Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:27:23 (2921656): wrapper (7.7.26015): starting
17:27:23 (2921656): wrapper: running run_atlas (--nthreads 8)
[2025-10-14 17:27:23] Arguments: --nthreads 8
[2025-10-14 17:27:23] Threads: 8
[2025-10-14 17:27:23] Checking for CVMFS
[2025-10-14 17:27:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 17:27:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 17:27:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 17:27:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 17:27:23] 2.13.2.0 5060 9099 147624 151711 2 202 31228741 40960000 20176 16776704 0 29445379 99.794 15333466 34878 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-14 17:27:23] CVMFS is ok
[2025-10-14 17:27:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 17:27:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 17:27:23] Further information can be found at the LHC@home message board.
[2025-10-14 17:27:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 17:27:23] Checking for apptainer binary...
[2025-10-14 17:27:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 17:27:23] Running /usr/bin/apptainer --version
[2025-10-14 17:27:24] apptainer version 1.4.3-1.el9
[2025-10-14 17:27:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 17:27:24] c-212-3.aglt2.org
[2025-10-14 17:27:24] apptainer works
[2025-10-14 17:27:24] Set ATHENA_PROC_NUMBER=8
[2025-10-14 17:27:24] Set ATHENA_CORE_NUMBER=8
[2025-10-14 17:27:24] Starting ATLAS job with PandaID=6833172294
[2025-10-14 17:27:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 18:59:52]  *** The last 200 lines of the pilot log: ***
[2025-10-14 18:59:52]  status_code=0
[2025-10-14 18:59:52]  storage_token=
[2025-10-14 18:59:52]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6833172294/log.46376905._130012.job.log.tgz.1
[2025-10-14 18:59:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/ca/log.46376905._130012.job.log.tgz.1
[2025-10-14 18:59:52]  workdir=None
[2025-10-14 18:59:52] ]
[2025-10-14 18:59:52] 2025-10-14 22:58:47,367 | INFO     | transferring file log.46376905._130012.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6833172294/log.46376905._130012.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-14 18:59:52] 2025-10-14 22:58:47,367 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6833172294/log.46376905._130012.job.log.tgz.1 /tmp/boinchome/slots/0/log.46376905._130012.job
[2025-10-14 18:59:52] 2025-10-14 22:58:47,383 | INFO     | adding to output.list: log.46376905._130012.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/ca/log.46376905._130012.job.log.tg
[2025-10-14 18:59:52] 2025-10-14 22:58:47,384 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-14 18:59:52] 2025-10-14 22:58:47,384 | INFO     | summary of transferred files:
[2025-10-14 18:59:52] 2025-10-14 22:58:47,384 | INFO     |  -- lfn=log.46376905._130012.job.log.tgz.1, status_code=0, status=transferred
[2025-10-14 18:59:52] 2025-10-14 22:58:47,384 | INFO     | stage-out finished correctly
[2025-10-14 18:59:52] 2025-10-14 22:58:47,872 | INFO     | time since job start (5470s) is within the limit (172800.0s)
[2025-10-14 18:59:52] 2025-10-14 22:58:48,639 | WARNING  | process 2938823 can no longer be monitored (due to stat problems) - aborting
[2025-10-14 18:59:52] 2025-10-14 22:58:48,639 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6833172294/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 18:59:52] 2025-10-14 22:58:48,960 | INFO     | number of running child processes to parent process 2938823: 1
[2025-10-14 18:59:52] 2025-10-14 22:58:48,960 | INFO     | maximum number of monitored processes: 6
[2025-10-14 18:59:52] 2025-10-14 22:58:49,878 | INFO     | time since job start (5472s) is within the limit (172800.0s)
[2025-10-14 18:59:52] 2025-10-14 22:58:50,537 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-14 18:59:52] 2025-10-14 22:58:50,602 | INFO     | job 6833172294 has state=finished
[2025-10-14 18:59:52] 2025-10-14 22:58:50,602 | INFO     | preparing for final server update for job 6833172294 in state='finished'
[2025-10-14 18:59:52] 2025-10-14 22:58:50,603 | INFO     | this job has now completed (state=finished)
[2025-10-14 18:59:52] 2025-10-14 22:58:50,603 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-14 18:59:52] 2025-10-14 22:58:50,603 | INFO     | log transfer has been attempted: DONE
[2025-10-14 18:59:52] 2025-10-14 22:58:50,603 | INFO     | job 6833172294 has finished - writing final server update
[2025-10-14 18:59:52] 2025-10-14 22:58:50,604 | INFO     | total number of processed events: 400 (read)
[2025-10-14 18:59:52] 2025-10-14 22:58:50,604 | INFO     | executing command: lscpu
[2025-10-14 18:59:52] 2025-10-14 22:58:50,669 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-14 18:59:52] 2025-10-14 22:58:51,463 | INFO     | monitor loop #400: job 0:6833172294 is in state 'finished'
[2025-10-14 18:59:52] 2025-10-14 22:58:51,464 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 18:59:52] 2025-10-14 22:58:51,884 | INFO     | time since job start (5474s) is within the limit (172800.0s)
[2025-10-14 18:59:52] 2025-10-14 22:58:53,889 | INFO     | time since job start (5476s) is within the limit (172800.0s)
[2025-10-14 18:59:52] 2025-10-14 22:58:53,966 | INFO     | monitor loop #401: job 0:6833172294 is in state 'finished'
[2025-10-14 18:59:52] 2025-10-14 22:58:53,966 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 18:59:52] 2025-10-14 22:58:55,167 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 18:59:52] 2025-10-14 22:58:55,174 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3116.096802083334
[2025-10-14 18:59:52] 2025-10-14 22:58:55,189 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6833172294/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 18:59:52] 2025-10-14 22:58:55,190 | INFO     | extracted standard info from prmon json
[2025-10-14 18:59:52] 2025-10-14 22:58:55,190 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 18:59:52] 2025-10-14 22:58:55,190 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 18:59:52] 2025-10-14 22:58:55,190 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 18:59:52] 2025-10-14 22:58:55,190 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 18:59:52] 2025-10-14 22:58:55,192 | INFO     | fitting pss+swap vs Time
[2025-10-14 18:59:52] 2025-10-14 22:58:55,193 | INFO     | sum of square deviations: 177275882.0
[2025-10-14 18:59:52] 2025-10-14 22:58:55,193 | INFO     | sum of deviations: -7935703439.000001
[2025-10-14 18:59:52] 2025-10-14 22:58:55,193 | INFO     | mean x: 1760480091.0
[2025-10-14 18:59:52] 2025-10-14 22:58:55,193 | INFO     | mean y: 2607234.4457831327
[2025-10-14 18:59:52] 2025-10-14 22:58:55,193 | INFO     | -- intersect: 78809987882.19647
[2025-10-14 18:59:52] 2025-10-14 22:58:55,193 | INFO     | intersect: 78809987882.19647
[2025-10-14 18:59:52] 2025-10-14 22:58:55,193 | INFO     | chi2: 0.04039134345874576
[2025-10-14 18:59:52] 2025-10-14 22:58:55,194 | INFO     | -- intersect: 78809987882.19647
[2025-10-14 18:59:52] 2025-10-14 22:58:55,194 | INFO     | current memory leak: -44.76 B/s (using 83 data points, chi2=0.04)
[2025-10-14 18:59:52] 2025-10-14 22:58:55,194 | INFO     | could have reported an average CPU frequency of 3175 MHz (7 samples)
[2025-10-14 18:59:52] 2025-10-14 22:58:55,194 | INFO     | ..............................
[2025-10-14 18:59:52] 2025-10-14 22:58:55,194 | INFO     | . Timing measurements:
[2025-10-14 18:59:52] 2025-10-14 22:58:55,194 | INFO     | . get job = 0 s
[2025-10-14 18:59:52] 2025-10-14 22:58:55,194 | INFO     | . initial setup = 2 s
[2025-10-14 18:59:52] 2025-10-14 22:58:55,194 | INFO     | . payload setup = 6 s
[2025-10-14 18:59:52] 2025-10-14 22:58:55,194 | INFO     | . stage-in = 0 s
[2025-10-14 18:59:52] 2025-10-14 22:58:55,194 | INFO     | . payload execution = 5445 s
[2025-10-14 18:59:52] 2025-10-14 22:58:55,194 | INFO     | . stage-out = 0 s
[2025-10-14 18:59:52] 2025-10-14 22:58:55,195 | INFO     | . log creation = 0 s
[2025-10-14 18:59:52] 2025-10-14 22:58:55,195 | INFO     | ..............................
[2025-10-14 18:59:52] 2025-10-14 22:58:55,280 | INFO     | 
[2025-10-14 18:59:52] 2025-10-14 22:58:55,280 | INFO     | job summary report
[2025-10-14 18:59:52] 2025-10-14 22:58:55,280 | INFO     | --------------------------------------------------
[2025-10-14 18:59:52] 2025-10-14 22:58:55,280 | INFO     | PanDA job id: 6833172294
[2025-10-14 18:59:52] 2025-10-14 22:58:55,280 | INFO     | task id: 46376905
[2025-10-14 18:59:52] 2025-10-14 22:58:55,280 | INFO     | errors: (none)
[2025-10-14 18:59:52] 2025-10-14 22:58:55,280 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 18:59:52] 2025-10-14 22:58:55,280 | INFO     | pilot state: finished 
[2025-10-14 18:59:52] 2025-10-14 22:58:55,280 | INFO     | transexitcode: 0
[2025-10-14 18:59:52] 2025-10-14 22:58:55,280 | INFO     | exeerrorcode: 0
[2025-10-14 18:59:52] 2025-10-14 22:58:55,280 | INFO     | exeerrordiag: 
[2025-10-14 18:59:52] 2025-10-14 22:58:55,280 | INFO     | exitcode: 0
[2025-10-14 18:59:52] 2025-10-14 22:58:55,280 | INFO     | exitmsg: OK
[2025-10-14 18:59:52] 2025-10-14 22:58:55,280 | INFO     | cpuconsumptiontime: 30904 s
[2025-10-14 18:59:52] 2025-10-14 22:58:55,280 | INFO     | nevents: 400
[2025-10-14 18:59:52] 2025-10-14 22:58:55,281 | INFO     | neventsw: 0
[2025-10-14 18:59:52] 2025-10-14 22:58:55,281 | INFO     | pid: 2938823
[2025-10-14 18:59:52] 2025-10-14 22:58:55,281 | INFO     | pgrp: 2938823
[2025-10-14 18:59:52] 2025-10-14 22:58:55,281 | INFO     | corecount: 8
[2025-10-14 18:59:52] 2025-10-14 22:58:55,281 | INFO     | event service: False
[2025-10-14 18:59:52] 2025-10-14 22:58:55,281 | INFO     | sizes: {0: 2348878, 6: 2349140, 11: 2349168, 5452: 2375617, 5454: 2384615, 5458: 2384671, 5462: 2384993}
[2025-10-14 18:59:52] 2025-10-14 22:58:55,281 | INFO     | --------------------------------------------------
[2025-10-14 18:59:52] 2025-10-14 22:58:55,281 | INFO     | 
[2025-10-14 18:59:52] 2025-10-14 22:58:55,281 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-14 18:59:52] 2025-10-14 22:58:55,305 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 18:59:52] 2025-10-14 22:58:55,305 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 18:59:52] 2025-10-14 22:58:55,305 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 18:59:52] 2025-10-14 22:58:55,305 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 18:59:52] 2025-10-14 22:58:55,305 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 18:59:52] 2025-10-14 22:58:55,305 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 18:59:52] 2025-10-14 22:58:55,305 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 18:59:52] 2025-10-14 22:58:55,305 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 18:59:52] 2025-10-14 22:58:55,305 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 18:59:52] 2025-10-14 22:58:55,305 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 18:59:52] 2025-10-14 22:58:55,305 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 18:59:52] 2025-10-14 22:58:55,305 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 18:59:52] 2025-10-14 22:58:55,305 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 18:59:52] 2025-10-14 22:58:55,306 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 18:59:52] 2025-10-14 22:58:55,306 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 18:59:52] 2025-10-14 22:58:55,306 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 18:59:52] 2025-10-14 22:58:55,306 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 18:59:52] 2025-10-14 22:58:55,306 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 18:59:52] 2025-10-14 22:58:55,306 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 18:59:52] 2025-10-14 22:58:55,306 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 18:59:52] 2025-10-14 22:58:55,306 | INFO     | job 6833172294 has completed (purged errors)
[2025-10-14 18:59:52] 2025-10-14 22:58:55,306 | INFO     | overall cleanup function is called
[2025-10-14 18:59:52] 2025-10-14 22:58:56,313 | INFO     | --- collectZombieJob: --- 10, [2938823]
[2025-10-14 18:59:52] 2025-10-14 22:58:56,313 | INFO     | zombie collector waiting for pid 2938823
[2025-10-14 18:59:52] 2025-10-14 22:58:56,313 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 18:59:52] 2025-10-14 22:58:56,313 | INFO     | collected zombie processes
[2025-10-14 18:59:52] 2025-10-14 22:58:56,314 | INFO     | will attempt to kill all subprocesses of pid=2938823
[2025-10-14 18:59:52] 2025-10-14 22:58:56,597 | INFO     | process IDs to be killed: [2938823] (in reverse order)
[2025-10-14 18:59:52] 2025-10-14 22:58:56,726 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 18:59:52] 2025-10-14 22:58:56,727 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 18:59:52] 2025-10-14 22:58:56,740 | INFO     | did not find any defunct processes belonging to 2938823
[2025-10-14 18:59:52] 2025-10-14 22:58:56,754 | INFO     | did not find any defunct processes belonging to 2938823
[2025-10-14 18:59:52] 2025-10-14 22:58:56,755 | INFO     | ready for new job
[2025-10-14 18:59:52] 2025-10-14 22:58:56,755 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 18:59:52] 2025-10-14 22:58:56,757 | INFO     | ***************************************
[2025-10-14 18:59:52] 2025-10-14 22:58:56,757 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-14 18:59:52] 2025-10-14 22:58:56,757 | INFO     | ***************************************
[2025-10-14 18:59:52] 2025-10-14 22:58:56,757 | INFO     | 
[2025-10-14 18:59:52] 2025-10-14 22:58:56,762 | INFO     | architecture information:
[2025-10-14 18:59:52] 2025-10-14 22:58:56,762 | INFO     | executing command: cat /etc/os-release
[2025-10-14 18:59:52] 2025-10-14 22:58:56,783 | INFO     | cat /etc/os-release:
[2025-10-14 18:59:52] NAME="CentOS Linux"
[2025-10-14 18:59:52] VERSION="7 (Core)"
[2025-10-14 18:59:52] ID="centos"
[2025-10-14 18:59:52] ID_LIKE="rhel fedora"
[2025-10-14 18:59:52] VERSION_ID="7"
[2025-10-14 18:59:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 18:59:52] ANSI_COLOR="0;31"
[2025-10-14 18:59:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 18:59:52] HOME_URL="https://www.centos.org/"
[2025-10-14 18:59:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 18:59:52] 
[2025-10-14 18:59:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 18:59:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 18:59:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 18:59:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 18:59:52] 
[2025-10-14 18:59:52] 2025-10-14 22:58:56,783 | INFO     | ***************************************
[2025-10-14 18:59:52] 2025-10-14 22:58:57,284 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-14 18:59:52] 2025-10-14 22:58:57,303 | INFO     | sufficient remaining disk space (129861943296 B)
[2025-10-14 18:59:52] 2025-10-14 22:58:57,303 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 18:59:52] 2025-10-14 22:58:57,303 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 18:59:52] 2025-10-14 22:58:57,303 | INFO     | update_server=False
[2025-10-14 18:59:52] 2025-10-14 22:58:57,303 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 18:59:52] 2025-10-14 22:58:57,304 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 18:59:52] 2025-10-14 22:58:57,474 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 18:59:52] 2025-10-14 22:58:57,474 | INFO     | aborting loop
[2025-10-14 18:59:52] 2025-10-14 22:58:57,495 | INFO     | all data control threads have been joined
[2025-10-14 18:59:52] 2025-10-14 22:58:57,527 | INFO     | all job control threads have been joined
[2025-10-14 18:59:52] 2025-10-14 22:58:57,970 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 18:59:52] 2025-10-14 22:58:58,309 | INFO     | [job] retrieve thread has finished
[2025-10-14 18:59:52] 2025-10-14 22:58:58,479 | INFO     | [job] job monitor thread has finished
[2025-10-14 18:59:52] 2025-10-14 22:58:58,501 | INFO     | [data] control thread has finished
[2025-10-14 18:59:52] 2025-10-14 22:58:58,517 | INFO     | [job] validate thread has finished
[2025-10-14 18:59:52] 2025-10-14 22:58:58,533 | INFO     | [job] control thread has finished
[2025-10-14 18:59:52] 2025-10-14 22:58:58,725 | INFO     | all payload control threads have been joined
[2025-10-14 18:59:52] 2025-10-14 22:58:58,787 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 18:59:52] 2025-10-14 22:58:58,978 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 18:59:52] 2025-10-14 22:58:59,096 | INFO     | [payload] validate_post thread has finished
[2025-10-14 18:59:52] 2025-10-14 22:58:59,279 | INFO     | [data] copytool_in thread has finished
[2025-10-14 18:59:52] 2025-10-14 22:58:59,307 | INFO     | [payload] failed_post thread has finished
[2025-10-14 18:59:52] 2025-10-14 22:58:59,727 | INFO     | [payload] control thread has finished
[2025-10-14 18:59:52] 2025-10-14 22:58:59,788 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 18:59:52] 2025-10-14 22:58:59,979 | INFO     | [data] copytool_out thread has finished
[2025-10-14 18:59:52] 2025-10-14 22:59:00,297 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 18:59:52] 2025-10-14 22:59:01,303 | INFO     | [job] queue monitor thread has finished
[2025-10-14 18:59:52] 2025-10-14 22:59:01,309 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 18:59:52] 2025-10-14 22:59:08,282 | INFO     | job.realtimelogging is not enabled
[2025-10-14 18:59:52] 2025-10-14 22:59:09,287 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 18:59:52] 2025-10-14 22:59:27,346 | INFO     | PID=2925353 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 18:59:52] 2025-10-14 22:59:27,346 | INFO     | .. there are 19 such processes running
[2025-10-14 18:59:52] 2025-10-14 22:59:27,346 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 18:59:52] 2025-10-14 22:59:27,346 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 18:59:52] 2025-10-14 22:59:27,346 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 18:59:52] 2025-10-14 22:59:45,560 | INFO     | [monitor] cgroup control has ended
[2025-10-14 18:59:52] 2025-10-14 22:59:47,344 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140117565826880)>', '<ExcThread(monitor, started 140116924294912)>']
[2025-10-14 18:59:52] 2025-10-14 22:59:47,438 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 18:59:52] 2025-10-14 22:59:47,439 | INFO     | [monitor] control thread has ended
[2025-10-14 18:59:52] 2025-10-14 22:59:52,369 | INFO     | all workflow threads have been joined
[2025-10-14 18:59:52] 2025-10-14 22:59:52,369 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 18:59:52] 2025-10-14 22:59:52,370 | INFO     | traces error code: 0
[2025-10-14 18:59:52] 2025-10-14 22:59:52,370 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 18:59:52] 2025-10-14 22:59:52,535 [wrapper] ==== pilot stdout END ====
[2025-10-14 18:59:52] 2025-10-14 22:59:52,538 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 18:59:52] 2025-10-14 22:59:52,541 [wrapper] pilotpid: 2925353
[2025-10-14 18:59:52] 2025-10-14 22:59:52,543 [wrapper] Pilot exit status: 0
[2025-10-14 18:59:52] 2025-10-14 22:59:52,554 [wrapper] pandaids: 6833172294
[2025-10-14 18:59:52] 2025-10-14 22:59:52,634 [wrapper] cleanup supervisor_pilot 3114975 2925354
[2025-10-14 18:59:52] 2025-10-14 22:59:52,637 [wrapper] Test setup, not cleaning
[2025-10-14 18:59:52] 2025-10-14 22:59:52,643 [wrapper] apfmon messages muted
[2025-10-14 18:59:52] 2025-10-14 22:59:52,647 [wrapper] ==== wrapper stdout END ====
[2025-10-14 18:59:52] 2025-10-14 22:59:52,650 [wrapper] ==== wrapper stderr END ====
[2025-10-14 18:59:52]  *** Error codes and diagnostics ***
[2025-10-14 18:59:52]     "exeErrorCode": 0,
[2025-10-14 18:59:52]     "exeErrorDiag": "",
[2025-10-14 18:59:52]     "pilotErrorCode": 0,
[2025-10-14 18:59:52]     "pilotErrorDiag": "",
[2025-10-14 18:59:52]  *** Listing of results directory ***
[2025-10-14 18:59:52] total 390364
[2025-10-14 18:59:52] -rw-r--r--. 1 boincer umatlas    552446 Oct  7 02:48 pilot3.tar.gz
[2025-10-14 18:59:52] -rwx------. 1 boincer umatlas     36292 Oct  7 02:48 runpilot2-wrapper.sh
[2025-10-14 18:59:52] -rw-r--r--. 1 boincer umatlas      5112 Oct  7 02:48 queuedata.json
[2025-10-14 18:59:52] -rw-r--r--. 1 boincer umatlas       100 Oct 14 17:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 18:59:52] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 14 17:27 run_atlas
[2025-10-14 18:59:52] -rw-r--r--. 1 boincer umatlas       105 Oct 14 17:27 job.xml
[2025-10-14 18:59:52] -rw-r--r--. 2 boincer umatlas 214875253 Oct 14 17:27 EVNT.46376901._004843.pool.root.1
[2025-10-14 18:59:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 17:27 start_atlas.sh
[2025-10-14 18:59:52] drwxrwx--x. 2 boincer umatlas      4096 Oct 14 17:27 shared
[2025-10-14 18:59:52] -rw-r--r--. 2 boincer umatlas    565597 Oct 14 17:27 input.tar.gz
[2025-10-14 18:59:52] -rw-r--r--. 1 boincer umatlas         0 Oct 14 17:27 boinc_lockfile
[2025-10-14 18:59:52] -rw-r--r--. 1 boincer umatlas      2518 Oct 14 17:27 pandaJob.out
[2025-10-14 18:59:52] -rw-------. 1 boincer umatlas    974007 Oct 14 17:27 agis_schedconf.cvmfs.json
[2025-10-14 18:59:52] -rw-------. 1 boincer umatlas   1560740 Oct 14 17:27 agis_ddmendpoints.agis.ALL.json
[2025-10-14 18:59:52] drwx------. 4 boincer umatlas      4096 Oct 14 17:27 pilot3
[2025-10-14 18:59:52] -rw-------. 1 boincer umatlas 178729965 Oct 14 18:58 HITS.46376905._130012.pool.root.1
[2025-10-14 18:59:52] -rw-r--r--. 1 boincer umatlas       530 Oct 14 18:58 boinc_task_state.xml
[2025-10-14 18:59:52] -rw-------. 1 boincer umatlas        95 Oct 14 18:58 pilot_heartbeat.json
[2025-10-14 18:59:52] -rw-------. 1 boincer umatlas      1028 Oct 14 18:58 memory_monitor_summary.json
[2025-10-14 18:59:52] -rw-------. 1 boincer umatlas    323958 Oct 14 18:58 log.46376905._130012.job.log.tgz.1
[2025-10-14 18:59:52] -rw-r--r--. 1 boincer umatlas      6946 Oct 14 18:58 init_data.xml
[2025-10-14 18:59:52] -rw-------. 1 boincer umatlas      7768 Oct 14 18:58 heartbeat.json
[2025-10-14 18:59:52] -rw-r--r--. 1 boincer umatlas      8192 Oct 14 18:59 boinc_mmap_file
[2025-10-14 18:59:52] -rw-r--r--. 1 boincer umatlas        27 Oct 14 18:59 wrapper_checkpoint.txt
[2025-10-14 18:59:52] -rw-------. 1 boincer umatlas      4897 Oct 14 18:59 pilotlog.txt
[2025-10-14 18:59:52] -rw-------. 1 boincer umatlas    791012 Oct 14 18:59 log.46376905._130012.job.log.1
[2025-10-14 18:59:52] -rw-------. 1 boincer umatlas       357 Oct 14 18:59 output.list
[2025-10-14 18:59:52] -rw-r--r--. 1 boincer umatlas       620 Oct 14 18:59 runtime_log
[2025-10-14 18:59:52] -rw-------. 1 boincer umatlas   1136640 Oct 14 18:59 result.tar.gz
[2025-10-14 18:59:52] -rw-r--r--. 1 boincer umatlas      8698 Oct 14 18:59 runtime_log.err
[2025-10-14 18:59:52] -rw-------. 1 boincer umatlas       653 Oct 14 18:59 3DyLDm6fGQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnNWNDmfOlVxn.diag
[2025-10-14 18:59:52] -rw-r--r--. 1 boincer umatlas     22094 Oct 14 18:59 stderr.txt
[2025-10-14 18:59:52] HITS file was successfully produced:
[2025-10-14 18:59:52] -rw-------. 1 boincer umatlas 178729965 Oct 14 18:58 shared/HITS.pool.root.1
[2025-10-14 18:59:52]  *** Contents of shared directory: ***
[2025-10-14 18:59:52] total 386076
[2025-10-14 18:59:52] -rw-r--r--. 2 boincer umatlas 214875253 Oct 14 17:27 ATLAS.root_0
[2025-10-14 18:59:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 17:27 start_atlas.sh
[2025-10-14 18:59:52] -rw-r--r--. 2 boincer umatlas    565597 Oct 14 17:27 input.tar.gz
[2025-10-14 18:59:52] -rw-------. 1 boincer umatlas 178729965 Oct 14 18:58 HITS.pool.root.1
[2025-10-14 18:59:52] -rw-------. 1 boincer umatlas   1136640 Oct 14 18:59 result.tar.gz
18:59:54 (2921656): run_atlas exited; CPU time 31013.469248
18:59:54 (2921656): called boinc_finish(0)

</stderr_txt>
]]>

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