Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:48:38 (1318963): wrapper (7.7.26015): starting
03:48:38 (1318963): wrapper: running run_atlas (--nthreads 12)
[2025-10-15 03:48:38] Arguments: --nthreads 12
[2025-10-15 03:48:38] Threads: 12
[2025-10-15 03:48:38] Checking for CVMFS
[2025-10-15 03:48:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-15 03:48:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-15 03:48:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-15 03:48:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-15 03:48:39] 2.13.2.0 981271 133303 281712 151726 1 369 28326668 32935936 18332 16776704 0 113230067 99.679 92211231 29628 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-15 03:48:39] CVMFS is ok
[2025-10-15 03:48:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-15 03:48:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-15 03:48:39] Further information can be found at the LHC@home message board.
[2025-10-15 03:48:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-15 03:48:39] Checking for apptainer binary...
[2025-10-15 03:48:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-15 03:48:39] Running /usr/bin/apptainer --version
[2025-10-15 03:48:39] apptainer version 1.4.3-1.el9
[2025-10-15 03:48:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-15 03:48:40] c-4-36.aglt2.org
[2025-10-15 03:48:40] apptainer works
[2025-10-15 03:48:40] Set ATHENA_PROC_NUMBER=12
[2025-10-15 03:48:40] Set ATHENA_CORE_NUMBER=12
[2025-10-15 03:48:40] Starting ATLAS job with PandaID=6845502654
[2025-10-15 03:48:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-15 08:29:57]  *** The last 200 lines of the pilot log: ***
[2025-10-15 08:29:57] 2025-10-15 12:29:00,571 | INFO     | time since job start (16778s) is within the limit (172800.0s)
[2025-10-15 08:29:57] 2025-10-15 12:29:02,752 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-15 08:29:57] 2025-10-15 12:29:02,765 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1696749999987
[2025-10-15 08:29:57] 2025-10-15 12:29:02,776 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6845502654/memory_monitor_summary.json (trf name=prmon)
[2025-10-15 08:29:57] 2025-10-15 12:29:02,781 | INFO     | extracted standard info from prmon json
[2025-10-15 08:29:57] 2025-10-15 12:29:02,781 | INFO     | extracted standard memory fields from prmon json
[2025-10-15 08:29:57] 2025-10-15 12:29:02,781 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-15 08:29:57] 2025-10-15 12:29:02,782 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-15 08:29:57] 2025-10-15 12:29:02,783 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-15 08:29:57] 2025-10-15 12:29:02,790 | INFO     | fitting pss+swap vs Time
[2025-10-15 08:29:57] 2025-10-15 12:29:02,790 | INFO     | sum of square deviations: 6379255623.49267
[2025-10-15 08:29:57] 2025-10-15 12:29:02,793 | INFO     | sum of deviations: 50190772865.16785
[2025-10-15 08:29:57] 2025-10-15 12:29:02,793 | INFO     | mean x: 1760522975.8868613
[2025-10-15 08:29:57] 2025-10-15 12:29:02,793 | INFO     | mean y: 2297827.102189781
[2025-10-15 08:29:57] 2025-10-15 12:29:02,793 | INFO     | -- intersect: -13849162910.924833
[2025-10-15 08:29:57] 2025-10-15 12:29:02,793 | INFO     | intersect: -13849162910.924833
[2025-10-15 08:29:57] 2025-10-15 12:29:02,794 | INFO     | chi2: 3.0041009927430395
[2025-10-15 08:29:57] 2025-10-15 12:29:02,795 | INFO     | sum of square deviations: 6036392281.79181
[2025-10-15 08:29:57] 2025-10-15 12:29:02,797 | INFO     | sum of deviations: 68279828953.0409
[2025-10-15 08:29:57] 2025-10-15 12:29:02,797 | INFO     | mean x: 1760522823.3866172
[2025-10-15 08:29:57] 2025-10-15 12:29:02,797 | INFO     | mean y: 2305769.0669144983
[2025-10-15 08:29:57] 2025-10-15 12:29:02,797 | INFO     | -- intersect: -19911608310.268055
[2025-10-15 08:29:57] 2025-10-15 12:29:02,797 | INFO     | intersect: -19911608310.268055
[2025-10-15 08:29:57] 2025-10-15 12:29:02,798 | INFO     | chi2: 2.3214465083775657
[2025-10-15 08:29:57] 2025-10-15 12:29:02,798 | INFO     | current chi2=2.3214465083775657 (change=22.72408570865466 %)
[2025-10-15 08:29:57] 2025-10-15 12:29:02,798 | INFO     | right removable region: 268
[2025-10-15 08:29:57] 2025-10-15 12:29:02,799 | INFO     | sum of square deviations: 6036361050.230449
[2025-10-15 08:29:57] 2025-10-15 12:29:02,801 | INFO     | sum of deviations: -2459393583.9999866
[2025-10-15 08:29:57] 2025-10-15 12:29:02,801 | INFO     | mean x: 1760523128.394052
[2025-10-15 08:29:57] 2025-10-15 12:29:02,801 | INFO     | mean y: 2321133.0
[2025-10-15 08:29:57] 2025-10-15 12:29:02,801 | INFO     | -- intersect: 719610779.9290248
[2025-10-15 08:29:57] 2025-10-15 12:29:02,802 | INFO     | intersect: 719610779.9290248
[2025-10-15 08:29:57] 2025-10-15 12:29:02,803 | INFO     | chi2: 1.1007463748036472
[2025-10-15 08:29:57] 2025-10-15 12:29:02,803 | INFO     | current chi2=1.1007463748036472 (change=63.35854295635522 %)
[2025-10-15 08:29:57] 2025-10-15 12:29:02,804 | INFO     | sum of square deviations: 5705978339.439413
[2025-10-15 08:29:57] 2025-10-15 12:29:02,806 | INFO     | sum of deviations: -12520370324.749979
[2025-10-15 08:29:57] 2025-10-15 12:29:02,806 | INFO     | mean x: 1760523280.9015152
[2025-10-15 08:29:57] 2025-10-15 12:29:02,806 | INFO     | mean y: 2325741.625
[2025-10-15 08:29:57] 2025-10-15 12:29:02,806 | INFO     | -- intersect: 3865362390.37547
[2025-10-15 08:29:57] 2025-10-15 12:29:02,806 | INFO     | intersect: 3865362390.37547
[2025-10-15 08:29:57] 2025-10-15 12:29:02,807 | INFO     | chi2: 1.0089704688325094
[2025-10-15 08:29:57] 2025-10-15 12:29:02,807 | INFO     | current chi2=1.0089704688325094 (change=8.337606924893025 %)
[2025-10-15 08:29:57] 2025-10-15 12:29:02,807 | INFO     | left removable region: 20
[2025-10-15 08:29:57] 2025-10-15 12:29:02,808 | INFO     | sum of square deviations: 4730155785.221761
[2025-10-15 08:29:57] 2025-10-15 12:29:02,810 | INFO     | sum of deviations: 25587095291.516125
[2025-10-15 08:29:57] 2025-10-15 12:29:02,810 | INFO     | mean x: 1760523402.9153225
[2025-10-15 08:29:57] 2025-10-15 12:29:02,810 | INFO     | mean y: 2324384.5483870967
[2025-10-15 08:29:57] 2025-10-15 12:29:02,810 | INFO     | -- intersect: -9520972969.436478
[2025-10-15 08:29:57] 2025-10-15 12:29:02,810 | INFO     | intersect: -9520972969.436478
[2025-10-15 08:29:57] 2025-10-15 12:29:02,811 | INFO     | chi2: 0.16898569801873808
[2025-10-15 08:29:57] 2025-10-15 12:29:02,811 | INFO     | -- intersect: -9520972969.436478
[2025-10-15 08:29:57] 2025-10-15 12:29:02,811 | INFO     | current memory leak: 5.41 B/s (using 248 data points, chi2=0.17)
[2025-10-15 08:29:57] 2025-10-15 12:29:02,812 | INFO     | could have reported an average CPU frequency of 2600 MHz (13 samples)
[2025-10-15 08:29:57] 2025-10-15 12:29:02,812 | INFO     | ..............................
[2025-10-15 08:29:57] 2025-10-15 12:29:02,813 | INFO     | . Timing measurements:
[2025-10-15 08:29:57] 2025-10-15 12:29:02,813 | INFO     | . get job = 0 s
[2025-10-15 08:29:57] 2025-10-15 12:29:02,813 | INFO     | . initial setup = 5 s
[2025-10-15 08:29:57] 2025-10-15 12:29:02,813 | INFO     | . payload setup = 28 s
[2025-10-15 08:29:57] 2025-10-15 12:29:02,813 | INFO     | . stage-in = 0 s
[2025-10-15 08:29:57] 2025-10-15 12:29:02,813 | INFO     | . payload execution = 16683 s
[2025-10-15 08:29:57] 2025-10-15 12:29:02,813 | INFO     | . stage-out = 5 s
[2025-10-15 08:29:57] 2025-10-15 12:29:02,813 | INFO     | . log creation = 0 s
[2025-10-15 08:29:57] 2025-10-15 12:29:02,813 | INFO     | ..............................
[2025-10-15 08:29:57] 2025-10-15 12:29:03,234 | INFO     | 
[2025-10-15 08:29:57] 2025-10-15 12:29:03,234 | INFO     | job summary report
[2025-10-15 08:29:57] 2025-10-15 12:29:03,234 | INFO     | --------------------------------------------------
[2025-10-15 08:29:57] 2025-10-15 12:29:03,235 | INFO     | PanDA job id: 6845502654
[2025-10-15 08:29:57] 2025-10-15 12:29:03,235 | INFO     | task id: 46776533
[2025-10-15 08:29:57] 2025-10-15 12:29:03,235 | INFO     | errors: (none)
[2025-10-15 08:29:57] 2025-10-15 12:29:03,235 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-15 08:29:57] 2025-10-15 12:29:03,235 | INFO     | pilot state: finished 
[2025-10-15 08:29:57] 2025-10-15 12:29:03,235 | INFO     | transexitcode: 0
[2025-10-15 08:29:57] 2025-10-15 12:29:03,235 | INFO     | exeerrorcode: 0
[2025-10-15 08:29:57] 2025-10-15 12:29:03,235 | INFO     | exeerrordiag: 
[2025-10-15 08:29:57] 2025-10-15 12:29:03,235 | INFO     | exitcode: 0
[2025-10-15 08:29:57] 2025-10-15 12:29:03,235 | INFO     | exitmsg: OK
[2025-10-15 08:29:57] 2025-10-15 12:29:03,236 | INFO     | cpuconsumptiontime: 52516 s
[2025-10-15 08:29:57] 2025-10-15 12:29:03,236 | INFO     | nevents: 400
[2025-10-15 08:29:57] 2025-10-15 12:29:03,236 | INFO     | neventsw: 0
[2025-10-15 08:29:57] 2025-10-15 12:29:03,236 | INFO     | pid: 1332023
[2025-10-15 08:29:57] 2025-10-15 12:29:03,236 | INFO     | pgrp: 1332023
[2025-10-15 08:29:57] 2025-10-15 12:29:03,236 | INFO     | corecount: 12
[2025-10-15 08:29:57] 2025-10-15 12:29:03,236 | INFO     | event service: False
[2025-10-15 08:29:57] 2025-10-15 12:29:03,236 | INFO     | sizes: {0: 2348752, 1: 2348780, 2: 2348951, 12: 2348979, 18: 2349269, 23: 2349297, 16717: 2381328, 16718: 2381327, 16723: 2390381, 16724: 2390437, 16742: 2390631}
[2025-10-15 08:29:57] 2025-10-15 12:29:03,236 | INFO     | --------------------------------------------------
[2025-10-15 08:29:57] 2025-10-15 12:29:03,237 | INFO     | 
[2025-10-15 08:29:57] 2025-10-15 12:29:03,237 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-15 08:29:57] 2025-10-15 12:29:03,545 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-15 08:29:57] 2025-10-15 12:29:03,546 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-15 08:29:57] 2025-10-15 12:29:03,546 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-15 08:29:57] 2025-10-15 12:29:03,546 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-15 08:29:57] 2025-10-15 12:29:03,546 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-15 08:29:57] 2025-10-15 12:29:03,546 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-15 08:29:57] 2025-10-15 12:29:03,546 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-15 08:29:57] 2025-10-15 12:29:03,546 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-15 08:29:57] 2025-10-15 12:29:03,546 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-15 08:29:57] 2025-10-15 12:29:03,546 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-15 08:29:57] 2025-10-15 12:29:03,546 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-15 08:29:57] 2025-10-15 12:29:03,546 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-15 08:29:57] 2025-10-15 12:29:03,558 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-15 08:29:57] 2025-10-15 12:29:03,558 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-15 08:29:57] 2025-10-15 12:29:03,558 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-15 08:29:57] 2025-10-15 12:29:03,559 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-15 08:29:57] 2025-10-15 12:29:03,559 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-15 08:29:57] 2025-10-15 12:29:03,559 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-15 08:29:57] 2025-10-15 12:29:03,559 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-15 08:29:57] 2025-10-15 12:29:03,559 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-15 08:29:57] 2025-10-15 12:29:03,559 | INFO     | job 6845502654 has completed (purged errors)
[2025-10-15 08:29:57] 2025-10-15 12:29:03,560 | INFO     | overall cleanup function is called
[2025-10-15 08:29:57] 2025-10-15 12:29:03,552 | INFO     | PID=1322947 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-15 08:29:57] 2025-10-15 12:29:03,595 | INFO     | .. there are 32 such processes running
[2025-10-15 08:29:57] 2025-10-15 12:29:04,628 | INFO     | --- collectZombieJob: --- 10, [1332023]
[2025-10-15 08:29:57] 2025-10-15 12:29:04,628 | INFO     | zombie collector waiting for pid 1332023
[2025-10-15 08:29:57] 2025-10-15 12:29:04,628 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-15 08:29:57] 2025-10-15 12:29:04,628 | INFO     | collected zombie processes
[2025-10-15 08:29:57] 2025-10-15 12:29:04,628 | INFO     | will attempt to kill all subprocesses of pid=1332023
[2025-10-15 08:29:57] 2025-10-15 12:29:05,864 | INFO     | process IDs to be killed: [1332023] (in reverse order)
[2025-10-15 08:29:57] 2025-10-15 12:29:06,223 | WARNING  | found no corresponding commands to process id(s)
[2025-10-15 08:29:57] 2025-10-15 12:29:06,224 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-15 08:29:57] 2025-10-15 12:29:06,249 | INFO     | did not find any defunct processes belonging to 1332023
[2025-10-15 08:29:57] 2025-10-15 12:29:06,264 | INFO     | did not find any defunct processes belonging to 1332023
[2025-10-15 08:29:57] 2025-10-15 12:29:06,264 | INFO     | ready for new job
[2025-10-15 08:29:57] 2025-10-15 12:29:06,265 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-15 08:29:57] 2025-10-15 12:29:06,267 | INFO     | ***************************************
[2025-10-15 08:29:57] 2025-10-15 12:29:06,268 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-15 08:29:57] 2025-10-15 12:29:06,268 | INFO     | ***************************************
[2025-10-15 08:29:57] 2025-10-15 12:29:06,268 | INFO     | 
[2025-10-15 08:29:57] 2025-10-15 12:29:06,284 | INFO     | architecture information:
[2025-10-15 08:29:57] 2025-10-15 12:29:06,286 | INFO     | executing command: cat /etc/os-release
[2025-10-15 08:29:57] 2025-10-15 12:29:06,466 | INFO     | cat /etc/os-release:
[2025-10-15 08:29:57] NAME="CentOS Linux"
[2025-10-15 08:29:57] VERSION="7 (Core)"
[2025-10-15 08:29:57] ID="centos"
[2025-10-15 08:29:57] ID_LIKE="rhel fedora"
[2025-10-15 08:29:57] VERSION_ID="7"
[2025-10-15 08:29:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-15 08:29:57] ANSI_COLOR="0;31"
[2025-10-15 08:29:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-15 08:29:57] HOME_URL="https://www.centos.org/"
[2025-10-15 08:29:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-15 08:29:57] 
[2025-10-15 08:29:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-15 08:29:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-15 08:29:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-15 08:29:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-15 08:29:57] 
[2025-10-15 08:29:57] 2025-10-15 12:29:06,466 | INFO     | ***************************************
[2025-10-15 08:29:57] 2025-10-15 12:29:06,976 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-15 08:29:57] 2025-10-15 12:29:07,176 | INFO     | sufficient remaining disk space (75783733248 B)
[2025-10-15 08:29:57] 2025-10-15 12:29:07,177 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-15 08:29:57] 2025-10-15 12:29:07,177 | INFO     | current server update state: UPDATING_FINAL
[2025-10-15 08:29:57] 2025-10-15 12:29:07,177 | INFO     | update_server=False
[2025-10-15 08:29:57] 2025-10-15 12:29:07,177 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-15 08:29:57] 2025-10-15 12:29:07,181 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-15 08:29:57] 2025-10-15 12:29:07,181 | INFO     | aborting loop
[2025-10-15 08:29:57] 2025-10-15 12:29:07,335 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-15 08:29:57] 2025-10-15 12:29:07,957 | INFO     | all data control threads have been joined
[2025-10-15 08:29:57] 2025-10-15 12:29:08,059 | INFO     | all payload control threads have been joined
[2025-10-15 08:29:57] 2025-10-15 12:29:08,067 | INFO     | all job control threads have been joined
[2025-10-15 08:29:57] 2025-10-15 12:29:08,187 | INFO     | [job] job monitor thread has finished
[2025-10-15 08:29:57] 2025-10-15 12:29:08,190 | INFO     | [job] retrieve thread has finished
[2025-10-15 08:29:57] 2025-10-15 12:29:08,262 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-15 08:29:57] 2025-10-15 12:29:08,490 | INFO     | [data] copytool_in thread has finished
[2025-10-15 08:29:57] 2025-10-15 12:29:08,842 | INFO     | [payload] failed_post thread has finished
[2025-10-15 08:29:57] 2025-10-15 12:29:08,963 | INFO     | [data] control thread has finished
[2025-10-15 08:29:57] 2025-10-15 12:29:09,065 | INFO     | [payload] control thread has finished
[2025-10-15 08:29:57] 2025-10-15 12:29:09,073 | INFO     | [job] control thread has finished
[2025-10-15 08:29:57] 2025-10-15 12:29:09,120 | INFO     | [job] validate thread has finished
[2025-10-15 08:29:57] 2025-10-15 12:29:09,120 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-15 08:29:57] 2025-10-15 12:29:09,158 | INFO     | [payload] validate_pre thread has finished
[2025-10-15 08:29:57] 2025-10-15 12:29:09,181 | INFO     | [job] create_data_payload thread has finished
[2025-10-15 08:29:57] 2025-10-15 12:29:09,238 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-15 08:29:57] 2025-10-15 12:29:09,271 | INFO     | [job] queue monitor thread has finished
[2025-10-15 08:29:57] 2025-10-15 12:29:09,358 | INFO     | [data] copytool_out thread has finished
[2025-10-15 08:29:57] 2025-10-15 12:29:09,420 | INFO     | [payload] execute_payloads thread has finished
[2025-10-15 08:29:57] 2025-10-15 12:29:09,532 | INFO     | [payload] validate_post thread has finished
[2025-10-15 08:29:57] 2025-10-15 12:29:13,260 | INFO     | [data] queue_monitor thread has finished
[2025-10-15 08:29:57] 2025-10-15 12:29:37,991 | INFO     | PID=1322947 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-15 08:29:57] 2025-10-15 12:29:37,991 | INFO     | .. there are 32 such processes running
[2025-10-15 08:29:57] 2025-10-15 12:29:37,996 | INFO     | found 0 job(s) in 20 queues
[2025-10-15 08:29:57] 2025-10-15 12:29:37,996 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-15 08:29:57] 2025-10-15 12:29:37,996 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-15 08:29:57] 2025-10-15 12:29:51,650 | INFO     | [monitor] cgroup control has ended
[2025-10-15 08:29:57] 2025-10-15 12:29:52,068 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140583947585344)>', '<ExcThread(monitor, started 140583322507008)>']
[2025-10-15 08:29:57] 2025-10-15 12:29:52,150 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-15 08:29:57] 2025-10-15 12:29:52,150 | INFO     | [monitor] control thread has ended
[2025-10-15 08:29:57] 2025-10-15 12:29:57,094 | INFO     | all workflow threads have been joined
[2025-10-15 08:29:57] 2025-10-15 12:29:57,094 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-15 08:29:57] 2025-10-15 12:29:57,094 | INFO     | traces error code: 0
[2025-10-15 08:29:57] 2025-10-15 12:29:57,095 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-15 08:29:57] 2025-10-15 12:29:57,423 [wrapper] ==== pilot stdout END ====
[2025-10-15 08:29:57] 2025-10-15 12:29:57,426 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-15 08:29:57] 2025-10-15 12:29:57,429 [wrapper] pilotpid: 1322947
[2025-10-15 08:29:57] 2025-10-15 12:29:57,432 [wrapper] Pilot exit status: 0
[2025-10-15 08:29:57] 2025-10-15 12:29:57,465 [wrapper] pandaids: 6845502654
[2025-10-15 08:29:57] 2025-10-15 12:29:57,560 [wrapper] cleanup supervisor_pilot 2848143 1322948
[2025-10-15 08:29:57] 2025-10-15 12:29:57,578 [wrapper] Test setup, not cleaning
[2025-10-15 08:29:57] 2025-10-15 12:29:57,601 [wrapper] apfmon messages muted
[2025-10-15 08:29:57] 2025-10-15 12:29:57,620 [wrapper] ==== wrapper stdout END ====
[2025-10-15 08:29:57] 2025-10-15 12:29:57,635 [wrapper] ==== wrapper stderr END ====
[2025-10-15 08:29:57]  *** Error codes and diagnostics ***
[2025-10-15 08:29:57]     "exeErrorCode": 0,
[2025-10-15 08:29:57]     "exeErrorDiag": "",
[2025-10-15 08:29:57]     "pilotErrorCode": 0,
[2025-10-15 08:29:57]     "pilotErrorDiag": "",
[2025-10-15 08:29:57]  *** Listing of results directory ***
[2025-10-15 08:29:57] total 427860
[2025-10-15 08:29:57] -rw-r--r--. 1 boincer umatlas    557409 Oct 15 03:40 pilot3.tar.gz
[2025-10-15 08:29:57] -rwx------. 1 boincer umatlas     36292 Oct 15 03:41 runpilot2-wrapper.sh
[2025-10-15 08:29:57] -rw-r--r--. 1 boincer umatlas      5112 Oct 15 03:43 queuedata.json
[2025-10-15 08:29:57] -rw-r--r--. 1 boincer umatlas       100 Oct 15 03:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-15 08:29:57] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 15 03:48 run_atlas
[2025-10-15 08:29:57] -rw-r--r--. 1 boincer umatlas       105 Oct 15 03:48 job.xml
[2025-10-15 08:29:57] -rw-r--r--. 2 boincer umatlas 225416354 Oct 15 03:48 EVNT.46776529._000042.pool.root.1
[2025-10-15 08:29:57] -rw-r--r--. 2 boincer umatlas     15120 Oct 15 03:48 start_atlas.sh
[2025-10-15 08:29:57] drwxrwx--x. 2 boincer umatlas      4096 Oct 15 03:48 shared
[2025-10-15 08:29:57] -rw-r--r--. 2 boincer umatlas    569680 Oct 15 03:48 input.tar.gz
[2025-10-15 08:29:57] -rw-r--r--. 1 boincer umatlas         0 Oct 15 03:48 boinc_lockfile
[2025-10-15 08:29:57] -rw-r--r--. 1 boincer umatlas      2558 Oct 15 03:48 pandaJob.out
[2025-10-15 08:29:57] -rw-------. 1 boincer umatlas    974007 Oct 15 03:49 agis_schedconf.cvmfs.json
[2025-10-15 08:29:57] drwx------. 5 boincer umatlas      4096 Oct 15 03:49 pilot3
[2025-10-15 08:29:57] -rw-------. 1 boincer umatlas 203477693 Oct 15 08:27 HITS.46776533._000937.pool.root.1
[2025-10-15 08:29:57] -rw-r--r--. 1 boincer umatlas      6658 Oct 15 08:27 init_data.xml
[2025-10-15 08:29:57] -rw-r--r--. 1 boincer umatlas       530 Oct 15 08:27 boinc_task_state.xml
[2025-10-15 08:29:57] -rw-------. 1 boincer umatlas      1046 Oct 15 08:28 memory_monitor_summary.json
[2025-10-15 08:29:57] -rw-------. 1 boincer umatlas   1560740 Oct 15 08:28 agis_ddmendpoints.agis.ALL.json
[2025-10-15 08:29:57] -rw-------. 1 boincer umatlas    549070 Oct 15 08:28 log.46776533._000937.job.log.tgz.1
[2025-10-15 08:29:57] -rw-------. 1 boincer umatlas      7823 Oct 15 08:29 heartbeat.json
[2025-10-15 08:29:57] -rw-------. 1 boincer umatlas        95 Oct 15 08:29 pilot_heartbeat.json
[2025-10-15 08:29:57] -rw-r--r--. 1 boincer umatlas        28 Oct 15 08:29 wrapper_checkpoint.txt
[2025-10-15 08:29:57] -rw-r--r--. 1 boincer umatlas      8192 Oct 15 08:29 boinc_mmap_file
[2025-10-15 08:29:57] -rw-------. 1 boincer umatlas      4824 Oct 15 08:29 pilotlog.txt
[2025-10-15 08:29:57] -rw-------. 1 boincer umatlas   2119330 Oct 15 08:29 log.46776533._000937.job.log.1
[2025-10-15 08:29:57] -rw-------. 1 boincer umatlas       357 Oct 15 08:29 output.list
[2025-10-15 08:29:57] -rw-r--r--. 1 boincer umatlas       620 Oct 15 08:29 runtime_log
[2025-10-15 08:29:57] -rw-------. 1 boincer umatlas   2682880 Oct 15 08:29 result.tar.gz
[2025-10-15 08:29:57] -rw-------. 1 boincer umatlas       655 Oct 15 08:29 YcnKDm4JBT8n9Rq4apOajLDm4fhM0noT9bVof3QYDmeuVMDm8RvPjm.diag
[2025-10-15 08:29:57] -rw-r--r--. 1 boincer umatlas      8696 Oct 15 08:29 runtime_log.err
[2025-10-15 08:29:57] -rw-r--r--. 1 boincer umatlas     21302 Oct 15 08:29 stderr.txt
[2025-10-15 08:29:57] HITS file was successfully produced:
[2025-10-15 08:29:57] -rw-------. 1 boincer umatlas 203477693 Oct 15 08:27 shared/HITS.pool.root.1
[2025-10-15 08:29:57]  *** Contents of shared directory: ***
[2025-10-15 08:29:57] total 422048
[2025-10-15 08:29:57] -rw-r--r--. 2 boincer umatlas 225416354 Oct 15 03:48 ATLAS.root_0
[2025-10-15 08:29:57] -rw-r--r--. 2 boincer umatlas     15120 Oct 15 03:48 start_atlas.sh
[2025-10-15 08:29:57] -rw-r--r--. 2 boincer umatlas    569680 Oct 15 03:48 input.tar.gz
[2025-10-15 08:29:57] -rw-------. 1 boincer umatlas 203477693 Oct 15 08:27 HITS.pool.root.1
[2025-10-15 08:29:57] -rw-------. 1 boincer umatlas   2682880 Oct 15 08:29 result.tar.gz
08:30:19 (1318963): run_atlas exited; CPU time 53137.230267
08:30:19 (1318963): called boinc_finish(0)

</stderr_txt>
]]>

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