Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-14 21:19:12 (8704): vboxwrapper version 26210
2025-10-14 21:19:12 (8704): BOINC client version: 8.0.2
2025-10-14 21:19:13 (8704): Detected: VirtualBox VboxManage Interface (Version: 7.1.10)
2025-10-14 21:19:13 (8704): Successfully copied 'init_data.xml' to the shared directory.
2025-10-14 21:19:13 (8704): Create VM. (boinc_24fc7479be441fd6, slot#0)
2025-10-14 21:19:14 (8704): Setting Memory Size for VM. (6000MB)
2025-10-14 21:19:14 (8704): Setting CPU Count for VM. (3)
2025-10-14 21:19:14 (8704): Setting Chipset Options for VM.
2025-10-14 21:19:14 (8704): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-14 21:19:15 (8704): Setting Boot Options for VM.
2025-10-14 21:19:15 (8704): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-14 21:19:15 (8704): Enabling VM Network Access.
2025-10-14 21:19:16 (8704): Disabling USB Support for VM.
2025-10-14 21:19:16 (8704): Disabling COM Port Support for VM.
2025-10-14 21:19:16 (8704): Disabling LPT Port Support for VM.
2025-10-14 21:19:16 (8704): Disabling Audio Support for VM.
2025-10-14 21:19:17 (8704): Disabling Clipboard Support for VM.
2025-10-14 21:19:17 (8704): Disabling Drag and Drop Support for VM.
2025-10-14 21:19:17 (8704): Adding storage controller(s) to VM.
2025-10-14 21:19:17 (8704): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-14 21:19:18 (8704): Adding VirtualBox Guest Additions to VM.
2025-10-14 21:19:18 (8704): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-14 21:19:18 (8704): forwarding host port 52933 to guest port 80
2025-10-14 21:19:19 (8704): Enabling remote desktop for VM.
2025-10-14 21:19:19 (8704): Enabling shared directory for VM.
2025-10-14 21:19:20 (8704): Starting VM using VBoxManage interface. (boinc_24fc7479be441fd6, slot#0)
2025-10-14 21:19:26 (8704): Successfully started VM. (PID = '4696')
2025-10-14 21:19:26 (8704): Reporting VM Process ID to BOINC.
2025-10-14 21:19:26 (8704): Guest Log: BIOS: VirtualBox 7.1.10
2025-10-14 21:19:26 (8704): Guest Log: CPUID EDX: 0x178bfbff
2025-10-14 21:19:26 (8704): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-14 21:19:26 (8704): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-14 21:19:26 (8704): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-14 21:19:26 (8704): Detected: Web Application Enabled (http://localhost:52933)
2025-10-14 21:19:26 (8704): Detected: Remote Desktop Enabled (localhost:52934)
2025-10-14 21:19:26 (8704): Preference change detected
2025-10-14 21:19:26 (8704): Setting CPU throttle for VM. (100%)
2025-10-14 21:19:26 (8704): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-14 21:19:28 (8704): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-14 21:19:28 (8704): Guest Log: BIOS: Booting from Hard Disk...
2025-10-14 21:19:31 (8704): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-14 21:19:31 (8704): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-14 21:19:31 (8704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-14 21:20:36 (8704): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-14 21:20:36 (8704): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-14 21:20:43 (8704): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-14 21:20:43 (8704): Guest Log: 00:00:00.000167 main     Log opened 2025-10-14T21:20:41.946262000Z
2025-10-14 21:20:43 (8704): Guest Log: 00:00:00.000292 main     OS Product: Linux
2025-10-14 21:20:43 (8704): Guest Log: 00:00:00.000342 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-14 21:20:43 (8704): Guest Log: 00:00:00.000379 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-14 21:20:43 (8704): Guest Log: 00:00:00.000413 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-14 21:20:43 (8704): Guest Log: 00:00:00.000414 main     Process ID: 1351
2025-10-14 21:20:43 (8704): Guest Log: 00:00:00.000415 main     Package type: LINUX_64BITS_GENERIC
2025-10-14 21:20:43 (8704): Guest Log: 00:00:00.001266 main     5.2.32 r132073 started. Verbose level = 0
2025-10-14 21:20:43 (8704): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-14 21:20:43 (8704): Guest Log: [INFO] Mounting shared directory
2025-10-14 21:20:43 (8704): Guest Log: [INFO] Checking for init_data.xml
2025-10-14 21:20:46 (8704): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-14 21:20:46 (8704): Guest Log: [INFO] Detected branch: prod
2025-10-14 21:20:46 (8704): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-14 21:20:46 (8704): Guest Log: Copying input files
2025-10-14 21:20:47 (8704): Guest Log: Copied input files into RunAtlas.
2025-10-14 21:20:47 (8704): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2025-10-14 21:20:53 (8704): Guest Log: 00:00:10.003070 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 194 831 092 000ns (GuestNow=1 760 469 647 117 514 000 ns GuestLast=1 760 476 841 948 606 000 ns fSetTimeLastLoop=true )
2025-10-14 21:20:55 (8704): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-14 21:20:55 (8704): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-14 21:20:55 (8704): Guest Log: 2.6.3.0 1626 0 29604 151708 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2025-10-14 21:20:56 (8704): Guest Log: copied the webapp to /var/www
2025-10-14 21:20:56 (8704): Guest Log: ATHENA_PROC_NUMBER=3
2025-10-14 21:20:56 (8704): Guest Log: ATHENA_CORE_NUMBER=3
2025-10-14 21:20:56 (8704): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-14 21:20:56 (8704): Guest Log:  *** Starting ATLAS job. (PandaID=6832971484 taskID=46376905) ***
2025-10-14 22:59:29 (8704): Status Report: Elapsed Time: '6000.000000'
2025-10-14 22:59:29 (8704): Status Report: CPU Time: '16886.218750'
2025-10-15 00:39:32 (8704): Status Report: Elapsed Time: '12000.000000'
2025-10-15 00:39:32 (8704): Status Report: CPU Time: '34801.421875'
2025-10-15 02:17:51 (8704): Guest Log:  *** Job finished ***
2025-10-15 02:17:51 (8704): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-15 02:17:51 (8704): Guest Log: 2025-10-15 00:17:18,381 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-15 02:17:51 (8704): Guest Log: 2025-10-15 00:17:18,381 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-15 02:17:51 (8704): Guest Log: 2025-10-15 00:17:32,976 | INFO     | [monitor] cgroup control has ended
2025-10-15 02:17:51 (8704): Guest Log: 2025-10-15 00:17:33,555 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140126657890112)>', '<ExcThread(monitor, started 140125791057664)>']
2025-10-15 02:17:51 (8704): Guest Log: 2025-10-15 00:17:33,743 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-15 02:17:51 (8704): Guest Log: 2025-10-15 00:17:33,743 | INFO     | [monitor] control thread has ended
2025-10-15 02:17:51 (8704): Guest Log: 2025-10-15 00:17:38,561 | INFO     | all workflow threads have been joined
2025-10-15 02:17:51 (8704): Guest Log: 2025-10-15 00:17:38,561 | INFO     | end of generic workflow (traces error code: 0)
2025-10-15 02:17:51 (8704): Guest Log: 2025-10-15 00:17:38,561 | INFO     | traces error code: 0
2025-10-15 02:17:51 (8704): Guest Log: 2025-10-15 00:17:38,561 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-15 02:17:51 (8704): Guest Log: 2025-10-15 00:17:38,697 [wrapper] ==== pilot stdout END ====
2025-10-15 02:17:51 (8704): Guest Log: 2025-10-15 00:17:38,702 [wrapper] ==== wrapper stdout RESUME ====
2025-10-15 02:17:51 (8704): Guest Log: 2025-10-15 00:17:38,708 [wrapper] pilotpid: 6021
2025-10-15 02:17:51 (8704): Guest Log: 2025-10-15 00:17:38,713 [wrapper] Pilot exit status: 0
2025-10-15 02:17:51 (8704): Guest Log: 2025-10-15 00:17:38,960 [wrapper] pandaids: 6832971484
2025-10-15 02:17:51 (8704): Guest Log: 2025-10-15 00:17:38,993 [wrapper] cleanup supervisor_pilot 18348 6022
2025-10-15 02:17:51 (8704): Guest Log: 2025-10-15 00:17:38,999 [wrapper] Test setup, not cleaning
2025-10-15 02:17:51 (8704): Guest Log: 2025-10-15 00:17:39,004 [wrapper] apfmon messages muted
2025-10-15 02:17:51 (8704): Guest Log: 2025-10-15 00:17:39,009 [wrapper] ==== wrapper stdout END ====
2025-10-15 02:17:51 (8704): Guest Log: 2025-10-15 00:17:39,013 [wrapper] ==== wrapper stderr END ====
2025-10-15 02:17:51 (8704): Guest Log:  *** Error codes and diagnostics ***
2025-10-15 02:17:51 (8704): Guest Log:     "exeErrorCode": 0,
2025-10-15 02:17:51 (8704): Guest Log:     "exeErrorDiag": "",
2025-10-15 02:17:51 (8704): Guest Log:     "pilotErrorCode": 0,
2025-10-15 02:17:51 (8704): Guest Log:     "pilotErrorDiag": "",
2025-10-15 02:17:51 (8704): Guest Log:  *** Listing of results directory ***
2025-10-15 02:17:51 (8704): Guest Log: total 185640
2025-10-15 02:17:51 (8704): Guest Log: -rw-r--r--. 1 atlas atlas    552446 Oct  6 19:29 pilot3.tar.gz
2025-10-15 02:17:51 (8704): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  6 19:44 queuedata.json
2025-10-15 02:17:51 (8704): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  6 19:46 runpilot2-wrapper.sh
2025-10-15 02:17:51 (8704): Guest Log: -rwxr-xr-x. 1 atlas atlas      9021 Oct 14 19:20 init_data.xml
2025-10-15 02:17:51 (8704): Guest Log: -rwxr-xr-x. 1 atlas atlas    565608 Oct 14 19:20 input.tar.gz
2025-10-15 02:17:51 (8704): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 14 19:20 start_atlas.sh
2025-10-15 02:17:51 (8704): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 14 19:20 EVNT.46376901._002515.pool.root.1 -> /data/./ATLAS.root_0
2025-10-15 02:17:51 (8704): Guest Log: -rw-r--r--. 1 atlas atlas      2519 Oct 14 19:20 pandaJob.out
2025-10-15 02:17:51 (8704): Guest Log: -rw-------. 1 atlas atlas    974007 Oct 14 19:21 agis_schedconf.cvmfs.json
2025-10-15 02:17:51 (8704): Guest Log: drwx------. 4 atlas atlas      4096 Oct 14 19:21 pilot3
2025-10-15 02:17:51 (8704): Guest Log: -rw-------. 1 atlas atlas 180621083 Oct 15 00:16 HITS.46376905._117989.pool.root.1
2025-10-15 02:17:51 (8704): Guest Log: -rw-------. 1 atlas atlas      1030 Oct 15 00:16 memory_monitor_summary.json
2025-10-15 02:17:51 (8704): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 15 00:16 agis_ddmendpoints.agis.ALL.json
2025-10-15 02:17:51 (8704): Guest Log: -rw-------. 1 atlas atlas    436991 Oct 15 00:16 log.46376905._117989.job.log.tgz.1
2025-10-15 02:17:51 (8704): Guest Log: -rw-------. 1 atlas atlas      7788 Oct 15 00:16 heartbeat.json
2025-10-15 02:17:51 (8704): Guest Log: -rw-------. 1 atlas atlas        95 Oct 15 00:17 pilot_heartbeat.json
2025-10-15 02:17:51 (8704): Guest Log: -rw-------. 1 atlas atlas      5107 Oct 15 00:17 pilotlog.txt
2025-10-15 02:17:51 (8704): Guest Log: -rw-------. 1 atlas atlas   2392608 Oct 15 00:17 log.46376905._117989.job.log.1
2025-10-15 02:17:51 (8704): Guest Log: -rw-------. 1 atlas atlas       357 Oct 15 00:17 output.list
2025-10-15 02:17:51 (8704): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 15 00:17 runtime_log
2025-10-15 02:17:51 (8704): Guest Log: -rw-------. 1 atlas atlas   2846720 Oct 15 00:17 result.tar.gz
2025-10-15 02:17:51 (8704): Guest Log: -rw-------. 1 atlas atlas       659 Oct 15 00:17 TqSMDmCL6P8n9Rq4apOajLDm4fhM0noT9bVof3QYDmutJMDmch2msm.diag
2025-10-15 02:17:51 (8704): Guest Log: -rw-r--r--. 1 atlas atlas      8633 Oct 15 00:17 runtime_log.err
2025-10-15 02:17:51 (8704): Guest Log: Looking for outputfile HITS.46376905._117989.pool.root.1
2025-10-15 02:17:51 (8704): Guest Log: HITS file was successfully produced
2025-10-15 02:17:51 (8704): Guest Log: -rw-------. 1 atlas atlas 180621083 Oct 15 00:16 /home/atlas/RunAtlas/HITS.46376905._117989.pool.root.1
2025-10-15 02:17:52 (8704): Guest Log: Successfully finished the ATLAS job!
2025-10-15 02:17:52 (8704): Guest Log: Copying the results back to the shared directory!
2025-10-15 02:17:52 (8704): Guest Log:  *** Contents of shared directory: ***
2025-10-15 02:17:52 (8704): Guest Log: total 388160
2025-10-15 02:17:52 (8704): Guest Log: -rwxrwxrwx. 1 root root 213409516 Oct 14 19:19 ATLAS.root_0
2025-10-15 02:17:52 (8704): Guest Log: -rwxrwxrwx. 1 root root 180621083 Oct 15  2025 HITS.pool.root.1
2025-10-15 02:17:52 (8704): Guest Log: -rwxrwxrwx. 1 root root      9021 Oct 14 19:19 init_data.xml
2025-10-15 02:17:52 (8704): Guest Log: -rwxrwxrwx. 1 root root    565608 Oct 14 15:09 input.tar.gz
2025-10-15 02:17:52 (8704): Guest Log: -rwxrwxrwx. 1 root root   2846720 Oct 15  2025 result.tar.gz
2025-10-15 02:17:52 (8704): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 14 15:09 start_atlas.sh
2025-10-15 02:17:52 (8704): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-15 02:17:52 (8704): VM Completion File Detected.
2025-10-15 02:17:52 (8704): Powering off VM.
2025-10-15 02:17:53 (8704): Successfully stopped VM.
2025-10-15 02:17:53 (8704): Deregistering VM. (boinc_24fc7479be441fd6, slot#0)
2025-10-15 02:17:53 (8704): Removing network bandwidth throttle group from VM.
2025-10-15 02:17:53 (8704): Removing VM from VirtualBox.
2025-10-15 02:17:59 (8704): called boinc_finish(0)

</stderr_txt>
]]>

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