Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:29:59 (1116338): wrapper (7.7.26015): starting
07:29:59 (1116338): wrapper: running run_atlas (--nthreads 8)
[2025-10-14 07:29:59] Arguments: --nthreads 8
[2025-10-14 07:29:59] Threads: 8
[2025-10-14 07:29:59] Checking for CVMFS
[2025-10-14 07:29:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 07:30:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 07:30:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 07:30:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 07:30:00] 2.13.2.0 704839 127824 160380 151696 3 83 20653147 40960000 19677 16776704 1 306708094 99.698 241427336 35549 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-14 07:30:00] CVMFS is ok
[2025-10-14 07:30:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 07:30:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 07:30:00] Further information can be found at the LHC@home message board.
[2025-10-14 07:30:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 07:30:00] Checking for apptainer binary...
[2025-10-14 07:30:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 07:30:00] Running /usr/bin/apptainer --version
[2025-10-14 07:30:00] apptainer version 1.4.3-1.el9
[2025-10-14 07:30:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 07:30:00] c-212-4.aglt2.org
[2025-10-14 07:30:00] apptainer works
[2025-10-14 07:30:00] Set ATHENA_PROC_NUMBER=8
[2025-10-14 07:30:00] Set ATHENA_CORE_NUMBER=8
[2025-10-14 07:30:00] Starting ATLAS job with PandaID=6840854769
[2025-10-14 07:30:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 08:55:31]  *** The last 200 lines of the pilot log: ***
[2025-10-14 08:55:31]  protocol_id=None
[2025-10-14 08:55:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-14 08:55:31]  replicas=None
[2025-10-14 08:55:31]  scope=mc23_13p6TeV
[2025-10-14 08:55:31]  status=None
[2025-10-14 08:55:31]  status_code=0
[2025-10-14 08:55:31]  storage_token=
[2025-10-14 08:55:31]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840854769/log.46676269._091712.job.log.tgz.1
[2025-10-14 08:55:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b1/b1/log.46676269._091712.job.log.tgz.1
[2025-10-14 08:55:31]  workdir=None
[2025-10-14 08:55:31] ]
[2025-10-14 08:55:31] 2025-10-14 12:54:27,060 | INFO     | transferring file log.46676269._091712.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840854769/log.46676269._091712.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-14 08:55:31] 2025-10-14 12:54:27,061 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840854769/log.46676269._091712.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._091712.job
[2025-10-14 08:55:31] 2025-10-14 12:54:27,085 | INFO     | adding to output.list: log.46676269._091712.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b1/b1/log.46676269._091712.job.log.tg
[2025-10-14 08:55:31] 2025-10-14 12:54:27,086 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-14 08:55:31] 2025-10-14 12:54:27,086 | INFO     | summary of transferred files:
[2025-10-14 08:55:31] 2025-10-14 12:54:27,086 | INFO     |  -- lfn=log.46676269._091712.job.log.tgz.1, status_code=0, status=transferred
[2025-10-14 08:55:31] 2025-10-14 12:54:27,086 | INFO     | stage-out finished correctly
[2025-10-14 08:55:31] 2025-10-14 12:54:27,210 | INFO     | time since job start (5051s) is within the limit (172800.0s)
[2025-10-14 08:55:31] 2025-10-14 12:54:27,439 | INFO     | monitor loop #364: job 0:6840854769 is in state 'finished'
[2025-10-14 08:55:31] 2025-10-14 12:54:27,439 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 08:55:31] 2025-10-14 12:54:27,454 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-14 08:55:31] 2025-10-14 12:54:27,538 | INFO     | job 6840854769 has state=finished
[2025-10-14 08:55:31] 2025-10-14 12:54:27,538 | INFO     | preparing for final server update for job 6840854769 in state='finished'
[2025-10-14 08:55:31] 2025-10-14 12:54:27,539 | INFO     | this job has now completed (state=finished)
[2025-10-14 08:55:31] 2025-10-14 12:54:27,539 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-14 08:55:31] 2025-10-14 12:54:27,539 | INFO     | log transfer has been attempted: DONE
[2025-10-14 08:55:31] 2025-10-14 12:54:27,539 | INFO     | job 6840854769 has finished - writing final server update
[2025-10-14 08:55:31] 2025-10-14 12:54:27,539 | INFO     | total number of processed events: 400 (read)
[2025-10-14 08:55:31] 2025-10-14 12:54:27,540 | INFO     | executing command: lscpu
[2025-10-14 08:55:31] 2025-10-14 12:54:27,607 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-14 08:55:31] 2025-10-14 12:54:29,216 | INFO     | time since job start (5053s) is within the limit (172800.0s)
[2025-10-14 08:55:31] 2025-10-14 12:54:29,942 | INFO     | monitor loop #365: job 0:6840854769 is in state 'finished'
[2025-10-14 08:55:31] 2025-10-14 12:54:29,942 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 08:55:31] 2025-10-14 12:54:31,222 | INFO     | time since job start (5055s) is within the limit (172800.0s)
[2025-10-14 08:55:31] 2025-10-14 12:54:32,001 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 08:55:31] 2025-10-14 12:54:32,007 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2939.6388750000006
[2025-10-14 08:55:31] 2025-10-14 12:54:32,021 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840854769/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 08:55:31] 2025-10-14 12:54:32,022 | INFO     | extracted standard info from prmon json
[2025-10-14 08:55:31] 2025-10-14 12:54:32,022 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 08:55:31] 2025-10-14 12:54:32,022 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 08:55:31] 2025-10-14 12:54:32,023 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 08:55:31] 2025-10-14 12:54:32,023 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 08:55:31] 2025-10-14 12:54:32,025 | INFO     | fitting pss+swap vs Time
[2025-10-14 08:55:31] 2025-10-14 12:54:32,025 | INFO     | sum of square deviations: 136094112.94736847
[2025-10-14 08:55:31] 2025-10-14 12:54:32,025 | INFO     | sum of deviations: -15200418763.526314
[2025-10-14 08:55:31] 2025-10-14 12:54:32,025 | INFO     | mean x: 1760444040.5263157
[2025-10-14 08:55:31] 2025-10-14 12:54:32,025 | INFO     | mean y: 2766930.763157895
[2025-10-14 08:55:31] 2025-10-14 12:54:32,025 | INFO     | -- intersect: 196627632226.02362
[2025-10-14 08:55:31] 2025-10-14 12:54:32,025 | INFO     | intersect: 196627632226.02362
[2025-10-14 08:55:31] 2025-10-14 12:54:32,026 | INFO     | chi2: 0.1701532058517913
[2025-10-14 08:55:31] 2025-10-14 12:54:32,026 | INFO     | -- intersect: 196627632226.02362
[2025-10-14 08:55:31] 2025-10-14 12:54:32,026 | INFO     | current memory leak: -111.69 B/s (using 76 data points, chi2=0.17)
[2025-10-14 08:55:31] 2025-10-14 12:54:32,026 | INFO     | could have reported an average CPU frequency of 2970 MHz (6 samples)
[2025-10-14 08:55:31] 2025-10-14 12:54:32,026 | INFO     | ..............................
[2025-10-14 08:55:31] 2025-10-14 12:54:32,026 | INFO     | . Timing measurements:
[2025-10-14 08:55:31] 2025-10-14 12:54:32,026 | INFO     | . get job = 0 s
[2025-10-14 08:55:31] 2025-10-14 12:54:32,026 | INFO     | . initial setup = 3 s
[2025-10-14 08:55:31] 2025-10-14 12:54:32,026 | INFO     | . payload setup = 9 s
[2025-10-14 08:55:31] 2025-10-14 12:54:32,026 | INFO     | . stage-in = 0 s
[2025-10-14 08:55:31] 2025-10-14 12:54:32,027 | INFO     | . payload execution = 5019 s
[2025-10-14 08:55:31] 2025-10-14 12:54:32,027 | INFO     | . stage-out = 0 s
[2025-10-14 08:55:31] 2025-10-14 12:54:32,027 | INFO     | . log creation = 0 s
[2025-10-14 08:55:31] 2025-10-14 12:54:32,027 | INFO     | ..............................
[2025-10-14 08:55:31] 2025-10-14 12:54:32,107 | INFO     | 
[2025-10-14 08:55:31] 2025-10-14 12:54:32,108 | INFO     | job summary report
[2025-10-14 08:55:31] 2025-10-14 12:54:32,108 | INFO     | --------------------------------------------------
[2025-10-14 08:55:31] 2025-10-14 12:54:32,108 | INFO     | PanDA job id: 6840854769
[2025-10-14 08:55:31] 2025-10-14 12:54:32,108 | INFO     | task id: 46676269
[2025-10-14 08:55:31] 2025-10-14 12:54:32,108 | INFO     | errors: (none)
[2025-10-14 08:55:31] 2025-10-14 12:54:32,108 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 08:55:31] 2025-10-14 12:54:32,108 | INFO     | pilot state: finished 
[2025-10-14 08:55:31] 2025-10-14 12:54:32,108 | INFO     | transexitcode: 0
[2025-10-14 08:55:31] 2025-10-14 12:54:32,108 | INFO     | exeerrorcode: 0
[2025-10-14 08:55:31] 2025-10-14 12:54:32,108 | INFO     | exeerrordiag: 
[2025-10-14 08:55:31] 2025-10-14 12:54:32,108 | INFO     | exitcode: 0
[2025-10-14 08:55:31] 2025-10-14 12:54:32,108 | INFO     | exitmsg: OK
[2025-10-14 08:55:31] 2025-10-14 12:54:32,108 | INFO     | cpuconsumptiontime: 35084 s
[2025-10-14 08:55:31] 2025-10-14 12:54:32,108 | INFO     | nevents: 400
[2025-10-14 08:55:31] 2025-10-14 12:54:32,108 | INFO     | neventsw: 0
[2025-10-14 08:55:31] 2025-10-14 12:54:32,108 | INFO     | pid: 1128705
[2025-10-14 08:55:31] 2025-10-14 12:54:32,109 | INFO     | pgrp: 1128705
[2025-10-14 08:55:31] 2025-10-14 12:54:32,109 | INFO     | corecount: 8
[2025-10-14 08:55:31] 2025-10-14 12:54:32,109 | INFO     | event service: False
[2025-10-14 08:55:31] 2025-10-14 12:54:32,109 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 5032: 2375370, 5034: 2384424, 5039: 2384562}
[2025-10-14 08:55:31] 2025-10-14 12:54:32,109 | INFO     | --------------------------------------------------
[2025-10-14 08:55:31] 2025-10-14 12:54:32,109 | INFO     | 
[2025-10-14 08:55:31] 2025-10-14 12:54:32,109 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-14 08:55:31] 2025-10-14 12:54:32,132 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 08:55:31] 2025-10-14 12:54:32,132 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 08:55:31] 2025-10-14 12:54:32,132 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 08:55:31] 2025-10-14 12:54:32,132 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 08:55:31] 2025-10-14 12:54:32,132 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 08:55:31] 2025-10-14 12:54:32,132 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 08:55:31] 2025-10-14 12:54:32,132 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 08:55:31] 2025-10-14 12:54:32,132 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 08:55:31] 2025-10-14 12:54:32,133 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 08:55:31] 2025-10-14 12:54:32,133 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 08:55:31] 2025-10-14 12:54:32,133 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 08:55:31] 2025-10-14 12:54:32,133 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 08:55:31] 2025-10-14 12:54:32,133 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 08:55:31] 2025-10-14 12:54:32,133 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 08:55:31] 2025-10-14 12:54:32,133 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 08:55:31] 2025-10-14 12:54:32,133 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 08:55:31] 2025-10-14 12:54:32,133 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 08:55:31] 2025-10-14 12:54:32,133 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 08:55:31] 2025-10-14 12:54:32,133 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 08:55:31] 2025-10-14 12:54:32,133 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 08:55:31] 2025-10-14 12:54:32,133 | INFO     | job 6840854769 has completed (purged errors)
[2025-10-14 08:55:31] 2025-10-14 12:54:32,134 | INFO     | overall cleanup function is called
[2025-10-14 08:55:31] 2025-10-14 12:54:33,142 | INFO     | --- collectZombieJob: --- 10, [1128705]
[2025-10-14 08:55:31] 2025-10-14 12:54:33,142 | INFO     | zombie collector waiting for pid 1128705
[2025-10-14 08:55:31] 2025-10-14 12:54:33,142 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 08:55:31] 2025-10-14 12:54:33,142 | INFO     | collected zombie processes
[2025-10-14 08:55:31] 2025-10-14 12:54:33,142 | INFO     | will attempt to kill all subprocesses of pid=1128705
[2025-10-14 08:55:31] 2025-10-14 12:54:33,482 | INFO     | process IDs to be killed: [1128705] (in reverse order)
[2025-10-14 08:55:31] 2025-10-14 12:54:33,598 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 08:55:31] 2025-10-14 12:54:33,599 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 08:55:31] 2025-10-14 12:54:33,613 | INFO     | did not find any defunct processes belonging to 1128705
[2025-10-14 08:55:31] 2025-10-14 12:54:33,630 | INFO     | did not find any defunct processes belonging to 1128705
[2025-10-14 08:55:31] 2025-10-14 12:54:33,631 | INFO     | ready for new job
[2025-10-14 08:55:31] 2025-10-14 12:54:33,631 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 08:55:31] 2025-10-14 12:54:33,633 | INFO     | ***************************************
[2025-10-14 08:55:31] 2025-10-14 12:54:33,633 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 08:55:31] 2025-10-14 12:54:33,633 | INFO     | ***************************************
[2025-10-14 08:55:31] 2025-10-14 12:54:33,633 | INFO     | 
[2025-10-14 08:55:31] 2025-10-14 12:54:33,639 | INFO     | architecture information:
[2025-10-14 08:55:31] 2025-10-14 12:54:33,639 | INFO     | executing command: cat /etc/os-release
[2025-10-14 08:55:31] 2025-10-14 12:54:33,658 | INFO     | cat /etc/os-release:
[2025-10-14 08:55:31] NAME="CentOS Linux"
[2025-10-14 08:55:31] VERSION="7 (Core)"
[2025-10-14 08:55:31] ID="centos"
[2025-10-14 08:55:31] ID_LIKE="rhel fedora"
[2025-10-14 08:55:31] VERSION_ID="7"
[2025-10-14 08:55:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 08:55:31] ANSI_COLOR="0;31"
[2025-10-14 08:55:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 08:55:31] HOME_URL="https://www.centos.org/"
[2025-10-14 08:55:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 08:55:31] 
[2025-10-14 08:55:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 08:55:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 08:55:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 08:55:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 08:55:31] 
[2025-10-14 08:55:31] 2025-10-14 12:54:33,658 | INFO     | ***************************************
[2025-10-14 08:55:31] 2025-10-14 12:54:34,161 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-14 08:55:31] 2025-10-14 12:54:34,182 | INFO     | sufficient remaining disk space (129818951680 B)
[2025-10-14 08:55:31] 2025-10-14 12:54:34,182 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 08:55:31] 2025-10-14 12:54:34,183 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 08:55:31] 2025-10-14 12:54:34,183 | INFO     | update_server=False
[2025-10-14 08:55:31] 2025-10-14 12:54:34,183 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 08:55:31] 2025-10-14 12:54:34,183 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 08:55:31] 2025-10-14 12:54:34,183 | INFO     | aborting loop
[2025-10-14 08:55:31] 2025-10-14 12:54:34,184 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 08:55:31] 2025-10-14 12:54:34,476 | INFO     | all data control threads have been joined
[2025-10-14 08:55:31] 2025-10-14 12:54:34,674 | INFO     | all payload control threads have been joined
[2025-10-14 08:55:31] 2025-10-14 12:54:35,182 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 08:55:31] 2025-10-14 12:54:35,189 | INFO     | [job] retrieve thread has finished
[2025-10-14 08:55:31] 2025-10-14 12:54:35,190 | INFO     | [job] job monitor thread has finished
[2025-10-14 08:55:31] 2025-10-14 12:54:35,220 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 08:55:31] 2025-10-14 12:54:35,293 | INFO     | all job control threads have been joined
[2025-10-14 08:55:31] 2025-10-14 12:54:35,325 | INFO     | [job] validate thread has finished
[2025-10-14 08:55:31] 2025-10-14 12:54:35,481 | INFO     | [data] control thread has finished
[2025-10-14 08:55:31] 2025-10-14 12:54:35,553 | INFO     | [payload] validate_post thread has finished
[2025-10-14 08:55:31] 2025-10-14 12:54:35,570 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 08:55:31] 2025-10-14 12:54:35,680 | INFO     | [payload] control thread has finished
[2025-10-14 08:55:31] 2025-10-14 12:54:36,299 | INFO     | [job] control thread has finished
[2025-10-14 08:55:31] 2025-10-14 12:54:36,383 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 08:55:31] 2025-10-14 12:54:36,434 | INFO     | [data] copytool_in thread has finished
[2025-10-14 08:55:31] 2025-10-14 12:54:36,488 | INFO     | [payload] failed_post thread has finished
[2025-10-14 08:55:31] 2025-10-14 12:54:37,119 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 08:55:31] 2025-10-14 12:54:37,187 | INFO     | [data] copytool_out thread has finished
[2025-10-14 08:55:31] 2025-10-14 12:54:38,124 | INFO     | [job] queue monitor thread has finished
[2025-10-14 08:55:31] 2025-10-14 12:54:38,191 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 08:55:31] 2025-10-14 12:54:44,399 | INFO     | job.realtimelogging is not enabled
[2025-10-14 08:55:31] 2025-10-14 12:54:45,404 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 08:55:31] 2025-10-14 12:55:04,757 | INFO     | PID=1122313 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 08:55:31] 2025-10-14 12:55:04,757 | INFO     | .. there are 16 such processes running
[2025-10-14 08:55:31] 2025-10-14 12:55:04,758 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 08:55:31] 2025-10-14 12:55:04,758 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 08:55:31] 2025-10-14 12:55:04,758 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 08:55:31] 2025-10-14 12:55:24,472 | INFO     | [monitor] cgroup control has ended
[2025-10-14 08:55:31] 2025-10-14 12:55:26,433 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140337695070016)>', '<ExcThread(monitor, started 140337351735040)>']
[2025-10-14 08:55:31] 2025-10-14 12:55:26,860 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 08:55:31] 2025-10-14 12:55:26,860 | INFO     | [monitor] control thread has ended
[2025-10-14 08:55:31] 2025-10-14 12:55:31,459 | INFO     | all workflow threads have been joined
[2025-10-14 08:55:31] 2025-10-14 12:55:31,459 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 08:55:31] 2025-10-14 12:55:31,459 | INFO     | traces error code: 0
[2025-10-14 08:55:31] 2025-10-14 12:55:31,459 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 08:55:31] 2025-10-14 12:55:31,708 [wrapper] ==== pilot stdout END ====
[2025-10-14 08:55:31] 2025-10-14 12:55:31,711 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 08:55:31] 2025-10-14 12:55:31,714 [wrapper] pilotpid: 1122313
[2025-10-14 08:55:31] 2025-10-14 12:55:31,718 [wrapper] Pilot exit status: 0
[2025-10-14 08:55:31] 2025-10-14 12:55:31,737 [wrapper] pandaids: 6840854769
[2025-10-14 08:55:31] 2025-10-14 12:55:31,828 [wrapper] cleanup supervisor_pilot 1297738 1122314
[2025-10-14 08:55:31] 2025-10-14 12:55:31,831 [wrapper] Test setup, not cleaning
[2025-10-14 08:55:31] 2025-10-14 12:55:31,834 [wrapper] apfmon messages muted
[2025-10-14 08:55:31] 2025-10-14 12:55:31,837 [wrapper] ==== wrapper stdout END ====
[2025-10-14 08:55:31] 2025-10-14 12:55:31,840 [wrapper] ==== wrapper stderr END ====
[2025-10-14 08:55:31]  *** Error codes and diagnostics ***
[2025-10-14 08:55:31]     "exeErrorCode": 0,
[2025-10-14 08:55:31]     "exeErrorDiag": "",
[2025-10-14 08:55:31]     "pilotErrorCode": 0,
[2025-10-14 08:55:31]     "pilotErrorDiag": "",
[2025-10-14 08:55:31]  *** Listing of results directory ***
[2025-10-14 08:55:31] total 415668
[2025-10-14 08:55:31] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 18:57 queuedata.json
[2025-10-14 08:55:31] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 18:57 pilot3.tar.gz
[2025-10-14 08:55:31] -rwx------. 1 boincer umatlas     36292 Oct 12 18:58 runpilot2-wrapper.sh
[2025-10-14 08:55:31] -rw-r--r--. 1 boincer umatlas       100 Oct 14 07:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 08:55:31] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 14 07:29 run_atlas
[2025-10-14 08:55:31] -rw-r--r--. 1 boincer umatlas       105 Oct 14 07:29 job.xml
[2025-10-14 08:55:31] -rw-r--r--. 2 boincer umatlas 222935576 Oct 14 07:29 EVNT.46676267._004640.pool.root.1
[2025-10-14 08:55:31] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 07:29 start_atlas.sh
[2025-10-14 08:55:31] drwxrwx--x. 2 boincer umatlas      4096 Oct 14 07:29 shared
[2025-10-14 08:55:31] -rw-r--r--. 2 boincer umatlas    569678 Oct 14 07:29 input.tar.gz
[2025-10-14 08:55:31] -rw-r--r--. 1 boincer umatlas         0 Oct 14 07:29 boinc_lockfile
[2025-10-14 08:55:31] -rw-r--r--. 1 boincer umatlas      2550 Oct 14 07:30 pandaJob.out
[2025-10-14 08:55:31] -rw-------. 1 boincer umatlas    973972 Oct 14 07:30 agis_schedconf.cvmfs.json
[2025-10-14 08:55:31] -rw-------. 1 boincer umatlas   1560580 Oct 14 07:30 agis_ddmendpoints.agis.ALL.json
[2025-10-14 08:55:31] drwx------. 5 boincer umatlas      4096 Oct 14 07:30 pilot3
[2025-10-14 08:55:31] -rw-r--r--. 1 boincer umatlas       529 Oct 14 08:53 boinc_task_state.xml
[2025-10-14 08:55:31] -rw-------. 1 boincer umatlas 196699301 Oct 14 08:53 HITS.46676269._091712.pool.root.1
[2025-10-14 08:55:31] -rw-------. 1 boincer umatlas      1041 Oct 14 08:54 memory_monitor_summary.json
[2025-10-14 08:55:31] -rw-r--r--. 1 boincer umatlas      6946 Oct 14 08:54 init_data.xml
[2025-10-14 08:55:31] -rw-------. 1 boincer umatlas    321099 Oct 14 08:54 log.46676269._091712.job.log.tgz.1
[2025-10-14 08:55:31] -rw-------. 1 boincer umatlas      7796 Oct 14 08:54 heartbeat.json
[2025-10-14 08:55:31] -rw-------. 1 boincer umatlas        95 Oct 14 08:55 pilot_heartbeat.json
[2025-10-14 08:55:31] -rw-r--r--. 1 boincer umatlas        27 Oct 14 08:55 wrapper_checkpoint.txt
[2025-10-14 08:55:31] -rw-r--r--. 1 boincer umatlas      8192 Oct 14 08:55 boinc_mmap_file
[2025-10-14 08:55:31] -rw-------. 1 boincer umatlas      4897 Oct 14 08:55 pilotlog.txt
[2025-10-14 08:55:31] -rw-------. 1 boincer umatlas    732895 Oct 14 08:55 log.46676269._091712.job.log.1
[2025-10-14 08:55:31] -rw-------. 1 boincer umatlas       357 Oct 14 08:55 output.list
[2025-10-14 08:55:31] -rw-r--r--. 1 boincer umatlas       620 Oct 14 08:55 runtime_log
[2025-10-14 08:55:31] -rw-------. 1 boincer umatlas   1075200 Oct 14 08:55 result.tar.gz
[2025-10-14 08:55:31] -rw-------. 1 boincer umatlas       653 Oct 14 08:55 XdALDmSCKS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9xlNDm9ugDPn.diag
[2025-10-14 08:55:31] -rw-r--r--. 1 boincer umatlas      8698 Oct 14 08:55 runtime_log.err
[2025-10-14 08:55:31] -rw-r--r--. 1 boincer umatlas     21766 Oct 14 08:55 stderr.txt
[2025-10-14 08:55:31] HITS file was successfully produced:
[2025-10-14 08:55:31] -rw-------. 1 boincer umatlas 196699301 Oct 14 08:53 shared/HITS.pool.root.1
[2025-10-14 08:55:31]  *** Contents of shared directory: ***
[2025-10-14 08:55:31] total 411436
[2025-10-14 08:55:31] -rw-r--r--. 2 boincer umatlas 222935576 Oct 14 07:29 ATLAS.root_0
[2025-10-14 08:55:31] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 07:29 start_atlas.sh
[2025-10-14 08:55:31] -rw-r--r--. 2 boincer umatlas    569678 Oct 14 07:29 input.tar.gz
[2025-10-14 08:55:31] -rw-------. 1 boincer umatlas 196699301 Oct 14 08:53 HITS.pool.root.1
[2025-10-14 08:55:31] -rw-------. 1 boincer umatlas   1075200 Oct 14 08:55 result.tar.gz
08:55:33 (1116338): run_atlas exited; CPU time 35148.123090
08:55:33 (1116338): called boinc_finish(0)

</stderr_txt>
]]>

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