-15 12:58:49,600 | INFO     | exeerrorcode: 0
[2025-10-15 10:20:17] 2025-10-15 12:58:49,600 | INFO     | exeerrordiag: 
[2025-10-15 10:20:17] 2025-10-15 12:58:49,600 | INFO     | exitcode: 0
[2025-10-15 10:20:17] 2025-10-15 12:58:49,600 | INFO     | exitmsg: OK
[2025-10-15 10:20:17] 2025-10-15 12:58:49,600 | INFO     | cpuconsumptiontime: 54673 s
[2025-10-15 10:20:17] 2025-10-15 12:58:49,600 | INFO     | nevents: 400
[2025-10-15 10:20:17] 2025-10-15 12:58:49,600 | INFO     | neventsw: 0
[2025-10-15 10:20:17] 2025-10-15 12:58:49,601 | INFO     | pid: 136488
[2025-10-15 10:20:17] 2025-10-15 12:58:49,601 | INFO     | pgrp: 136488
[2025-10-15 10:20:17] 2025-10-15 12:58:49,601 | INFO     | corecount: 9
[2025-10-15 10:20:17] 2025-10-15 12:58:49,601 | INFO     | event service: False
[2025-10-15 10:20:17] 2025-10-15 12:58:49,601 | INFO     | sizes: {0: 2348756, 1: 2348927, 2: 2348955, 13: 2348983, 25: 2349039, 30: 2349329, 36: 2349485, 14753: 2380409, 14754: 2380408, 14767: 2389462, 14768: 2389518, 148
[2025-10-15 10:20:17] 2025-10-15 12:58:49,601 | INFO     | --------------------------------------------------
[2025-10-15 10:20:17] 2025-10-15 12:58:49,601 | INFO     | 
[2025-10-15 10:20:17] 2025-10-15 12:58:49,601 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-15 10:20:17] 2025-10-15 12:58:49,806 | INFO     | time since job start (14882s) is within the limit (172800.0s)
[2025-10-15 10:20:17] 2025-10-15 12:58:49,936 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-15 10:20:17] 2025-10-15 12:58:49,936 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-15 10:20:17] 2025-10-15 12:58:49,936 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-15 10:20:17] 2025-10-15 12:58:49,936 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-15 10:20:17] 2025-10-15 12:58:49,936 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-15 10:20:17] 2025-10-15 12:58:49,937 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-15 10:20:17] 2025-10-15 12:58:49,937 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-15 10:20:17] 2025-10-15 12:58:49,937 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-15 10:20:17] 2025-10-15 12:58:49,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-15 10:20:17] 2025-10-15 12:58:49,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-15 10:20:17] 2025-10-15 12:58:49,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-15 10:20:17] 2025-10-15 12:58:49,937 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-15 10:20:17] 2025-10-15 12:58:49,937 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-15 10:20:17] 2025-10-15 12:58:49,938 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-15 10:20:17] 2025-10-15 12:58:49,938 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-15 10:20:17] 2025-10-15 12:58:49,938 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-15 10:20:17] 2025-10-15 12:58:49,938 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-15 10:20:17] 2025-10-15 12:58:49,938 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-15 10:20:17] 2025-10-15 12:58:49,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-15 10:20:17] 2025-10-15 12:58:49,938 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-15 10:20:17] 2025-10-15 12:58:49,938 | INFO     | job 6845504688 has completed (purged errors)
[2025-10-15 10:20:17] 2025-10-15 12:58:49,939 | INFO     | overall cleanup function is called
[2025-10-15 10:20:17] 2025-10-15 12:58:51,002 | INFO     | --- collectZombieJob: --- 10, [136488]
[2025-10-15 10:20:17] 2025-10-15 12:58:51,002 | INFO     | zombie collector waiting for pid 136488
[2025-10-15 10:20:17] 2025-10-15 12:58:51,002 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-15 10:20:17] 2025-10-15 12:58:51,002 | INFO     | collected zombie processes
[2025-10-15 10:20:17] 2025-10-15 12:58:51,002 | INFO     | will attempt to kill all subprocesses of pid=136488
[2025-10-15 10:20:17] 2025-10-15 12:58:55,827 | INFO     | PID=128127 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-15 10:20:17] 2025-10-15 12:58:55,827 | INFO     | .. there are 7 such processes running
[2025-10-15 10:20:17] 2025-10-15 12:58:55,953 | INFO     | process IDs to be killed: [136488] (in reverse order)
[2025-10-15 10:20:17] 2025-10-15 12:58:56,650 | WARNING  | found no corresponding commands to process id(s)
[2025-10-15 10:20:17] 2025-10-15 12:58:56,650 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-15 10:20:17] 2025-10-15 12:58:56,698 | INFO     | did not find any defunct processes belonging to 136488
[2025-10-15 10:20:17] 2025-10-15 12:58:56,768 | INFO     | did not find any defunct processes belonging to 136488
[2025-10-15 10:20:17] 2025-10-15 12:58:56,769 | INFO     | ready for new job
[2025-10-15 10:20:17] 2025-10-15 12:58:56,769 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-15 10:20:17] 2025-10-15 12:58:56,771 | INFO     | ***************************************
[2025-10-15 10:20:17] 2025-10-15 12:58:56,772 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-15 10:20:17] 2025-10-15 12:58:56,772 | INFO     | ***************************************
[2025-10-15 10:20:17] 2025-10-15 12:58:56,772 | INFO     | 
[2025-10-15 10:20:17] 2025-10-15 12:58:56,822 | INFO     | architecture information:
[2025-10-15 10:20:17] 2025-10-15 12:58:56,841 | INFO     | executing command: cat /etc/os-release
[2025-10-15 10:20:17] 2025-10-15 12:58:57,106 | INFO     | cat /etc/os-release:
[2025-10-15 10:20:17] NAME="CentOS Linux"
[2025-10-15 10:20:17] VERSION="7 (Core)"
[2025-10-15 10:20:17] ID="centos"
[2025-10-15 10:20:17] ID_LIKE="rhel fedora"
[2025-10-15 10:20:17] VERSION_ID="7"
[2025-10-15 10:20:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-15 10:20:17] ANSI_COLOR="0;31"
[2025-10-15 10:20:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-15 10:20:17] HOME_URL="https://www.centos.org/"
[2025-10-15 10:20:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-15 10:20:17] 
[2025-10-15 10:20:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-15 10:20:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-15 10:20:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-15 10:20:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-15 10:20:17] 
[2025-10-15 10:20:17] 2025-10-15 12:58:57,106 | INFO     | ***************************************
[2025-10-15 10:20:17] 2025-10-15 12:58:57,610 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-15 10:20:17] 2025-10-15 12:58:57,894 | INFO     | sufficient remaining disk space (52987691008 B)
[2025-10-15 10:20:17] 2025-10-15 12:58:57,895 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-15 10:20:17] 2025-10-15 12:58:57,895 | INFO     | current server update state: UPDATING_FINAL
[2025-10-15 10:20:17] 2025-10-15 12:58:57,895 | INFO     | update_server=False
[2025-10-15 10:20:17] 2025-10-15 12:58:57,895 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-15 10:20:17] 2025-10-15 12:58:57,996 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-15 10:20:17] 2025-10-15 12:58:57,996 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-15 10:20:17] 2025-10-15 12:58:57,996 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-15 10:20:17] 2025-10-15 12:58:57,996 | INFO     | will abort loop
[2025-10-15 10:20:17] 2025-10-15 12:58:58,218 | INFO     | all payload control threads have been joined
[2025-10-15 10:20:17] 2025-10-15 12:58:58,225 | INFO     | all job control threads have been joined
[2025-10-15 10:20:17] 2025-10-15 12:58:58,409 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-15 10:20:17] 2025-10-15 12:58:58,573 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-15 10:20:17] 2025-10-15 12:58:58,901 | INFO     | [job] retrieve thread has finished
[2025-10-15 10:20:17] 2025-10-15 12:58:58,912 | INFO     | [payload] validate_post thread has finished
[2025-10-15 10:20:17] 2025-10-15 12:58:58,950 | INFO     | all data control threads have been joined
[2025-10-15 10:20:17] 2025-10-15 12:58:59,002 | INFO     | [job] job monitor thread has finished
[2025-10-15 10:20:17] 2025-10-15 12:58:59,226 | INFO     | [payload] control thread has finished
[2025-10-15 10:20:17] 2025-10-15 12:58:59,234 | INFO     | [job] control thread has finished
[2025-10-15 10:20:17] 2025-10-15 12:58:59,366 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-15 10:20:17] 2025-10-15 12:58:59,415 | INFO     | [job] create_data_payload thread has finished
[2025-10-15 10:20:17] 2025-10-15 12:58:59,579 | INFO     | [data] copytool_in thread has finished
[2025-10-15 10:20:17] 2025-10-15 12:58:59,616 | INFO     | [job] queue monitor thread has finished
[2025-10-15 10:20:17] 2025-10-15 12:58:59,742 | INFO     | [job] validate thread has finished
[2025-10-15 10:20:17] 2025-10-15 12:58:59,746 | INFO     | [payload] execute_payloads thread has finished
[2025-10-15 10:20:17] 2025-10-15 12:58:59,746 | INFO     | [payload] validate_pre thread has finished
[2025-10-15 10:20:17] 2025-10-15 12:58:59,840 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-15 10:20:17] 2025-10-15 12:58:59,861 | INFO     | [payload] failed_post thread has finished
[2025-10-15 10:20:17] 2025-10-15 12:58:59,957 | INFO     | [data] control thread has finished
[2025-10-15 10:20:17] 2025-10-15 12:59:01,373 | INFO     | [data] copytool_out thread has finished
[2025-10-15 10:20:17] 2025-10-15 12:59:02,418 | INFO     | [data] queue_monitor thread has finished
[2025-10-15 10:20:17] 2025-10-15 12:59:13,037 | INFO     | [monitor] cgroup control has ended
[2025-10-15 10:20:17] 2025-10-15 12:59:13,220 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139768257062720)>', '<ExcThread(monitor, started 139767597479680)>']
[2025-10-15 10:20:17] 2025-10-15 12:59:18,283 | INFO     | all workflow threads have been joined
[2025-10-15 10:20:17] 2025-10-15 12:59:18,283 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-15 10:20:17] 2025-10-15 12:59:18,283 | INFO     | traces error code: 0
[2025-10-15 10:20:17] 2025-10-15 12:59:18,284 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-15 10:20:17] 2025-10-15 12:59:28,205 | INFO     | PID=128127 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-15 10:20:17] 2025-10-15 12:59:28,206 | INFO     | .. there are 7 such processes running
[2025-10-15 10:20:17] 2025-10-15 12:59:28,206 | INFO     | found 0 job(s) in 20 queues
[2025-10-15 10:20:17] 2025-10-15 12:59:28,206 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-15 10:20:17] 2025-10-15 12:59:28,206 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-15 10:20:17] 2025-10-15 12:59:28,206 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-15 10:20:17] 2025-10-15 12:59:28,206 | INFO     | [monitor] control thread has ended
[2025-10-15 10:20:17] 2025-10-15 12:59:28,366 [wrapper] ==== pilot stdout END ====
[2025-10-15 10:20:17] 2025-10-15 12:59:28,370 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-15 10:20:17] 2025-10-15 12:59:28,373 [wrapper] pilotpid: 128127
[2025-10-15 10:20:17] 2025-10-15 12:59:28,376 [wrapper] Pilot exit status: 0
[2025-10-15 10:20:17] 2025-10-15 12:59:28,582 [wrapper] pandaids: 6845504688
[2025-10-15 10:20:17] 2025-10-15 12:59:28,867 [wrapper] cleanup supervisor_pilot  444740 128128
[2025-10-15 10:20:17] 2025-10-15 12:59:28,878 [wrapper] Test setup, not cleaning
[2025-10-15 10:20:17] 2025-10-15 12:59:28,882 [wrapper] apfmon messages muted
[2025-10-15 10:20:17] 2025-10-15 12:59:28,903 [wrapper] ==== wrapper stdout END ====
[2025-10-15 10:20:17] 2025-10-15 12:59:28,960 [wrapper] ==== wrapper stderr END ====
[2025-10-15 10:20:17]  *** Error codes and diagnostics ***
[2025-10-15 10:20:17]     "exeErrorCode": 0,
[2025-10-15 10:20:17]     "exeErrorDiag": "",
[2025-10-15 10:20:17]     "pilotErrorCode": 0,
[2025-10-15 10:20:17]     "pilotErrorDiag": "",
[2025-10-15 10:20:17]  *** Listing of results directory ***
[2025-10-15 10:20:17] total 431692
[2025-10-15 10:20:17] -rw-r--r--. 1 boincer umatlas    557409 Oct 15 03:40 pilot3.tar.gz
[2025-10-15 10:20:17] -rwx------. 1 boincer umatlas     36292 Oct 15 03:41 runpilot2-wrapper.sh
[2025-10-15 10:20:17] -rw-r--r--. 1 boincer umatlas      5112 Oct 15 03:43 queuedata.json
[2025-10-15 10:20:17] -rw-r--r--. 1 boincer umatlas       100 Oct 15 04:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-15 10:20:17] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 15 04:49 run_atlas
[2025-10-15 10:20:17] -rw-r--r--. 1 boincer umatlas       105 Oct 15 04:49 job.xml
[2025-10-15 10:20:17] -rw-r--r--. 2 boincer umatlas 229348504 Oct 15 04:49 EVNT.46776529._000059.pool.root.1
[2025-10-15 10:20:17] -rw-r--r--. 2 boincer umatlas     15120 Oct 15 04:49 start_atlas.sh
[2025-10-15 10:20:17] drwxrwx--x. 2 boincer umatlas      4096 Oct 15 04:49 shared
[2025-10-15 10:20:17] -rw-r--r--. 2 boincer umatlas    569678 Oct 15 04:49 input.tar.gz
[2025-10-15 10:20:17] -rw-r--r--. 1 boincer umatlas         0 Oct 15 04:49 boinc_lockfile
[2025-10-15 10:20:17] -rw-r--r--. 1 boincer umatlas      2560 Oct 15 04:49 pandaJob.out
[2025-10-15 10:20:17] -rw-------. 1 boincer umatlas    974007 Oct 15 04:50 agis_schedconf.cvmfs.json
[2025-10-15 10:20:17] drwx------. 5 boincer umatlas      4096 Oct 15 04:50 pilot3
[2025-10-15 10:20:17] -rw-------. 1 boincer umatlas 203989367 Oct 15 08:55 HITS.46776533._001360.pool.root.1
[2025-10-15 10:20:17] -rw-r--r--. 1 boincer umatlas       531 Oct 15 08:55 boinc_task_state.xml
[2025-10-15 10:20:17] -rw-------. 1 boincer umatlas      1040 Oct 15 08:57 memory_monitor_summary.json
[2025-10-15 10:20:17] -rw-------. 1 boincer umatlas   1560740 Oct 15 08:57 agis_ddmendpoints.agis.ALL.json
[2025-10-15 10:20:17] -rw-------. 1 boincer umatlas    473482 Oct 15 08:57 log.46776533._001360.job.log.tgz.1
[2025-10-15 10:20:17] -rw-------. 1 boincer umatlas      7823 Oct 15 08:58 heartbeat.json
[2025-10-15 10:20:17] -rw-------. 1 boincer umatlas        95 Oct 15 08:58 pilot_heartbeat.json
[2025-10-15 10:20:17] -rw-------. 1 boincer umatlas       821 Oct 15 08:59 pilotlog.txt
[2025-10-15 10:20:17] -rw-------. 1 boincer umatlas   1933352 Oct 15 08:59 log.46776533._001360.job.log.1
[2025-10-15 10:20:17] -rw-------. 1 boincer umatlas       357 Oct 15 08:59 output.list
[2025-10-15 10:20:17] -rw-r--r--. 1 boincer umatlas       620 Oct 15 08:59 runtime_log
[2025-10-15 10:20:17] -rw-------. 1 boincer umatlas   2426880 Oct 15 08:59 result.tar.gz
[2025-10-15 10:20:17] -rw-------. 1 boincer umatlas       656 Oct 15 08:59 W3gMDm5JBT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmm6mNDmhSqCkm.diag
[2025-10-15 10:20:17] -rw-r--r--. 1 boincer umatlas      8704 Oct 15 08:59 runtime_log.err
[2025-10-15 10:20:17] -rw-r--r--. 1 boincer umatlas      6660 Oct 15 10:20 init_data.xml
[2025-10-15 10:20:17] -rw-r--r--. 1 boincer umatlas      8192 Oct 15 10:20 boinc_mmap_file
[2025-10-15 10:20:17] -rw-r--r--. 1 boincer umatlas        28 Oct 15 10:20 wrapper_checkpoint.txt
[2025-10-15 10:20:17] -rw-r--r--. 1 boincer umatlas     21204 Oct 15 10:20 stderr.txt
[2025-10-15 10:20:17] HITS file was successfully produced:
[2025-10-15 10:20:17] -rw-------. 1 boincer umatlas 203989367 Oct 15 08:55 shared/HITS.pool.root.1
[2025-10-15 10:20:17]  *** Contents of shared directory: ***
[2025-10-15 10:20:17] total 426140
[2025-10-15 10:20:17] -rw-r--r--. 2 boincer umatlas 229348504 Oct 15 04:49 ATLAS.root_0
[2025-10-15 10:20:17] -rw-r--r--. 2 boincer umatlas     15120 Oct 15 04:49 start_atlas.sh
[2025-10-15 10:20:17] -rw-r--r--. 2 boincer umatlas    569678 Oct 15 04:49 input.tar.gz
[2025-10-15 10:20:17] -rw-------. 1 boincer umatlas 203989367 Oct 15 08:55 HITS.pool.root.1
[2025-10-15 10:20:17] -rw-------. 1 boincer umatlas   2426880 Oct 15 08:59 result.tar.gz
10:20:19 (122219): run_atlas exited; CPU time 54941.476300
10:20:19 (122219): called boinc_finish(0)

</stderr_txt>
]]>

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