Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:22:45 (3550905): wrapper (7.7.26015): starting
01:22:45 (3550905): wrapper: running run_atlas (--nthreads 4)
[2025-10-15 01:22:45] Arguments: --nthreads 4
[2025-10-15 01:22:45] Threads: 4
[2025-10-15 01:22:45] Checking for CVMFS
[2025-10-15 01:22:45] No cvmfs_config command found, will try listing directly
[2025-10-15 01:22:45] CVMFS is ok
[2025-10-15 01:22:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-15 01:22:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-15 01:22:45] Further information can be found at the LHC@home message board.
[2025-10-15 01:22:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-15 01:22:45] Checking for apptainer binary...
[2025-10-15 01:22:45] which: no apptainer in ((null))
[2025-10-15 01:22:45] apptainer is not installed, using version from CVMFS
[2025-10-15 01:22:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-15 01:22:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-10-15 01:22:45] apptainer works
[2025-10-15 01:22:46] Set ATHENA_PROC_NUMBER=4
[2025-10-15 01:22:46] Set ATHENA_CORE_NUMBER=4
[2025-10-15 01:22:46] Starting ATLAS job with PandaID=6844827887
[2025-10-15 01:22:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-15 04:55:13]  *** The last 200 lines of the pilot log: ***
[2025-10-15 04:55:13] 2025-10-15 02:12:40,436 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-15 04:55:13] 2025-10-15 02:12:40,436 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-15 04:55:13] 2025-10-15 02:12:40,438 | INFO     | fitting pss+swap vs Time
[2025-10-15 04:55:13] 2025-10-15 02:12:40,438 | INFO     | sum of square deviations: 1444149868.0
[2025-10-15 04:55:13] 2025-10-15 02:12:40,439 | INFO     | sum of deviations: -35606241558.0
[2025-10-15 04:55:13] 2025-10-15 02:12:40,439 | INFO     | mean x: 1760489267.0
[2025-10-15 04:55:13] 2025-10-15 02:12:40,439 | INFO     | mean y: 2375627.4790419163
[2025-10-15 04:55:13] 2025-10-15 02:12:40,439 | INFO     | -- intersect: 43408124220.511055
[2025-10-15 04:55:13] 2025-10-15 02:12:40,439 | INFO     | intersect: 43408124220.511055
[2025-10-15 04:55:13] 2025-10-15 02:12:40,439 | INFO     | chi2: 2.1014611165554125
[2025-10-15 04:55:13] 2025-10-15 02:12:40,439 | INFO     | sum of square deviations: 1318277740.5
[2025-10-15 04:55:13] 2025-10-15 02:12:40,440 | INFO     | sum of deviations: -24681087634.0
[2025-10-15 04:55:13] 2025-10-15 02:12:40,440 | INFO     | mean x: 1760489114.5
[2025-10-15 04:55:13] 2025-10-15 02:12:40,440 | INFO     | mean y: 2388583.641975309
[2025-10-15 04:55:13] 2025-10-15 02:12:40,440 | INFO     | -- intersect: 32962655436.966396
[2025-10-15 04:55:13] 2025-10-15 02:12:40,440 | INFO     | intersect: 32962655436.966396
[2025-10-15 04:55:13] 2025-10-15 02:12:40,440 | INFO     | chi2: 1.442507688542317
[2025-10-15 04:55:13] 2025-10-15 02:12:40,440 | INFO     | current chi2=1.442507688542317 (change=31.356917471459667 %)
[2025-10-15 04:55:13] 2025-10-15 02:12:40,440 | INFO     | sum of square deviations: 1199940638.0
[2025-10-15 04:55:13] 2025-10-15 02:12:40,441 | INFO     | sum of deviations: -23476315246.999996
[2025-10-15 04:55:13] 2025-10-15 02:12:40,441 | INFO     | mean x: 1760488962.0
[2025-10-15 04:55:13] 2025-10-15 02:12:40,441 | INFO     | mean y: 2390135.7834394905
[2025-10-15 04:55:13] 2025-10-15 02:12:40,441 | INFO     | -- intersect: 34445588867.39919
[2025-10-15 04:55:13] 2025-10-15 02:12:40,441 | INFO     | intersect: 34445588867.39919
[2025-10-15 04:55:13] 2025-10-15 02:12:40,441 | INFO     | chi2: 1.437862113524617
[2025-10-15 04:55:13] 2025-10-15 02:12:40,441 | INFO     | current chi2=1.437862113524617 (change=0.3220485446697589 %)
[2025-10-15 04:55:13] 2025-10-15 02:12:40,441 | INFO     | right removable region: 156
[2025-10-15 04:55:13] 2025-10-15 02:12:40,441 | INFO     | sum of square deviations: 1318277740.5
[2025-10-15 04:55:13] 2025-10-15 02:12:40,442 | INFO     | sum of deviations: -52867908067.5
[2025-10-15 04:55:13] 2025-10-15 02:12:40,442 | INFO     | mean x: 1760489419.5
[2025-10-15 04:55:13] 2025-10-15 02:12:40,442 | INFO     | mean y: 2396099.524691358
[2025-10-15 04:55:13] 2025-10-15 02:12:40,442 | INFO     | -- intersect: 70604659890.0301
[2025-10-15 04:55:13] 2025-10-15 02:12:40,442 | INFO     | intersect: 70604659890.0301
[2025-10-15 04:55:13] 2025-10-15 02:12:40,442 | INFO     | chi2: 0.8692558250766267
[2025-10-15 04:55:13] 2025-10-15 02:12:40,442 | INFO     | current chi2=0.8692558250766267 (change=58.63564554068657 %)
[2025-10-15 04:55:13] 2025-10-15 02:12:40,443 | INFO     | sum of square deviations: 1199940638.0
[2025-10-15 04:55:13] 2025-10-15 02:12:40,443 | INFO     | sum of deviations: -45304675112.0
[2025-10-15 04:55:13] 2025-10-15 02:12:40,443 | INFO     | mean x: 1760489572.0
[2025-10-15 04:55:13] 2025-10-15 02:12:40,443 | INFO     | mean y: 2386343.9108280255
[2025-10-15 04:55:13] 2025-10-15 02:12:40,443 | INFO     | -- intersect: 66471014517.43547
[2025-10-15 04:55:13] 2025-10-15 02:12:40,443 | INFO     | intersect: 66471014517.43547
[2025-10-15 04:55:13] 2025-10-15 02:12:40,443 | INFO     | chi2: 0.8531336070278066
[2025-10-15 04:55:13] 2025-10-15 02:12:40,444 | INFO     | current chi2=0.8531336070278066 (change=1.8547149853610556 %)
[2025-10-15 04:55:13] 2025-10-15 02:12:40,444 | INFO     | left removable region: 20
[2025-10-15 04:55:13] 2025-10-15 02:12:40,444 | INFO     | sum of square deviations: 779958810.0
[2025-10-15 04:55:13] 2025-10-15 02:12:40,444 | INFO     | sum of deviations: -18335461404.499996
[2025-10-15 04:55:13] 2025-10-15 02:12:40,444 | INFO     | mean x: 1760489541.5
[2025-10-15 04:55:13] 2025-10-15 02:12:40,444 | INFO     | mean y: 2378632.507352941
[2025-10-15 04:55:13] 2025-10-15 02:12:40,444 | INFO     | -- intersect: 41388394954.57332
[2025-10-15 04:55:13] 2025-10-15 02:12:40,444 | INFO     | intersect: 41388394954.57332
[2025-10-15 04:55:13] 2025-10-15 02:12:40,445 | INFO     | chi2: 0.0866205528584784
[2025-10-15 04:55:13] 2025-10-15 02:12:40,445 | INFO     | -- intersect: 41388394954.57332
[2025-10-15 04:55:13] 2025-10-15 02:12:40,445 | INFO     | current memory leak: -23.51 B/s (using 136 data points, chi2=0.09)
[2025-10-15 04:55:13] 2025-10-15 02:12:40,445 | INFO     | could have reported an average CPU frequency of 2682 MHz (9 samples)
[2025-10-15 04:55:13] 2025-10-15 02:12:40,445 | INFO     | ..............................
[2025-10-15 04:55:13] 2025-10-15 02:12:40,445 | INFO     | . Timing measurements:
[2025-10-15 04:55:13] 2025-10-15 02:12:40,445 | INFO     | . get job = 0 s
[2025-10-15 04:55:13] 2025-10-15 02:12:40,445 | INFO     | . initial setup = 1 s
[2025-10-15 04:55:13] 2025-10-15 02:12:40,445 | INFO     | . payload setup = 6 s
[2025-10-15 04:55:13] 2025-10-15 02:12:40,445 | INFO     | . stage-in = 0 s
[2025-10-15 04:55:13] 2025-10-15 02:12:40,445 | INFO     | . payload execution = 10149 s
[2025-10-15 04:55:13] 2025-10-15 02:12:40,446 | INFO     | . stage-out = 0 s
[2025-10-15 04:55:13] 2025-10-15 02:12:40,446 | INFO     | . log creation = 0 s
[2025-10-15 04:55:13] 2025-10-15 02:12:40,446 | INFO     | ..............................
[2025-10-15 04:55:13] 2025-10-15 02:12:40,503 | INFO     | 
[2025-10-15 04:55:13] 2025-10-15 02:12:40,503 | INFO     | job summary report
[2025-10-15 04:55:13] 2025-10-15 02:12:40,504 | INFO     | --------------------------------------------------
[2025-10-15 04:55:13] 2025-10-15 02:12:40,504 | INFO     | PanDA job id: 6844827887
[2025-10-15 04:55:13] 2025-10-15 02:12:40,504 | INFO     | task id: 46676269
[2025-10-15 04:55:13] 2025-10-15 02:12:40,504 | INFO     | errors: (none)
[2025-10-15 04:55:13] 2025-10-15 02:12:40,504 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-15 04:55:13] 2025-10-15 02:12:40,504 | INFO     | pilot state: finished 
[2025-10-15 04:55:13] 2025-10-15 02:12:40,504 | INFO     | transexitcode: 0
[2025-10-15 04:55:13] 2025-10-15 02:12:40,504 | INFO     | exeerrorcode: 0
[2025-10-15 04:55:13] 2025-10-15 02:12:40,504 | INFO     | exeerrordiag: 
[2025-10-15 04:55:13] 2025-10-15 02:12:40,504 | INFO     | exitcode: 0
[2025-10-15 04:55:13] 2025-10-15 02:12:40,504 | INFO     | exitmsg: OK
[2025-10-15 04:55:13] 2025-10-15 02:12:40,504 | INFO     | cpuconsumptiontime: 39225 s
[2025-10-15 04:55:13] 2025-10-15 02:12:40,505 | INFO     | nevents: 400
[2025-10-15 04:55:13] 2025-10-15 02:12:40,505 | INFO     | neventsw: 0
[2025-10-15 04:55:13] 2025-10-15 02:12:40,505 | INFO     | pid: 3561942
[2025-10-15 04:55:13] 2025-10-15 02:12:40,505 | INFO     | pgrp: 3561942
[2025-10-15 04:55:13] 2025-10-15 02:12:40,505 | INFO     | corecount: 4
[2025-10-15 04:55:13] 2025-10-15 02:12:40,505 | INFO     | event service: False
[2025-10-15 04:55:13] 2025-10-15 02:12:40,505 | INFO     | sizes: {0: 2348881, 4: 2349143, 11: 2349171, 10159: 2377889, 10160: 2386909, 10163: 2386965, 10168: 2387351}
[2025-10-15 04:55:13] 2025-10-15 02:12:40,505 | INFO     | --------------------------------------------------
[2025-10-15 04:55:13] 2025-10-15 02:12:40,505 | INFO     | 
[2025-10-15 04:55:13] 2025-10-15 02:12:40,505 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2025-10-15 04:55:13] 2025-10-15 02:12:40,524 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-15 04:55:13] 2025-10-15 02:12:40,524 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-15 04:55:13] 2025-10-15 02:12:40,525 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-15 04:55:13] 2025-10-15 02:12:40,525 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-15 04:55:13] 2025-10-15 02:12:40,525 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-15 04:55:13] 2025-10-15 02:12:40,525 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-15 04:55:13] 2025-10-15 02:12:40,525 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-15 04:55:13] 2025-10-15 02:12:40,525 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-15 04:55:13] 2025-10-15 02:12:40,525 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-15 04:55:13] 2025-10-15 02:12:40,525 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-15 04:55:13] 2025-10-15 02:12:40,525 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-15 04:55:13] 2025-10-15 02:12:40,525 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-15 04:55:13] 2025-10-15 02:12:40,525 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-15 04:55:13] 2025-10-15 02:12:40,525 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-15 04:55:13] 2025-10-15 02:12:40,525 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-15 04:55:13] 2025-10-15 02:12:40,525 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-15 04:55:13] 2025-10-15 02:12:40,525 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-15 04:55:13] 2025-10-15 02:12:40,525 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-15 04:55:13] 2025-10-15 02:12:40,525 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-15 04:55:13] 2025-10-15 02:12:40,525 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-15 04:55:13] 2025-10-15 02:12:40,526 | INFO     | job 6844827887 has completed (purged errors)
[2025-10-15 04:55:13] 2025-10-15 02:12:40,526 | INFO     | overall cleanup function is called
[2025-10-15 04:55:13] 2025-10-15 02:12:41,532 | INFO     | --- collectZombieJob: --- 10, [3561942]
[2025-10-15 04:55:13] 2025-10-15 02:12:41,533 | INFO     | zombie collector waiting for pid 3561942
[2025-10-15 04:55:13] 2025-10-15 02:12:41,533 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-15 04:55:13] 2025-10-15 02:12:41,533 | INFO     | collected zombie processes
[2025-10-15 04:55:13] 2025-10-15 02:12:41,533 | INFO     | will attempt to kill all subprocesses of pid=3561942
[2025-10-15 04:55:13] 2025-10-15 02:12:41,893 | INFO     | process IDs to be killed: [3561942] (in reverse order)
[2025-10-15 04:55:13] 2025-10-15 02:12:42,006 | WARNING  | found no corresponding commands to process id(s)
[2025-10-15 04:55:13] 2025-10-15 02:12:42,006 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-15 04:55:13] 2025-10-15 02:12:42,019 | INFO     | did not find any defunct processes belonging to 3561942
[2025-10-15 04:55:13] 2025-10-15 02:12:42,032 | INFO     | did not find any defunct processes belonging to 3561942
[2025-10-15 04:55:13] 2025-10-15 02:12:42,032 | INFO     | ready for new job
[2025-10-15 04:55:13] 2025-10-15 02:12:42,032 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-15 04:55:13] 2025-10-15 02:12:42,035 | INFO     | ***************************************
[2025-10-15 04:55:13] 2025-10-15 02:12:42,035 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-15 04:55:13] 2025-10-15 02:12:42,035 | INFO     | ***************************************
[2025-10-15 04:55:13] 2025-10-15 02:12:42,035 | INFO     | 
[2025-10-15 04:55:13] 2025-10-15 02:12:42,039 | INFO     | architecture information:
[2025-10-15 04:55:13] 2025-10-15 02:12:42,039 | INFO     | executing command: cat /etc/os-release
[2025-10-15 04:55:13] 2025-10-15 02:12:42,055 | INFO     | cat /etc/os-release:
[2025-10-15 04:55:13] NAME="CentOS Linux"
[2025-10-15 04:55:13] VERSION="7 (Core)"
[2025-10-15 04:55:13] ID="centos"
[2025-10-15 04:55:13] ID_LIKE="rhel fedora"
[2025-10-15 04:55:13] VERSION_ID="7"
[2025-10-15 04:55:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-15 04:55:13] ANSI_COLOR="0;31"
[2025-10-15 04:55:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-15 04:55:13] HOME_URL="https://www.centos.org/"
[2025-10-15 04:55:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-15 04:55:13] 
[2025-10-15 04:55:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-15 04:55:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-15 04:55:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-15 04:55:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-15 04:55:13] 
[2025-10-15 04:55:13] 2025-10-15 02:12:42,056 | INFO     | ***************************************
[2025-10-15 04:55:13] 2025-10-15 02:12:42,558 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2025-10-15 04:55:13] 2025-10-15 02:12:42,575 | INFO     | sufficient remaining disk space (707964960768 B)
[2025-10-15 04:55:13] 2025-10-15 02:12:42,576 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-15 04:55:13] 2025-10-15 02:12:42,576 | INFO     | current server update state: UPDATING_FINAL
[2025-10-15 04:55:13] 2025-10-15 02:12:42,576 | INFO     | update_server=False
[2025-10-15 04:55:13] 2025-10-15 02:12:42,576 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-15 04:55:13] 2025-10-15 02:12:42,577 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-15 04:55:13] 2025-10-15 02:12:42,577 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-15 04:55:13] 2025-10-15 02:12:42,577 | INFO     | aborting loop
[2025-10-15 04:55:13] 2025-10-15 02:12:42,648 | INFO     | all data control threads have been joined
[2025-10-15 04:55:13] 2025-10-15 02:12:43,358 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-15 04:55:13] 2025-10-15 02:12:43,531 | INFO     | all payload control threads have been joined
[2025-10-15 04:55:13] 2025-10-15 02:12:43,579 | INFO     | [job] job monitor thread has finished
[2025-10-15 04:55:13] 2025-10-15 02:12:43,582 | INFO     | [job] retrieve thread has finished
[2025-10-15 04:55:13] 2025-10-15 02:12:43,653 | INFO     | [data] control thread has finished
[2025-10-15 04:55:13] 2025-10-15 02:12:43,750 | INFO     | [job] validate thread has finished
[2025-10-15 04:55:13] 2025-10-15 02:12:43,849 | INFO     | [job] create_data_payload thread has finished
[2025-10-15 04:55:13] 2025-10-15 02:12:43,951 | INFO     | [data] copytool_in thread has finished
[2025-10-15 04:55:13] 2025-10-15 02:12:44,035 | INFO     | [payload] validate_pre thread has finished
[2025-10-15 04:55:13] 2025-10-15 02:12:44,053 | INFO     | all job control threads have been joined
[2025-10-15 04:55:13] 2025-10-15 02:12:44,062 | INFO     | [payload] validate_post thread has finished
[2025-10-15 04:55:13] 2025-10-15 02:12:44,537 | INFO     | [payload] control thread has finished
[2025-10-15 04:55:13] 2025-10-15 02:12:44,765 | INFO     | [payload] execute_payloads thread has finished
[2025-10-15 04:55:13] 2025-10-15 02:12:44,815 | INFO     | [payload] failed_post thread has finished
[2025-10-15 04:55:13] 2025-10-15 02:12:45,059 | INFO     | [job] control thread has finished
[2025-10-15 04:55:13] 2025-10-15 02:12:45,364 | INFO     | [data] copytool_out thread has finished
[2025-10-15 04:55:13] 2025-10-15 02:12:45,514 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-15 04:55:13] 2025-10-15 02:12:46,519 | INFO     | [job] queue monitor thread has finished
[2025-10-15 04:55:13] 2025-10-15 02:12:46,583 | INFO     | [data] queue_monitor thread has finished
[2025-10-15 04:55:13] 2025-10-15 02:12:53,466 | INFO     | job.realtimelogging is not enabled
[2025-10-15 04:55:13] 2025-10-15 02:12:54,472 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-15 04:55:13] 2025-10-15 02:13:12,268 | INFO     | [monitor] cgroup control has ended
[2025-10-15 04:55:13] 2025-10-15 02:13:13,473 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22495341213504)>', '<ExcThread(monitor, started 22495098787584)>']
[2025-10-15 04:55:13] 2025-10-15 02:13:13,722 | INFO     | PID=3554985 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-15 04:55:13] 2025-10-15 02:13:13,722 | INFO     | .. there are 4 such processes running
[2025-10-15 04:55:13] 2025-10-15 02:13:13,724 | INFO     | found 0 job(s) in 20 queues
[2025-10-15 04:55:13] 2025-10-15 02:13:13,724 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-15 04:55:13] 2025-10-15 02:13:13,724 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-15 04:55:13] 2025-10-15 02:13:13,724 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-15 04:55:13] 2025-10-15 02:13:13,724 | INFO     | [monitor] control thread has ended
[2025-10-15 04:55:13] 2025-10-15 02:13:18,498 | INFO     | all workflow threads have been joined
[2025-10-15 04:55:13] 2025-10-15 02:13:18,498 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-15 04:55:13] 2025-10-15 02:13:18,499 | INFO     | traces error code: 0
[2025-10-15 04:55:13] 2025-10-15 02:13:18,499 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-15 04:55:13] 2025-10-15 02:13:18,666 [wrapper] ==== pilot stdout END ====
[2025-10-15 04:55:13] 2025-10-15 02:13:18,669 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-15 04:55:13] 2025-10-15 02:13:18,671 [wrapper] pilotpid: 3554985
[2025-10-15 04:55:13] 2025-10-15 02:13:18,674 [wrapper] Pilot exit status: 0
[2025-10-15 04:55:13] 2025-10-15 02:13:18,684 [wrapper] pandaids: 6844827887
[2025-10-15 04:55:13] 2025-10-15 02:13:18,754 [wrapper] cleanup supervisor_pilot 3740191 3554986
[2025-10-15 04:55:13] 2025-10-15 02:13:18,758 [wrapper] Test setup, not cleaning
[2025-10-15 04:55:13] 2025-10-15 02:13:18,760 [wrapper] apfmon messages muted
[2025-10-15 04:55:13] 2025-10-15 02:13:18,763 [wrapper] ==== wrapper stdout END ====
[2025-10-15 04:55:13] 2025-10-15 02:13:18,766 [wrapper] ==== wrapper stderr END ====
[2025-10-15 04:55:13]  *** Error codes and diagnostics ***
[2025-10-15 04:55:13]     "exeErrorCode": 0,
[2025-10-15 04:55:13]     "exeErrorDiag": "",
[2025-10-15 04:55:13]     "pilotErrorCode": 0,
[2025-10-15 04:55:13]     "pilotErrorDiag": "",
[2025-10-15 04:55:13]  *** Listing of results directory ***
[2025-10-15 04:55:13] total 417824
[2025-10-15 04:55:13] -rw-r--r-- 1 boinc boinc    557409 Oct 14 22:56 pilot3.tar.gz
[2025-10-15 04:55:13] -rw-r--r-- 1 boinc boinc      5112 Oct 14 23:41 queuedata.json
[2025-10-15 04:55:13] -rwx------ 1 boinc boinc     36292 Oct 14 23:44 runpilot2-wrapper.sh
[2025-10-15 04:55:13] -rw-r--r-- 1 boinc boinc       100 Oct 15 00:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-15 04:55:13] -rwxr-xr-x 1 boinc boinc      7986 Oct 15 00:36 run_atlas
[2025-10-15 04:55:13] -rw-r--r-- 1 boinc boinc       105 Oct 15 00:36 job.xml
[2025-10-15 04:55:13] -rw-r--r-- 2 boinc boinc 223248100 Oct 15 01:22 EVNT.46676267._004348.pool.root.1
[2025-10-15 04:55:13] -rw-r--r-- 1 boinc boinc      6634 Oct 15 01:22 init_data.xml
[2025-10-15 04:55:13] -rw-r--r-- 2 boinc boinc     15120 Oct 15 01:22 start_atlas.sh
[2025-10-15 04:55:13] drwxrwx--x 2 boinc boinc      4096 Oct 15 01:22 shared
[2025-10-15 04:55:13] -rw-r--r-- 2 boinc boinc    569686 Oct 15 01:22 input.tar.gz
[2025-10-15 04:55:13] -rw-r--r-- 1 boinc boinc         0 Oct 15 01:22 boinc_lockfile
[2025-10-15 04:55:13] -rw-r--r-- 1 boinc boinc      2549 Oct 15 01:22 pandaJob.out
[2025-10-15 04:55:13] -rw------- 1 boinc boinc    974015 Oct 15 01:22 agis_schedconf.cvmfs.json
[2025-10-15 04:55:13] -rw------- 1 boinc boinc   1560740 Oct 15 01:22 agis_ddmendpoints.agis.ALL.json
[2025-10-15 04:55:13] drwx------ 5 boinc boinc      4096 Oct 15 01:22 pilot3
[2025-10-15 04:55:13] -rw------- 1 boinc boinc 197073537 Oct 15 04:11 HITS.46676269._097268.pool.root.1
[2025-10-15 04:55:13] -rw-r--r-- 1 boinc boinc       529 Oct 15 04:12 boinc_task_state.xml
[2025-10-15 04:55:13] -rw------- 1 boinc boinc      1029 Oct 15 04:12 memory_monitor_summary.json
[2025-10-15 04:55:13] -rw------- 1 boinc boinc    360517 Oct 15 04:12 log.46676269._097268.job.log.tgz.1
[2025-10-15 04:55:13] -rw------- 1 boinc boinc      7831 Oct 15 04:12 heartbeat.json
[2025-10-15 04:55:13] -rw------- 1 boinc boinc        95 Oct 15 04:13 pilot_heartbeat.json
[2025-10-15 04:55:13] -rw------- 1 boinc boinc      4905 Oct 15 04:13 pilotlog.txt
[2025-10-15 04:55:13] -rw------- 1 boinc boinc   1451553 Oct 15 04:13 log.46676269._097268.job.log.1
[2025-10-15 04:55:13] -rw------- 1 boinc boinc       357 Oct 15 04:13 output.list
[2025-10-15 04:55:13] -rw-r--r-- 1 boinc boinc       620 Oct 15 04:13 runtime_log
[2025-10-15 04:55:13] -rw------- 1 boinc boinc   1832960 Oct 15 04:13 result.tar.gz
[2025-10-15 04:55:13] -rw-r--r-- 1 boinc boinc      9070 Oct 15 04:13 runtime_log.err
[2025-10-15 04:55:13] -rw------- 1 boinc boinc       665 Oct 15 04:13 E0VKDmlz1S8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJsmNDmqaW8gn.diag
[2025-10-15 04:55:13] -rw-r--r-- 1 boinc boinc        27 Oct 15 04:55 wrapper_checkpoint.txt
[2025-10-15 04:55:13] -rw-r--r-- 1 boinc boinc      8192 Oct 15 04:55 boinc_mmap_file
[2025-10-15 04:55:13] -rw-r--r-- 1 boinc boinc     20645 Oct 15 04:55 stderr.txt
[2025-10-15 04:55:13] HITS file was successfully produced:
[2025-10-15 04:55:13] -rw------- 1 boinc boinc 197073537 Oct 15 04:11 shared/HITS.pool.root.1
[2025-10-15 04:55:13]  *** Contents of shared directory: ***
[2025-10-15 04:55:13] total 412848
[2025-10-15 04:55:13] -rw-r--r-- 2 boinc boinc 223248100 Oct 15 01:22 ATLAS.root_0
[2025-10-15 04:55:13] -rw-r--r-- 2 boinc boinc     15120 Oct 15 01:22 start_atlas.sh
[2025-10-15 04:55:13] -rw-r--r-- 2 boinc boinc    569686 Oct 15 01:22 input.tar.gz
[2025-10-15 04:55:13] -rw------- 1 boinc boinc 197073537 Oct 15 04:11 HITS.pool.root.1
[2025-10-15 04:55:13] -rw------- 1 boinc boinc   1832960 Oct 15 04:13 result.tar.gz
04:55:15 (3550905): run_atlas exited; CPU time 39661.673805
04:55:15 (3550905): called boinc_finish(0)

</stderr_txt>
]]>

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