Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-14 16:25:36 (85252): vboxwrapper version 26210
2025-10-14 16:25:36 (85252): BOINC client version: 8.0.2
2025-10-14 16:25:36 (85252): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-10-14 16:25:37 (85252): Successfully copied 'init_data.xml' to the shared directory.
2025-10-14 16:25:37 (85252): Create VM. (boinc_b6683fc59f251d6c, slot#14)
2025-10-14 16:25:37 (85252): Setting Memory Size for VM. (4400MB)
2025-10-14 16:25:38 (85252): Setting CPU Count for VM. (4)
2025-10-14 16:25:38 (85252): Setting Chipset Options for VM.
2025-10-14 16:25:38 (85252): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-14 16:25:39 (85252): Setting Boot Options for VM.
2025-10-14 16:25:39 (85252): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-14 16:25:39 (85252): Enabling VM Network Access.
2025-10-14 16:25:40 (85252): Disabling USB Support for VM.
2025-10-14 16:25:40 (85252): Disabling COM Port Support for VM.
2025-10-14 16:25:40 (85252): Disabling LPT Port Support for VM.
2025-10-14 16:25:40 (85252): Disabling Audio Support for VM.
2025-10-14 16:25:41 (85252): Disabling Clipboard Support for VM.
2025-10-14 16:25:41 (85252): Disabling Drag and Drop Support for VM.
2025-10-14 16:25:41 (85252): Adding storage controller(s) to VM.
2025-10-14 16:25:41 (85252): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-14 16:25:43 (85252): Adding VirtualBox Guest Additions to VM.
2025-10-14 16:25:44 (85252): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-14 16:25:44 (85252): forwarding host port 64163 to guest port 80
2025-10-14 16:25:44 (85252): Enabling remote desktop for VM.
2025-10-14 16:25:45 (85252): Enabling shared directory for VM.
2025-10-14 16:25:46 (85252): Starting VM using VBoxManage interface. (boinc_b6683fc59f251d6c, slot#14)
2025-10-14 16:25:50 (85252): Successfully started VM. (PID = '112096')
2025-10-14 16:25:50 (85252): Reporting VM Process ID to BOINC.
2025-10-14 16:25:50 (85252): Guest Log: BIOS: VirtualBox 7.1.6
2025-10-14 16:25:50 (85252): Guest Log: CPUID EDX: 0x178bfbff
2025-10-14 16:25:50 (85252): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-14 16:25:50 (85252): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-14 16:25:50 (85252): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-14 16:25:50 (85252): Detected: Web Application Enabled (http://localhost:64163)
2025-10-14 16:25:50 (85252): Detected: Remote Desktop Enabled (localhost:64164)
2025-10-14 16:25:50 (85252): Preference change detected
2025-10-14 16:25:50 (85252): Setting CPU throttle for VM. (100%)
2025-10-14 16:25:50 (85252): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-14 16:25:52 (85252): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-14 16:25:52 (85252): Guest Log: BIOS: Booting from Hard Disk...
2025-10-14 16:25:54 (85252): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-14 16:25:54 (85252): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-14 16:25:54 (85252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-14 16:26:00 (85252): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-14 16:26:00 (85252): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-14 16:26:02 (85252): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-14 16:26:02 (85252): Guest Log: 00:00:00.000089 main     Log opened 2025-10-14T16:26:01.383549000Z
2025-10-14 16:26:02 (85252): Guest Log: 00:00:00.000150 main     OS Product: Linux
2025-10-14 16:26:02 (85252): Guest Log: 00:00:00.000162 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-14 16:26:02 (85252): Guest Log: 00:00:00.000172 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-14 16:26:02 (85252): Guest Log: 00:00:00.000182 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-14 16:26:02 (85252): Guest Log: 00:00:00.000183 main     Process ID: 1323
2025-10-14 16:26:02 (85252): Guest Log: 00:00:00.000183 main     Package type: LINUX_64BITS_GENERIC
2025-10-14 16:26:02 (85252): Guest Log: 00:00:00.000498 main     5.2.32 r132073 started. Verbose level = 0
2025-10-14 16:26:02 (85252): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-14 16:26:02 (85252): Guest Log: [INFO] Mounting shared directory
2025-10-14 16:26:02 (85252): Guest Log: [INFO] Checking for init_data.xml
2025-10-14 16:26:05 (85252): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-14 16:26:05 (85252): Guest Log: [INFO] Detected branch: prod
2025-10-14 16:26:06 (85252): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-14 16:26:06 (85252): Guest Log: Copying input files
2025-10-14 16:26:06 (85252): Guest Log: Copied input files into RunAtlas.
2025-10-14 16:26:06 (85252): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-14 16:26:06 (85252): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-14 16:26:06 (85252): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-14 16:26:06 (85252): Guest Log: Further information can be found at the LHC@home message board.
2025-10-14 16:26:12 (85252): Guest Log: 00:00:10.077843 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 814 112 000ns (GuestNow=1 760 448 372 570 574 000 ns GuestLast=1 760 459 161 384 686 000 ns fSetTimeLastLoop=true )
2025-10-14 16:26:13 (85252): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-14 16:26:13 (85252): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-14 16:26:13 (85252): Guest Log: 2.6.3.0 1617 0 30164 151698 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-14 16:26:14 (85252): Guest Log: copied the webapp to /var/www
2025-10-14 16:26:14 (85252): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-14 16:26:14 (85252): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-14 16:26:14 (85252): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-14 16:26:14 (85252): Guest Log:  *** Starting ATLAS job. (PandaID=6832429069 taskID=46376905) ***
2025-10-14 17:30:02 (85252): VM state change detected. (old = 'running', new = 'paused')
2025-10-14 22:00:01 (85252): VM state change detected. (old = 'paused', new = 'running')
2025-10-14 22:00:03 (85252): Guest Log: 01:07:02.899210 timesync vgsvcTimeSyncWorker: Radical host time change: 16 203 194 000 000ns (HostNow=1 760 468 386 865 000 000 ns HostLast=1 760 452 183 671 000 000 ns)
2025-10-14 22:00:13 (85252): Guest Log: 01:07:12.900896 timesync vgsvcTimeSyncWorker: Radical guest time change: 16 011 474 820 000ns (GuestNow=1 760 468 396 866 738 000 ns GuestLast=1 760 452 385 391 918 000 ns fSetTimeLastLoop=true )
2025-10-14 22:23:42 (85252): Guest Log:  *** Job finished ***
2025-10-14 22:23:42 (85252): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-14 22:23:42 (85252): Guest Log: 2025-10-14 19:24:10,357 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-14 22:23:42 (85252): Guest Log: 2025-10-14 19:24:10,357 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-14 22:23:42 (85252): Guest Log: 2025-10-14 19:24:25,997 | INFO     | [monitor] cgroup control has ended
2025-10-14 22:23:42 (85252): Guest Log: 2025-10-14 19:24:26,067 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139960704440128)>', '<ExcThread(monitor, started 139959755335424)>']
2025-10-14 22:23:42 (85252): Guest Log: 2025-10-14 19:24:26,922 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-14 22:23:42 (85252): Guest Log: 2025-10-14 19:24:26,922 | INFO     | [monitor] control thread has ended
2025-10-14 22:23:42 (85252): Guest Log: 2025-10-14 19:24:31,073 | INFO     | all workflow threads have been joined
2025-10-14 22:23:42 (85252): Guest Log: 2025-10-14 19:24:31,074 | INFO     | end of generic workflow (traces error code: 0)
2025-10-14 22:23:42 (85252): Guest Log: 2025-10-14 19:24:31,074 | INFO     | traces error code: 0
2025-10-14 22:23:42 (85252): Guest Log: 2025-10-14 19:24:31,074 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-14 22:23:42 (85252): Guest Log: 2025-10-14 19:24:31,152 [wrapper] ==== pilot stdout END ====
2025-10-14 22:23:42 (85252): Guest Log: 2025-10-14 19:24:31,155 [wrapper] ==== wrapper stdout RESUME ====
2025-10-14 22:23:42 (85252): Guest Log: 2025-10-14 19:24:31,158 [wrapper] pilotpid: 5994
2025-10-14 22:23:42 (85252): Guest Log: 2025-10-14 19:24:31,160 [wrapper] Pilot exit status: 0
2025-10-14 22:23:42 (85252): Guest Log: 2025-10-14 19:24:31,205 [wrapper] pandaids: 6832429069
2025-10-14 22:23:42 (85252): Guest Log: 2025-10-14 19:24:31,221 [wrapper] cleanup supervisor_pilot  3181 5995
2025-10-14 22:23:42 (85252): Guest Log: 2025-10-14 19:24:31,223 [wrapper] Test setup, not cleaning
2025-10-14 22:23:42 (85252): Guest Log: 2025-10-14 19:24:31,225 [wrapper] apfmon messages muted
2025-10-14 22:23:42 (85252): Guest Log: 2025-10-14 19:24:31,228 [wrapper] ==== wrapper stdout END ====
2025-10-14 22:23:42 (85252): Guest Log: 2025-10-14 19:24:31,230 [wrapper] ==== wrapper stderr END ====
2025-10-14 22:23:42 (85252): Guest Log:  *** Error codes and diagnostics ***
2025-10-14 22:23:42 (85252): Guest Log:     "exeErrorCode": 0,
2025-10-14 22:23:42 (85252): Guest Log:     "exeErrorDiag": "",
2025-10-14 22:23:42 (85252): Guest Log:     "pilotErrorCode": 0,
2025-10-14 22:23:42 (85252): Guest Log:     "pilotErrorDiag": "",
2025-10-14 22:23:42 (85252): Guest Log:  *** Listing of results directory ***
2025-10-14 22:23:42 (85252): Guest Log: total 185880
2025-10-14 22:23:42 (85252): Guest Log: -rw-r--r--. 1 atlas atlas    552446 Oct  6 08:08 pilot3.tar.gz
2025-10-14 22:23:42 (85252): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  6 08:18 runpilot2-wrapper.sh
2025-10-14 22:23:42 (85252): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  6 08:18 queuedata.json
2025-10-14 22:23:42 (85252): Guest Log: -rwxr-xr-x. 1 atlas atlas     12310 Oct 14 13:26 init_data.xml
2025-10-14 22:23:42 (85252): Guest Log: -rwxr-xr-x. 1 atlas atlas    565596 Oct 14 13:26 input.tar.gz
2025-10-14 22:23:42 (85252): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 14 13:26 start_atlas.sh
2025-10-14 22:23:42 (85252): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 14 13:26 EVNT.46376901._004009.pool.root.1 -> /data/./ATLAS.root_0
2025-10-14 22:23:42 (85252): Guest Log: -rw-r--r--. 1 atlas atlas      2519 Oct 14 13:26 pandaJob.out
2025-10-14 22:23:42 (85252): Guest Log: -rw-------. 1 atlas atlas    973969 Oct 14 13:26 agis_schedconf.cvmfs.json
2025-10-14 22:23:42 (85252): Guest Log: drwx------. 4 atlas atlas      4096 Oct 14 13:26 pilot3
2025-10-14 22:23:42 (85252): Guest Log: -rw-------. 1 atlas atlas 184466989 Oct 14 19:23 HITS.46376905._108110.pool.root.1
2025-10-14 22:23:42 (85252): Guest Log: -rw-------. 1 atlas atlas      1025 Oct 14 19:23 memory_monitor_summary.json
2025-10-14 22:23:42 (85252): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 14 19:23 agis_ddmendpoints.agis.ALL.json
2025-10-14 22:23:42 (85252): Guest Log: -rw-------. 1 atlas atlas    270782 Oct 14 19:23 log.46376905._108110.job.log.tgz.1
2025-10-14 22:23:42 (85252): Guest Log: -rw-------. 1 atlas atlas      7753 Oct 14 19:23 heartbeat.json
2025-10-14 22:23:42 (85252): Guest Log: -rw-------. 1 atlas atlas        98 Oct 14 19:24 pilot_heartbeat.json
2025-10-14 22:23:42 (85252): Guest Log: -rw-------. 1 atlas atlas      4877 Oct 14 19:24 pilotlog.txt
2025-10-14 22:23:42 (85252): Guest Log: -rw-------. 1 atlas atlas    756392 Oct 14 19:24 log.46376905._108110.job.log.1
2025-10-14 22:23:42 (85252): Guest Log: -rw-------. 1 atlas atlas       357 Oct 14 19:24 output.list
2025-10-14 22:23:42 (85252): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 14 19:24 runtime_log
2025-10-14 22:23:42 (85252): Guest Log: -rw-------. 1 atlas atlas   1044480 Oct 14 19:24 result.tar.gz
2025-10-14 22:23:42 (85252): Guest Log: -rw-r--r--. 1 atlas atlas      8639 Oct 14 19:24 runtime_log.err
2025-10-14 22:23:42 (85252): Guest Log: -rw-------. 1 atlas atlas       657 Oct 14 19:24 cz5MDmVbvP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTzSNDmXi8N2n.diag
2025-10-14 22:23:42 (85252): Guest Log: Looking for outputfile HITS.46376905._108110.pool.root.1
2025-10-14 22:23:42 (85252): Guest Log: HITS file was successfully produced
2025-10-14 22:23:42 (85252): Guest Log: -rw-------. 1 atlas atlas 184466989 Oct 14 19:23 /home/atlas/RunAtlas/HITS.46376905._108110.pool.root.1
2025-10-14 22:23:42 (85252): Guest Log: Successfully finished the ATLAS job!
2025-10-14 22:23:42 (85252): Guest Log: Copying the results back to the shared directory!
2025-10-14 22:23:42 (85252): Guest Log:  *** Contents of shared directory: ***
2025-10-14 22:23:42 (85252): Guest Log: total 393244
2025-10-14 22:23:42 (85252): Guest Log: -rwxrwxrwx. 1 root root 216567060 Oct 14 13:25 ATLAS.root_0
2025-10-14 22:23:42 (85252): Guest Log: -rwxrwxrwx. 1 root root 184466989 Oct 14 19:23 HITS.pool.root.1
2025-10-14 22:23:42 (85252): Guest Log: -rwxrwxrwx. 1 root root     12310 Oct 14 13:25 init_data.xml
2025-10-14 22:23:42 (85252): Guest Log: -rwxrwxrwx. 1 root root    565596 Oct 14 13:25 input.tar.gz
2025-10-14 22:23:42 (85252): Guest Log: -rwxrwxrwx. 1 root root   1044480 Oct 14 19:23 result.tar.gz
2025-10-14 22:23:42 (85252): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 14 13:25 start_atlas.sh
2025-10-14 22:23:42 (85252): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-14 22:23:42 (85252): VM Completion File Detected.
2025-10-14 22:23:42 (85252): Powering off VM.
2025-10-14 22:23:43 (85252): Successfully stopped VM.
2025-10-14 22:23:43 (85252): Deregistering VM. (boinc_b6683fc59f251d6c, slot#14)
2025-10-14 22:23:43 (85252): Removing network bandwidth throttle group from VM.
2025-10-14 22:23:43 (85252): Removing VM from VirtualBox.
2025-10-14 22:23:48 (85252): called boinc_finish(0)

</stderr_txt>
]]>

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