Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:27:35 (2925365): wrapper (7.7.26015): starting
17:27:35 (2925365): wrapper: running run_atlas (--nthreads 8)
[2025-10-14 17:27:35] Arguments: --nthreads 8
[2025-10-14 17:27:35] Threads: 8
[2025-10-14 17:27:35] Checking for CVMFS
[2025-10-14 17:27:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 17:27:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 17:27:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 17:27:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 17:27:35] 2.13.2.0 5060 9099 147276 151711 2 208 31228789 40960000 20261 16776704 0 29455316 99.794 15333472 34878 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-14 17:27:35] CVMFS is ok
[2025-10-14 17:27:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 17:27:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 17:27:35] Further information can be found at the LHC@home message board.
[2025-10-14 17:27:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 17:27:35] Checking for apptainer binary...
[2025-10-14 17:27:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 17:27:35] Running /usr/bin/apptainer --version
[2025-10-14 17:27:36] apptainer version 1.4.3-1.el9
[2025-10-14 17:27:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 17:27:36] c-212-3.aglt2.org
[2025-10-14 17:27:36] apptainer works
[2025-10-14 17:27:36] Set ATHENA_PROC_NUMBER=8
[2025-10-14 17:27:36] Set ATHENA_CORE_NUMBER=8
[2025-10-14 17:27:36] Starting ATLAS job with PandaID=6834376899
[2025-10-14 17:27:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 18:49:01]  *** The last 200 lines of the pilot log: ***
[2025-10-14 18:49:01]  storage_token=
[2025-10-14 18:49:01]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6834376899/log.46376905._134334.job.log.tgz.1
[2025-10-14 18:49:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/57/log.46376905._134334.job.log.tgz.1
[2025-10-14 18:49:01]  workdir=None
[2025-10-14 18:49:01] ]
[2025-10-14 18:49:01] 2025-10-14 22:48:08,021 | INFO     | transferring file log.46376905._134334.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6834376899/log.46376905._134334.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-14 18:49:01] 2025-10-14 22:48:08,021 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6834376899/log.46376905._134334.job.log.tgz.1 /tmp/boinchome/slots/1/log.46376905._134334.job
[2025-10-14 18:49:01] 2025-10-14 22:48:08,043 | INFO     | adding to output.list: log.46376905._134334.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/57/log.46376905._134334.job.log.tg
[2025-10-14 18:49:01] 2025-10-14 22:48:08,044 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-14 18:49:01] 2025-10-14 22:48:08,045 | INFO     | summary of transferred files:
[2025-10-14 18:49:01] 2025-10-14 22:48:08,045 | INFO     |  -- lfn=log.46376905._134334.job.log.tgz.1, status_code=0, status=transferred
[2025-10-14 18:49:01] 2025-10-14 22:48:08,045 | INFO     | stage-out finished correctly
[2025-10-14 18:49:01] 2025-10-14 22:48:08,566 | INFO     | time since job start (4820s) is within the limit (172800.0s)
[2025-10-14 18:49:01] 2025-10-14 22:48:08,829 | WARNING  | process 2949500 can no longer be monitored (due to stat problems) - aborting
[2025-10-14 18:49:01] 2025-10-14 22:48:08,829 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6834376899/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 18:49:01] 2025-10-14 22:48:09,186 | INFO     | number of running child processes to parent process 2949500: 1
[2025-10-14 18:49:01] 2025-10-14 22:48:09,186 | INFO     | maximum number of monitored processes: 6
[2025-10-14 18:49:01] 2025-10-14 22:48:10,579 | INFO     | time since job start (4822s) is within the limit (172800.0s)
[2025-10-14 18:49:01] 2025-10-14 22:48:10,643 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-14 18:49:01] 2025-10-14 22:48:11,365 | INFO     | job 6834376899 has state=finished
[2025-10-14 18:49:01] 2025-10-14 22:48:11,365 | INFO     | preparing for final server update for job 6834376899 in state='finished'
[2025-10-14 18:49:01] 2025-10-14 22:48:11,365 | INFO     | this job has now completed (state=finished)
[2025-10-14 18:49:01] 2025-10-14 22:48:11,366 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-14 18:49:01] 2025-10-14 22:48:11,366 | INFO     | log transfer has been attempted: DONE
[2025-10-14 18:49:01] 2025-10-14 22:48:11,366 | INFO     | job 6834376899 has finished - writing final server update
[2025-10-14 18:49:01] 2025-10-14 22:48:11,366 | INFO     | total number of processed events: 400 (read)
[2025-10-14 18:49:01] 2025-10-14 22:48:11,367 | INFO     | executing command: lscpu
[2025-10-14 18:49:01] 2025-10-14 22:48:11,442 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-14 18:49:01] 2025-10-14 22:48:11,691 | INFO     | monitor loop #353: job 0:6834376899 is in state 'finished'
[2025-10-14 18:49:01] 2025-10-14 22:48:11,692 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 18:49:01] 2025-10-14 22:48:12,074 | INFO     | PID=2931514 has CPU usage=13.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-14 18:49:01] 2025-10-14 22:48:12,074 | INFO     | .. there are 19 such processes running
[2025-10-14 18:49:01] 2025-10-14 22:48:13,076 | INFO     | time since job start (4825s) is within the limit (172800.0s)
[2025-10-14 18:49:01] 2025-10-14 22:48:14,195 | INFO     | monitor loop #354: job 0:6834376899 is in state 'finished'
[2025-10-14 18:49:01] 2025-10-14 22:48:14,195 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 18:49:01] 2025-10-14 22:48:15,082 | INFO     | time since job start (4827s) is within the limit (172800.0s)
[2025-10-14 18:49:01] 2025-10-14 22:48:15,638 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 18:49:01] 2025-10-14 22:48:15,644 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3103.619614583334
[2025-10-14 18:49:01] 2025-10-14 22:48:15,659 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6834376899/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 18:49:01] 2025-10-14 22:48:15,659 | INFO     | extracted standard info from prmon json
[2025-10-14 18:49:01] 2025-10-14 22:48:15,659 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 18:49:01] 2025-10-14 22:48:15,660 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 18:49:01] 2025-10-14 22:48:15,660 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 18:49:01] 2025-10-14 22:48:15,660 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 18:49:01] 2025-10-14 22:48:15,662 | INFO     | fitting pss+swap vs Time
[2025-10-14 18:49:01] 2025-10-14 22:48:15,662 | INFO     | sum of square deviations: 115715658.0
[2025-10-14 18:49:01] 2025-10-14 22:48:15,662 | INFO     | sum of deviations: -7773362156.5
[2025-10-14 18:49:01] 2025-10-14 22:48:15,662 | INFO     | mean x: 1760479766.5
[2025-10-14 18:49:01] 2025-10-14 22:48:15,662 | INFO     | mean y: 2619396.513888889
[2025-10-14 18:49:01] 2025-10-14 22:48:15,662 | INFO     | -- intersect: 118265324986.40958
[2025-10-14 18:49:01] 2025-10-14 22:48:15,663 | INFO     | intersect: 118265324986.40958
[2025-10-14 18:49:01] 2025-10-14 22:48:15,663 | INFO     | chi2: 0.03235611353327769
[2025-10-14 18:49:01] 2025-10-14 22:48:15,663 | INFO     | -- intersect: 118265324986.40958
[2025-10-14 18:49:01] 2025-10-14 22:48:15,663 | INFO     | current memory leak: -67.18 B/s (using 72 data points, chi2=0.03)
[2025-10-14 18:49:01] 2025-10-14 22:48:15,663 | INFO     | could have reported an average CPU frequency of 3110 MHz (6 samples)
[2025-10-14 18:49:01] 2025-10-14 22:48:15,663 | INFO     | ..............................
[2025-10-14 18:49:01] 2025-10-14 22:48:15,664 | INFO     | . Timing measurements:
[2025-10-14 18:49:01] 2025-10-14 22:48:15,664 | INFO     | . get job = 0 s
[2025-10-14 18:49:01] 2025-10-14 22:48:15,664 | INFO     | . initial setup = 2 s
[2025-10-14 18:49:01] 2025-10-14 22:48:15,664 | INFO     | . payload setup = 6 s
[2025-10-14 18:49:01] 2025-10-14 22:48:15,664 | INFO     | . stage-in = 0 s
[2025-10-14 18:49:01] 2025-10-14 22:48:15,664 | INFO     | . payload execution = 4793 s
[2025-10-14 18:49:01] 2025-10-14 22:48:15,664 | INFO     | . stage-out = 0 s
[2025-10-14 18:49:01] 2025-10-14 22:48:15,664 | INFO     | . log creation = 0 s
[2025-10-14 18:49:01] 2025-10-14 22:48:15,664 | INFO     | ..............................
[2025-10-14 18:49:01] 2025-10-14 22:48:15,744 | INFO     | 
[2025-10-14 18:49:01] 2025-10-14 22:48:15,745 | INFO     | job summary report
[2025-10-14 18:49:01] 2025-10-14 22:48:15,745 | INFO     | --------------------------------------------------
[2025-10-14 18:49:01] 2025-10-14 22:48:15,745 | INFO     | PanDA job id: 6834376899
[2025-10-14 18:49:01] 2025-10-14 22:48:15,745 | INFO     | task id: 46376905
[2025-10-14 18:49:01] 2025-10-14 22:48:15,745 | INFO     | errors: (none)
[2025-10-14 18:49:01] 2025-10-14 22:48:15,745 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 18:49:01] 2025-10-14 22:48:15,745 | INFO     | pilot state: finished 
[2025-10-14 18:49:01] 2025-10-14 22:48:15,745 | INFO     | transexitcode: 0
[2025-10-14 18:49:01] 2025-10-14 22:48:15,745 | INFO     | exeerrorcode: 0
[2025-10-14 18:49:01] 2025-10-14 22:48:15,745 | INFO     | exeerrordiag: 
[2025-10-14 18:49:01] 2025-10-14 22:48:15,745 | INFO     | exitcode: 0
[2025-10-14 18:49:01] 2025-10-14 22:48:15,746 | INFO     | exitmsg: OK
[2025-10-14 18:49:01] 2025-10-14 22:48:15,746 | INFO     | cpuconsumptiontime: 31499 s
[2025-10-14 18:49:01] 2025-10-14 22:48:15,746 | INFO     | nevents: 400
[2025-10-14 18:49:01] 2025-10-14 22:48:15,746 | INFO     | neventsw: 0
[2025-10-14 18:49:01] 2025-10-14 22:48:15,746 | INFO     | pid: 2949500
[2025-10-14 18:49:01] 2025-10-14 22:48:15,746 | INFO     | pgrp: 2949500
[2025-10-14 18:49:01] 2025-10-14 22:48:15,746 | INFO     | corecount: 8
[2025-10-14 18:49:01] 2025-10-14 22:48:15,746 | INFO     | event service: False
[2025-10-14 18:49:01] 2025-10-14 22:48:15,746 | INFO     | sizes: {0: 2348659, 1: 2348858, 6: 2349120, 11: 2349148, 4802: 2375448, 4803: 2384446, 4806: 2384630, 4811: 2384824}
[2025-10-14 18:49:01] 2025-10-14 22:48:15,746 | INFO     | --------------------------------------------------
[2025-10-14 18:49:01] 2025-10-14 22:48:15,746 | INFO     | 
[2025-10-14 18:49:01] 2025-10-14 22:48:15,746 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-14 18:49:01] 2025-10-14 22:48:15,768 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 18:49:01] 2025-10-14 22:48:15,768 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 18:49:01] 2025-10-14 22:48:15,768 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 18:49:01] 2025-10-14 22:48:15,768 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 18:49:01] 2025-10-14 22:48:15,768 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 18:49:01] 2025-10-14 22:48:15,768 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 18:49:01] 2025-10-14 22:48:15,769 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 18:49:01] 2025-10-14 22:48:15,769 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 18:49:01] 2025-10-14 22:48:15,769 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 18:49:01] 2025-10-14 22:48:15,769 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 18:49:01] 2025-10-14 22:48:15,769 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 18:49:01] 2025-10-14 22:48:15,769 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 18:49:01] 2025-10-14 22:48:15,769 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 18:49:01] 2025-10-14 22:48:15,769 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 18:49:01] 2025-10-14 22:48:15,769 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 18:49:01] 2025-10-14 22:48:15,769 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 18:49:01] 2025-10-14 22:48:15,769 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 18:49:01] 2025-10-14 22:48:15,769 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 18:49:01] 2025-10-14 22:48:15,769 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 18:49:01] 2025-10-14 22:48:15,770 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 18:49:01] 2025-10-14 22:48:15,770 | INFO     | job 6834376899 has completed (purged errors)
[2025-10-14 18:49:01] 2025-10-14 22:48:15,770 | INFO     | overall cleanup function is called
[2025-10-14 18:49:01] 2025-10-14 22:48:16,780 | INFO     | --- collectZombieJob: --- 10, [2949500]
[2025-10-14 18:49:01] 2025-10-14 22:48:16,780 | INFO     | zombie collector waiting for pid 2949500
[2025-10-14 18:49:01] 2025-10-14 22:48:16,780 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 18:49:01] 2025-10-14 22:48:16,780 | INFO     | collected zombie processes
[2025-10-14 18:49:01] 2025-10-14 22:48:16,780 | INFO     | will attempt to kill all subprocesses of pid=2949500
[2025-10-14 18:49:01] 2025-10-14 22:48:17,141 | INFO     | process IDs to be killed: [2949500] (in reverse order)
[2025-10-14 18:49:01] 2025-10-14 22:48:17,252 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 18:49:01] 2025-10-14 22:48:17,253 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 18:49:01] 2025-10-14 22:48:17,267 | INFO     | did not find any defunct processes belonging to 2949500
[2025-10-14 18:49:01] 2025-10-14 22:48:17,280 | INFO     | did not find any defunct processes belonging to 2949500
[2025-10-14 18:49:01] 2025-10-14 22:48:17,280 | INFO     | ready for new job
[2025-10-14 18:49:01] 2025-10-14 22:48:17,280 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 18:49:01] 2025-10-14 22:48:17,283 | INFO     | ***************************************
[2025-10-14 18:49:01] 2025-10-14 22:48:17,283 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-14 18:49:01] 2025-10-14 22:48:17,283 | INFO     | ***************************************
[2025-10-14 18:49:01] 2025-10-14 22:48:17,283 | INFO     | 
[2025-10-14 18:49:01] 2025-10-14 22:48:17,304 | INFO     | architecture information:
[2025-10-14 18:49:01] 2025-10-14 22:48:17,305 | INFO     | executing command: cat /etc/os-release
[2025-10-14 18:49:01] 2025-10-14 22:48:17,322 | INFO     | cat /etc/os-release:
[2025-10-14 18:49:01] NAME="CentOS Linux"
[2025-10-14 18:49:01] VERSION="7 (Core)"
[2025-10-14 18:49:01] ID="centos"
[2025-10-14 18:49:01] ID_LIKE="rhel fedora"
[2025-10-14 18:49:01] VERSION_ID="7"
[2025-10-14 18:49:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 18:49:01] ANSI_COLOR="0;31"
[2025-10-14 18:49:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 18:49:01] HOME_URL="https://www.centos.org/"
[2025-10-14 18:49:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 18:49:01] 
[2025-10-14 18:49:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 18:49:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 18:49:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 18:49:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 18:49:01] 
[2025-10-14 18:49:01] 2025-10-14 22:48:17,322 | INFO     | ***************************************
[2025-10-14 18:49:01] 2025-10-14 22:48:17,825 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-14 18:49:01] 2025-10-14 22:48:17,848 | INFO     | sufficient remaining disk space (129269497856 B)
[2025-10-14 18:49:01] 2025-10-14 22:48:17,849 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 18:49:01] 2025-10-14 22:48:17,849 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 18:49:01] 2025-10-14 22:48:17,849 | INFO     | update_server=False
[2025-10-14 18:49:01] 2025-10-14 22:48:17,849 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 18:49:01] 2025-10-14 22:48:17,850 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 18:49:01] 2025-10-14 22:48:17,851 | INFO     | aborting loop
[2025-10-14 18:49:01] 2025-10-14 22:48:18,225 | INFO     | all data control threads have been joined
[2025-10-14 18:49:01] 2025-10-14 22:48:18,345 | INFO     | all job control threads have been joined
[2025-10-14 18:49:01] 2025-10-14 22:48:18,661 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 18:49:01] 2025-10-14 22:48:18,851 | INFO     | all payload control threads have been joined
[2025-10-14 18:49:01] 2025-10-14 22:48:18,854 | INFO     | [job] retrieve thread has finished
[2025-10-14 18:49:01] 2025-10-14 22:48:18,856 | INFO     | [job] job monitor thread has finished
[2025-10-14 18:49:01] 2025-10-14 22:48:19,102 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 18:49:01] 2025-10-14 22:48:19,230 | INFO     | [data] control thread has finished
[2025-10-14 18:49:01] 2025-10-14 22:48:19,351 | INFO     | [job] control thread has finished
[2025-10-14 18:49:01] 2025-10-14 22:48:19,423 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 18:49:01] 2025-10-14 22:48:19,511 | INFO     | [payload] validate_post thread has finished
[2025-10-14 18:49:01] 2025-10-14 22:48:19,627 | INFO     | [job] validate thread has finished
[2025-10-14 18:49:01] 2025-10-14 22:48:19,783 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 18:49:01] 2025-10-14 22:48:19,816 | INFO     | [payload] failed_post thread has finished
[2025-10-14 18:49:01] 2025-10-14 22:48:19,856 | INFO     | [payload] control thread has finished
[2025-10-14 18:49:01] 2025-10-14 22:48:20,232 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 18:49:01] 2025-10-14 22:48:20,316 | INFO     | [data] copytool_in thread has finished
[2025-10-14 18:49:01] 2025-10-14 22:48:20,674 | INFO     | [data] copytool_out thread has finished
[2025-10-14 18:49:01] 2025-10-14 22:48:20,755 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 18:49:01] 2025-10-14 22:48:21,225 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 18:49:01] 2025-10-14 22:48:21,761 | INFO     | [job] queue monitor thread has finished
[2025-10-14 18:49:01] 2025-10-14 22:48:25,231 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 18:49:01] 2025-10-14 22:48:48,601 | INFO     | PID=2931514 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 18:49:01] 2025-10-14 22:48:48,601 | INFO     | .. there are 19 such processes running
[2025-10-14 18:49:01] 2025-10-14 22:48:48,602 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 18:49:01] 2025-10-14 22:48:48,602 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 18:49:01] 2025-10-14 22:48:48,602 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 18:49:01] 2025-10-14 22:48:55,826 | INFO     | [monitor] cgroup control has ended
[2025-10-14 18:49:01] 2025-10-14 22:48:56,316 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140626910799680)>', '<ExcThread(monitor, started 140626263787264)>']
[2025-10-14 18:49:01] 2025-10-14 22:48:56,642 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 18:49:01] 2025-10-14 22:48:56,642 | INFO     | [monitor] control thread has ended
[2025-10-14 18:49:01] 2025-10-14 22:49:01,341 | INFO     | all workflow threads have been joined
[2025-10-14 18:49:01] 2025-10-14 22:49:01,342 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 18:49:01] 2025-10-14 22:49:01,342 | INFO     | traces error code: 0
[2025-10-14 18:49:01] 2025-10-14 22:49:01,342 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 18:49:01] 2025-10-14 22:49:01,517 [wrapper] ==== pilot stdout END ====
[2025-10-14 18:49:01] 2025-10-14 22:49:01,519 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 18:49:01] 2025-10-14 22:49:01,521 [wrapper] pilotpid: 2931514
[2025-10-14 18:49:01] 2025-10-14 22:49:01,523 [wrapper] Pilot exit status: 0
[2025-10-14 18:49:01] 2025-10-14 22:49:01,533 [wrapper] pandaids: 6834376899
[2025-10-14 18:49:01] 2025-10-14 22:49:01,609 [wrapper] cleanup supervisor_pilot 3097264 2931515
[2025-10-14 18:49:01] 2025-10-14 22:49:01,612 [wrapper] Test setup, not cleaning
[2025-10-14 18:49:01] 2025-10-14 22:49:01,614 [wrapper] apfmon messages muted
[2025-10-14 18:49:01] 2025-10-14 22:49:01,617 [wrapper] ==== wrapper stdout END ====
[2025-10-14 18:49:01] 2025-10-14 22:49:01,620 [wrapper] ==== wrapper stderr END ====
[2025-10-14 18:49:01]  *** Error codes and diagnostics ***
[2025-10-14 18:49:01]     "exeErrorCode": 0,
[2025-10-14 18:49:01]     "exeErrorDiag": "",
[2025-10-14 18:49:01]     "pilotErrorCode": 0,
[2025-10-14 18:49:01]     "pilotErrorDiag": "",
[2025-10-14 18:49:01]  *** Listing of results directory ***
[2025-10-14 18:49:01] total 387608
[2025-10-14 18:49:01] -rw-r--r--. 1 boincer umatlas    552446 Oct  7 07:55 pilot3.tar.gz
[2025-10-14 18:49:01] -rw-r--r--. 1 boincer umatlas      5112 Oct  7 08:24 queuedata.json
[2025-10-14 18:49:01] -rwx------. 1 boincer umatlas     36292 Oct  7 08:25 runpilot2-wrapper.sh
[2025-10-14 18:49:01] -rw-r--r--. 1 boincer umatlas       100 Oct 14 17:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 18:49:01] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 14 17:27 run_atlas
[2025-10-14 18:49:01] -rw-r--r--. 1 boincer umatlas       105 Oct 14 17:27 job.xml
[2025-10-14 18:49:01] -rw-r--r--. 2 boincer umatlas 216319830 Oct 14 17:27 EVNT.46376901._003445.pool.root.1
[2025-10-14 18:49:01] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 17:27 start_atlas.sh
[2025-10-14 18:49:01] drwxrwx--x. 2 boincer umatlas      4096 Oct 14 17:27 shared
[2025-10-14 18:49:01] -rw-r--r--. 2 boincer umatlas    565605 Oct 14 17:27 input.tar.gz
[2025-10-14 18:49:01] -rw-r--r--. 1 boincer umatlas         0 Oct 14 17:27 boinc_lockfile
[2025-10-14 18:49:01] -rw-r--r--. 1 boincer umatlas      2519 Oct 14 17:27 pandaJob.out
[2025-10-14 18:49:01] -rw-------. 1 boincer umatlas    974007 Oct 14 17:27 agis_schedconf.cvmfs.json
[2025-10-14 18:49:01] -rw-------. 1 boincer umatlas   1560740 Oct 14 17:27 agis_ddmendpoints.agis.ALL.json
[2025-10-14 18:49:01] drwx------. 4 boincer umatlas      4096 Oct 14 17:27 pilot3
[2025-10-14 18:49:01] -rw-r--r--. 1 boincer umatlas      6946 Oct 14 18:38 init_data.xml
[2025-10-14 18:49:01] -rw-------. 1 boincer umatlas 174651606 Oct 14 18:47 HITS.46376905._134334.pool.root.1
[2025-10-14 18:49:01] -rw-r--r--. 1 boincer umatlas       529 Oct 14 18:47 boinc_task_state.xml
[2025-10-14 18:49:01] -rw-------. 1 boincer umatlas      1032 Oct 14 18:48 memory_monitor_summary.json
[2025-10-14 18:49:01] -rw-------. 1 boincer umatlas    328494 Oct 14 18:48 log.46376905._134334.job.log.tgz.1
[2025-10-14 18:49:01] -rw-------. 1 boincer umatlas        95 Oct 14 18:48 pilot_heartbeat.json
[2025-10-14 18:49:01] -rw-------. 1 boincer umatlas      7774 Oct 14 18:48 heartbeat.json
[2025-10-14 18:49:01] -rw-r--r--. 1 boincer umatlas      8192 Oct 14 18:48 boinc_mmap_file
[2025-10-14 18:49:01] -rw-r--r--. 1 boincer umatlas        27 Oct 14 18:48 wrapper_checkpoint.txt
[2025-10-14 18:49:01] -rw-------. 1 boincer umatlas      4825 Oct 14 18:49 pilotlog.txt
[2025-10-14 18:49:01] -rw-------. 1 boincer umatlas    700199 Oct 14 18:49 log.46376905._134334.job.log.1
[2025-10-14 18:49:01] -rw-------. 1 boincer umatlas       357 Oct 14 18:49 output.list
[2025-10-14 18:49:01] -rw-r--r--. 1 boincer umatlas       620 Oct 14 18:49 runtime_log
[2025-10-14 18:49:01] -rw-------. 1 boincer umatlas   1044480 Oct 14 18:49 result.tar.gz
[2025-10-14 18:49:01] -rw-r--r--. 1 boincer umatlas      8698 Oct 14 18:49 runtime_log.err
[2025-10-14 18:49:01] -rw-------. 1 boincer umatlas       651 Oct 14 18:49 RloKDmnvLQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmz2WNDme6YFdn.diag
[2025-10-14 18:49:01] -rw-r--r--. 1 boincer umatlas     22293 Oct 14 18:49 stderr.txt
[2025-10-14 18:49:01] HITS file was successfully produced:
[2025-10-14 18:49:01] -rw-------. 1 boincer umatlas 174651606 Oct 14 18:47 shared/HITS.pool.root.1
[2025-10-14 18:49:01]  *** Contents of shared directory: ***
[2025-10-14 18:49:01] total 383408
[2025-10-14 18:49:01] -rw-r--r--. 2 boincer umatlas 216319830 Oct 14 17:27 ATLAS.root_0
[2025-10-14 18:49:01] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 17:27 start_atlas.sh
[2025-10-14 18:49:01] -rw-r--r--. 2 boincer umatlas    565605 Oct 14 17:27 input.tar.gz
[2025-10-14 18:49:01] -rw-------. 1 boincer umatlas 174651606 Oct 14 18:47 HITS.pool.root.1
[2025-10-14 18:49:01] -rw-------. 1 boincer umatlas   1044480 Oct 14 18:49 result.tar.gz
18:49:02 (2925365): run_atlas exited; CPU time 31575.157960
18:49:02 (2925365): called boinc_finish(0)

</stderr_txt>
]]>

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