Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:21:07 (3829190): wrapper (7.7.26015): starting
12:21:07 (3829190): wrapper: running run_atlas (--nthreads 10)
[2025-10-14 12:21:07] Arguments: --nthreads 10
[2025-10-14 12:21:07] Threads: 10
[2025-10-14 12:21:07] Checking for CVMFS
[2025-10-14 12:21:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 12:21:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 12:21:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 12:21:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 12:21:08] 2.13.2.0 1643581 132373 542120 151594 -4117 1497 26934117 40960000 24164 16776704 0 497689234 99.777 300595630 17517 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-14 12:21:08] CVMFS is ok
[2025-10-14 12:21:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 12:21:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 12:21:08] Further information can be found at the LHC@home message board.
[2025-10-14 12:21:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 12:21:08] Checking for apptainer binary...
[2025-10-14 12:21:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 12:21:08] Running /usr/bin/apptainer --version
[2025-10-14 12:21:08] apptainer version 1.4.3-1.el9
[2025-10-14 12:21:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 12:21:08] c7-3-35.aglt2.org
[2025-10-14 12:21:08] apptainer works
[2025-10-14 12:21:08] Set ATHENA_PROC_NUMBER=10
[2025-10-14 12:21:08] Set ATHENA_CORE_NUMBER=10
[2025-10-14 12:21:08] Starting ATLAS job with PandaID=6833425099
[2025-10-14 12:21:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 14:41:42]  *** The last 200 lines of the pilot log: ***
[2025-10-14 14:41:42] 2025-10-14 18:40:39,171 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 14:41:42] 2025-10-14 18:40:39,171 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 14:41:42] 2025-10-14 18:40:39,173 | INFO     | fitting pss+swap vs Time
[2025-10-14 14:41:42] 2025-10-14 18:40:39,183 | INFO     | sum of square deviations: 797300257.970806
[2025-10-14 14:41:42] 2025-10-14 18:40:39,184 | INFO     | sum of deviations: 15538936316.240871
[2025-10-14 14:41:42] 2025-10-14 18:40:39,184 | INFO     | mean x: 1760463061.0145986
[2025-10-14 14:41:42] 2025-10-14 18:40:39,184 | INFO     | mean y: 2335547.3795620436
[2025-10-14 14:41:42] 2025-10-14 18:40:39,184 | INFO     | -- intersect: -34308105367.09205
[2025-10-14 14:41:42] 2025-10-14 18:40:39,184 | INFO     | intersect: -34308105367.09205
[2025-10-14 14:41:42] 2025-10-14 18:40:39,184 | INFO     | chi2: 2.420922479898614
[2025-10-14 14:41:42] 2025-10-14 18:40:39,185 | INFO     | sum of square deviations: 713150452.9697001
[2025-10-14 14:41:42] 2025-10-14 18:40:39,185 | INFO     | sum of deviations: 24504103996.09089
[2025-10-14 14:41:42] 2025-10-14 18:40:39,185 | INFO     | mean x: 1760462908.5151515
[2025-10-14 14:41:42] 2025-10-14 18:40:39,185 | INFO     | mean y: 2351332.2045454546
[2025-10-14 14:41:42] 2025-10-14 18:40:39,186 | INFO     | -- intersect: -60487782288.09726
[2025-10-14 14:41:42] 2025-10-14 18:40:39,186 | INFO     | intersect: -60487782288.09726
[2025-10-14 14:41:42] 2025-10-14 18:40:39,186 | INFO     | chi2: 1.6665672261559952
[2025-10-14 14:41:42] 2025-10-14 18:40:39,186 | INFO     | current chi2=1.6665672261559952 (change=31.159826884428398 %)
[2025-10-14 14:41:42] 2025-10-14 18:40:39,186 | INFO     | sum of square deviations: 635140297.9685051
[2025-10-14 14:41:42] 2025-10-14 18:40:39,206 | INFO     | sum of deviations: 23665727948.377956
[2025-10-14 14:41:42] 2025-10-14 18:40:39,206 | INFO     | mean x: 1760462756.015748
[2025-10-14 14:41:42] 2025-10-14 18:40:39,206 | INFO     | mean y: 2349658.811023622
[2025-10-14 14:41:42] 2025-10-14 18:40:39,206 | INFO     | -- intersect: -65593602574.70055
[2025-10-14 14:41:42] 2025-10-14 18:40:39,206 | INFO     | intersect: -65593602574.70055
[2025-10-14 14:41:42] 2025-10-14 18:40:39,206 | INFO     | chi2: 1.6647832472184565
[2025-10-14 14:41:42] 2025-10-14 18:40:39,207 | INFO     | current chi2=1.6647832472184565 (change=0.10704512302533975 %)
[2025-10-14 14:41:42] 2025-10-14 18:40:39,207 | INFO     | right removable region: 126
[2025-10-14 14:41:42] 2025-10-14 18:40:39,207 | INFO     | sum of square deviations: 713149232.9697001
[2025-10-14 14:41:42] 2025-10-14 18:40:39,207 | INFO     | sum of deviations: -7557817132.151515
[2025-10-14 14:41:42] 2025-10-14 18:40:39,207 | INFO     | mean x: 1760463213.5151515
[2025-10-14 14:41:42] 2025-10-14 18:40:39,208 | INFO     | mean y: 2376918.5757575757
[2025-10-14 14:41:42] 2025-10-14 18:40:39,208 | INFO     | -- intersect: 18659424308.532955
[2025-10-14 14:41:42] 2025-10-14 18:40:39,208 | INFO     | intersect: 18659424308.532955
[2025-10-14 14:41:42] 2025-10-14 18:40:39,208 | INFO     | chi2: 0.8291406427374731
[2025-10-14 14:41:42] 2025-10-14 18:40:39,208 | INFO     | current chi2=0.8291406427374731 (change=65.7510453299522 %)
[2025-10-14 14:41:42] 2025-10-14 18:40:39,208 | INFO     | sum of square deviations: 635137857.9685051
[2025-10-14 14:41:42] 2025-10-14 18:40:39,209 | INFO     | sum of deviations: -9846619163.062992
[2025-10-14 14:41:42] 2025-10-14 18:40:39,209 | INFO     | mean x: 1760463366.015748
[2025-10-14 14:41:42] 2025-10-14 18:40:39,209 | INFO     | mean y: 2381395.031496063
[2025-10-14 14:41:42] 2025-10-14 18:40:39,209 | INFO     | -- intersect: 27295058249.66897
[2025-10-14 14:41:42] 2025-10-14 18:40:39,209 | INFO     | intersect: 27295058249.66897
[2025-10-14 14:41:42] 2025-10-14 18:40:39,209 | INFO     | chi2: 0.8125708305673837
[2025-10-14 14:41:42] 2025-10-14 18:40:39,209 | INFO     | current chi2=0.8125708305673837 (change=1.9984320290201818 %)
[2025-10-14 14:41:42] 2025-10-14 18:40:39,209 | INFO     | left removable region: 20
[2025-10-14 14:41:42] 2025-10-14 18:40:39,209 | INFO     | sum of square deviations: 369289274.4622636
[2025-10-14 14:41:42] 2025-10-14 18:40:39,210 | INFO     | sum of deviations: -1253997101.7641501
[2025-10-14 14:41:42] 2025-10-14 18:40:39,210 | INFO     | mean x: 1760463335.518868
[2025-10-14 14:41:42] 2025-10-14 18:40:39,210 | INFO     | mean y: 2402005.632075472
[2025-10-14 14:41:42] 2025-10-14 18:40:39,210 | INFO     | -- intersect: 5980414564.261904
[2025-10-14 14:41:42] 2025-10-14 18:40:39,210 | INFO     | intersect: 5980414564.261904
[2025-10-14 14:41:42] 2025-10-14 18:40:39,210 | INFO     | chi2: 0.030155725022376213
[2025-10-14 14:41:42] 2025-10-14 18:40:39,211 | INFO     | -- intersect: 5980414564.261904
[2025-10-14 14:41:42] 2025-10-14 18:40:39,211 | INFO     | current memory leak: -3.40 B/s (using 106 data points, chi2=0.03)
[2025-10-14 14:41:42] 2025-10-14 18:40:39,211 | INFO     | could have reported an average CPU frequency of 3001 MHz (8 samples)
[2025-10-14 14:41:42] 2025-10-14 18:40:39,211 | INFO     | ..............................
[2025-10-14 14:41:42] 2025-10-14 18:40:39,211 | INFO     | . Timing measurements:
[2025-10-14 14:41:42] 2025-10-14 18:40:39,211 | INFO     | . get job = 0 s
[2025-10-14 14:41:42] 2025-10-14 18:40:39,211 | INFO     | . initial setup = 2 s
[2025-10-14 14:41:42] 2025-10-14 18:40:39,212 | INFO     | . payload setup = 7 s
[2025-10-14 14:41:42] 2025-10-14 18:40:39,212 | INFO     | . stage-in = 0 s
[2025-10-14 14:41:42] 2025-10-14 18:40:39,212 | INFO     | . payload execution = 8310 s
[2025-10-14 14:41:42] 2025-10-14 18:40:39,212 | INFO     | . stage-out = 1 s
[2025-10-14 14:41:42] 2025-10-14 18:40:39,212 | INFO     | . log creation = 0 s
[2025-10-14 14:41:42] 2025-10-14 18:40:39,212 | INFO     | ..............................
[2025-10-14 14:41:42] 2025-10-14 18:40:39,399 | INFO     | 
[2025-10-14 14:41:42] 2025-10-14 18:40:39,399 | INFO     | job summary report
[2025-10-14 14:41:42] 2025-10-14 18:40:39,400 | INFO     | --------------------------------------------------
[2025-10-14 14:41:42] 2025-10-14 18:40:39,400 | INFO     | PanDA job id: 6833425099
[2025-10-14 14:41:42] 2025-10-14 18:40:39,400 | INFO     | task id: 46376905
[2025-10-14 14:41:42] 2025-10-14 18:40:39,400 | INFO     | errors: (none)
[2025-10-14 14:41:42] 2025-10-14 18:40:39,400 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 14:41:42] 2025-10-14 18:40:39,400 | INFO     | pilot state: finished 
[2025-10-14 14:41:42] 2025-10-14 18:40:39,400 | INFO     | transexitcode: 0
[2025-10-14 14:41:42] 2025-10-14 18:40:39,400 | INFO     | exeerrorcode: 0
[2025-10-14 14:41:42] 2025-10-14 18:40:39,400 | INFO     | exeerrordiag: 
[2025-10-14 14:41:42] 2025-10-14 18:40:39,400 | INFO     | exitcode: 0
[2025-10-14 14:41:42] 2025-10-14 18:40:39,400 | INFO     | exitmsg: OK
[2025-10-14 14:41:42] 2025-10-14 18:40:39,400 | INFO     | cpuconsumptiontime: 29977 s
[2025-10-14 14:41:42] 2025-10-14 18:40:39,400 | INFO     | nevents: 400
[2025-10-14 14:41:42] 2025-10-14 18:40:39,401 | INFO     | neventsw: 0
[2025-10-14 14:41:42] 2025-10-14 18:40:39,401 | INFO     | pid: 3851167
[2025-10-14 14:41:42] 2025-10-14 18:40:39,401 | INFO     | pgrp: 3851167
[2025-10-14 14:41:42] 2025-10-14 18:40:39,401 | INFO     | corecount: 10
[2025-10-14 14:41:42] 2025-10-14 18:40:39,401 | INFO     | event service: False
[2025-10-14 14:41:42] 2025-10-14 18:40:39,401 | INFO     | sizes: {0: 2348884, 6: 2349146, 11: 2349174, 8319: 2376972, 8321: 2385970, 8324: 2386026, 8340: 2386348}
[2025-10-14 14:41:42] 2025-10-14 18:40:39,401 | INFO     | --------------------------------------------------
[2025-10-14 14:41:42] 2025-10-14 18:40:39,401 | INFO     | 
[2025-10-14 14:41:42] 2025-10-14 18:40:39,401 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-14 14:41:42] 2025-10-14 18:40:39,511 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 14:41:42] 2025-10-14 18:40:39,511 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 14:41:42] 2025-10-14 18:40:39,511 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 14:41:42] 2025-10-14 18:40:39,511 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 14:41:42] 2025-10-14 18:40:39,511 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 14:41:42] 2025-10-14 18:40:39,511 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 14:41:42] 2025-10-14 18:40:39,511 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 14:41:42] 2025-10-14 18:40:39,511 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 14:41:42] 2025-10-14 18:40:39,512 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 14:41:42] 2025-10-14 18:40:39,512 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 14:41:42] 2025-10-14 18:40:39,512 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 14:41:42] 2025-10-14 18:40:39,512 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 14:41:42] 2025-10-14 18:40:39,512 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 14:41:42] 2025-10-14 18:40:39,512 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 14:41:42] 2025-10-14 18:40:39,512 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 14:41:42] 2025-10-14 18:40:39,512 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 14:41:42] 2025-10-14 18:40:39,512 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 14:41:42] 2025-10-14 18:40:39,512 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 14:41:42] 2025-10-14 18:40:39,512 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 14:41:42] 2025-10-14 18:40:39,512 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 14:41:42] 2025-10-14 18:40:39,513 | INFO     | job 6833425099 has completed (purged errors)
[2025-10-14 14:41:42] 2025-10-14 18:40:39,513 | INFO     | overall cleanup function is called
[2025-10-14 14:41:42] 2025-10-14 18:40:40,538 | INFO     | --- collectZombieJob: --- 10, [3851167]
[2025-10-14 14:41:42] 2025-10-14 18:40:40,539 | INFO     | zombie collector waiting for pid 3851167
[2025-10-14 14:41:42] 2025-10-14 18:40:40,539 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 14:41:42] 2025-10-14 18:40:40,539 | INFO     | collected zombie processes
[2025-10-14 14:41:42] 2025-10-14 18:40:40,539 | INFO     | will attempt to kill all subprocesses of pid=3851167
[2025-10-14 14:41:42] 2025-10-14 18:40:42,177 | INFO     | process IDs to be killed: [3851167] (in reverse order)
[2025-10-14 14:41:42] 2025-10-14 18:40:42,393 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 14:41:42] 2025-10-14 18:40:42,393 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 14:41:42] 2025-10-14 18:40:42,449 | INFO     | did not find any defunct processes belonging to 3851167
[2025-10-14 14:41:42] 2025-10-14 18:40:42,498 | INFO     | did not find any defunct processes belonging to 3851167
[2025-10-14 14:41:42] 2025-10-14 18:40:42,499 | INFO     | ready for new job
[2025-10-14 14:41:42] 2025-10-14 18:40:42,499 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 14:41:42] 2025-10-14 18:40:42,501 | INFO     | ***************************************
[2025-10-14 14:41:42] 2025-10-14 18:40:42,501 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-14 14:41:42] 2025-10-14 18:40:42,501 | INFO     | ***************************************
[2025-10-14 14:41:42] 2025-10-14 18:40:42,501 | INFO     | 
[2025-10-14 14:41:42] 2025-10-14 18:40:42,525 | INFO     | architecture information:
[2025-10-14 14:41:42] 2025-10-14 18:40:42,527 | INFO     | executing command: cat /etc/os-release
[2025-10-14 14:41:42] 2025-10-14 18:40:42,584 | INFO     | cat /etc/os-release:
[2025-10-14 14:41:42] NAME="CentOS Linux"
[2025-10-14 14:41:42] VERSION="7 (Core)"
[2025-10-14 14:41:42] ID="centos"
[2025-10-14 14:41:42] ID_LIKE="rhel fedora"
[2025-10-14 14:41:42] VERSION_ID="7"
[2025-10-14 14:41:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 14:41:42] ANSI_COLOR="0;31"
[2025-10-14 14:41:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 14:41:42] HOME_URL="https://www.centos.org/"
[2025-10-14 14:41:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 14:41:42] 
[2025-10-14 14:41:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 14:41:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 14:41:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 14:41:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 14:41:42] 
[2025-10-14 14:41:42] 2025-10-14 18:40:42,584 | INFO     | ***************************************
[2025-10-14 14:41:42] 2025-10-14 18:40:43,088 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-14 14:41:42] 2025-10-14 18:40:43,184 | INFO     | sufficient remaining disk space (128838533120 B)
[2025-10-14 14:41:42] 2025-10-14 18:40:43,184 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 14:41:42] 2025-10-14 18:40:43,184 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 14:41:42] 2025-10-14 18:40:43,184 | INFO     | update_server=False
[2025-10-14 14:41:42] 2025-10-14 18:40:43,184 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 14:41:42] 2025-10-14 18:40:43,185 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 14:41:42] 2025-10-14 18:40:43,368 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 14:41:42] 2025-10-14 18:40:43,715 | INFO     | all payload control threads have been joined
[2025-10-14 14:41:42] 2025-10-14 18:40:43,801 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 14:41:42] 2025-10-14 18:40:43,803 | INFO     | aborting loop
[2025-10-14 14:41:42] 2025-10-14 18:40:44,033 | INFO     | all data control threads have been joined
[2025-10-14 14:41:42] 2025-10-14 18:40:44,170 | INFO     | all job control threads have been joined
[2025-10-14 14:41:42] 2025-10-14 18:40:44,190 | INFO     | [job] retrieve thread has finished
[2025-10-14 14:41:42] 2025-10-14 18:40:44,415 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 14:41:42] 2025-10-14 18:40:44,432 | INFO     | [payload] failed_post thread has finished
[2025-10-14 14:41:42] 2025-10-14 18:40:44,444 | INFO     | [data] copytool_in thread has finished
[2025-10-14 14:41:42] 2025-10-14 18:40:44,653 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 14:41:42] 2025-10-14 18:40:44,721 | INFO     | [payload] control thread has finished
[2025-10-14 14:41:42] 2025-10-14 18:40:44,808 | INFO     | [job] job monitor thread has finished
[2025-10-14 14:41:42] 2025-10-14 18:40:44,933 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 14:41:42] 2025-10-14 18:40:45,039 | INFO     | [data] control thread has finished
[2025-10-14 14:41:42] 2025-10-14 18:40:45,176 | INFO     | [job] control thread has finished
[2025-10-14 14:41:42] 2025-10-14 18:40:45,278 | INFO     | [job] validate thread has finished
[2025-10-14 14:41:42] 2025-10-14 18:40:45,305 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 14:41:42] 2025-10-14 18:40:45,378 | INFO     | [data] copytool_out thread has finished
[2025-10-14 14:41:42] 2025-10-14 18:40:45,421 | INFO     | [job] queue monitor thread has finished
[2025-10-14 14:41:42] 2025-10-14 18:40:45,445 | INFO     | [payload] validate_post thread has finished
[2025-10-14 14:41:42] 2025-10-14 18:40:47,194 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 14:41:42] 2025-10-14 18:40:53,762 | INFO     | job.realtimelogging is not enabled
[2025-10-14 14:41:42] 2025-10-14 18:40:54,768 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 14:41:42] 2025-10-14 18:41:12,437 | INFO     | PID=3832872 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 14:41:42] 2025-10-14 18:41:12,437 | INFO     | .. there are 31 such processes running
[2025-10-14 14:41:42] 2025-10-14 18:41:12,438 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 14:41:42] 2025-10-14 18:41:12,438 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 14:41:42] 2025-10-14 18:41:12,438 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 14:41:42] 2025-10-14 18:41:36,364 | INFO     | [monitor] cgroup control has ended
[2025-10-14 14:41:42] 2025-10-14 18:41:37,043 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140340663678784)>', '<ExcThread(monitor, started 140340170307328)>']
[2025-10-14 14:41:42] 2025-10-14 18:41:37,587 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 14:41:42] 2025-10-14 18:41:37,588 | INFO     | [monitor] control thread has ended
[2025-10-14 14:41:42] 2025-10-14 18:41:42,069 | INFO     | all workflow threads have been joined
[2025-10-14 14:41:42] 2025-10-14 18:41:42,070 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 14:41:42] 2025-10-14 18:41:42,070 | INFO     | traces error code: 0
[2025-10-14 14:41:42] 2025-10-14 18:41:42,070 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 14:41:42] 2025-10-14 18:41:42,326 [wrapper] ==== pilot stdout END ====
[2025-10-14 14:41:42] 2025-10-14 18:41:42,331 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 14:41:42] 2025-10-14 18:41:42,338 [wrapper] pilotpid: 3832872
[2025-10-14 14:41:42] 2025-10-14 18:41:42,345 [wrapper] Pilot exit status: 0
[2025-10-14 14:41:42] 2025-10-14 18:41:42,396 [wrapper] pandaids: 6833425099
[2025-10-14 14:41:42] 2025-10-14 18:41:42,553 [wrapper] cleanup supervisor_pilot  501358 3832873
[2025-10-14 14:41:42] 2025-10-14 18:41:42,564 [wrapper] Test setup, not cleaning
[2025-10-14 14:41:42] 2025-10-14 18:41:42,592 [wrapper] apfmon messages muted
[2025-10-14 14:41:42] 2025-10-14 18:41:42,611 [wrapper] ==== wrapper stdout END ====
[2025-10-14 14:41:42] 2025-10-14 18:41:42,617 [wrapper] ==== wrapper stderr END ====
[2025-10-14 14:41:42]  *** Error codes and diagnostics ***
[2025-10-14 14:41:42]     "exeErrorCode": 0,
[2025-10-14 14:41:42]     "exeErrorDiag": "",
[2025-10-14 14:41:42]     "pilotErrorCode": 0,
[2025-10-14 14:41:42]     "pilotErrorDiag": "",
[2025-10-14 14:41:42]  *** Listing of results directory ***
[2025-10-14 14:41:42] total 389080
[2025-10-14 14:41:42] -rw-r--r--. 1 boincer umatlas    552446 Oct  7 04:37 pilot3.tar.gz
[2025-10-14 14:41:42] -rwx------. 1 boincer umatlas     36292 Oct  7 04:48 runpilot2-wrapper.sh
[2025-10-14 14:41:42] -rw-r--r--. 1 boincer umatlas      5112 Oct  7 04:48 queuedata.json
[2025-10-14 14:41:42] -rw-r--r--. 1 boincer umatlas       100 Oct 14 12:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 14:41:42] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 14 12:21 run_atlas
[2025-10-14 14:41:42] -rw-r--r--. 1 boincer umatlas       105 Oct 14 12:21 job.xml
[2025-10-14 14:41:42] -rw-r--r--. 2 boincer umatlas 212956507 Oct 14 12:21 EVNT.46376901._004889.pool.root.1
[2025-10-14 14:41:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 12:21 start_atlas.sh
[2025-10-14 14:41:42] drwxrwx--x. 2 boincer umatlas      4096 Oct 14 12:21 shared
[2025-10-14 14:41:42] -rw-r--r--. 2 boincer umatlas    565605 Oct 14 12:21 input.tar.gz
[2025-10-14 14:41:42] -rw-r--r--. 1 boincer umatlas         0 Oct 14 12:21 boinc_lockfile
[2025-10-14 14:41:42] -rw-r--r--. 1 boincer umatlas      2521 Oct 14 12:21 pandaJob.out
[2025-10-14 14:41:42] -rw-------. 1 boincer umatlas    975512 Oct 14 12:21 agis_schedconf.cvmfs.json
[2025-10-14 14:41:42] -rw-------. 1 boincer umatlas   1560740 Oct 14 12:21 agis_ddmendpoints.agis.ALL.json
[2025-10-14 14:41:42] drwx------. 4 boincer umatlas      4096 Oct 14 12:21 pilot3
[2025-10-14 14:41:42] -rw-------. 1 boincer umatlas 178450798 Oct 14 14:39 HITS.46376905._131377.pool.root.1
[2025-10-14 14:41:42] -rw-r--r--. 1 boincer umatlas       529 Oct 14 14:39 boinc_task_state.xml
[2025-10-14 14:41:42] -rw-------. 1 boincer umatlas      1044 Oct 14 14:40 memory_monitor_summary.json
[2025-10-14 14:41:42] -rw-------. 1 boincer umatlas    403306 Oct 14 14:40 log.46376905._131377.job.log.tgz.1
[2025-10-14 14:41:42] -rw-r--r--. 1 boincer umatlas      6937 Oct 14 14:40 init_data.xml
[2025-10-14 14:41:42] -rw-------. 1 boincer umatlas        95 Oct 14 14:40 pilot_heartbeat.json
[2025-10-14 14:41:42] -rw-------. 1 boincer umatlas      7796 Oct 14 14:40 heartbeat.json
[2025-10-14 14:41:42] -rw-r--r--. 1 boincer umatlas      8192 Oct 14 14:41 boinc_mmap_file
[2025-10-14 14:41:42] -rw-r--r--. 1 boincer umatlas        27 Oct 14 14:41 wrapper_checkpoint.txt
[2025-10-14 14:41:42] -rw-------. 1 boincer umatlas      4897 Oct 14 14:41 pilotlog.txt
[2025-10-14 14:41:42] -rw-------. 1 boincer umatlas   1152477 Oct 14 14:41 log.46376905._131377.job.log.1
[2025-10-14 14:41:42] -rw-------. 1 boincer umatlas       357 Oct 14 14:41 output.list
[2025-10-14 14:41:42] -rw-r--r--. 1 boincer umatlas       620 Oct 14 14:41 runtime_log
[2025-10-14 14:41:42] -rw-------. 1 boincer umatlas   1576960 Oct 14 14:41 result.tar.gz
[2025-10-14 14:41:42] -rw-r--r--. 1 boincer umatlas      8700 Oct 14 14:41 runtime_log.err
[2025-10-14 14:41:42] -rw-------. 1 boincer umatlas       655 Oct 14 14:41 NaCMDmLYIQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKZWNDmIxSLRo.diag
[2025-10-14 14:41:42] -rw-r--r--. 1 boincer umatlas     20972 Oct 14 14:41 stderr.txt
[2025-10-14 14:41:42] HITS file was successfully produced:
[2025-10-14 14:41:42] -rw-------. 1 boincer umatlas 178450798 Oct 14 14:39 shared/HITS.pool.root.1
[2025-10-14 14:41:42]  *** Contents of shared directory: ***
[2025-10-14 14:41:42] total 384360
[2025-10-14 14:41:42] -rw-r--r--. 2 boincer umatlas 212956507 Oct 14 12:21 ATLAS.root_0
[2025-10-14 14:41:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 12:21 start_atlas.sh
[2025-10-14 14:41:42] -rw-r--r--. 2 boincer umatlas    565605 Oct 14 12:21 input.tar.gz
[2025-10-14 14:41:42] -rw-------. 1 boincer umatlas 178450798 Oct 14 14:39 HITS.pool.root.1
[2025-10-14 14:41:42] -rw-------. 1 boincer umatlas   1576960 Oct 14 14:41 result.tar.gz
14:41:44 (3829190): run_atlas exited; CPU time 30293.676801
14:41:44 (3829190): called boinc_finish(0)

</stderr_txt>
]]>

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