Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:30:15 (3203996): wrapper (7.7.26015): starting
06:30:15 (3203996): wrapper: running run_atlas (--nthreads 12)
[2025-10-14 06:30:15] Arguments: --nthreads 12
[2025-10-14 06:30:15] Threads: 12
[2025-10-14 06:30:15] Checking for CVMFS
[2025-10-14 06:30:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 06:30:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 06:30:15] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 06:30:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 06:30:16] 2.13.2.0 3214202 132022 758476 151694 1 281 22645142 25181184 19919 16776704 0 114949146 99.549 130221722 23010 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-14 06:30:16] CVMFS is ok
[2025-10-14 06:30:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 06:30:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 06:30:16] Further information can be found at the LHC@home message board.
[2025-10-14 06:30:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 06:30:16] Checking for apptainer binary...
[2025-10-14 06:30:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 06:30:16] Running /usr/bin/apptainer --version
[2025-10-14 06:30:16] apptainer version 1.4.3-1.el9
[2025-10-14 06:30:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 06:30:16] c-16-37.aglt2.org
[2025-10-14 06:30:16] apptainer works
[2025-10-14 06:30:16] Set ATHENA_PROC_NUMBER=12
[2025-10-14 06:30:16] Set ATHENA_CORE_NUMBER=12
[2025-10-14 06:30:16] Starting ATLAS job with PandaID=6839474934
[2025-10-14 06:30:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 11:20:17]  *** The last 200 lines of the pilot log: ***
[2025-10-14 11:20:17] 2025-10-14 15:19:24,972 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 11:20:17] 2025-10-14 15:19:24,991 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2669.7653958333335
[2025-10-14 11:20:17] 2025-10-14 15:19:25,014 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839474934/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 11:20:17] 2025-10-14 15:19:25,015 | INFO     | extracted standard info from prmon json
[2025-10-14 11:20:17] 2025-10-14 15:19:25,015 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 11:20:17] 2025-10-14 15:19:25,016 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 11:20:17] 2025-10-14 15:19:25,016 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 11:20:17] 2025-10-14 15:19:25,016 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 11:20:17] 2025-10-14 15:19:25,028 | INFO     | fitting pss+swap vs Time
[2025-10-14 11:20:17] 2025-10-14 15:19:25,035 | INFO     | sum of square deviations: 7102876222.873235
[2025-10-14 11:20:17] 2025-10-14 15:19:25,038 | INFO     | sum of deviations: -33355689299.901413
[2025-10-14 11:20:17] 2025-10-14 15:19:25,038 | INFO     | mean x: 1760446501.5211267
[2025-10-14 11:20:17] 2025-10-14 15:19:25,038 | INFO     | mean y: 2341977.3169014086
[2025-10-14 11:20:17] 2025-10-14 15:19:25,038 | INFO     | -- intersect: 8269543135.171728
[2025-10-14 11:20:17] 2025-10-14 15:19:25,038 | INFO     | intersect: 8269543135.171728
[2025-10-14 11:20:17] 2025-10-14 15:19:25,039 | INFO     | chi2: 2.93705060722118
[2025-10-14 11:20:17] 2025-10-14 15:19:25,040 | INFO     | sum of square deviations: 6734329409.770595
[2025-10-14 11:20:17] 2025-10-14 15:19:25,042 | INFO     | sum of deviations: -13669398234.752699
[2025-10-14 11:20:17] 2025-10-14 15:19:25,042 | INFO     | mean x: 1760446349.028674
[2025-10-14 11:20:17] 2025-10-14 15:19:25,042 | INFO     | mean y: 2350027.3440860217
[2025-10-14 11:20:17] 2025-10-14 15:19:25,042 | INFO     | -- intersect: 3575718770.024753
[2025-10-14 11:20:17] 2025-10-14 15:19:25,042 | INFO     | intersect: 3575718770.024753
[2025-10-14 11:20:17] 2025-10-14 15:19:25,043 | INFO     | chi2: 2.2677594355111323
[2025-10-14 11:20:17] 2025-10-14 15:19:25,043 | INFO     | current chi2=2.2677594355111323 (change=22.787866510181846 %)
[2025-10-14 11:20:17] 2025-10-14 15:19:25,043 | INFO     | right removable region: 278
[2025-10-14 11:20:17] 2025-10-14 15:19:25,044 | INFO     | sum of square deviations: 6734204112.566306
[2025-10-14 11:20:17] 2025-10-14 15:19:25,046 | INFO     | sum of deviations: -79469375472.96416
[2025-10-14 11:20:17] 2025-10-14 15:19:25,046 | INFO     | mean x: 1760446654.0394266
[2025-10-14 11:20:17] 2025-10-14 15:19:25,047 | INFO     | mean y: 2360942.7240143367
[2025-10-14 11:20:17] 2025-10-14 15:19:25,047 | INFO     | -- intersect: 20777139047.37344
[2025-10-14 11:20:17] 2025-10-14 15:19:25,047 | INFO     | intersect: 20777139047.37344
[2025-10-14 11:20:17] 2025-10-14 15:19:25,047 | INFO     | chi2: 1.3640864721778372
[2025-10-14 11:20:17] 2025-10-14 15:19:25,047 | INFO     | current chi2=1.3640864721778372 (change=53.555908474167055 %)
[2025-10-14 11:20:17] 2025-10-14 15:19:25,048 | INFO     | sum of square deviations: 6378508989.565734
[2025-10-14 11:20:17] 2025-10-14 15:19:25,050 | INFO     | sum of deviations: -70400130378.22992
[2025-10-14 11:20:17] 2025-10-14 15:19:25,051 | INFO     | mean x: 1760446806.5583942
[2025-10-14 11:20:17] 2025-10-14 15:19:25,051 | INFO     | mean y: 2357024.295620438
[2025-10-14 11:20:17] 2025-10-14 15:19:25,051 | INFO     | -- intersect: 19432553784.759438
[2025-10-14 11:20:17] 2025-10-14 15:19:25,051 | INFO     | intersect: 19432553784.759438
[2025-10-14 11:20:17] 2025-10-14 15:19:25,051 | INFO     | chi2: 1.314981145899528
[2025-10-14 11:20:17] 2025-10-14 15:19:25,052 | INFO     | current chi2=1.314981145899528 (change=3.599869017094637 %)
[2025-10-14 11:20:17] 2025-10-14 15:19:25,052 | INFO     | left removable region: 20
[2025-10-14 11:20:17] 2025-10-14 15:19:25,052 | INFO     | sum of square deviations: 5325075885.379869
[2025-10-14 11:20:17] 2025-10-14 15:19:25,054 | INFO     | sum of deviations: -22472759044.573677
[2025-10-14 11:20:17] 2025-10-14 15:19:25,054 | INFO     | mean x: 1760446928.5658915
[2025-10-14 11:20:17] 2025-10-14 15:19:25,055 | INFO     | mean y: 2352842.798449612
[2025-10-14 11:20:17] 2025-10-14 15:19:25,055 | INFO     | -- intersect: 7431749247.277836
[2025-10-14 11:20:17] 2025-10-14 15:19:25,055 | INFO     | intersect: 7431749247.277836
[2025-10-14 11:20:17] 2025-10-14 15:19:25,055 | INFO     | chi2: 0.4884048631812998
[2025-10-14 11:20:17] 2025-10-14 15:19:25,056 | INFO     | -- intersect: 7431749247.277836
[2025-10-14 11:20:17] 2025-10-14 15:19:25,056 | INFO     | current memory leak: -4.22 B/s (using 258 data points, chi2=0.49)
[2025-10-14 11:20:17] 2025-10-14 15:19:25,056 | INFO     | could have reported an average CPU frequency of 2672 MHz (13 samples)
[2025-10-14 11:20:17] 2025-10-14 15:19:25,057 | INFO     | ..............................
[2025-10-14 11:20:17] 2025-10-14 15:19:25,057 | INFO     | . Timing measurements:
[2025-10-14 11:20:17] 2025-10-14 15:19:25,057 | INFO     | . get job = 0 s
[2025-10-14 11:20:17] 2025-10-14 15:19:25,057 | INFO     | . initial setup = 3 s
[2025-10-14 11:20:17] 2025-10-14 15:19:25,057 | INFO     | . payload setup = 7 s
[2025-10-14 11:20:17] 2025-10-14 15:19:25,057 | INFO     | . stage-in = 0 s
[2025-10-14 11:20:17] 2025-10-14 15:19:25,057 | INFO     | . payload execution = 17274 s
[2025-10-14 11:20:17] 2025-10-14 15:19:25,058 | INFO     | . stage-out = 3 s
[2025-10-14 11:20:17] 2025-10-14 15:19:25,058 | INFO     | . log creation = 0 s
[2025-10-14 11:20:17] 2025-10-14 15:19:25,058 | INFO     | ..............................
[2025-10-14 11:20:17] 2025-10-14 15:19:25,185 | INFO     | time since job start (17326s) is within the limit (172800.0s)
[2025-10-14 11:20:17] 2025-10-14 15:19:25,368 | INFO     | 
[2025-10-14 11:20:17] 2025-10-14 15:19:25,369 | INFO     | job summary report
[2025-10-14 11:20:17] 2025-10-14 15:19:25,369 | INFO     | --------------------------------------------------
[2025-10-14 11:20:17] 2025-10-14 15:19:25,369 | INFO     | PanDA job id: 6839474934
[2025-10-14 11:20:17] 2025-10-14 15:19:25,369 | INFO     | task id: 46676269
[2025-10-14 11:20:17] 2025-10-14 15:19:25,369 | INFO     | errors: (none)
[2025-10-14 11:20:17] 2025-10-14 15:19:25,369 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 11:20:17] 2025-10-14 15:19:25,369 | INFO     | pilot state: finished 
[2025-10-14 11:20:17] 2025-10-14 15:19:25,369 | INFO     | transexitcode: 0
[2025-10-14 11:20:17] 2025-10-14 15:19:25,370 | INFO     | exeerrorcode: 0
[2025-10-14 11:20:17] 2025-10-14 15:19:25,370 | INFO     | exeerrordiag: 
[2025-10-14 11:20:17] 2025-10-14 15:19:25,370 | INFO     | exitcode: 0
[2025-10-14 11:20:17] 2025-10-14 15:19:25,370 | INFO     | exitmsg: OK
[2025-10-14 11:20:17] 2025-10-14 15:19:25,370 | INFO     | cpuconsumptiontime: 62337 s
[2025-10-14 11:20:17] 2025-10-14 15:19:25,370 | INFO     | nevents: 400
[2025-10-14 11:20:17] 2025-10-14 15:19:25,370 | INFO     | neventsw: 0
[2025-10-14 11:20:17] 2025-10-14 15:19:25,370 | INFO     | pid: 3215644
[2025-10-14 11:20:17] 2025-10-14 15:19:25,370 | INFO     | pgrp: 3215644
[2025-10-14 11:20:17] 2025-10-14 15:19:25,371 | INFO     | corecount: 12
[2025-10-14 11:20:17] 2025-10-14 15:19:25,371 | INFO     | event service: False
[2025-10-14 11:20:17] 2025-10-14 15:19:25,371 | INFO     | sizes: {0: 2348686, 1: 2348885, 6: 2349147, 11: 2349175, 17285: 2380944, 17289: 2390006, 17290: 2390190, 17310: 2390384}
[2025-10-14 11:20:17] 2025-10-14 15:19:25,371 | INFO     | --------------------------------------------------
[2025-10-14 11:20:17] 2025-10-14 15:19:25,371 | INFO     | 
[2025-10-14 11:20:17] 2025-10-14 15:19:25,371 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-14 11:20:17] 2025-10-14 15:19:25,590 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 11:20:17] 2025-10-14 15:19:25,591 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 11:20:17] 2025-10-14 15:19:25,591 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 11:20:17] 2025-10-14 15:19:25,591 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 11:20:17] 2025-10-14 15:19:25,591 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 11:20:17] 2025-10-14 15:19:25,591 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 11:20:17] 2025-10-14 15:19:25,591 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 11:20:17] 2025-10-14 15:19:25,591 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 11:20:17] 2025-10-14 15:19:25,591 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 11:20:17] 2025-10-14 15:19:25,592 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 11:20:17] 2025-10-14 15:19:25,592 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 11:20:17] 2025-10-14 15:19:25,592 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 11:20:17] 2025-10-14 15:19:25,592 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 11:20:17] 2025-10-14 15:19:25,592 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 11:20:17] 2025-10-14 15:19:25,592 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 11:20:17] 2025-10-14 15:19:25,592 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 11:20:17] 2025-10-14 15:19:25,592 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 11:20:17] 2025-10-14 15:19:25,593 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 11:20:17] 2025-10-14 15:19:25,593 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 11:20:17] 2025-10-14 15:19:25,593 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 11:20:17] 2025-10-14 15:19:25,593 | INFO     | job 6839474934 has completed (purged errors)
[2025-10-14 11:20:17] 2025-10-14 15:19:25,604 | INFO     | overall cleanup function is called
[2025-10-14 11:20:17] 2025-10-14 15:19:26,633 | INFO     | --- collectZombieJob: --- 10, [3215644]
[2025-10-14 11:20:17] 2025-10-14 15:19:26,658 | INFO     | zombie collector waiting for pid 3215644
[2025-10-14 11:20:17] 2025-10-14 15:19:26,658 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 11:20:17] 2025-10-14 15:19:26,659 | INFO     | collected zombie processes
[2025-10-14 11:20:17] 2025-10-14 15:19:26,659 | INFO     | will attempt to kill all subprocesses of pid=3215644
[2025-10-14 11:20:17] 2025-10-14 15:19:27,768 | INFO     | PID=3209118 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-14 11:20:17] 2025-10-14 15:19:27,768 | INFO     | .. there are 33 such processes running
[2025-10-14 11:20:17] 2025-10-14 15:19:28,267 | INFO     | process IDs to be killed: [3215644] (in reverse order)
[2025-10-14 11:20:17] 2025-10-14 15:19:28,482 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 11:20:17] 2025-10-14 15:19:28,483 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 11:20:17] 2025-10-14 15:19:28,519 | INFO     | did not find any defunct processes belonging to 3215644
[2025-10-14 11:20:17] 2025-10-14 15:19:28,535 | INFO     | did not find any defunct processes belonging to 3215644
[2025-10-14 11:20:17] 2025-10-14 15:19:28,536 | INFO     | ready for new job
[2025-10-14 11:20:17] 2025-10-14 15:19:28,536 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 11:20:17] 2025-10-14 15:19:28,553 | INFO     | ***************************************
[2025-10-14 11:20:17] 2025-10-14 15:19:28,553 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 11:20:17] 2025-10-14 15:19:28,553 | INFO     | ***************************************
[2025-10-14 11:20:17] 2025-10-14 15:19:28,553 | INFO     | 
[2025-10-14 11:20:17] 2025-10-14 15:19:28,570 | INFO     | architecture information:
[2025-10-14 11:20:17] 2025-10-14 15:19:28,571 | INFO     | executing command: cat /etc/os-release
[2025-10-14 11:20:17] 2025-10-14 15:19:28,595 | INFO     | cat /etc/os-release:
[2025-10-14 11:20:17] NAME="CentOS Linux"
[2025-10-14 11:20:17] VERSION="7 (Core)"
[2025-10-14 11:20:17] ID="centos"
[2025-10-14 11:20:17] ID_LIKE="rhel fedora"
[2025-10-14 11:20:17] VERSION_ID="7"
[2025-10-14 11:20:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 11:20:17] ANSI_COLOR="0;31"
[2025-10-14 11:20:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 11:20:17] HOME_URL="https://www.centos.org/"
[2025-10-14 11:20:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 11:20:17] 
[2025-10-14 11:20:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 11:20:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 11:20:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 11:20:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 11:20:17] 
[2025-10-14 11:20:17] 2025-10-14 15:19:28,595 | INFO     | ***************************************
[2025-10-14 11:20:17] 2025-10-14 15:19:29,100 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-14 11:20:17] 2025-10-14 15:19:29,155 | INFO     | sufficient remaining disk space (64527269888 B)
[2025-10-14 11:20:17] 2025-10-14 15:19:29,156 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 11:20:17] 2025-10-14 15:19:29,156 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 11:20:17] 2025-10-14 15:19:29,156 | INFO     | update_server=False
[2025-10-14 11:20:17] 2025-10-14 15:19:29,156 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 11:20:17] 2025-10-14 15:19:29,344 | INFO     | all data control threads have been joined
[2025-10-14 11:20:17] 2025-10-14 15:19:29,701 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 11:20:17] 2025-10-14 15:19:29,703 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 11:20:17] 2025-10-14 15:19:29,703 | INFO     | aborting loop
[2025-10-14 11:20:17] 2025-10-14 15:19:29,868 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 11:20:17] 2025-10-14 15:19:30,130 | INFO     | all job control threads have been joined
[2025-10-14 11:20:17] 2025-10-14 15:19:30,162 | INFO     | [job] retrieve thread has finished
[2025-10-14 11:20:17] 2025-10-14 15:19:30,344 | INFO     | all payload control threads have been joined
[2025-10-14 11:20:17] 2025-10-14 15:19:30,350 | INFO     | [data] control thread has finished
[2025-10-14 11:20:17] 2025-10-14 15:19:30,416 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 11:20:17] 2025-10-14 15:19:30,494 | INFO     | [payload] validate_post thread has finished
[2025-10-14 11:20:17] 2025-10-14 15:19:30,501 | INFO     | [data] copytool_in thread has finished
[2025-10-14 11:20:17] 2025-10-14 15:19:30,629 | INFO     | [job] validate thread has finished
[2025-10-14 11:20:17] 2025-10-14 15:19:30,709 | INFO     | [job] job monitor thread has finished
[2025-10-14 11:20:17] 2025-10-14 15:19:30,859 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 11:20:17] 2025-10-14 15:19:30,869 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 11:20:17] 2025-10-14 15:19:31,136 | INFO     | [job] control thread has finished
[2025-10-14 11:20:17] 2025-10-14 15:19:31,223 | INFO     | [payload] failed_post thread has finished
[2025-10-14 11:20:17] 2025-10-14 15:19:31,349 | INFO     | [payload] control thread has finished
[2025-10-14 11:20:17] 2025-10-14 15:19:31,423 | INFO     | [job] queue monitor thread has finished
[2025-10-14 11:20:17] 2025-10-14 15:19:31,483 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 11:20:17] 2025-10-14 15:19:31,520 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 11:20:17] 2025-10-14 15:19:31,879 | INFO     | [data] copytool_out thread has finished
[2025-10-14 11:20:17] 2025-10-14 15:19:33,710 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 11:20:17] 2025-10-14 15:20:00,469 | INFO     | PID=3209118 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 11:20:17] 2025-10-14 15:20:00,469 | INFO     | .. there are 33 such processes running
[2025-10-14 11:20:17] 2025-10-14 15:20:00,470 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 11:20:17] 2025-10-14 15:20:00,470 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 11:20:17] 2025-10-14 15:20:00,470 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 11:20:17] 2025-10-14 15:20:10,954 | INFO     | [monitor] cgroup control has ended
[2025-10-14 11:20:17] 2025-10-14 15:20:11,511 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139728243722048)>', '<ExcThread(monitor, started 139727608989440)>']
[2025-10-14 11:20:17] 2025-10-14 15:20:11,535 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 11:20:17] 2025-10-14 15:20:11,535 | INFO     | [monitor] control thread has ended
[2025-10-14 11:20:17] 2025-10-14 15:20:16,537 | INFO     | all workflow threads have been joined
[2025-10-14 11:20:17] 2025-10-14 15:20:16,537 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 11:20:17] 2025-10-14 15:20:16,537 | INFO     | traces error code: 0
[2025-10-14 11:20:17] 2025-10-14 15:20:16,538 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 11:20:17] 2025-10-14 15:20:16,744 [wrapper] ==== pilot stdout END ====
[2025-10-14 11:20:17] 2025-10-14 15:20:16,749 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 11:20:17] 2025-10-14 15:20:16,753 [wrapper] pilotpid: 3209118
[2025-10-14 11:20:17] 2025-10-14 15:20:16,756 [wrapper] Pilot exit status: 0
[2025-10-14 11:20:17] 2025-10-14 15:20:16,770 [wrapper] pandaids: 6839474934
[2025-10-14 11:20:17] 2025-10-14 15:20:16,879 [wrapper] cleanup supervisor_pilot 3935207 3209119
[2025-10-14 11:20:17] 2025-10-14 15:20:16,891 [wrapper] Test setup, not cleaning
[2025-10-14 11:20:17] 2025-10-14 15:20:16,896 [wrapper] apfmon messages muted
[2025-10-14 11:20:17] 2025-10-14 15:20:16,900 [wrapper] ==== wrapper stdout END ====
[2025-10-14 11:20:17] 2025-10-14 15:20:16,904 [wrapper] ==== wrapper stderr END ====
[2025-10-14 11:20:17]  *** Error codes and diagnostics ***
[2025-10-14 11:20:17]     "exeErrorCode": 0,
[2025-10-14 11:20:17]     "exeErrorDiag": "",
[2025-10-14 11:20:17]     "pilotErrorCode": 0,
[2025-10-14 11:20:17]     "pilotErrorDiag": "",
[2025-10-14 11:20:17]  *** Listing of results directory ***
[2025-10-14 11:20:17] total 416544
[2025-10-14 11:20:17] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 00:38 pilot3.tar.gz
[2025-10-14 11:20:17] -rwx------. 1 boincer umatlas     36292 Oct 12 01:15 runpilot2-wrapper.sh
[2025-10-14 11:20:17] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 01:15 queuedata.json
[2025-10-14 11:20:17] -rw-r--r--. 1 boincer umatlas       100 Oct 14 06:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 11:20:17] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 14 06:30 run_atlas
[2025-10-14 11:20:17] -rw-r--r--. 1 boincer umatlas       105 Oct 14 06:30 job.xml
[2025-10-14 11:20:17] -rw-r--r--. 2 boincer umatlas 221463393 Oct 14 06:30 EVNT.46676267._004312.pool.root.1
[2025-10-14 11:20:17] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 06:30 start_atlas.sh
[2025-10-14 11:20:17] drwxrwx--x. 2 boincer umatlas      4096 Oct 14 06:30 shared
[2025-10-14 11:20:17] -rw-r--r--. 2 boincer umatlas    569678 Oct 14 06:30 input.tar.gz
[2025-10-14 11:20:17] -rw-r--r--. 1 boincer umatlas         0 Oct 14 06:30 boinc_lockfile
[2025-10-14 11:20:17] -rw-r--r--. 1 boincer umatlas      2550 Oct 14 06:30 pandaJob.out
[2025-10-14 11:20:17] -rw-------. 1 boincer umatlas    972845 Oct 14 06:30 agis_schedconf.cvmfs.json
[2025-10-14 11:20:17] drwx------. 5 boincer umatlas      4096 Oct 14 06:30 pilot3
[2025-10-14 11:20:17] -rw-------. 1 boincer umatlas 195910732 Oct 14 11:18 HITS.46676269._071692.pool.root.1
[2025-10-14 11:20:17] -rw-r--r--. 1 boincer umatlas       531 Oct 14 11:18 boinc_task_state.xml
[2025-10-14 11:20:17] -rw-------. 1 boincer umatlas      1043 Oct 14 11:18 memory_monitor_summary.json
[2025-10-14 11:20:17] -rw-------. 1 boincer umatlas   1560740 Oct 14 11:19 agis_ddmendpoints.agis.ALL.json
[2025-10-14 11:20:17] -rw-------. 1 boincer umatlas    558828 Oct 14 11:19 log.46676269._071692.job.log.tgz.1
[2025-10-14 11:20:17] -rw-------. 1 boincer umatlas        95 Oct 14 11:19 pilot_heartbeat.json
[2025-10-14 11:20:17] -rw-------. 1 boincer umatlas      7825 Oct 14 11:19 heartbeat.json
[2025-10-14 11:20:17] -rw-r--r--. 1 boincer umatlas      6613 Oct 14 11:19 init_data.xml
[2025-10-14 11:20:17] -rw-r--r--. 1 boincer umatlas      8192 Oct 14 11:20 boinc_mmap_file
[2025-10-14 11:20:17] -rw-r--r--. 1 boincer umatlas        28 Oct 14 11:20 wrapper_checkpoint.txt
[2025-10-14 11:20:17] -rw-------. 1 boincer umatlas      4824 Oct 14 11:20 pilotlog.txt
[2025-10-14 11:20:17] -rw-------. 1 boincer umatlas   2069009 Oct 14 11:20 log.46676269._071692.job.log.1
[2025-10-14 11:20:17] -rw-------. 1 boincer umatlas       357 Oct 14 11:20 output.list
[2025-10-14 11:20:17] -rw-r--r--. 1 boincer umatlas       620 Oct 14 11:20 runtime_log
[2025-10-14 11:20:17] -rw-------. 1 boincer umatlas   2652160 Oct 14 11:20 result.tar.gz
[2025-10-14 11:20:17] -rw-------. 1 boincer umatlas       656 Oct 14 11:20 VO6MDm4b3R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmMHTMDmdpULjn.diag
[2025-10-14 11:20:17] -rw-r--r--. 1 boincer umatlas      8701 Oct 14 11:20 runtime_log.err
[2025-10-14 11:20:17] -rw-r--r--. 1 boincer umatlas     21274 Oct 14 11:20 stderr.txt
[2025-10-14 11:20:17] HITS file was successfully produced:
[2025-10-14 11:20:17] -rw-------. 1 boincer umatlas 195910732 Oct 14 11:18 shared/HITS.pool.root.1
[2025-10-14 11:20:17]  *** Contents of shared directory: ***
[2025-10-14 11:20:17] total 410772
[2025-10-14 11:20:17] -rw-r--r--. 2 boincer umatlas 221463393 Oct 14 06:30 ATLAS.root_0
[2025-10-14 11:20:17] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 06:30 start_atlas.sh
[2025-10-14 11:20:17] -rw-r--r--. 2 boincer umatlas    569678 Oct 14 06:30 input.tar.gz
[2025-10-14 11:20:17] -rw-------. 1 boincer umatlas 195910732 Oct 14 11:18 HITS.pool.root.1
[2025-10-14 11:20:17] -rw-------. 1 boincer umatlas   2652160 Oct 14 11:20 result.tar.gz
11:20:38 (3203996): run_atlas exited; CPU time 63005.843365
11:20:38 (3203996): called boinc_finish(0)

</stderr_txt>
]]>

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