Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:40:00 (2762715): wrapper (7.7.26015): starting
18:40:00 (2762715): wrapper: running run_atlas (--nthreads 11)
[2025-10-14 18:40:00] Arguments: --nthreads 11
[2025-10-14 18:40:00] Threads: 11
[2025-10-14 18:40:00] Checking for CVMFS
[2025-10-14 18:40:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 18:40:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 18:40:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 18:40:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 18:40:00] 2.13.2.0 5068 9171 133920 151713 2 402 25572696 40960000 20787 16776704 0 31691747 99.729 22186505 35214 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-14 18:40:00] CVMFS is ok
[2025-10-14 18:40:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 18:40:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 18:40:00] Further information can be found at the LHC@home message board.
[2025-10-14 18:40:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 18:40:00] Checking for apptainer binary...
[2025-10-14 18:40:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 18:40:00] Running /usr/bin/apptainer --version
[2025-10-14 18:40:00] apptainer version 1.4.3-1.el9
[2025-10-14 18:40:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 18:40:00] c-212-15.aglt2.org
[2025-10-14 18:40:00] apptainer works
[2025-10-14 18:40:00] Set ATHENA_PROC_NUMBER=11
[2025-10-14 18:40:00] Set ATHENA_CORE_NUMBER=11
[2025-10-14 18:40:00] Starting ATLAS job with PandaID=6832862877
[2025-10-14 18:40:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 20:01:30]  *** The last 200 lines of the pilot log: ***
[2025-10-14 20:01:30]  status=None
[2025-10-14 20:01:30]  status_code=0
[2025-10-14 20:01:30]  storage_token=
[2025-10-14 20:01:30]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6832862877/log.46376905._116917.job.log.tgz.1
[2025-10-14 20:01:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/97/52/log.46376905._116917.job.log.tgz.1
[2025-10-14 20:01:30]  workdir=None
[2025-10-14 20:01:30] ]
[2025-10-14 20:01:30] 2025-10-15 00:00:50,292 | INFO     | transferring file log.46376905._116917.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6832862877/log.46376905._116917.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-14 20:01:30] 2025-10-15 00:00:50,292 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6832862877/log.46376905._116917.job.log.tgz.1 /tmp/boinchome/slots/1/log.46376905._116917.job
[2025-10-14 20:01:30] 2025-10-15 00:00:50,318 | INFO     | adding to output.list: log.46376905._116917.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/97/52/log.46376905._116917.job.log.tg
[2025-10-14 20:01:30] 2025-10-15 00:00:50,319 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-14 20:01:30] 2025-10-15 00:00:50,320 | INFO     | summary of transferred files:
[2025-10-14 20:01:30] 2025-10-15 00:00:50,320 | INFO     |  -- lfn=log.46376905._116917.job.log.tgz.1, status_code=0, status=transferred
[2025-10-14 20:01:30] 2025-10-15 00:00:50,320 | INFO     | stage-out finished correctly
[2025-10-14 20:01:30] 2025-10-15 00:00:51,693 | INFO     | time since job start (4838s) is within the limit (172800.0s)
[2025-10-14 20:01:30] 2025-10-15 00:00:52,243 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-14 20:01:30] 2025-10-15 00:00:52,325 | INFO     | job 6832862877 has state=finished
[2025-10-14 20:01:30] 2025-10-15 00:00:52,326 | INFO     | preparing for final server update for job 6832862877 in state='finished'
[2025-10-14 20:01:30] 2025-10-15 00:00:52,327 | INFO     | this job has now completed (state=finished)
[2025-10-14 20:01:30] 2025-10-15 00:00:52,327 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-14 20:01:30] 2025-10-15 00:00:52,328 | INFO     | log transfer has been attempted: DONE
[2025-10-14 20:01:30] 2025-10-15 00:00:52,328 | INFO     | job 6832862877 has finished - writing final server update
[2025-10-14 20:01:30] 2025-10-15 00:00:52,328 | INFO     | total number of processed events: 400 (read)
[2025-10-14 20:01:30] 2025-10-15 00:00:52,330 | INFO     | executing command: lscpu
[2025-10-14 20:01:30] 2025-10-15 00:00:52,411 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-14 20:01:30] 2025-10-15 00:00:52,676 | WARNING  | process 2796136 can no longer be monitored (due to stat problems) - aborting
[2025-10-14 20:01:30] 2025-10-15 00:00:52,676 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6832862877/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 20:01:30] 2025-10-15 00:00:53,065 | INFO     | number of running child processes to parent process 2796136: 1
[2025-10-14 20:01:30] 2025-10-15 00:00:53,065 | INFO     | maximum number of monitored processes: 6
[2025-10-14 20:01:30] 2025-10-15 00:00:53,699 | INFO     | time since job start (4840s) is within the limit (172800.0s)
[2025-10-14 20:01:30] 2025-10-15 00:00:55,224 | INFO     | PID=2772289 has CPU usage=14.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-14 20:01:30] 2025-10-15 00:00:55,225 | INFO     | .. there are 20 such processes running
[2025-10-14 20:01:30] 2025-10-15 00:00:55,569 | INFO     | monitor loop #331: job 0:6832862877 is in state 'finished'
[2025-10-14 20:01:30] 2025-10-15 00:00:55,569 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 20:01:30] 2025-10-15 00:00:56,227 | INFO     | time since job start (4843s) is within the limit (172800.0s)
[2025-10-14 20:01:30] 2025-10-15 00:00:56,491 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 20:01:30] 2025-10-15 00:00:56,528 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3029.151614583334
[2025-10-14 20:01:30] 2025-10-15 00:00:56,537 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6832862877/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 20:01:30] 2025-10-15 00:00:56,538 | INFO     | extracted standard info from prmon json
[2025-10-14 20:01:30] 2025-10-15 00:00:56,538 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 20:01:30] 2025-10-15 00:00:56,538 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 20:01:30] 2025-10-15 00:00:56,538 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 20:01:30] 2025-10-15 00:00:56,538 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 20:01:30] 2025-10-15 00:00:56,539 | INFO     | fitting pss+swap vs Time
[2025-10-14 20:01:30] 2025-10-15 00:00:56,539 | INFO     | sum of square deviations: 115715415.94444431
[2025-10-14 20:01:30] 2025-10-15 00:00:56,540 | INFO     | sum of deviations: -4235653915.8055563
[2025-10-14 20:01:30] 2025-10-15 00:00:56,540 | INFO     | mean x: 1760484111.5277777
[2025-10-14 20:01:30] 2025-10-15 00:00:56,540 | INFO     | mean y: 2676449.652777778
[2025-10-14 20:01:30] 2025-10-15 00:00:56,540 | INFO     | -- intersect: 64443540787.7817
[2025-10-14 20:01:30] 2025-10-15 00:00:56,540 | INFO     | intersect: 64443540787.7817
[2025-10-14 20:01:30] 2025-10-15 00:00:56,540 | INFO     | chi2: 0.014402200280061133
[2025-10-14 20:01:30] 2025-10-15 00:00:56,540 | INFO     | -- intersect: 64443540787.7817
[2025-10-14 20:01:30] 2025-10-15 00:00:56,540 | INFO     | current memory leak: -36.60 B/s (using 72 data points, chi2=0.01)
[2025-10-14 20:01:30] 2025-10-15 00:00:56,540 | INFO     | could have reported an average CPU frequency of 3152 MHz (6 samples)
[2025-10-14 20:01:30] 2025-10-15 00:00:56,540 | INFO     | ..............................
[2025-10-14 20:01:30] 2025-10-15 00:00:56,540 | INFO     | . Timing measurements:
[2025-10-14 20:01:30] 2025-10-15 00:00:56,540 | INFO     | . get job = 0 s
[2025-10-14 20:01:30] 2025-10-15 00:00:56,540 | INFO     | . initial setup = 2 s
[2025-10-14 20:01:30] 2025-10-15 00:00:56,540 | INFO     | . payload setup = 5 s
[2025-10-14 20:01:30] 2025-10-15 00:00:56,541 | INFO     | . stage-in = 0 s
[2025-10-14 20:01:30] 2025-10-15 00:00:56,541 | INFO     | . payload execution = 4809 s
[2025-10-14 20:01:30] 2025-10-15 00:00:56,541 | INFO     | . stage-out = 1 s
[2025-10-14 20:01:30] 2025-10-15 00:00:56,541 | INFO     | . log creation = 0 s
[2025-10-14 20:01:30] 2025-10-15 00:00:56,541 | INFO     | ..............................
[2025-10-14 20:01:30] 2025-10-15 00:00:56,649 | INFO     | 
[2025-10-14 20:01:30] 2025-10-15 00:00:56,649 | INFO     | job summary report
[2025-10-14 20:01:30] 2025-10-15 00:00:56,649 | INFO     | --------------------------------------------------
[2025-10-14 20:01:30] 2025-10-15 00:00:56,649 | INFO     | PanDA job id: 6832862877
[2025-10-14 20:01:30] 2025-10-15 00:00:56,649 | INFO     | task id: 46376905
[2025-10-14 20:01:30] 2025-10-15 00:00:56,649 | INFO     | errors: (none)
[2025-10-14 20:01:30] 2025-10-15 00:00:56,649 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 20:01:30] 2025-10-15 00:00:56,650 | INFO     | pilot state: finished 
[2025-10-14 20:01:30] 2025-10-15 00:00:56,650 | INFO     | transexitcode: 0
[2025-10-14 20:01:30] 2025-10-15 00:00:56,650 | INFO     | exeerrorcode: 0
[2025-10-14 20:01:30] 2025-10-15 00:00:56,650 | INFO     | exeerrordiag: 
[2025-10-14 20:01:30] 2025-10-15 00:00:56,650 | INFO     | exitcode: 0
[2025-10-14 20:01:30] 2025-10-15 00:00:56,650 | INFO     | exitmsg: OK
[2025-10-14 20:01:30] 2025-10-15 00:00:56,650 | INFO     | cpuconsumptiontime: 31172 s
[2025-10-14 20:01:30] 2025-10-15 00:00:56,650 | INFO     | nevents: 400
[2025-10-14 20:01:30] 2025-10-15 00:00:56,650 | INFO     | neventsw: 0
[2025-10-14 20:01:30] 2025-10-15 00:00:56,650 | INFO     | pid: 2796136
[2025-10-14 20:01:30] 2025-10-15 00:00:56,650 | INFO     | pgrp: 2796136
[2025-10-14 20:01:30] 2025-10-15 00:00:56,650 | INFO     | corecount: 11
[2025-10-14 20:01:30] 2025-10-15 00:00:56,650 | INFO     | event service: False
[2025-10-14 20:01:30] 2025-10-15 00:00:56,650 | INFO     | sizes: {0: 2348713, 1: 2348912, 6: 2349174, 11: 2349202, 4819: 2375569, 4821: 2384567, 4823: 2384751, 4828: 2384945}
[2025-10-14 20:01:30] 2025-10-15 00:00:56,650 | INFO     | --------------------------------------------------
[2025-10-14 20:01:30] 2025-10-15 00:00:56,651 | INFO     | 
[2025-10-14 20:01:30] 2025-10-15 00:00:56,651 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-14 20:01:30] 2025-10-15 00:00:56,675 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 20:01:30] 2025-10-15 00:00:56,676 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 20:01:30] 2025-10-15 00:00:56,676 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 20:01:30] 2025-10-15 00:00:56,676 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 20:01:30] 2025-10-15 00:00:56,676 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 20:01:30] 2025-10-15 00:00:56,676 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 20:01:30] 2025-10-15 00:00:56,676 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 20:01:30] 2025-10-15 00:00:56,676 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 20:01:30] 2025-10-15 00:00:56,676 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 20:01:30] 2025-10-15 00:00:56,676 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 20:01:30] 2025-10-15 00:00:56,676 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 20:01:30] 2025-10-15 00:00:56,677 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 20:01:30] 2025-10-15 00:00:56,677 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 20:01:30] 2025-10-15 00:00:56,677 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 20:01:30] 2025-10-15 00:00:56,677 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 20:01:30] 2025-10-15 00:00:56,677 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 20:01:30] 2025-10-15 00:00:56,677 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 20:01:30] 2025-10-15 00:00:56,677 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 20:01:30] 2025-10-15 00:00:56,677 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 20:01:30] 2025-10-15 00:00:56,677 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 20:01:30] 2025-10-15 00:00:56,677 | INFO     | job 6832862877 has completed (purged errors)
[2025-10-14 20:01:30] 2025-10-15 00:00:56,677 | INFO     | overall cleanup function is called
[2025-10-14 20:01:30] 2025-10-15 00:00:57,686 | INFO     | --- collectZombieJob: --- 10, [2796136]
[2025-10-14 20:01:30] 2025-10-15 00:00:57,688 | INFO     | zombie collector waiting for pid 2796136
[2025-10-14 20:01:30] 2025-10-15 00:00:57,689 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 20:01:30] 2025-10-15 00:00:57,689 | INFO     | collected zombie processes
[2025-10-14 20:01:30] 2025-10-15 00:00:57,689 | INFO     | will attempt to kill all subprocesses of pid=2796136
[2025-10-14 20:01:30] 2025-10-15 00:00:58,091 | INFO     | process IDs to be killed: [2796136] (in reverse order)
[2025-10-14 20:01:30] 2025-10-15 00:00:58,214 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 20:01:30] 2025-10-15 00:00:58,215 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 20:01:30] 2025-10-15 00:00:58,232 | INFO     | did not find any defunct processes belonging to 2796136
[2025-10-14 20:01:30] 2025-10-15 00:00:58,249 | INFO     | did not find any defunct processes belonging to 2796136
[2025-10-14 20:01:30] 2025-10-15 00:00:58,250 | INFO     | ready for new job
[2025-10-14 20:01:30] 2025-10-15 00:00:58,250 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 20:01:30] 2025-10-15 00:00:58,255 | INFO     | ***************************************
[2025-10-14 20:01:30] 2025-10-15 00:00:58,255 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-14 20:01:30] 2025-10-15 00:00:58,255 | INFO     | ***************************************
[2025-10-14 20:01:30] 2025-10-15 00:00:58,255 | INFO     | 
[2025-10-14 20:01:30] 2025-10-15 00:00:58,262 | INFO     | architecture information:
[2025-10-14 20:01:30] 2025-10-15 00:00:58,263 | INFO     | executing command: cat /etc/os-release
[2025-10-14 20:01:30] 2025-10-15 00:00:58,284 | INFO     | cat /etc/os-release:
[2025-10-14 20:01:30] NAME="CentOS Linux"
[2025-10-14 20:01:30] VERSION="7 (Core)"
[2025-10-14 20:01:30] ID="centos"
[2025-10-14 20:01:30] ID_LIKE="rhel fedora"
[2025-10-14 20:01:30] VERSION_ID="7"
[2025-10-14 20:01:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 20:01:30] ANSI_COLOR="0;31"
[2025-10-14 20:01:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 20:01:30] HOME_URL="https://www.centos.org/"
[2025-10-14 20:01:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 20:01:30] 
[2025-10-14 20:01:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 20:01:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 20:01:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 20:01:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 20:01:30] 
[2025-10-14 20:01:30] 2025-10-15 00:00:58,284 | INFO     | ***************************************
[2025-10-14 20:01:30] 2025-10-15 00:00:58,787 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-14 20:01:30] 2025-10-15 00:00:58,802 | INFO     | sufficient remaining disk space (129326120960 B)
[2025-10-14 20:01:30] 2025-10-15 00:00:58,802 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 20:01:30] 2025-10-15 00:00:58,802 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 20:01:30] 2025-10-15 00:00:58,802 | INFO     | update_server=False
[2025-10-14 20:01:30] 2025-10-15 00:00:58,802 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 20:01:30] 2025-10-15 00:00:58,803 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 20:01:30] 2025-10-15 00:00:58,803 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 20:01:30] 2025-10-15 00:00:58,872 | INFO     | all job control threads have been joined
[2025-10-14 20:01:30] 2025-10-15 00:00:59,098 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 20:01:30] 2025-10-15 00:00:59,098 | INFO     | aborting loop
[2025-10-14 20:01:30] 2025-10-15 00:00:59,109 | INFO     | all data control threads have been joined
[2025-10-14 20:01:30] 2025-10-15 00:00:59,327 | INFO     | all payload control threads have been joined
[2025-10-14 20:01:30] 2025-10-15 00:00:59,808 | INFO     | [job] retrieve thread has finished
[2025-10-14 20:01:30] 2025-10-15 00:00:59,878 | INFO     | [job] control thread has finished
[2025-10-14 20:01:30] 2025-10-15 00:00:59,884 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 20:01:30] 2025-10-15 00:01:00,103 | INFO     | [job] job monitor thread has finished
[2025-10-14 20:01:30] 2025-10-15 00:01:00,114 | INFO     | [data] control thread has finished
[2025-10-14 20:01:30] 2025-10-15 00:01:00,263 | INFO     | [job] validate thread has finished
[2025-10-14 20:01:30] 2025-10-15 00:01:00,292 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 20:01:30] 2025-10-15 00:01:00,332 | INFO     | [payload] control thread has finished
[2025-10-14 20:01:30] 2025-10-15 00:01:00,529 | INFO     | [payload] validate_post thread has finished
[2025-10-14 20:01:30] 2025-10-15 00:01:00,809 | INFO     | [data] copytool_out thread has finished
[2025-10-14 20:01:30] 2025-10-15 00:01:00,824 | INFO     | [data] copytool_in thread has finished
[2025-10-14 20:01:30] 2025-10-15 00:01:00,879 | INFO     | [payload] failed_post thread has finished
[2025-10-14 20:01:30] 2025-10-15 00:01:01,281 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 20:01:30] 2025-10-15 00:01:01,660 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 20:01:30] 2025-10-15 00:01:02,666 | INFO     | [job] queue monitor thread has finished
[2025-10-14 20:01:30] 2025-10-15 00:01:02,816 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 20:01:30] 2025-10-15 00:01:08,915 | INFO     | job.realtimelogging is not enabled
[2025-10-14 20:01:30] 2025-10-15 00:01:09,920 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 20:01:30] 2025-10-15 00:01:20,637 | INFO     | [monitor] cgroup control has ended
[2025-10-14 20:01:30] 2025-10-15 00:01:21,193 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139719742408512)>', '<ExcThread(monitor, started 139719461537536)>']
[2025-10-14 20:01:30] 2025-10-15 00:01:26,218 | INFO     | all workflow threads have been joined
[2025-10-14 20:01:30] 2025-10-15 00:01:26,219 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 20:01:30] 2025-10-15 00:01:26,220 | INFO     | traces error code: 0
[2025-10-14 20:01:30] 2025-10-15 00:01:26,220 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 20:01:30] 2025-10-15 00:01:29,825 | INFO     | PID=2772289 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 20:01:30] 2025-10-15 00:01:29,825 | INFO     | .. there are 20 such processes running
[2025-10-14 20:01:30] 2025-10-15 00:01:29,825 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 20:01:30] 2025-10-15 00:01:29,825 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 20:01:30] 2025-10-15 00:01:29,825 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 20:01:30] 2025-10-15 00:01:29,826 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 20:01:30] 2025-10-15 00:01:29,826 | INFO     | [monitor] control thread has ended
[2025-10-14 20:01:30] 2025-10-15 00:01:30,037 [wrapper] ==== pilot stdout END ====
[2025-10-14 20:01:30] 2025-10-15 00:01:30,040 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 20:01:30] 2025-10-15 00:01:30,043 [wrapper] pilotpid: 2772289
[2025-10-14 20:01:30] 2025-10-15 00:01:30,046 [wrapper] Pilot exit status: 0
[2025-10-14 20:01:30] 2025-10-15 00:01:30,056 [wrapper] pandaids: 6832862877
[2025-10-14 20:01:30] 2025-10-15 00:01:30,151 [wrapper] cleanup supervisor_pilot 3112686 2772290
[2025-10-14 20:01:30] 2025-10-15 00:01:30,154 [wrapper] Test setup, not cleaning
[2025-10-14 20:01:30] 2025-10-15 00:01:30,156 [wrapper] apfmon messages muted
[2025-10-14 20:01:30] 2025-10-15 00:01:30,160 [wrapper] ==== wrapper stdout END ====
[2025-10-14 20:01:30] 2025-10-15 00:01:30,163 [wrapper] ==== wrapper stderr END ====
[2025-10-14 20:01:30]  *** Error codes and diagnostics ***
[2025-10-14 20:01:30]     "exeErrorCode": 0,
[2025-10-14 20:01:30]     "exeErrorDiag": "",
[2025-10-14 20:01:30]     "pilotErrorCode": 0,
[2025-10-14 20:01:30]     "pilotErrorDiag": "",
[2025-10-14 20:01:30]  *** Listing of results directory ***
[2025-10-14 20:01:30] total 394196
[2025-10-14 20:01:30] -rw-r--r--. 1 boincer umatlas    552446 Oct  6 14:52 pilot3.tar.gz
[2025-10-14 20:01:30] -rwx------. 1 boincer umatlas     36292 Oct  6 15:00 runpilot2-wrapper.sh
[2025-10-14 20:01:30] -rw-r--r--. 1 boincer umatlas      5112 Oct  6 15:00 queuedata.json
[2025-10-14 20:01:30] -rw-r--r--. 1 boincer umatlas       100 Oct 14 18:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 20:01:30] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 14 18:39 run_atlas
[2025-10-14 20:01:30] -rw-r--r--. 1 boincer umatlas       105 Oct 14 18:39 job.xml
[2025-10-14 20:01:30] -rw-r--r--. 2 boincer umatlas 215680936 Oct 14 18:40 EVNT.46376901._004339.pool.root.1
[2025-10-14 20:01:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 18:40 start_atlas.sh
[2025-10-14 20:01:30] drwxrwx--x. 2 boincer umatlas      4096 Oct 14 18:40 shared
[2025-10-14 20:01:30] -rw-r--r--. 2 boincer umatlas    565599 Oct 14 18:40 input.tar.gz
[2025-10-14 20:01:30] -rw-r--r--. 1 boincer umatlas         0 Oct 14 18:40 boinc_lockfile
[2025-10-14 20:01:30] -rw-r--r--. 1 boincer umatlas      2521 Oct 14 18:40 pandaJob.out
[2025-10-14 20:01:30] -rw-------. 1 boincer umatlas    974007 Oct 14 18:40 agis_schedconf.cvmfs.json
[2025-10-14 20:01:30] -rw-------. 1 boincer umatlas   1560740 Oct 14 18:40 agis_ddmendpoints.agis.ALL.json
[2025-10-14 20:01:30] drwx------. 4 boincer umatlas      4096 Oct 14 18:40 pilot3
[2025-10-14 20:01:30] -rw-r--r--. 1 boincer umatlas      6946 Oct 14 19:57 init_data.xml
[2025-10-14 20:01:30] -rw-------. 1 boincer umatlas 181955499 Oct 14 20:00 HITS.46376905._116917.pool.root.1
[2025-10-14 20:01:30] -rw-r--r--. 1 boincer umatlas       529 Oct 14 20:00 boinc_task_state.xml
[2025-10-14 20:01:30] -rw-------. 1 boincer umatlas      1036 Oct 14 20:00 memory_monitor_summary.json
[2025-10-14 20:01:30] -rw-------. 1 boincer umatlas        95 Oct 14 20:00 pilot_heartbeat.json
[2025-10-14 20:01:30] -rw-------. 1 boincer umatlas    384417 Oct 14 20:00 log.46376905._116917.job.log.tgz.1
[2025-10-14 20:01:30] -rw-------. 1 boincer umatlas      7782 Oct 14 20:00 heartbeat.json
[2025-10-14 20:01:30] -rw-r--r--. 1 boincer umatlas      8192 Oct 14 20:01 boinc_mmap_file
[2025-10-14 20:01:30] -rw-r--r--. 1 boincer umatlas        27 Oct 14 20:01 wrapper_checkpoint.txt
[2025-10-14 20:01:30] -rw-------. 1 boincer umatlas       823 Oct 14 20:01 pilotlog.txt
[2025-10-14 20:01:30] -rw-------. 1 boincer umatlas    686201 Oct 14 20:01 log.46376905._116917.job.log.1
[2025-10-14 20:01:30] -rw-------. 1 boincer umatlas       357 Oct 14 20:01 output.list
[2025-10-14 20:01:30] -rw-r--r--. 1 boincer umatlas       620 Oct 14 20:01 runtime_log
[2025-10-14 20:01:30] -rw-------. 1 boincer umatlas   1085440 Oct 14 20:01 result.tar.gz
[2025-10-14 20:01:30] -rw-------. 1 boincer umatlas       655 Oct 14 20:01 YXsMDmAd5P8n9Rq4apOajLDm4fhM0noT9bVof3QYDmZoJMDmkZnGhm.diag
[2025-10-14 20:01:30] -rw-r--r--. 1 boincer umatlas      8705 Oct 14 20:01 runtime_log.err
[2025-10-14 20:01:30] -rw-r--r--. 1 boincer umatlas     22103 Oct 14 20:01 stderr.txt
[2025-10-14 20:01:30] HITS file was successfully produced:
[2025-10-14 20:01:30] -rw-------. 1 boincer umatlas 181955499 Oct 14 20:00 shared/HITS.pool.root.1
[2025-10-14 20:01:30]  *** Contents of shared directory: ***
[2025-10-14 20:01:30] total 389960
[2025-10-14 20:01:30] -rw-r--r--. 2 boincer umatlas 215680936 Oct 14 18:40 ATLAS.root_0
[2025-10-14 20:01:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 18:40 start_atlas.sh
[2025-10-14 20:01:30] -rw-r--r--. 2 boincer umatlas    565599 Oct 14 18:40 input.tar.gz
[2025-10-14 20:01:30] -rw-------. 1 boincer umatlas 181955499 Oct 14 20:00 HITS.pool.root.1
[2025-10-14 20:01:30] -rw-------. 1 boincer umatlas   1085440 Oct 14 20:01 result.tar.gz
20:01:31 (2762715): run_atlas exited; CPU time 31280.928289
20:01:31 (2762715): called boinc_finish(0)

</stderr_txt>
]]>

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