Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:25:40 (761231): wrapper (7.7.26015): starting
09:25:40 (761231): wrapper: running run_atlas (--nthreads 8)
[2025-10-14 09:25:40] Arguments: --nthreads 8
[2025-10-14 09:25:40] Threads: 8
[2025-10-14 09:25:40] Checking for CVMFS
[2025-10-14 09:25:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 09:25:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 09:25:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 09:25:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 09:25:42] 2.13.2.0 5281 8615 115676 151698 2 15 39500937 40960000 11335 16776704 0 12280478 99.919 2449458 34262 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-14 09:25:42] CVMFS is ok
[2025-10-14 09:25:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 09:25:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 09:25:42] Further information can be found at the LHC@home message board.
[2025-10-14 09:25:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 09:25:42] Checking for apptainer binary...
[2025-10-14 09:25:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 09:25:42] Running /usr/bin/apptainer --version
[2025-10-14 09:25:43] apptainer version 1.4.3-1.el9
[2025-10-14 09:25:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 09:25:43] c-210-33-4.aglt2.org
[2025-10-14 09:25:43] apptainer works
[2025-10-14 09:25:43] Set ATHENA_PROC_NUMBER=8
[2025-10-14 09:25:43] Set ATHENA_CORE_NUMBER=8
[2025-10-14 09:25:44] Starting ATLAS job with PandaID=6832635253
[2025-10-14 09:25:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 11:38:14]  *** The last 200 lines of the pilot log: ***
[2025-10-14 11:38:14] 2025-10-14 15:37:39,201 | INFO     | PID=768196 has CPU usage=11.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 11:38:14] 2025-10-14 15:37:39,201 | INFO     | .. there are 9 such processes running
[2025-10-14 11:38:14] 2025-10-14 15:37:40,202 | INFO     | time since job start (7855s) is within the limit (172800.0s)
[2025-10-14 11:38:14] 2025-10-14 15:37:41,145 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-14 11:38:14] 2025-10-14 15:37:41,148 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2652.370517857142
[2025-10-14 11:38:14] 2025-10-14 15:37:41,170 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6832635253/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 11:38:14] 2025-10-14 15:37:41,171 | INFO     | extracted standard info from prmon json
[2025-10-14 11:38:14] 2025-10-14 15:37:41,171 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 11:38:14] 2025-10-14 15:37:41,171 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 11:38:14] 2025-10-14 15:37:41,172 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 11:38:14] 2025-10-14 15:37:41,172 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 11:38:14] 2025-10-14 15:37:41,175 | INFO     | fitting pss+swap vs Time
[2025-10-14 11:38:14] 2025-10-14 15:37:41,176 | INFO     | sum of square deviations: 635061986.7244067
[2025-10-14 11:38:14] 2025-10-14 15:37:41,177 | INFO     | sum of deviations: 8072792870.77953
[2025-10-14 11:38:14] 2025-10-14 15:37:41,177 | INFO     | mean x: 1760452385.1338582
[2025-10-14 11:38:14] 2025-10-14 15:37:41,177 | INFO     | mean y: 2495666.307086614
[2025-10-14 11:38:14] 2025-10-14 15:37:41,177 | INFO     | -- intersect: -22376055972.972195
[2025-10-14 11:38:14] 2025-10-14 15:37:41,177 | INFO     | intersect: -22376055972.972195
[2025-10-14 11:38:14] 2025-10-14 15:37:41,177 | INFO     | chi2: 3.012192892758277
[2025-10-14 11:38:14] 2025-10-14 15:37:41,178 | INFO     | sum of square deviations: 562963494.1311475
[2025-10-14 11:38:14] 2025-10-14 15:37:41,179 | INFO     | sum of deviations: 15826446325.606565
[2025-10-14 11:38:14] 2025-10-14 15:37:41,179 | INFO     | mean x: 1760452232.6393442
[2025-10-14 11:38:14] 2025-10-14 15:37:41,179 | INFO     | mean y: 2511531.581967213
[2025-10-14 11:38:14] 2025-10-14 15:37:41,179 | INFO     | -- intersect: -49488624322.016
[2025-10-14 11:38:14] 2025-10-14 15:37:41,179 | INFO     | intersect: -49488624322.016
[2025-10-14 11:38:14] 2025-10-14 15:37:41,179 | INFO     | chi2: 2.352458744241134
[2025-10-14 11:38:14] 2025-10-14 15:37:41,179 | INFO     | current chi2=2.352458744241134 (change=21.90212154418244 %)
[2025-10-14 11:38:14] 2025-10-14 15:37:41,180 | INFO     | right removable region: 121
[2025-10-14 11:38:14] 2025-10-14 15:37:41,180 | INFO     | sum of square deviations: 562953124.1311475
[2025-10-14 11:38:14] 2025-10-14 15:37:41,181 | INFO     | sum of deviations: -18844645412.081966
[2025-10-14 11:38:14] 2025-10-14 15:37:41,181 | INFO     | mean x: 1760452537.6393442
[2025-10-14 11:38:14] 2025-10-14 15:37:41,181 | INFO     | mean y: 2551908.475409836
[2025-10-14 11:38:14] 2025-10-14 15:37:41,181 | INFO     | -- intersect: 58933042591.541115
[2025-10-14 11:38:14] 2025-10-14 15:37:41,181 | INFO     | intersect: 58933042591.541115
[2025-10-14 11:38:14] 2025-10-14 15:37:41,181 | INFO     | chi2: 0.8126821852378947
[2025-10-14 11:38:14] 2025-10-14 15:37:41,181 | INFO     | current chi2=0.8126821852378947 (change=73.02024756808589 %)
[2025-10-14 11:38:14] 2025-10-14 15:37:41,182 | INFO     | sum of square deviations: 496525983.811965
[2025-10-14 11:38:14] 2025-10-14 15:37:41,182 | INFO     | sum of deviations: -21037059323.042736
[2025-10-14 11:38:14] 2025-10-14 15:37:41,182 | INFO     | mean x: 1760452690.1367521
[2025-10-14 11:38:14] 2025-10-14 15:37:41,183 | INFO     | mean y: 2556776.94017094
[2025-10-14 11:38:14] 2025-10-14 15:37:41,183 | INFO     | -- intersect: 74590290118.69038
[2025-10-14 11:38:14] 2025-10-14 15:37:41,183 | INFO     | intersect: 74590290118.69038
[2025-10-14 11:38:14] 2025-10-14 15:37:41,183 | INFO     | chi2: 0.7559317061956938
[2025-10-14 11:38:14] 2025-10-14 15:37:41,183 | INFO     | current chi2=0.7559317061956938 (change=6.9831085352988795 %)
[2025-10-14 11:38:14] 2025-10-14 15:37:41,183 | INFO     | left removable region: 20
[2025-10-14 11:38:14] 2025-10-14 15:37:41,183 | INFO     | sum of square deviations: 319406623.80198026
[2025-10-14 11:38:14] 2025-10-14 15:37:41,184 | INFO     | sum of deviations: -9026441002.990097
[2025-10-14 11:38:14] 2025-10-14 15:37:41,184 | INFO     | mean x: 1760452812.1089108
[2025-10-14 11:38:14] 2025-10-14 15:37:41,184 | INFO     | mean y: 2566663.5445544557
[2025-10-14 11:38:14] 2025-10-14 15:37:41,184 | INFO     | -- intersect: 49753017226.83865
[2025-10-14 11:38:14] 2025-10-14 15:37:41,184 | INFO     | intersect: 49753017226.83865
[2025-10-14 11:38:14] 2025-10-14 15:37:41,185 | INFO     | chi2: 0.04921239171568871
[2025-10-14 11:38:14] 2025-10-14 15:37:41,185 | INFO     | -- intersect: 49753017226.83865
[2025-10-14 11:38:14] 2025-10-14 15:37:41,185 | INFO     | current memory leak: -28.26 B/s (using 101 data points, chi2=0.05)
[2025-10-14 11:38:14] 2025-10-14 15:37:41,185 | INFO     | could have reported an average CPU frequency of 2633 MHz (8 samples)
[2025-10-14 11:38:14] 2025-10-14 15:37:41,186 | INFO     | ..............................
[2025-10-14 11:38:14] 2025-10-14 15:37:41,186 | INFO     | . Timing measurements:
[2025-10-14 11:38:14] 2025-10-14 15:37:41,186 | INFO     | . get job = 0 s
[2025-10-14 11:38:14] 2025-10-14 15:37:41,186 | INFO     | . initial setup = 4 s
[2025-10-14 11:38:14] 2025-10-14 15:37:41,186 | INFO     | . payload setup = 45 s
[2025-10-14 11:38:14] 2025-10-14 15:37:41,186 | INFO     | . stage-in = 0 s
[2025-10-14 11:38:14] 2025-10-14 15:37:41,186 | INFO     | . payload execution = 7731 s
[2025-10-14 11:38:14] 2025-10-14 15:37:41,186 | INFO     | . stage-out = 1 s
[2025-10-14 11:38:14] 2025-10-14 15:37:41,186 | INFO     | . log creation = 0 s
[2025-10-14 11:38:14] 2025-10-14 15:37:41,186 | INFO     | ..............................
[2025-10-14 11:38:14] 2025-10-14 15:37:41,286 | INFO     | 
[2025-10-14 11:38:14] 2025-10-14 15:37:41,287 | INFO     | job summary report
[2025-10-14 11:38:14] 2025-10-14 15:37:41,287 | INFO     | --------------------------------------------------
[2025-10-14 11:38:14] 2025-10-14 15:37:41,287 | INFO     | PanDA job id: 6832635253
[2025-10-14 11:38:14] 2025-10-14 15:37:41,287 | INFO     | task id: 46376905
[2025-10-14 11:38:14] 2025-10-14 15:37:41,287 | INFO     | errors: (none)
[2025-10-14 11:38:14] 2025-10-14 15:37:41,287 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 11:38:14] 2025-10-14 15:37:41,288 | INFO     | pilot state: finished 
[2025-10-14 11:38:14] 2025-10-14 15:37:41,288 | INFO     | transexitcode: 0
[2025-10-14 11:38:14] 2025-10-14 15:37:41,288 | INFO     | exeerrorcode: 0
[2025-10-14 11:38:14] 2025-10-14 15:37:41,288 | INFO     | exeerrordiag: 
[2025-10-14 11:38:14] 2025-10-14 15:37:41,288 | INFO     | exitcode: 0
[2025-10-14 11:38:14] 2025-10-14 15:37:41,288 | INFO     | exitmsg: OK
[2025-10-14 11:38:14] 2025-10-14 15:37:41,288 | INFO     | cpuconsumptiontime: 39517 s
[2025-10-14 11:38:14] 2025-10-14 15:37:41,288 | INFO     | nevents: 400
[2025-10-14 11:38:14] 2025-10-14 15:37:41,288 | INFO     | neventsw: 0
[2025-10-14 11:38:14] 2025-10-14 15:37:41,288 | INFO     | pid: 788432
[2025-10-14 11:38:14] 2025-10-14 15:37:41,288 | INFO     | pgrp: 788432
[2025-10-14 11:38:14] 2025-10-14 15:37:41,288 | INFO     | corecount: 8
[2025-10-14 11:38:14] 2025-10-14 15:37:41,288 | INFO     | event service: False
[2025-10-14 11:38:14] 2025-10-14 15:37:41,288 | INFO     | sizes: {0: 2348648, 1: 2348847, 12: 2348847, 23: 2348875, 24: 2349165, 34: 2349193, 7780: 2376976, 7781: 2376975, 7782: 2386029, 7785: 2386085, 7794: 2386279}
[2025-10-14 11:38:14] 2025-10-14 15:37:41,288 | INFO     | --------------------------------------------------
[2025-10-14 11:38:14] 2025-10-14 15:37:41,288 | INFO     | 
[2025-10-14 11:38:14] 2025-10-14 15:37:41,289 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-14 11:38:14] 2025-10-14 15:37:41,310 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 11:38:14] 2025-10-14 15:37:41,310 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 11:38:14] 2025-10-14 15:37:41,311 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 11:38:14] 2025-10-14 15:37:41,311 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 11:38:14] 2025-10-14 15:37:41,311 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 11:38:14] 2025-10-14 15:37:41,311 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 11:38:14] 2025-10-14 15:37:41,311 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 11:38:14] 2025-10-14 15:37:41,311 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 11:38:14] 2025-10-14 15:37:41,311 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 11:38:14] 2025-10-14 15:37:41,311 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 11:38:14] 2025-10-14 15:37:41,311 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 11:38:14] 2025-10-14 15:37:41,311 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 11:38:14] 2025-10-14 15:37:41,311 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 11:38:14] 2025-10-14 15:37:41,311 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 11:38:14] 2025-10-14 15:37:41,312 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 11:38:14] 2025-10-14 15:37:41,312 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 11:38:14] 2025-10-14 15:37:41,312 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 11:38:14] 2025-10-14 15:37:41,312 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 11:38:14] 2025-10-14 15:37:41,312 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 11:38:14] 2025-10-14 15:37:41,312 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 11:38:14] 2025-10-14 15:37:41,312 | INFO     | job 6832635253 has completed (purged errors)
[2025-10-14 11:38:14] 2025-10-14 15:37:41,312 | INFO     | overall cleanup function is called
[2025-10-14 11:38:14] 2025-10-14 15:37:42,322 | INFO     | --- collectZombieJob: --- 10, [788432]
[2025-10-14 11:38:14] 2025-10-14 15:37:42,323 | INFO     | zombie collector waiting for pid 788432
[2025-10-14 11:38:14] 2025-10-14 15:37:42,323 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 11:38:14] 2025-10-14 15:37:42,323 | INFO     | collected zombie processes
[2025-10-14 11:38:14] 2025-10-14 15:37:42,323 | INFO     | will attempt to kill all subprocesses of pid=788432
[2025-10-14 11:38:14] 2025-10-14 15:37:42,576 | INFO     | process IDs to be killed: [788432] (in reverse order)
[2025-10-14 11:38:14] 2025-10-14 15:37:42,694 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 11:38:14] 2025-10-14 15:37:42,695 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 11:38:14] 2025-10-14 15:37:42,712 | INFO     | did not find any defunct processes belonging to 788432
[2025-10-14 11:38:14] 2025-10-14 15:37:42,721 | INFO     | did not find any defunct processes belonging to 788432
[2025-10-14 11:38:14] 2025-10-14 15:37:42,721 | INFO     | ready for new job
[2025-10-14 11:38:14] 2025-10-14 15:37:42,721 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 11:38:14] 2025-10-14 15:37:42,723 | INFO     | ***************************************
[2025-10-14 11:38:14] 2025-10-14 15:37:42,723 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-14 11:38:14] 2025-10-14 15:37:42,723 | INFO     | ***************************************
[2025-10-14 11:38:14] 2025-10-14 15:37:42,723 | INFO     | 
[2025-10-14 11:38:14] 2025-10-14 15:37:42,726 | INFO     | architecture information:
[2025-10-14 11:38:14] 2025-10-14 15:37:42,727 | INFO     | executing command: cat /etc/os-release
[2025-10-14 11:38:14] 2025-10-14 15:37:42,773 | INFO     | cat /etc/os-release:
[2025-10-14 11:38:14] NAME="CentOS Linux"
[2025-10-14 11:38:14] VERSION="7 (Core)"
[2025-10-14 11:38:14] ID="centos"
[2025-10-14 11:38:14] ID_LIKE="rhel fedora"
[2025-10-14 11:38:14] VERSION_ID="7"
[2025-10-14 11:38:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 11:38:14] ANSI_COLOR="0;31"
[2025-10-14 11:38:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 11:38:14] HOME_URL="https://www.centos.org/"
[2025-10-14 11:38:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 11:38:14] 
[2025-10-14 11:38:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 11:38:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 11:38:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 11:38:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 11:38:14] 
[2025-10-14 11:38:14] 2025-10-14 15:37:42,773 | INFO     | ***************************************
[2025-10-14 11:38:14] 2025-10-14 15:37:43,277 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-14 11:38:14] 2025-10-14 15:37:43,302 | INFO     | sufficient remaining disk space (75006738432 B)
[2025-10-14 11:38:14] 2025-10-14 15:37:43,303 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 11:38:14] 2025-10-14 15:37:43,303 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 11:38:14] 2025-10-14 15:37:43,303 | INFO     | update_server=False
[2025-10-14 11:38:14] 2025-10-14 15:37:43,303 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 11:38:14] 2025-10-14 15:37:43,303 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 11:38:14] 2025-10-14 15:37:43,304 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 11:38:14] 2025-10-14 15:37:43,304 | INFO     | aborting loop
[2025-10-14 11:38:14] 2025-10-14 15:37:43,887 | INFO     | all data control threads have been joined
[2025-10-14 11:38:14] 2025-10-14 15:37:44,011 | INFO     | all job control threads have been joined
[2025-10-14 11:38:14] 2025-10-14 15:37:44,309 | INFO     | [job] retrieve thread has finished
[2025-10-14 11:38:14] 2025-10-14 15:37:44,310 | INFO     | [job] job monitor thread has finished
[2025-10-14 11:38:14] 2025-10-14 15:37:44,504 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 11:38:14] 2025-10-14 15:37:44,616 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 11:38:14] 2025-10-14 15:37:44,710 | INFO     | all payload control threads have been joined
[2025-10-14 11:38:14] 2025-10-14 15:37:44,752 | INFO     | [payload] validate_post thread has finished
[2025-10-14 11:38:14] 2025-10-14 15:37:44,893 | INFO     | [data] control thread has finished
[2025-10-14 11:38:14] 2025-10-14 15:37:45,016 | INFO     | [job] control thread has finished
[2025-10-14 11:38:14] 2025-10-14 15:37:45,122 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 11:38:14] 2025-10-14 15:37:45,241 | INFO     | [payload] failed_post thread has finished
[2025-10-14 11:38:14] 2025-10-14 15:37:45,249 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 11:38:14] 2025-10-14 15:37:45,410 | INFO     | [data] copytool_in thread has finished
[2025-10-14 11:38:14] 2025-10-14 15:37:45,529 | INFO     | [job] validate thread has finished
[2025-10-14 11:38:14] 2025-10-14 15:37:45,736 | INFO     | [payload] control thread has finished
[2025-10-14 11:38:14] 2025-10-14 15:37:45,786 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 11:38:14] 2025-10-14 15:37:46,307 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 11:38:14] 2025-10-14 15:37:46,510 | INFO     | [data] copytool_out thread has finished
[2025-10-14 11:38:14] 2025-10-14 15:37:47,312 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 11:38:14] 2025-10-14 15:37:47,313 | INFO     | [job] queue monitor thread has finished
[2025-10-14 11:38:14] 2025-10-14 15:37:58,536 | INFO     | [monitor] cgroup control has ended
[2025-10-14 11:38:14] 2025-10-14 15:37:58,675 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139801138964288)>', '<ExcThread(monitor, started 139800514393856)>']
[2025-10-14 11:38:14] 2025-10-14 15:38:03,701 | INFO     | all workflow threads have been joined
[2025-10-14 11:38:14] 2025-10-14 15:38:03,701 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 11:38:14] 2025-10-14 15:38:03,704 | INFO     | traces error code: 0
[2025-10-14 11:38:14] 2025-10-14 15:38:03,704 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 11:38:14] 2025-10-14 15:38:13,903 | INFO     | PID=768196 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-14 11:38:14] 2025-10-14 15:38:13,903 | INFO     | .. there are 9 such processes running
[2025-10-14 11:38:14] 2025-10-14 15:38:13,904 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 11:38:14] 2025-10-14 15:38:13,904 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 11:38:14] 2025-10-14 15:38:13,904 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 11:38:14] 2025-10-14 15:38:13,904 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 11:38:14] 2025-10-14 15:38:13,904 | INFO     | [monitor] control thread has ended
[2025-10-14 11:38:14] 2025-10-14 15:38:14,068 [wrapper] ==== pilot stdout END ====
[2025-10-14 11:38:14] 2025-10-14 15:38:14,072 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 11:38:14] 2025-10-14 15:38:14,074 [wrapper] pilotpid: 768196
[2025-10-14 11:38:14] 2025-10-14 15:38:14,077 [wrapper] Pilot exit status: 0
[2025-10-14 11:38:14] 2025-10-14 15:38:14,130 [wrapper] pandaids: 6832635253
[2025-10-14 11:38:14] 2025-10-14 15:38:14,335 [wrapper] cleanup supervisor_pilot  935812 768197
[2025-10-14 11:38:14] 2025-10-14 15:38:14,340 [wrapper] Test setup, not cleaning
[2025-10-14 11:38:14] 2025-10-14 15:38:14,343 [wrapper] apfmon messages muted
[2025-10-14 11:38:14] 2025-10-14 15:38:14,346 [wrapper] ==== wrapper stdout END ====
[2025-10-14 11:38:14] 2025-10-14 15:38:14,349 [wrapper] ==== wrapper stderr END ====
[2025-10-14 11:38:14]  *** Error codes and diagnostics ***
[2025-10-14 11:38:14]     "exeErrorCode": 0,
[2025-10-14 11:38:14]     "exeErrorDiag": "",
[2025-10-14 11:38:14]     "pilotErrorCode": 0,
[2025-10-14 11:38:14]     "pilotErrorDiag": "",
[2025-10-14 11:38:14]  *** Listing of results directory ***
[2025-10-14 11:38:14] total 391228
[2025-10-14 11:38:14] -rw-r--r--. 1 boincer umatlas    552446 Oct  6 06:49 pilot3.tar.gz
[2025-10-14 11:38:14] -rw-r--r--. 1 boincer umatlas      5112 Oct  6 07:22 queuedata.json
[2025-10-14 11:38:14] -rwx------. 1 boincer umatlas     36292 Oct  6 07:22 runpilot2-wrapper.sh
[2025-10-14 11:38:14] -rw-r--r--. 1 boincer umatlas       100 Oct 14 09:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 11:38:14] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 14 09:25 run_atlas
[2025-10-14 11:38:14] -rw-r--r--. 1 boincer umatlas       105 Oct 14 09:25 job.xml
[2025-10-14 11:38:14] -rw-r--r--. 2 boincer umatlas 215807236 Oct 14 09:25 EVNT.46376901._004092.pool.root.1
[2025-10-14 11:38:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 09:25 start_atlas.sh
[2025-10-14 11:38:14] drwxrwx--x. 2 boincer umatlas      4096 Oct 14 09:25 shared
[2025-10-14 11:38:14] -rw-r--r--. 2 boincer umatlas    565604 Oct 14 09:25 input.tar.gz
[2025-10-14 11:38:14] -rw-r--r--. 1 boincer umatlas         0 Oct 14 09:25 boinc_lockfile
[2025-10-14 11:38:14] -rw-r--r--. 1 boincer umatlas      2520 Oct 14 09:25 pandaJob.out
[2025-10-14 11:38:14] -rw-------. 1 boincer umatlas    973969 Oct 14 09:26 agis_schedconf.cvmfs.json
[2025-10-14 11:38:14] -rw-------. 1 boincer umatlas   1560580 Oct 14 09:26 agis_ddmendpoints.agis.ALL.json
[2025-10-14 11:38:14] drwx------. 4 boincer umatlas      4096 Oct 14 09:26 pilot3
[2025-10-14 11:38:14] -rw-r--r--. 1 boincer umatlas      6841 Oct 14 11:30 init_data.xml
[2025-10-14 11:38:14] -rw-------. 1 boincer umatlas 177999466 Oct 14 11:36 HITS.46376905._110378.pool.root.1
[2025-10-14 11:38:14] -rw-r--r--. 1 boincer umatlas       529 Oct 14 11:36 boinc_task_state.xml
[2025-10-14 11:38:14] -rw-------. 1 boincer umatlas      1041 Oct 14 11:37 memory_monitor_summary.json
[2025-10-14 11:38:14] -rw-------. 1 boincer umatlas    388223 Oct 14 11:37 log.46376905._110378.job.log.tgz.1
[2025-10-14 11:38:14] -rw-------. 1 boincer umatlas      7834 Oct 14 11:37 heartbeat.json
[2025-10-14 11:38:14] -rw-r--r--. 1 boincer umatlas      8192 Oct 14 11:38 boinc_mmap_file
[2025-10-14 11:38:14] -rw-------. 1 boincer umatlas        95 Oct 14 11:38 pilot_heartbeat.json
[2025-10-14 11:38:14] -rw-------. 1 boincer umatlas       821 Oct 14 11:38 pilotlog.txt
[2025-10-14 11:38:14] -rw-r--r--. 1 boincer umatlas        27 Oct 14 11:38 wrapper_checkpoint.txt
[2025-10-14 11:38:14] -rw-------. 1 boincer umatlas   1075983 Oct 14 11:38 log.46376905._110378.job.log.1
[2025-10-14 11:38:14] -rw-------. 1 boincer umatlas       357 Oct 14 11:38 output.list
[2025-10-14 11:38:14] -rw-r--r--. 1 boincer umatlas       620 Oct 14 11:38 runtime_log
[2025-10-14 11:38:14] -rw-------. 1 boincer umatlas   1484800 Oct 14 11:38 result.tar.gz
[2025-10-14 11:38:14] -rw-r--r--. 1 boincer umatlas      8713 Oct 14 11:38 runtime_log.err
[2025-10-14 11:38:14] -rw-------. 1 boincer umatlas       654 Oct 14 11:38 rOgKDm0TyP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmELTNDmypOgSn.diag
[2025-10-14 11:38:14] -rw-r--r--. 1 boincer umatlas     21282 Oct 14 11:38 stderr.txt
[2025-10-14 11:38:14] HITS file was successfully produced:
[2025-10-14 11:38:14] -rw-------. 1 boincer umatlas 177999466 Oct 14 11:36 shared/HITS.pool.root.1
[2025-10-14 11:38:14]  *** Contents of shared directory: ***
[2025-10-14 11:38:14] total 386608
[2025-10-14 11:38:14] -rw-r--r--. 2 boincer umatlas 215807236 Oct 14 09:25 ATLAS.root_0
[2025-10-14 11:38:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 09:25 start_atlas.sh
[2025-10-14 11:38:14] -rw-r--r--. 2 boincer umatlas    565604 Oct 14 09:25 input.tar.gz
[2025-10-14 11:38:14] -rw-------. 1 boincer umatlas 177999466 Oct 14 11:36 HITS.pool.root.1
[2025-10-14 11:38:14] -rw-------. 1 boincer umatlas   1484800 Oct 14 11:38 result.tar.gz
11:38:16 (761231): run_atlas exited; CPU time 39684.599239
11:38:16 (761231): called boinc_finish(0)

</stderr_txt>
]]>

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