Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:27:20 (27922): wrapper (7.7.26015): starting
10:27:20 (27922): wrapper: running run_atlas (--nthreads 12)
[2025-10-14 10:27:20] Arguments: --nthreads 12
[2025-10-14 10:27:20] Threads: 12
[2025-10-14 10:27:20] Checking for CVMFS
[2025-10-14 10:27:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 10:27:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 10:27:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 10:27:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 10:27:20] 2.11.2.0 2949 225881 98492 151700 2 1 12117084 20275200 1 130560 1 110130378 99.984 12461704 12154 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-14 10:27:20] CVMFS is ok
[2025-10-14 10:27:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 10:27:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 10:27:20] Further information can be found at the LHC@home message board.
[2025-10-14 10:27:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 10:27:20] Checking for apptainer binary...
[2025-10-14 10:27:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 10:27:20] Running /usr/bin/apptainer --version
[2025-10-14 10:27:20] apptainer version 1.3.2-1.el7
[2025-10-14 10:27:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 10:27:22] c-205-13.aglt2.org
[2025-10-14 10:27:22] apptainer works
[2025-10-14 10:27:22] Set ATHENA_PROC_NUMBER=12
[2025-10-14 10:27:22] Set ATHENA_CORE_NUMBER=12
[2025-10-14 10:27:22] Starting ATLAS job with PandaID=6844296935
[2025-10-14 10:27:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 11:40:51]  *** The last 200 lines of the pilot log: ***
[2025-10-14 11:40:51]  status_code=0
[2025-10-14 11:40:51]  storage_token=
[2025-10-14 11:40:51]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6844296935/log.46676269._097213.job.log.tgz.1
[2025-10-14 11:40:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/ba/log.46676269._097213.job.log.tgz.1
[2025-10-14 11:40:51]  workdir=None
[2025-10-14 11:40:51] ]
[2025-10-14 11:40:51] 2025-10-14 15:39:56,001 | INFO     | transferring file log.46676269._097213.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6844296935/log.46676269._097213.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-14 11:40:51] 2025-10-14 15:39:56,001 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6844296935/log.46676269._097213.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._097213.job
[2025-10-14 11:40:51] 2025-10-14 15:39:56,023 | INFO     | adding to output.list: log.46676269._097213.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/ba/log.46676269._097213.job.log.tg
[2025-10-14 11:40:51] 2025-10-14 15:39:56,024 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-14 11:40:51] 2025-10-14 15:39:56,025 | INFO     | summary of transferred files:
[2025-10-14 11:40:51] 2025-10-14 15:39:56,025 | INFO     |  -- lfn=log.46676269._097213.job.log.tgz.1, status_code=0, status=transferred
[2025-10-14 11:40:51] 2025-10-14 15:39:56,025 | INFO     | stage-out finished correctly
[2025-10-14 11:40:51] 2025-10-14 15:39:56,239 | WARNING  | process 6581 can no longer be monitored (due to stat problems) - aborting
[2025-10-14 11:40:51] 2025-10-14 15:39:56,239 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6844296935/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 11:40:51] 2025-10-14 15:39:56,325 | INFO     | number of running child processes to parent process 6581: 1
[2025-10-14 11:40:51] 2025-10-14 15:39:56,325 | INFO     | maximum number of monitored processes: 6
[2025-10-14 11:40:51] 2025-10-14 15:39:57,033 | INFO     | time since job start (4340s) is within the limit (172800.0s)
[2025-10-14 11:40:51] 2025-10-14 15:39:58,093 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-14 11:40:51] 2025-10-14 15:39:58,828 | INFO     | monitor loop #324: job 0:6844296935 is in state 'finished'
[2025-10-14 11:40:51] 2025-10-14 15:39:58,828 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 11:40:51] 2025-10-14 15:39:59,039 | INFO     | time since job start (4342s) is within the limit (172800.0s)
[2025-10-14 11:40:51] 2025-10-14 15:39:59,486 | INFO     | job 6844296935 has state=finished
[2025-10-14 11:40:51] 2025-10-14 15:39:59,486 | INFO     | preparing for final server update for job 6844296935 in state='finished'
[2025-10-14 11:40:51] 2025-10-14 15:39:59,486 | INFO     | this job has now completed (state=finished)
[2025-10-14 11:40:51] 2025-10-14 15:39:59,486 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-14 11:40:51] 2025-10-14 15:39:59,487 | INFO     | log transfer has been attempted: DONE
[2025-10-14 11:40:51] 2025-10-14 15:39:59,487 | INFO     | job 6844296935 has finished - writing final server update
[2025-10-14 11:40:51] 2025-10-14 15:39:59,487 | INFO     | total number of processed events: 400 (read)
[2025-10-14 11:40:51] 2025-10-14 15:39:59,488 | INFO     | executing command: lscpu
[2025-10-14 11:40:51] 2025-10-14 15:39:59,513 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-14 11:40:51] 2025-10-14 15:40:01,044 | INFO     | time since job start (4344s) is within the limit (172800.0s)
[2025-10-14 11:40:51] 2025-10-14 15:40:01,331 | INFO     | monitor loop #325: job 0:6844296935 is in state 'finished'
[2025-10-14 11:40:51] 2025-10-14 15:40:01,332 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 11:40:51] 2025-10-14 15:40:03,050 | INFO     | time since job start (4346s) is within the limit (172800.0s)
[2025-10-14 11:40:51] 2025-10-14 15:40:03,835 | INFO     | monitor loop #326: job 0:6844296935 is in state 'finished'
[2025-10-14 11:40:51] 2025-10-14 15:40:03,835 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 11:40:51] 2025-10-14 15:40:04,093 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-14 11:40:51] 2025-10-14 15:40:04,097 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-10-14 11:40:51] 2025-10-14 15:40:04,099 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6844296935/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 11:40:51] 2025-10-14 15:40:04,100 | INFO     | extracted standard info from prmon json
[2025-10-14 11:40:51] 2025-10-14 15:40:04,100 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 11:40:51] 2025-10-14 15:40:04,100 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 11:40:51] 2025-10-14 15:40:04,101 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 11:40:51] 2025-10-14 15:40:04,101 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 11:40:51] 2025-10-14 15:40:04,102 | INFO     | fitting pss+swap vs Time
[2025-10-14 11:40:51] 2025-10-14 15:40:04,102 | INFO     | sum of square deviations: 81266640.0
[2025-10-14 11:40:51] 2025-10-14 15:40:04,103 | INFO     | sum of deviations: -7372454144.0
[2025-10-14 11:40:51] 2025-10-14 15:40:04,103 | INFO     | mean x: 1760454312.5
[2025-10-14 11:40:51] 2025-10-14 15:40:04,103 | INFO     | mean y: 2852305.125
[2025-10-14 11:40:51] 2025-10-14 15:40:04,103 | INFO     | -- intersect: 159710066624.71906
[2025-10-14 11:40:51] 2025-10-14 15:40:04,103 | INFO     | intersect: 159710066624.71906
[2025-10-14 11:40:51] 2025-10-14 15:40:04,103 | INFO     | chi2: 0.06159207230831749
[2025-10-14 11:40:51] 2025-10-14 15:40:04,103 | INFO     | -- intersect: 159710066624.71906
[2025-10-14 11:40:51] 2025-10-14 15:40:04,104 | INFO     | current memory leak: -90.72 B/s (using 64 data points, chi2=0.06)
[2025-10-14 11:40:51] 2025-10-14 15:40:04,104 | INFO     | could have reported an average CPU frequency of 2023 MHz (6 samples)
[2025-10-14 11:40:51] 2025-10-14 15:40:04,104 | INFO     | ..............................
[2025-10-14 11:40:51] 2025-10-14 15:40:04,104 | INFO     | . Timing measurements:
[2025-10-14 11:40:51] 2025-10-14 15:40:04,104 | INFO     | . get job = 0 s
[2025-10-14 11:40:51] 2025-10-14 15:40:04,104 | INFO     | . initial setup = 2 s
[2025-10-14 11:40:51] 2025-10-14 15:40:04,104 | INFO     | . payload setup = 7 s
[2025-10-14 11:40:51] 2025-10-14 15:40:04,105 | INFO     | . stage-in = 0 s
[2025-10-14 11:40:51] 2025-10-14 15:40:04,105 | INFO     | . payload execution = 4310 s
[2025-10-14 11:40:51] 2025-10-14 15:40:04,105 | INFO     | . stage-out = 0 s
[2025-10-14 11:40:51] 2025-10-14 15:40:04,105 | INFO     | . log creation = 0 s
[2025-10-14 11:40:51] 2025-10-14 15:40:04,105 | INFO     | ..............................
[2025-10-14 11:40:51] 2025-10-14 15:40:04,677 | INFO     | 
[2025-10-14 11:40:51] 2025-10-14 15:40:04,677 | INFO     | job summary report
[2025-10-14 11:40:51] 2025-10-14 15:40:04,677 | INFO     | --------------------------------------------------
[2025-10-14 11:40:51] 2025-10-14 15:40:04,677 | INFO     | PanDA job id: 6844296935
[2025-10-14 11:40:51] 2025-10-14 15:40:04,677 | INFO     | task id: 46676269
[2025-10-14 11:40:51] 2025-10-14 15:40:04,678 | INFO     | errors: (none)
[2025-10-14 11:40:51] 2025-10-14 15:40:04,678 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 11:40:51] 2025-10-14 15:40:04,678 | INFO     | pilot state: finished 
[2025-10-14 11:40:51] 2025-10-14 15:40:04,678 | INFO     | transexitcode: 0
[2025-10-14 11:40:51] 2025-10-14 15:40:04,678 | INFO     | exeerrorcode: 0
[2025-10-14 11:40:51] 2025-10-14 15:40:04,678 | INFO     | exeerrordiag: 
[2025-10-14 11:40:51] 2025-10-14 15:40:04,679 | INFO     | exitcode: 0
[2025-10-14 11:40:51] 2025-10-14 15:40:04,679 | INFO     | exitmsg: OK
[2025-10-14 11:40:51] 2025-10-14 15:40:04,679 | INFO     | cpuconsumptiontime: 46651 s
[2025-10-14 11:40:51] 2025-10-14 15:40:04,679 | INFO     | nevents: 400
[2025-10-14 11:40:51] 2025-10-14 15:40:04,679 | INFO     | neventsw: 0
[2025-10-14 11:40:51] 2025-10-14 15:40:04,679 | INFO     | pid: 6581
[2025-10-14 11:40:51] 2025-10-14 15:40:04,679 | INFO     | pgrp: 6581
[2025-10-14 11:40:51] 2025-10-14 15:40:04,680 | INFO     | corecount: 12
[2025-10-14 11:40:51] 2025-10-14 15:40:04,680 | INFO     | event service: False
[2025-10-14 11:40:51] 2025-10-14 15:40:04,680 | INFO     | sizes: {0: 2348864, 5: 2349126, 11: 2349182, 4321: 2375227, 4322: 2384225, 4324: 2384281, 4330: 2384603}
[2025-10-14 11:40:51] 2025-10-14 15:40:04,680 | INFO     | --------------------------------------------------
[2025-10-14 11:40:51] 2025-10-14 15:40:04,680 | INFO     | 
[2025-10-14 11:40:51] 2025-10-14 15:40:04,680 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-14 11:40:51] 2025-10-14 15:40:04,703 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 11:40:51] 2025-10-14 15:40:04,704 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 11:40:51] 2025-10-14 15:40:04,704 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 11:40:51] 2025-10-14 15:40:04,704 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 11:40:51] 2025-10-14 15:40:04,704 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 11:40:51] 2025-10-14 15:40:04,704 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 11:40:51] 2025-10-14 15:40:04,704 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 11:40:51] 2025-10-14 15:40:04,705 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 11:40:51] 2025-10-14 15:40:04,705 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 11:40:51] 2025-10-14 15:40:04,705 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 11:40:51] 2025-10-14 15:40:04,705 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 11:40:51] 2025-10-14 15:40:04,705 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 11:40:51] 2025-10-14 15:40:04,705 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 11:40:51] 2025-10-14 15:40:04,706 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 11:40:51] 2025-10-14 15:40:04,706 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 11:40:51] 2025-10-14 15:40:04,706 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 11:40:51] 2025-10-14 15:40:04,706 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 11:40:51] 2025-10-14 15:40:04,706 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 11:40:51] 2025-10-14 15:40:04,706 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 11:40:51] 2025-10-14 15:40:04,707 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 11:40:51] 2025-10-14 15:40:04,707 | INFO     | job 6844296935 has completed (purged errors)
[2025-10-14 11:40:51] 2025-10-14 15:40:04,707 | INFO     | overall cleanup function is called
[2025-10-14 11:40:51] 2025-10-14 15:40:05,715 | INFO     | --- collectZombieJob: --- 10, [6581]
[2025-10-14 11:40:51] 2025-10-14 15:40:05,715 | INFO     | zombie collector waiting for pid 6581
[2025-10-14 11:40:51] 2025-10-14 15:40:05,719 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 11:40:51] 2025-10-14 15:40:05,720 | INFO     | collected zombie processes
[2025-10-14 11:40:51] 2025-10-14 15:40:05,720 | INFO     | will attempt to kill all subprocesses of pid=6581
[2025-10-14 11:40:51] 2025-10-14 15:40:05,818 | INFO     | process IDs to be killed: [6581] (in reverse order)
[2025-10-14 11:40:51] 2025-10-14 15:40:05,871 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 11:40:51] 2025-10-14 15:40:05,871 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 11:40:51] 2025-10-14 15:40:05,875 | INFO     | did not find any defunct processes belonging to 6581
[2025-10-14 11:40:51] 2025-10-14 15:40:05,878 | INFO     | did not find any defunct processes belonging to 6581
[2025-10-14 11:40:51] 2025-10-14 15:40:05,878 | INFO     | ready for new job
[2025-10-14 11:40:51] 2025-10-14 15:40:05,878 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 11:40:51] 2025-10-14 15:40:05,879 | INFO     | ***************************************
[2025-10-14 11:40:51] 2025-10-14 15:40:05,879 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 11:40:51] 2025-10-14 15:40:05,880 | INFO     | ***************************************
[2025-10-14 11:40:51] 2025-10-14 15:40:05,880 | INFO     | 
[2025-10-14 11:40:51] 2025-10-14 15:40:05,880 | INFO     | architecture information:
[2025-10-14 11:40:51] 2025-10-14 15:40:05,881 | INFO     | executing command: cat /etc/os-release
[2025-10-14 11:40:51] 2025-10-14 15:40:05,897 | INFO     | cat /etc/os-release:
[2025-10-14 11:40:51] NAME="CentOS Linux"
[2025-10-14 11:40:51] VERSION="7 (Core)"
[2025-10-14 11:40:51] ID="centos"
[2025-10-14 11:40:51] ID_LIKE="rhel fedora"
[2025-10-14 11:40:51] VERSION_ID="7"
[2025-10-14 11:40:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 11:40:51] ANSI_COLOR="0;31"
[2025-10-14 11:40:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 11:40:51] HOME_URL="https://www.centos.org/"
[2025-10-14 11:40:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 11:40:51] 
[2025-10-14 11:40:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 11:40:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 11:40:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 11:40:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 11:40:51] 
[2025-10-14 11:40:51] 2025-10-14 15:40:05,897 | INFO     | ***************************************
[2025-10-14 11:40:51] 2025-10-14 15:40:06,399 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-14 11:40:51] 2025-10-14 15:40:06,417 | INFO     | sufficient remaining disk space (29364322304 B)
[2025-10-14 11:40:51] 2025-10-14 15:40:06,417 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 11:40:51] 2025-10-14 15:40:06,418 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 11:40:51] 2025-10-14 15:40:06,418 | INFO     | update_server=False
[2025-10-14 11:40:51] 2025-10-14 15:40:06,418 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 11:40:51] 2025-10-14 15:40:06,631 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 11:40:51] 2025-10-14 15:40:07,343 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 11:40:51] 2025-10-14 15:40:07,344 | INFO     | aborting loop
[2025-10-14 11:40:51] 2025-10-14 15:40:07,397 | INFO     | all payload control threads have been joined
[2025-10-14 11:40:51] 2025-10-14 15:40:07,399 | INFO     | all data control threads have been joined
[2025-10-14 11:40:51] 2025-10-14 15:40:07,424 | INFO     | [job] retrieve thread has finished
[2025-10-14 11:40:51] 2025-10-14 15:40:07,456 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 11:40:51] 2025-10-14 15:40:07,470 | INFO     | [payload] validate_post thread has finished
[2025-10-14 11:40:51] 2025-10-14 15:40:07,503 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 11:40:51] 2025-10-14 15:40:07,612 | INFO     | [payload] failed_post thread has finished
[2025-10-14 11:40:51] 2025-10-14 15:40:07,741 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 11:40:51] 2025-10-14 15:40:07,909 | INFO     | all job control threads have been joined
[2025-10-14 11:40:51] 2025-10-14 15:40:07,931 | INFO     | [data] copytool_in thread has finished
[2025-10-14 11:40:51] 2025-10-14 15:40:08,196 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 11:40:51] 2025-10-14 15:40:08,349 | INFO     | [job] job monitor thread has finished
[2025-10-14 11:40:51] 2025-10-14 15:40:08,398 | INFO     | [payload] control thread has finished
[2025-10-14 11:40:51] 2025-10-14 15:40:08,405 | INFO     | [data] control thread has finished
[2025-10-14 11:40:51] 2025-10-14 15:40:08,636 | INFO     | [data] copytool_out thread has finished
[2025-10-14 11:40:51] 2025-10-14 15:40:08,670 | INFO     | [job] validate thread has finished
[2025-10-14 11:40:51] 2025-10-14 15:40:08,689 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 11:40:51] 2025-10-14 15:40:08,915 | INFO     | [job] control thread has finished
[2025-10-14 11:40:51] 2025-10-14 15:40:09,200 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 11:40:51] 2025-10-14 15:40:10,205 | INFO     | [job] queue monitor thread has finished
[2025-10-14 11:40:51] 2025-10-14 15:40:12,695 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 11:40:51] 2025-10-14 15:40:36,250 | INFO     | PID=32199 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-14 11:40:51] 2025-10-14 15:40:36,251 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 11:40:51] 2025-10-14 15:40:36,251 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 11:40:51] 2025-10-14 15:40:36,251 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 11:40:51] 2025-10-14 15:40:43,764 | INFO     | [monitor] cgroup control has ended
[2025-10-14 11:40:51] 2025-10-14 15:40:45,750 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139711604815680)>', '<ExcThread(monitor, started 139710563337984)>']
[2025-10-14 11:40:51] 2025-10-14 15:40:46,295 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 11:40:51] 2025-10-14 15:40:46,295 | INFO     | [monitor] control thread has ended
[2025-10-14 11:40:51] 2025-10-14 15:40:50,756 | INFO     | all workflow threads have been joined
[2025-10-14 11:40:51] 2025-10-14 15:40:50,756 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 11:40:51] 2025-10-14 15:40:50,756 | INFO     | traces error code: 0
[2025-10-14 11:40:51] 2025-10-14 15:40:50,756 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 11:40:51] 2025-10-14 15:40:50,851 [wrapper] ==== pilot stdout END ====
[2025-10-14 11:40:51] 2025-10-14 15:40:50,855 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 11:40:51] 2025-10-14 15:40:50,858 [wrapper] pilotpid: 32199
[2025-10-14 11:40:51] 2025-10-14 15:40:50,862 [wrapper] Pilot exit status: 0
[2025-10-14 11:40:51] 2025-10-14 15:40:50,878 [wrapper] pandaids: 6844296935
[2025-10-14 11:40:51] 2025-10-14 15:40:50,925 [wrapper] cleanup supervisor_pilot 12582 32200
[2025-10-14 11:40:51] 2025-10-14 15:40:50,929 [wrapper] Test setup, not cleaning
[2025-10-14 11:40:51] 2025-10-14 15:40:50,933 [wrapper] apfmon messages muted
[2025-10-14 11:40:51] 2025-10-14 15:40:50,937 [wrapper] ==== wrapper stdout END ====
[2025-10-14 11:40:51] 2025-10-14 15:40:50,941 [wrapper] ==== wrapper stderr END ====
[2025-10-14 11:40:51]  *** Error codes and diagnostics ***
[2025-10-14 11:40:51]     "exeErrorCode": 0,
[2025-10-14 11:40:51]     "exeErrorDiag": "",
[2025-10-14 11:40:51]     "pilotErrorCode": 0,
[2025-10-14 11:40:51]     "pilotErrorDiag": "",
[2025-10-14 11:40:51]  *** Listing of results directory ***
[2025-10-14 11:40:51] total 410400
[2025-10-14 11:40:51] -rw-r--r-- 1 boincer umatlas    557409 Oct 14 10:19 pilot3.tar.gz
[2025-10-14 11:40:51] -rwx------ 1 boincer umatlas     36292 Oct 14 10:26 runpilot2-wrapper.sh
[2025-10-14 11:40:51] -rw-r--r-- 1 boincer umatlas      5112 Oct 14 10:26 queuedata.json
[2025-10-14 11:40:51] -rw-r--r-- 1 boincer umatlas       100 Oct 14 10:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 11:40:51] -rwxr-xr-x 1 boincer umatlas      7986 Oct 14 10:27 run_atlas
[2025-10-14 11:40:51] -rw-r--r-- 1 boincer umatlas       105 Oct 14 10:27 job.xml
[2025-10-14 11:40:51] -rw-r--r-- 2 boincer umatlas 220468784 Oct 14 10:27 EVNT.46676267._000175.pool.root.1
[2025-10-14 11:40:51] -rw-r--r-- 2 boincer umatlas     15120 Oct 14 10:27 start_atlas.sh
[2025-10-14 11:40:51] drwxrwx--x 2 boincer umatlas      4096 Oct 14 10:27 shared
[2025-10-14 11:40:51] -rw-r--r-- 2 boincer umatlas    569679 Oct 14 10:27 input.tar.gz
[2025-10-14 11:40:51] -rw-r--r-- 1 boincer umatlas         0 Oct 14 10:27 boinc_lockfile
[2025-10-14 11:40:51] -rw-r--r-- 1 boincer umatlas      2546 Oct 14 10:27 pandaJob.out
[2025-10-14 11:40:51] -rw------- 1 boincer umatlas    973966 Oct 14 10:27 agis_schedconf.cvmfs.json
[2025-10-14 11:40:51] -rw------- 1 boincer umatlas   1560740 Oct 14 10:27 agis_ddmendpoints.agis.ALL.json
[2025-10-14 11:40:51] drwx------ 5 boincer umatlas      4096 Oct 14 10:27 pilot3
[2025-10-14 11:40:51] -rw-r--r-- 1 boincer umatlas      5953 Oct 14 11:36 init_data.xml
[2025-10-14 11:40:51] -rw------- 1 boincer umatlas 193869199 Oct 14 11:39 HITS.46676269._097213.pool.root.1
[2025-10-14 11:40:51] -rw-r--r-- 1 boincer umatlas       529 Oct 14 11:39 boinc_task_state.xml
[2025-10-14 11:40:51] -rw------- 1 boincer umatlas      1046 Oct 14 11:39 memory_monitor_summary.json
[2025-10-14 11:40:51] -rw------- 1 boincer umatlas    372386 Oct 14 11:39 log.46676269._097213.job.log.tgz.1
[2025-10-14 11:40:51] -rw------- 1 boincer umatlas      7845 Oct 14 11:40 heartbeat.json
[2025-10-14 11:40:51] -rw-r--r-- 1 boincer umatlas      8192 Oct 14 11:40 boinc_mmap_file
[2025-10-14 11:40:51] -rw-r--r-- 1 boincer umatlas        27 Oct 14 11:40 wrapper_checkpoint.txt
[2025-10-14 11:40:51] -rw------- 1 boincer umatlas        95 Oct 14 11:40 pilot_heartbeat.json
[2025-10-14 11:40:51] -rw------- 1 boincer umatlas      4746 Oct 14 11:40 pilotlog.txt
[2025-10-14 11:40:51] -rw------- 1 boincer umatlas    631565 Oct 14 11:40 log.46676269._097213.job.log.1
[2025-10-14 11:40:51] -rw------- 1 boincer umatlas       357 Oct 14 11:40 output.list
[2025-10-14 11:40:51] -rw-r--r-- 1 boincer umatlas       620 Oct 14 11:40 runtime_log
[2025-10-14 11:40:51] -rw------- 1 boincer umatlas   1024000 Oct 14 11:40 result.tar.gz
[2025-10-14 11:40:51] -rw-r--r-- 1 boincer umatlas      8705 Oct 14 11:40 runtime_log.err
[2025-10-14 11:40:51] -rw------- 1 boincer umatlas       659 Oct 14 11:40 mgCODmOAvS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmVmVMDmbCfHUo.diag
[2025-10-14 11:40:51] -rw-r--r-- 1 boincer umatlas     22107 Oct 14 11:40 stderr.txt
[2025-10-14 11:40:51] HITS file was successfully produced:
[2025-10-14 11:40:51] -rw------- 1 boincer umatlas 193869199 Oct 14 11:39 shared/HITS.pool.root.1
[2025-10-14 11:40:51]  *** Contents of shared directory: ***
[2025-10-14 11:40:51] total 406216
[2025-10-14 11:40:51] -rw-r--r-- 2 boincer umatlas 220468784 Oct 14 10:27 ATLAS.root_0
[2025-10-14 11:40:51] -rw-r--r-- 2 boincer umatlas     15120 Oct 14 10:27 start_atlas.sh
[2025-10-14 11:40:51] -rw-r--r-- 2 boincer umatlas    569679 Oct 14 10:27 input.tar.gz
[2025-10-14 11:40:51] -rw------- 1 boincer umatlas 193869199 Oct 14 11:39 HITS.pool.root.1
[2025-10-14 11:40:51] -rw------- 1 boincer umatlas   1024000 Oct 14 11:40 result.tar.gz
11:40:52 (27922): run_atlas exited; CPU time 46626.575877
11:40:52 (27922): called boinc_finish(0)

</stderr_txt>
]]>

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