Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:11:25 (9998): wrapper (7.7.26015): starting
19:11:25 (9998): wrapper: running run_atlas (--nthreads 8)
[2025-10-14 19:11:25] Arguments: --nthreads 8
[2025-10-14 19:11:25] Threads: 8
[2025-10-14 19:11:25] Checking for CVMFS
[2025-10-14 19:11:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 19:11:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 19:11:25] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 19:11:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 19:11:25] 2.11.2.0 3869 42117 132588 151713 2 1 9643722 18432000 1 130560 0 40752728 99.994 1368643 37876 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-14 19:11:25] CVMFS is ok
[2025-10-14 19:11:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 19:11:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 19:11:25] Further information can be found at the LHC@home message board.
[2025-10-14 19:11:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 19:11:25] Checking for apptainer binary...
[2025-10-14 19:11:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 19:11:25] Running /usr/bin/apptainer --version
[2025-10-14 19:11:25] apptainer version 1.3.2-1.el7
[2025-10-14 19:11:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 19:11:26] c-206-12.aglt2.org
[2025-10-14 19:11:26] apptainer works
[2025-10-14 19:11:26] Set ATHENA_PROC_NUMBER=8
[2025-10-14 19:11:26] Set ATHENA_CORE_NUMBER=8
[2025-10-14 19:11:26] Starting ATLAS job with PandaID=6840712898
[2025-10-14 19:11:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 20:58:55]  *** The last 200 lines of the pilot log: ***
[2025-10-14 20:58:55] 2025-10-15 00:58:05,108 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 20:58:55] 2025-10-15 00:58:05,108 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 20:58:55] 2025-10-15 00:58:05,108 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 20:58:55] 2025-10-15 00:58:05,110 | INFO     | fitting pss+swap vs Time
[2025-10-14 20:58:55] 2025-10-15 00:58:05,110 | INFO     | sum of square deviations: 358927660.0
[2025-10-14 20:58:55] 2025-10-15 00:58:05,111 | INFO     | sum of deviations: 5984106222.000001
[2025-10-14 20:58:55] 2025-10-15 00:58:05,111 | INFO     | mean x: 1760486702.0
[2025-10-14 20:58:55] 2025-10-15 00:58:05,111 | INFO     | mean y: 2462203.4476190475
[2025-10-14 20:58:55] 2025-10-15 00:58:05,111 | INFO     | -- intersect: -29348687349.045662
[2025-10-14 20:58:55] 2025-10-15 00:58:05,111 | INFO     | intersect: -29348687349.045662
[2025-10-14 20:58:55] 2025-10-15 00:58:05,111 | INFO     | chi2: 2.0745431592620007
[2025-10-14 20:58:55] 2025-10-15 00:58:05,112 | INFO     | sum of square deviations: 310052325.0
[2025-10-14 20:58:55] 2025-10-15 00:58:05,112 | INFO     | sum of deviations: 12371896383.499998
[2025-10-14 20:58:55] 2025-10-15 00:58:05,112 | INFO     | mean x: 1760486549.5
[2025-10-14 20:58:55] 2025-10-15 00:58:05,112 | INFO     | mean y: 2481300.79
[2025-10-14 20:58:55] 2025-10-15 00:58:05,113 | INFO     | -- intersect: -70245523370.54875
[2025-10-14 20:58:55] 2025-10-15 00:58:05,113 | INFO     | intersect: -70245523370.54875
[2025-10-14 20:58:55] 2025-10-15 00:58:05,113 | INFO     | chi2: 1.3091755332188608
[2025-10-14 20:58:55] 2025-10-15 00:58:05,113 | INFO     | current chi2=1.3091755332188608 (change=36.89330938361447 %)
[2025-10-14 20:58:55] 2025-10-15 00:58:05,113 | INFO     | sum of square deviations: 265828240.0
[2025-10-14 20:58:55] 2025-10-15 00:58:05,114 | INFO     | sum of deviations: 11691271285.0
[2025-10-14 20:58:55] 2025-10-15 00:58:05,114 | INFO     | mean x: 1760486397.0
[2025-10-14 20:58:55] 2025-10-15 00:58:05,114 | INFO     | mean y: 2478951.789473684
[2025-10-14 20:58:55] 2025-10-15 00:58:05,114 | INFO     | -- intersect: -77424674991.21977
[2025-10-14 20:58:55] 2025-10-15 00:58:05,114 | INFO     | intersect: -77424674991.21977
[2025-10-14 20:58:55] 2025-10-15 00:58:05,114 | INFO     | chi2: 1.3119579632329466
[2025-10-14 20:58:55] 2025-10-15 00:58:05,114 | INFO     | current chi2=1.3119579632329466 (change=-0.21253299832487654 %)
[2025-10-14 20:58:55] 2025-10-15 00:58:05,114 | INFO     | right removable region: 94
[2025-10-14 20:58:55] 2025-10-15 00:58:05,115 | INFO     | sum of square deviations: 310052325.0
[2025-10-14 20:58:55] 2025-10-15 00:58:05,115 | INFO     | sum of deviations: -6388170710.0
[2025-10-14 20:58:55] 2025-10-15 00:58:05,115 | INFO     | mean x: 1760486854.5
[2025-10-14 20:58:55] 2025-10-15 00:58:05,115 | INFO     | mean y: 2499621.84
[2025-10-14 20:58:55] 2025-10-15 00:58:05,115 | INFO     | -- intersect: 36274733862.48609
[2025-10-14 20:58:55] 2025-10-15 00:58:05,116 | INFO     | intersect: 36274733862.48609
[2025-10-14 20:58:55] 2025-10-15 00:58:05,116 | INFO     | chi2: 0.8191369768878052
[2025-10-14 20:58:55] 2025-10-15 00:58:05,116 | INFO     | current chi2=0.8191369768878052 (change=60.51482596393871 %)
[2025-10-14 20:58:55] 2025-10-15 00:58:05,116 | INFO     | sum of square deviations: 265828240.0
[2025-10-14 20:58:55] 2025-10-15 00:58:05,117 | INFO     | sum of deviations: -5012967312.0
[2025-10-14 20:58:55] 2025-10-15 00:58:05,117 | INFO     | mean x: 1760487007.0
[2025-10-14 20:58:55] 2025-10-15 00:58:05,117 | INFO     | mean y: 2495033.484210526
[2025-10-14 20:58:55] 2025-10-15 00:58:05,117 | INFO     | -- intersect: 33201615711.15079
[2025-10-14 20:58:55] 2025-10-15 00:58:05,117 | INFO     | intersect: 33201615711.15079
[2025-10-14 20:58:55] 2025-10-15 00:58:05,117 | INFO     | chi2: 0.8039368490367295
[2025-10-14 20:58:55] 2025-10-15 00:58:05,117 | INFO     | current chi2=0.8039368490367295 (change=1.855627114872344 %)
[2025-10-14 20:58:55] 2025-10-15 00:58:05,117 | INFO     | left removable region: 20
[2025-10-14 20:58:55] 2025-10-15 00:58:05,118 | INFO     | sum of square deviations: 125630262.5
[2025-10-14 20:58:55] 2025-10-15 00:58:05,118 | INFO     | sum of deviations: 587785630.0000001
[2025-10-14 20:58:55] 2025-10-15 00:58:05,118 | INFO     | mean x: 1760486976.5
[2025-10-14 20:58:55] 2025-10-15 00:58:05,118 | INFO     | mean y: 2520391.2702702703
[2025-10-14 20:58:55] 2025-10-15 00:58:05,118 | INFO     | -- intersect: -8234260508.465953
[2025-10-14 20:58:55] 2025-10-15 00:58:05,118 | INFO     | intersect: -8234260508.465953
[2025-10-14 20:58:55] 2025-10-15 00:58:05,119 | INFO     | chi2: 0.0001326091388318658
[2025-10-14 20:58:55] 2025-10-15 00:58:05,119 | INFO     | -- intersect: -8234260508.465953
[2025-10-14 20:58:55] 2025-10-15 00:58:05,119 | INFO     | current memory leak: 4.68 B/s (using 74 data points, chi2=0.00)
[2025-10-14 20:58:55] 2025-10-15 00:58:05,119 | INFO     | could have reported an average CPU frequency of 1869 MHz (7 samples)
[2025-10-14 20:58:55] 2025-10-15 00:58:05,119 | INFO     | ..............................
[2025-10-14 20:58:55] 2025-10-15 00:58:05,119 | INFO     | . Timing measurements:
[2025-10-14 20:58:55] 2025-10-15 00:58:05,120 | INFO     | . get job = 0 s
[2025-10-14 20:58:55] 2025-10-15 00:58:05,120 | INFO     | . initial setup = 2 s
[2025-10-14 20:58:55] 2025-10-15 00:58:05,120 | INFO     | . payload setup = 7 s
[2025-10-14 20:58:55] 2025-10-15 00:58:05,120 | INFO     | . stage-in = 0 s
[2025-10-14 20:58:55] 2025-10-15 00:58:05,120 | INFO     | . payload execution = 6350 s
[2025-10-14 20:58:55] 2025-10-15 00:58:05,120 | INFO     | . stage-out = 0 s
[2025-10-14 20:58:55] 2025-10-15 00:58:05,120 | INFO     | . log creation = 0 s
[2025-10-14 20:58:55] 2025-10-15 00:58:05,120 | INFO     | ..............................
[2025-10-14 20:58:55] 2025-10-15 00:58:05,203 | INFO     | 
[2025-10-14 20:58:55] 2025-10-15 00:58:05,204 | INFO     | job summary report
[2025-10-14 20:58:55] 2025-10-15 00:58:05,204 | INFO     | --------------------------------------------------
[2025-10-14 20:58:55] 2025-10-15 00:58:05,204 | INFO     | PanDA job id: 6840712898
[2025-10-14 20:58:55] 2025-10-15 00:58:05,204 | INFO     | task id: 46676269
[2025-10-14 20:58:55] 2025-10-15 00:58:05,204 | INFO     | errors: (none)
[2025-10-14 20:58:55] 2025-10-15 00:58:05,204 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 20:58:55] 2025-10-15 00:58:05,205 | INFO     | pilot state: finished 
[2025-10-14 20:58:55] 2025-10-15 00:58:05,205 | INFO     | transexitcode: 0
[2025-10-14 20:58:55] 2025-10-15 00:58:05,205 | INFO     | exeerrorcode: 0
[2025-10-14 20:58:55] 2025-10-15 00:58:05,205 | INFO     | exeerrordiag: 
[2025-10-14 20:58:55] 2025-10-15 00:58:05,205 | INFO     | exitcode: 0
[2025-10-14 20:58:55] 2025-10-15 00:58:05,206 | INFO     | exitmsg: OK
[2025-10-14 20:58:55] 2025-10-15 00:58:05,206 | INFO     | cpuconsumptiontime: 47367 s
[2025-10-14 20:58:55] 2025-10-15 00:58:05,206 | INFO     | nevents: 400
[2025-10-14 20:58:55] 2025-10-15 00:58:05,206 | INFO     | neventsw: 0
[2025-10-14 20:58:55] 2025-10-15 00:58:05,206 | INFO     | pid: 20122
[2025-10-14 20:58:55] 2025-10-15 00:58:05,206 | INFO     | pgrp: 20122
[2025-10-14 20:58:55] 2025-10-15 00:58:05,207 | INFO     | corecount: 8
[2025-10-14 20:58:55] 2025-10-15 00:58:05,207 | INFO     | event service: False
[2025-10-14 20:58:55] 2025-10-15 00:58:05,207 | INFO     | sizes: {0: 2348921, 1: 2348921, 5: 2349211, 11: 2349267, 6361: 2376293, 6362: 2385475, 6367: 2385613}
[2025-10-14 20:58:55] 2025-10-15 00:58:05,207 | INFO     | --------------------------------------------------
[2025-10-14 20:58:55] 2025-10-15 00:58:05,207 | INFO     | 
[2025-10-14 20:58:55] 2025-10-15 00:58:05,207 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-14 20:58:55] 2025-10-15 00:58:05,232 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 20:58:55] 2025-10-15 00:58:05,232 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 20:58:55] 2025-10-15 00:58:05,232 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 20:58:55] 2025-10-15 00:58:05,232 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 20:58:55] 2025-10-15 00:58:05,232 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 20:58:55] 2025-10-15 00:58:05,233 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 20:58:55] 2025-10-15 00:58:05,233 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 20:58:55] 2025-10-15 00:58:05,233 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 20:58:55] 2025-10-15 00:58:05,233 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 20:58:55] 2025-10-15 00:58:05,233 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 20:58:55] 2025-10-15 00:58:05,234 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 20:58:55] 2025-10-15 00:58:05,234 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 20:58:55] 2025-10-15 00:58:05,234 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 20:58:55] 2025-10-15 00:58:05,234 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 20:58:55] 2025-10-15 00:58:05,234 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 20:58:55] 2025-10-15 00:58:05,234 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 20:58:55] 2025-10-15 00:58:05,235 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 20:58:55] 2025-10-15 00:58:05,235 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 20:58:55] 2025-10-15 00:58:05,235 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 20:58:55] 2025-10-15 00:58:05,235 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 20:58:55] 2025-10-15 00:58:05,235 | INFO     | job 6840712898 has completed (purged errors)
[2025-10-14 20:58:55] 2025-10-15 00:58:05,236 | INFO     | overall cleanup function is called
[2025-10-14 20:58:55] 2025-10-15 00:58:06,243 | INFO     | --- collectZombieJob: --- 10, [20122]
[2025-10-14 20:58:55] 2025-10-15 00:58:06,244 | INFO     | zombie collector waiting for pid 20122
[2025-10-14 20:58:55] 2025-10-15 00:58:06,244 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 20:58:55] 2025-10-15 00:58:06,244 | INFO     | collected zombie processes
[2025-10-14 20:58:55] 2025-10-15 00:58:06,244 | INFO     | will attempt to kill all subprocesses of pid=20122
[2025-10-14 20:58:55] 2025-10-15 00:58:06,339 | INFO     | process IDs to be killed: [20122] (in reverse order)
[2025-10-14 20:58:55] 2025-10-15 00:58:06,394 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 20:58:55] 2025-10-15 00:58:06,395 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 20:58:55] 2025-10-15 00:58:06,398 | INFO     | did not find any defunct processes belonging to 20122
[2025-10-14 20:58:55] 2025-10-15 00:58:06,402 | INFO     | did not find any defunct processes belonging to 20122
[2025-10-14 20:58:55] 2025-10-15 00:58:06,402 | INFO     | ready for new job
[2025-10-14 20:58:55] 2025-10-15 00:58:06,402 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 20:58:55] 2025-10-15 00:58:06,404 | INFO     | ***************************************
[2025-10-14 20:58:55] 2025-10-15 00:58:06,404 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 20:58:55] 2025-10-15 00:58:06,404 | INFO     | ***************************************
[2025-10-14 20:58:55] 2025-10-15 00:58:06,404 | INFO     | 
[2025-10-14 20:58:55] 2025-10-15 00:58:06,405 | INFO     | architecture information:
[2025-10-14 20:58:55] 2025-10-15 00:58:06,405 | INFO     | executing command: cat /etc/os-release
[2025-10-14 20:58:55] 2025-10-15 00:58:06,420 | INFO     | cat /etc/os-release:
[2025-10-14 20:58:55] NAME="CentOS Linux"
[2025-10-14 20:58:55] VERSION="7 (Core)"
[2025-10-14 20:58:55] ID="centos"
[2025-10-14 20:58:55] ID_LIKE="rhel fedora"
[2025-10-14 20:58:55] VERSION_ID="7"
[2025-10-14 20:58:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 20:58:55] ANSI_COLOR="0;31"
[2025-10-14 20:58:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 20:58:55] HOME_URL="https://www.centos.org/"
[2025-10-14 20:58:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 20:58:55] 
[2025-10-14 20:58:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 20:58:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 20:58:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 20:58:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 20:58:55] 
[2025-10-14 20:58:55] 2025-10-15 00:58:06,420 | INFO     | ***************************************
[2025-10-14 20:58:55] 2025-10-15 00:58:06,923 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-14 20:58:55] 2025-10-15 00:58:06,940 | INFO     | sufficient remaining disk space (29253173248 B)
[2025-10-14 20:58:55] 2025-10-15 00:58:06,941 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 20:58:55] 2025-10-15 00:58:06,941 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 20:58:55] 2025-10-15 00:58:06,941 | INFO     | update_server=False
[2025-10-14 20:58:55] 2025-10-15 00:58:06,941 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 20:58:55] 2025-10-15 00:58:06,942 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 20:58:55] 2025-10-15 00:58:06,942 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 20:58:55] 2025-10-15 00:58:06,942 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 20:58:55] 2025-10-15 00:58:06,943 | INFO     | aborting loop
[2025-10-14 20:58:55] 2025-10-15 00:58:07,095 | INFO     | all job control threads have been joined
[2025-10-14 20:58:55] 2025-10-15 00:58:07,142 | INFO     | all data control threads have been joined
[2025-10-14 20:58:55] 2025-10-15 00:58:07,469 | INFO     | all payload control threads have been joined
[2025-10-14 20:58:55] 2025-10-15 00:58:07,944 | INFO     | [job] queue monitor thread has finished
[2025-10-14 20:58:55] 2025-10-15 00:58:07,947 | INFO     | [job] retrieve thread has finished
[2025-10-14 20:58:55] 2025-10-15 00:58:07,948 | INFO     | [job] job monitor thread has finished
[2025-10-14 20:58:55] 2025-10-15 00:58:08,101 | INFO     | [job] control thread has finished
[2025-10-14 20:58:55] 2025-10-15 00:58:08,148 | INFO     | [data] control thread has finished
[2025-10-14 20:58:55] 2025-10-15 00:58:08,148 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 20:58:55] 2025-10-15 00:58:08,475 | INFO     | [payload] control thread has finished
[2025-10-14 20:58:55] 2025-10-15 00:58:08,548 | INFO     | [job] validate thread has finished
[2025-10-14 20:58:55] 2025-10-15 00:58:08,686 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 20:58:55] 2025-10-15 00:58:08,690 | INFO     | [payload] failed_post thread has finished
[2025-10-14 20:58:55] 2025-10-15 00:58:08,833 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 20:58:55] 2025-10-15 00:58:08,989 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 20:58:55] 2025-10-15 00:58:09,364 | INFO     | [payload] validate_post thread has finished
[2025-10-14 20:58:55] 2025-10-15 00:58:09,441 | INFO     | [data] copytool_in thread has finished
[2025-10-14 20:58:55] 2025-10-15 00:58:10,154 | INFO     | [data] copytool_out thread has finished
[2025-10-14 20:58:55] 2025-10-15 00:58:10,948 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 20:58:55] 2025-10-15 00:58:17,004 | INFO     | job.realtimelogging is not enabled
[2025-10-14 20:58:55] 2025-10-15 00:58:18,009 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 20:58:55] 2025-10-15 00:58:37,904 | INFO     | PID=13701 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-14 20:58:55] 2025-10-15 00:58:37,904 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 20:58:55] 2025-10-15 00:58:37,905 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 20:58:55] 2025-10-15 00:58:37,905 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 20:58:55] 2025-10-15 00:58:49,370 | INFO     | [monitor] cgroup control has ended
[2025-10-14 20:58:55] 2025-10-15 00:58:50,597 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140415665948480)>', '<ExcThread(monitor, started 140414946367232)>']
[2025-10-14 20:58:55] 2025-10-15 00:58:50,968 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 20:58:55] 2025-10-15 00:58:50,968 | INFO     | [monitor] control thread has ended
[2025-10-14 20:58:55] 2025-10-15 00:58:55,619 | INFO     | all workflow threads have been joined
[2025-10-14 20:58:55] 2025-10-15 00:58:55,620 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 20:58:55] 2025-10-15 00:58:55,620 | INFO     | traces error code: 0
[2025-10-14 20:58:55] 2025-10-15 00:58:55,620 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 20:58:55] 2025-10-15 00:58:55,704 [wrapper] ==== pilot stdout END ====
[2025-10-14 20:58:55] 2025-10-15 00:58:55,708 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 20:58:55] 2025-10-15 00:58:55,712 [wrapper] pilotpid: 13701
[2025-10-14 20:58:55] 2025-10-15 00:58:55,716 [wrapper] Pilot exit status: 0
[2025-10-14 20:58:55] 2025-10-15 00:58:55,730 [wrapper] pandaids: 6840712898
[2025-10-14 20:58:55] 2025-10-15 00:58:55,769 [wrapper] cleanup supervisor_pilot 10972 13702
[2025-10-14 20:58:55] 2025-10-15 00:58:55,773 [wrapper] Test setup, not cleaning
[2025-10-14 20:58:55] 2025-10-15 00:58:55,776 [wrapper] apfmon messages muted
[2025-10-14 20:58:55] 2025-10-15 00:58:55,780 [wrapper] ==== wrapper stdout END ====
[2025-10-14 20:58:55] 2025-10-15 00:58:55,783 [wrapper] ==== wrapper stderr END ====
[2025-10-14 20:58:55]  *** Error codes and diagnostics ***
[2025-10-14 20:58:55]     "exeErrorCode": 0,
[2025-10-14 20:58:55]     "exeErrorDiag": "",
[2025-10-14 20:58:55]     "pilotErrorCode": 0,
[2025-10-14 20:58:55]     "pilotErrorDiag": "",
[2025-10-14 20:58:55]  *** Listing of results directory ***
[2025-10-14 20:58:55] total 409156
[2025-10-14 20:58:55] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 14:53 pilot3.tar.gz
[2025-10-14 20:58:55] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 15:25 queuedata.json
[2025-10-14 20:58:55] -rwx------ 1 boincer umatlas     36292 Oct 12 15:26 runpilot2-wrapper.sh
[2025-10-14 20:58:55] -rw-r--r-- 1 boincer umatlas       100 Oct 14 19:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 20:58:55] -rwxr-xr-x 1 boincer umatlas      7986 Oct 14 19:11 run_atlas
[2025-10-14 20:58:55] -rw-r--r-- 1 boincer umatlas       105 Oct 14 19:11 job.xml
[2025-10-14 20:58:55] -rw-r--r-- 2 boincer umatlas 220209284 Oct 14 19:11 EVNT.46676267._004451.pool.root.1
[2025-10-14 20:58:55] -rw-r--r-- 2 boincer umatlas     15120 Oct 14 19:11 start_atlas.sh
[2025-10-14 20:58:55] drwxrwx--x 2 boincer umatlas      4096 Oct 14 19:11 shared
[2025-10-14 20:58:55] -rw-r--r-- 2 boincer umatlas    569688 Oct 14 19:11 input.tar.gz
[2025-10-14 20:58:55] -rw-r--r-- 1 boincer umatlas         0 Oct 14 19:11 boinc_lockfile
[2025-10-14 20:58:55] -rw-r--r-- 1 boincer umatlas      2550 Oct 14 19:11 pandaJob.out
[2025-10-14 20:58:55] -rw------- 1 boincer umatlas    974007 Oct 14 19:11 agis_schedconf.cvmfs.json
[2025-10-14 20:58:55] -rw------- 1 boincer umatlas   1560740 Oct 14 19:11 agis_ddmendpoints.agis.ALL.json
[2025-10-14 20:58:55] drwx------ 5 boincer umatlas      4096 Oct 14 19:11 pilot3
[2025-10-14 20:58:55] -rw-r--r-- 1 boincer umatlas      5951 Oct 14 20:56 init_data.xml
[2025-10-14 20:58:55] -rw-r--r-- 1 boincer umatlas       529 Oct 14 20:57 boinc_task_state.xml
[2025-10-14 20:58:55] -rw------- 1 boincer umatlas 192344871 Oct 14 20:57 HITS.46676269._087411.pool.root.1
[2025-10-14 20:58:55] -rw------- 1 boincer umatlas      1046 Oct 14 20:57 memory_monitor_summary.json
[2025-10-14 20:58:55] -rw------- 1 boincer umatlas    342792 Oct 14 20:57 log.46676269._087411.job.log.tgz.1
[2025-10-14 20:58:55] -rw------- 1 boincer umatlas      7844 Oct 14 20:58 heartbeat.json
[2025-10-14 20:58:55] -rw-r--r-- 1 boincer umatlas      8192 Oct 14 20:58 boinc_mmap_file
[2025-10-14 20:58:55] -rw-r--r-- 1 boincer umatlas        27 Oct 14 20:58 wrapper_checkpoint.txt
[2025-10-14 20:58:55] -rw------- 1 boincer umatlas        95 Oct 14 20:58 pilot_heartbeat.json
[2025-10-14 20:58:55] -rw------- 1 boincer umatlas      4818 Oct 14 20:58 pilotlog.txt
[2025-10-14 20:58:55] -rw------- 1 boincer umatlas    915933 Oct 14 20:58 log.46676269._087411.job.log.1
[2025-10-14 20:58:55] -rw------- 1 boincer umatlas       357 Oct 14 20:58 output.list
[2025-10-14 20:58:55] -rw-r--r-- 1 boincer umatlas       620 Oct 14 20:58 runtime_log
[2025-10-14 20:58:55] -rw------- 1 boincer umatlas   1280000 Oct 14 20:58 result.tar.gz
[2025-10-14 20:58:55] -rw-r--r-- 1 boincer umatlas      8703 Oct 14 20:58 runtime_log.err
[2025-10-14 20:58:55] -rw------- 1 boincer umatlas       658 Oct 14 20:58 4KKODmpsGS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmAoUMDmIXWeXn.diag
[2025-10-14 20:58:55] -rw-r--r-- 1 boincer umatlas     20817 Oct 14 20:58 stderr.txt
[2025-10-14 20:58:55] HITS file was successfully produced:
[2025-10-14 20:58:55] -rw------- 1 boincer umatlas 192344871 Oct 14 20:57 shared/HITS.pool.root.1
[2025-10-14 20:58:55]  *** Contents of shared directory: ***
[2025-10-14 20:58:55] total 404724
[2025-10-14 20:58:55] -rw-r--r-- 2 boincer umatlas 220209284 Oct 14 19:11 ATLAS.root_0
[2025-10-14 20:58:55] -rw-r--r-- 2 boincer umatlas     15120 Oct 14 19:11 start_atlas.sh
[2025-10-14 20:58:55] -rw-r--r-- 2 boincer umatlas    569688 Oct 14 19:11 input.tar.gz
[2025-10-14 20:58:55] -rw------- 1 boincer umatlas 192344871 Oct 14 20:57 HITS.pool.root.1
[2025-10-14 20:58:55] -rw------- 1 boincer umatlas   1280000 Oct 14 20:58 result.tar.gz
20:58:57 (9998): run_atlas exited; CPU time 47247.866124
20:58:57 (9998): called boinc_finish(0)

</stderr_txt>
]]>

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