Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:44:00 (3191146): wrapper (7.7.26015): starting
13:44:00 (3191146): wrapper: running run_atlas (--nthreads 9)
[2025-10-14 13:44:00] Arguments: --nthreads 9
[2025-10-14 13:44:00] Threads: 9
[2025-10-14 13:44:00] Checking for CVMFS
[2025-10-14 13:44:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 13:44:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 13:44:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 13:44:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 13:44:00] 2.13.2.0 276976 139486 366892 151705 0 395 32858987 32935936 26660 16776704 0 273817435 99.599 272049977 20476 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-14 13:44:00] CVMFS is ok
[2025-10-14 13:44:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 13:44:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 13:44:00] Further information can be found at the LHC@home message board.
[2025-10-14 13:44:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 13:44:00] Checking for apptainer binary...
[2025-10-14 13:44:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 13:44:00] Running /usr/bin/apptainer --version
[2025-10-14 13:44:00] apptainer version 1.4.3-1.el9
[2025-10-14 13:44:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 13:44:00] c6-8-25-3.aglt2.org
[2025-10-14 13:44:00] apptainer works
[2025-10-14 13:44:00] Set ATHENA_PROC_NUMBER=9
[2025-10-14 13:44:00] Set ATHENA_CORE_NUMBER=9
[2025-10-14 13:44:00] Starting ATLAS job with PandaID=6844549005
[2025-10-14 13:44:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 15:58:37]  *** The last 200 lines of the pilot log: ***
[2025-10-14 15:58:37] 2025-10-14 19:57:31,467 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 15:58:37] 2025-10-14 19:57:31,467 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 15:58:37] 2025-10-14 19:57:31,469 | INFO     | fitting pss+swap vs Time
[2025-10-14 15:58:37] 2025-10-14 19:57:31,470 | INFO     | sum of square deviations: 697061157.725191
[2025-10-14 15:58:37] 2025-10-14 19:57:31,471 | INFO     | sum of deviations: 3790338821.992367
[2025-10-14 15:58:37] 2025-10-14 19:57:31,471 | INFO     | mean x: 1760467856.0458016
[2025-10-14 15:58:37] 2025-10-14 19:57:31,471 | INFO     | mean y: 2206737.1679389314
[2025-10-14 15:58:37] 2025-10-14 19:57:31,471 | INFO     | -- intersect: -9570510929.98221
[2025-10-14 15:58:37] 2025-10-14 19:57:31,471 | INFO     | intersect: -9570510929.98221
[2025-10-14 15:58:37] 2025-10-14 19:57:31,471 | INFO     | chi2: 2.448991168706861
[2025-10-14 15:58:37] 2025-10-14 19:57:31,472 | INFO     | sum of square deviations: 620252245.2142874
[2025-10-14 15:58:37] 2025-10-14 19:57:31,472 | INFO     | sum of deviations: 11796361100.976189
[2025-10-14 15:58:37] 2025-10-14 19:57:31,472 | INFO     | mean x: 1760467703.547619
[2025-10-14 15:58:37] 2025-10-14 19:57:31,472 | INFO     | mean y: 2222207.087301587
[2025-10-14 15:58:37] 2025-10-14 19:57:31,473 | INFO     | -- intersect: -33479498976.33107
[2025-10-14 15:58:37] 2025-10-14 19:57:31,473 | INFO     | intersect: -33479498976.33107
[2025-10-14 15:58:37] 2025-10-14 19:57:31,473 | INFO     | chi2: 1.7901196580428442
[2025-10-14 15:58:37] 2025-10-14 19:57:31,473 | INFO     | current chi2=1.7901196580428442 (change=26.90379283858014 %)
[2025-10-14 15:58:37] 2025-10-14 19:57:31,473 | INFO     | sum of square deviations: 549295976.7933904
[2025-10-14 15:58:37] 2025-10-14 19:57:31,474 | INFO     | sum of deviations: 10908117620.586779
[2025-10-14 15:58:37] 2025-10-14 19:57:31,474 | INFO     | mean x: 1760467551.0413222
[2025-10-14 15:58:37] 2025-10-14 19:57:31,474 | INFO     | mean y: 2220317.082644628
[2025-10-14 15:58:37] 2025-10-14 19:57:31,474 | INFO     | -- intersect: -34957779255.62163
[2025-10-14 15:58:37] 2025-10-14 19:57:31,474 | INFO     | intersect: -34957779255.62163
[2025-10-14 15:58:37] 2025-10-14 19:57:31,474 | INFO     | chi2: 1.7917404099850105
[2025-10-14 15:58:37] 2025-10-14 19:57:31,474 | INFO     | current chi2=1.7917404099850105 (change=-0.09053874889783903 %)
[2025-10-14 15:58:37] 2025-10-14 19:57:31,475 | INFO     | right removable region: 120
[2025-10-14 15:58:37] 2025-10-14 19:57:31,475 | INFO     | sum of square deviations: 620248585.2142874
[2025-10-14 15:58:37] 2025-10-14 19:57:31,475 | INFO     | sum of deviations: -15406723192.714281
[2025-10-14 15:58:37] 2025-10-14 19:57:31,475 | INFO     | mean x: 1760468008.547619
[2025-10-14 15:58:37] 2025-10-14 19:57:31,476 | INFO     | mean y: 2244360.619047619
[2025-10-14 15:58:37] 2025-10-14 19:57:31,476 | INFO     | -- intersect: 43731555388.31206
[2025-10-14 15:58:37] 2025-10-14 19:57:31,476 | INFO     | intersect: 43731555388.31206
[2025-10-14 15:58:37] 2025-10-14 19:57:31,476 | INFO     | chi2: 0.952083693684602
[2025-10-14 15:58:37] 2025-10-14 19:57:31,476 | INFO     | current chi2=0.952083693684602 (change=61.12343295270721 %)
[2025-10-14 15:58:37] 2025-10-14 19:57:31,476 | INFO     | sum of square deviations: 549304272.7933904
[2025-10-14 15:58:37] 2025-10-14 19:57:31,477 | INFO     | sum of deviations: -13113412233.041325
[2025-10-14 15:58:37] 2025-10-14 19:57:31,477 | INFO     | mean x: 1760468161.0413222
[2025-10-14 15:58:37] 2025-10-14 19:57:31,477 | INFO     | mean y: 2239289.008264463
[2025-10-14 15:58:37] 2025-10-14 19:57:31,477 | INFO     | -- intersect: 42029483318.04256
[2025-10-14 15:58:37] 2025-10-14 19:57:31,477 | INFO     | intersect: 42029483318.04256
[2025-10-14 15:58:37] 2025-10-14 19:57:31,477 | INFO     | chi2: 0.9252591551585696
[2025-10-14 15:58:37] 2025-10-14 19:57:31,477 | INFO     | current chi2=0.9252591551585696 (change=2.8174559341753196 %)
[2025-10-14 15:58:37] 2025-10-14 19:57:31,477 | INFO     | left removable region: 20
[2025-10-14 15:58:37] 2025-10-14 19:57:31,478 | INFO     | sum of square deviations: 310056110.84000015
[2025-10-14 15:58:37] 2025-10-14 19:57:31,478 | INFO     | sum of deviations: 4270810084.50002
[2025-10-14 15:58:37] 2025-10-14 19:57:31,478 | INFO     | mean x: 1760468130.54
[2025-10-14 15:58:37] 2025-10-14 19:57:31,478 | INFO     | mean y: 2230207.25
[2025-10-14 15:58:37] 2025-10-14 19:57:31,478 | INFO     | -- intersect: -24247009793.154327
[2025-10-14 15:58:37] 2025-10-14 19:57:31,479 | INFO     | intersect: -24247009793.154327
[2025-10-14 15:58:37] 2025-10-14 19:57:31,479 | INFO     | chi2: 0.03453555904220275
[2025-10-14 15:58:37] 2025-10-14 19:57:31,479 | INFO     | -- intersect: -24247009793.154327
[2025-10-14 15:58:37] 2025-10-14 19:57:31,479 | INFO     | current memory leak: 13.77 B/s (using 100 data points, chi2=0.03)
[2025-10-14 15:58:37] 2025-10-14 19:57:31,479 | INFO     | could have reported an average CPU frequency of 2670 MHz (8 samples)
[2025-10-14 15:58:37] 2025-10-14 19:57:31,480 | INFO     | ..............................
[2025-10-14 15:58:37] 2025-10-14 19:57:31,480 | INFO     | . Timing measurements:
[2025-10-14 15:58:37] 2025-10-14 19:57:31,480 | INFO     | . get job = 0 s
[2025-10-14 15:58:37] 2025-10-14 19:57:31,480 | INFO     | . initial setup = 3 s
[2025-10-14 15:58:37] 2025-10-14 19:57:31,480 | INFO     | . payload setup = 10 s
[2025-10-14 15:58:37] 2025-10-14 19:57:31,480 | INFO     | . stage-in = 0 s
[2025-10-14 15:58:37] 2025-10-14 19:57:31,480 | INFO     | . payload execution = 7946 s
[2025-10-14 15:58:37] 2025-10-14 19:57:31,480 | INFO     | . stage-out = 1 s
[2025-10-14 15:58:37] 2025-10-14 19:57:31,480 | INFO     | . log creation = 0 s
[2025-10-14 15:58:37] 2025-10-14 19:57:31,480 | INFO     | ..............................
[2025-10-14 15:58:37] 2025-10-14 19:57:31,587 | INFO     | 
[2025-10-14 15:58:37] 2025-10-14 19:57:31,587 | INFO     | job summary report
[2025-10-14 15:58:37] 2025-10-14 19:57:31,587 | INFO     | --------------------------------------------------
[2025-10-14 15:58:37] 2025-10-14 19:57:31,588 | INFO     | PanDA job id: 6844549005
[2025-10-14 15:58:37] 2025-10-14 19:57:31,588 | INFO     | task id: 46676269
[2025-10-14 15:58:37] 2025-10-14 19:57:31,588 | INFO     | errors: (none)
[2025-10-14 15:58:37] 2025-10-14 19:57:31,588 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 15:58:37] 2025-10-14 19:57:31,588 | INFO     | pilot state: finished 
[2025-10-14 15:58:37] 2025-10-14 19:57:31,588 | INFO     | transexitcode: 0
[2025-10-14 15:58:37] 2025-10-14 19:57:31,588 | INFO     | exeerrorcode: 0
[2025-10-14 15:58:37] 2025-10-14 19:57:31,588 | INFO     | exeerrordiag: 
[2025-10-14 15:58:37] 2025-10-14 19:57:31,588 | INFO     | exitcode: 0
[2025-10-14 15:58:37] 2025-10-14 19:57:31,588 | INFO     | exitmsg: OK
[2025-10-14 15:58:37] 2025-10-14 19:57:31,588 | INFO     | cpuconsumptiontime: 44634 s
[2025-10-14 15:58:37] 2025-10-14 19:57:31,588 | INFO     | nevents: 400
[2025-10-14 15:58:37] 2025-10-14 19:57:31,588 | INFO     | neventsw: 0
[2025-10-14 15:58:37] 2025-10-14 19:57:31,589 | INFO     | pid: 3206717
[2025-10-14 15:58:37] 2025-10-14 19:57:31,589 | INFO     | pgrp: 3206717
[2025-10-14 15:58:37] 2025-10-14 19:57:31,589 | INFO     | corecount: 9
[2025-10-14 15:58:37] 2025-10-14 19:57:31,589 | INFO     | event service: False
[2025-10-14 15:58:37] 2025-10-14 19:57:31,589 | INFO     | sizes: {0: 2348870, 1: 2348870, 6: 2349160, 11: 2349188, 7960: 2376953, 7962: 2385951, 7963: 2386135, 7978: 2386329}
[2025-10-14 15:58:37] 2025-10-14 19:57:31,589 | INFO     | --------------------------------------------------
[2025-10-14 15:58:37] 2025-10-14 19:57:31,589 | INFO     | 
[2025-10-14 15:58:37] 2025-10-14 19:57:31,589 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-14 15:58:37] 2025-10-14 19:57:31,756 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 15:58:37] 2025-10-14 19:57:31,757 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 15:58:37] 2025-10-14 19:57:31,757 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 15:58:37] 2025-10-14 19:57:31,757 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 15:58:37] 2025-10-14 19:57:31,757 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 15:58:37] 2025-10-14 19:57:31,757 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 15:58:37] 2025-10-14 19:57:31,757 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 15:58:37] 2025-10-14 19:57:31,757 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 15:58:37] 2025-10-14 19:57:31,757 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 15:58:37] 2025-10-14 19:57:31,757 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 15:58:37] 2025-10-14 19:57:31,757 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 15:58:37] 2025-10-14 19:57:31,758 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 15:58:37] 2025-10-14 19:57:31,758 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 15:58:37] 2025-10-14 19:57:31,758 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 15:58:37] 2025-10-14 19:57:31,758 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 15:58:37] 2025-10-14 19:57:31,758 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 15:58:37] 2025-10-14 19:57:31,758 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 15:58:37] 2025-10-14 19:57:31,758 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 15:58:37] 2025-10-14 19:57:31,758 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 15:58:37] 2025-10-14 19:57:31,758 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 15:58:37] 2025-10-14 19:57:31,758 | INFO     | job 6844549005 has completed (purged errors)
[2025-10-14 15:58:37] 2025-10-14 19:57:31,758 | INFO     | overall cleanup function is called
[2025-10-14 15:58:37] 2025-10-14 19:57:32,770 | INFO     | --- collectZombieJob: --- 10, [3206717]
[2025-10-14 15:58:37] 2025-10-14 19:57:32,770 | INFO     | zombie collector waiting for pid 3206717
[2025-10-14 15:58:37] 2025-10-14 19:57:32,770 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 15:58:37] 2025-10-14 19:57:32,771 | INFO     | collected zombie processes
[2025-10-14 15:58:37] 2025-10-14 19:57:32,771 | INFO     | will attempt to kill all subprocesses of pid=3206717
[2025-10-14 15:58:37] 2025-10-14 19:57:33,239 | INFO     | process IDs to be killed: [3206717] (in reverse order)
[2025-10-14 15:58:37] 2025-10-14 19:57:33,448 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 15:58:37] 2025-10-14 19:57:33,449 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 15:58:37] 2025-10-14 19:57:33,473 | INFO     | did not find any defunct processes belonging to 3206717
[2025-10-14 15:58:37] 2025-10-14 19:57:33,491 | INFO     | did not find any defunct processes belonging to 3206717
[2025-10-14 15:58:37] 2025-10-14 19:57:33,492 | INFO     | ready for new job
[2025-10-14 15:58:37] 2025-10-14 19:57:33,492 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 15:58:37] 2025-10-14 19:57:33,494 | INFO     | ***************************************
[2025-10-14 15:58:37] 2025-10-14 19:57:33,494 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 15:58:37] 2025-10-14 19:57:33,494 | INFO     | ***************************************
[2025-10-14 15:58:37] 2025-10-14 19:57:33,494 | INFO     | 
[2025-10-14 15:58:37] 2025-10-14 19:57:33,519 | INFO     | architecture information:
[2025-10-14 15:58:37] 2025-10-14 19:57:33,527 | INFO     | executing command: cat /etc/os-release
[2025-10-14 15:58:37] 2025-10-14 19:57:33,559 | INFO     | cat /etc/os-release:
[2025-10-14 15:58:37] NAME="CentOS Linux"
[2025-10-14 15:58:37] VERSION="7 (Core)"
[2025-10-14 15:58:37] ID="centos"
[2025-10-14 15:58:37] ID_LIKE="rhel fedora"
[2025-10-14 15:58:37] VERSION_ID="7"
[2025-10-14 15:58:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 15:58:37] ANSI_COLOR="0;31"
[2025-10-14 15:58:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 15:58:37] HOME_URL="https://www.centos.org/"
[2025-10-14 15:58:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 15:58:37] 
[2025-10-14 15:58:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 15:58:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 15:58:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 15:58:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 15:58:37] 
[2025-10-14 15:58:37] 2025-10-14 19:57:33,560 | INFO     | ***************************************
[2025-10-14 15:58:37] 2025-10-14 19:57:34,063 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-14 15:58:37] 2025-10-14 19:57:34,162 | INFO     | sufficient remaining disk space (76542902272 B)
[2025-10-14 15:58:37] 2025-10-14 19:57:34,163 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 15:58:37] 2025-10-14 19:57:34,163 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 15:58:37] 2025-10-14 19:57:34,163 | INFO     | update_server=False
[2025-10-14 15:58:37] 2025-10-14 19:57:34,163 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 15:58:37] 2025-10-14 19:57:34,164 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 15:58:37] 2025-10-14 19:57:34,168 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 15:58:37] 2025-10-14 19:57:34,168 | INFO     | aborting loop
[2025-10-14 15:58:37] 2025-10-14 19:57:34,578 | INFO     | all payload control threads have been joined
[2025-10-14 15:58:37] 2025-10-14 19:57:34,882 | INFO     | all data control threads have been joined
[2025-10-14 15:58:37] 2025-10-14 19:57:35,174 | INFO     | [job] retrieve thread has finished
[2025-10-14 15:58:37] 2025-10-14 19:57:35,175 | INFO     | [job] job monitor thread has finished
[2025-10-14 15:58:37] 2025-10-14 19:57:35,327 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 15:58:37] 2025-10-14 19:57:35,370 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 15:58:37] 2025-10-14 19:57:35,584 | INFO     | [payload] control thread has finished
[2025-10-14 15:58:37] 2025-10-14 19:57:35,672 | INFO     | all job control threads have been joined
[2025-10-14 15:58:37] 2025-10-14 19:57:35,814 | INFO     | [job] validate thread has finished
[2025-10-14 15:58:37] 2025-10-14 19:57:35,822 | INFO     | [data] copytool_in thread has finished
[2025-10-14 15:58:37] 2025-10-14 19:57:35,883 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 15:58:37] 2025-10-14 19:57:35,885 | INFO     | [payload] validate_post thread has finished
[2025-10-14 15:58:37] 2025-10-14 19:57:35,888 | INFO     | [data] control thread has finished
[2025-10-14 15:58:37] 2025-10-14 19:57:36,036 | INFO     | [payload] failed_post thread has finished
[2025-10-14 15:58:37] 2025-10-14 19:57:36,171 | INFO     | [data] copytool_out thread has finished
[2025-10-14 15:58:37] 2025-10-14 19:57:36,602 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 15:58:37] 2025-10-14 19:57:36,644 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 15:58:37] 2025-10-14 19:57:36,678 | INFO     | [job] control thread has finished
[2025-10-14 15:58:37] 2025-10-14 19:57:37,608 | INFO     | [job] queue monitor thread has finished
[2025-10-14 15:58:37] 2025-10-14 19:57:40,652 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 15:58:37] 2025-10-14 19:57:44,723 | INFO     | job.realtimelogging is not enabled
[2025-10-14 15:58:37] 2025-10-14 19:57:45,729 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 15:58:37] 2025-10-14 19:58:03,667 | INFO     | PID=3197267 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 15:58:37] 2025-10-14 19:58:03,667 | INFO     | .. there are 34 such processes running
[2025-10-14 15:58:37] 2025-10-14 19:58:03,668 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 15:58:37] 2025-10-14 19:58:03,668 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 15:58:37] 2025-10-14 19:58:03,669 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 15:58:37] 2025-10-14 19:58:29,758 | INFO     | [monitor] cgroup control has ended
[2025-10-14 15:58:37] 2025-10-14 19:58:31,508 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140149937706816)>', '<ExcThread(monitor, started 140149430130432)>']
[2025-10-14 15:58:37] 2025-10-14 19:58:31,827 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 15:58:37] 2025-10-14 19:58:31,827 | INFO     | [monitor] control thread has ended
[2025-10-14 15:58:37] 2025-10-14 19:58:36,534 | INFO     | all workflow threads have been joined
[2025-10-14 15:58:37] 2025-10-14 19:58:36,537 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 15:58:37] 2025-10-14 19:58:36,537 | INFO     | traces error code: 0
[2025-10-14 15:58:37] 2025-10-14 19:58:36,537 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 15:58:37] 2025-10-14 19:58:36,795 [wrapper] ==== pilot stdout END ====
[2025-10-14 15:58:37] 2025-10-14 19:58:36,799 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 15:58:37] 2025-10-14 19:58:36,803 [wrapper] pilotpid: 3197267
[2025-10-14 15:58:37] 2025-10-14 19:58:36,806 [wrapper] Pilot exit status: 0
[2025-10-14 15:58:37] 2025-10-14 19:58:36,855 [wrapper] pandaids: 6844549005
[2025-10-14 15:58:37] 2025-10-14 19:58:37,109 [wrapper] cleanup supervisor_pilot 3736416 3197268
[2025-10-14 15:58:37] 2025-10-14 19:58:37,116 [wrapper] Test setup, not cleaning
[2025-10-14 15:58:37] 2025-10-14 19:58:37,145 [wrapper] apfmon messages muted
[2025-10-14 15:58:37] 2025-10-14 19:58:37,165 [wrapper] ==== wrapper stdout END ====
[2025-10-14 15:58:37] 2025-10-14 19:58:37,201 [wrapper] ==== wrapper stderr END ====
[2025-10-14 15:58:37]  *** Error codes and diagnostics ***
[2025-10-14 15:58:37]     "exeErrorCode": 0,
[2025-10-14 15:58:37]     "exeErrorDiag": "",
[2025-10-14 15:58:37]     "pilotErrorCode": 0,
[2025-10-14 15:58:37]     "pilotErrorDiag": "",
[2025-10-14 15:58:37]  *** Listing of results directory ***
[2025-10-14 15:58:37] total 409552
[2025-10-14 15:58:37] -rw-r--r--. 1 boincer umatlas    557409 Oct 14 13:17 pilot3.tar.gz
[2025-10-14 15:58:37] -rwx------. 1 boincer umatlas     36292 Oct 14 13:43 runpilot2-wrapper.sh
[2025-10-14 15:58:37] -rw-r--r--. 1 boincer umatlas      5112 Oct 14 13:43 queuedata.json
[2025-10-14 15:58:37] -rw-r--r--. 1 boincer umatlas       100 Oct 14 13:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 15:58:37] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 14 13:43 run_atlas
[2025-10-14 15:58:37] -rw-r--r--. 1 boincer umatlas       105 Oct 14 13:43 job.xml
[2025-10-14 15:58:37] -rw-r--r--. 2 boincer umatlas 219703965 Oct 14 13:44 EVNT.46676267._003508.pool.root.1
[2025-10-14 15:58:37] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 13:44 start_atlas.sh
[2025-10-14 15:58:37] drwxrwx--x. 2 boincer umatlas      4096 Oct 14 13:44 shared
[2025-10-14 15:58:37] -rw-r--r--. 2 boincer umatlas    569683 Oct 14 13:44 input.tar.gz
[2025-10-14 15:58:37] -rw-r--r--. 1 boincer umatlas         0 Oct 14 13:44 boinc_lockfile
[2025-10-14 15:58:37] -rw-r--r--. 1 boincer umatlas      2549 Oct 14 13:44 pandaJob.out
[2025-10-14 15:58:37] -rw-------. 1 boincer umatlas    973983 Oct 14 13:44 agis_schedconf.cvmfs.json
[2025-10-14 15:58:37] -rw-------. 1 boincer umatlas   1560740 Oct 14 13:44 agis_ddmendpoints.agis.ALL.json
[2025-10-14 15:58:37] drwx------. 5 boincer umatlas      4096 Oct 14 13:44 pilot3
[2025-10-14 15:58:37] -rw-r--r--. 1 boincer umatlas      6856 Oct 14 15:56 init_data.xml
[2025-10-14 15:58:37] -rw-------. 1 boincer umatlas 192787355 Oct 14 15:56 HITS.46676269._097236.pool.root.1
[2025-10-14 15:58:37] -rw-r--r--. 1 boincer umatlas       530 Oct 14 15:56 boinc_task_state.xml
[2025-10-14 15:58:37] -rw-------. 1 boincer umatlas      1043 Oct 14 15:57 memory_monitor_summary.json
[2025-10-14 15:58:37] -rw-------. 1 boincer umatlas    405644 Oct 14 15:57 log.46676269._097236.job.log.tgz.1
[2025-10-14 15:58:37] -rw-------. 1 boincer umatlas      7828 Oct 14 15:57 heartbeat.json
[2025-10-14 15:58:37] -rw-------. 1 boincer umatlas        95 Oct 14 15:58 pilot_heartbeat.json
[2025-10-14 15:58:37] -rw-r--r--. 1 boincer umatlas      8192 Oct 14 15:58 boinc_mmap_file
[2025-10-14 15:58:37] -rw-r--r--. 1 boincer umatlas        27 Oct 14 15:58 wrapper_checkpoint.txt
[2025-10-14 15:58:37] -rw-------. 1 boincer umatlas      4896 Oct 14 15:58 pilotlog.txt
[2025-10-14 15:58:37] -rw-------. 1 boincer umatlas   1090995 Oct 14 15:58 log.46676269._097236.job.log.1
[2025-10-14 15:58:37] -rw-------. 1 boincer umatlas       357 Oct 14 15:58 output.list
[2025-10-14 15:58:37] -rw-r--r--. 1 boincer umatlas       620 Oct 14 15:58 runtime_log
[2025-10-14 15:58:37] -rw-------. 1 boincer umatlas   1515520 Oct 14 15:58 result.tar.gz
[2025-10-14 15:58:37] -rw-------. 1 boincer umatlas       654 Oct 14 15:58 TeIKDmhEyS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmqmVMDm4k7p9m.diag
[2025-10-14 15:58:37] -rw-r--r--. 1 boincer umatlas      8708 Oct 14 15:58 runtime_log.err
[2025-10-14 15:58:37] -rw-r--r--. 1 boincer umatlas     20961 Oct 14 15:58 stderr.txt
[2025-10-14 15:58:37] HITS file was successfully produced:
[2025-10-14 15:58:37] -rw-------. 1 boincer umatlas 192787355 Oct 14 15:56 shared/HITS.pool.root.1
[2025-10-14 15:58:37]  *** Contents of shared directory: ***
[2025-10-14 15:58:37] total 404884
[2025-10-14 15:58:37] -rw-r--r--. 2 boincer umatlas 219703965 Oct 14 13:44 ATLAS.root_0
[2025-10-14 15:58:37] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 13:44 start_atlas.sh
[2025-10-14 15:58:37] -rw-r--r--. 2 boincer umatlas    569683 Oct 14 13:44 input.tar.gz
[2025-10-14 15:58:37] -rw-------. 1 boincer umatlas 192787355 Oct 14 15:56 HITS.pool.root.1
[2025-10-14 15:58:37] -rw-------. 1 boincer umatlas   1515520 Oct 14 15:58 result.tar.gz
15:58:39 (3191146): run_atlas exited; CPU time 44919.067102
15:58:39 (3191146): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN