Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:03:56 (2692619): wrapper (7.7.26015): starting
06:03:56 (2692619): wrapper: running run_atlas (--nthreads 8)
[2025-10-14 06:03:56] Arguments: --nthreads 8
[2025-10-14 06:03:56] Threads: 8
[2025-10-14 06:03:56] Checking for CVMFS
[2025-10-14 06:03:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 06:03:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 06:03:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 06:03:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 06:03:56] 2.13.2.0 2021324 41497 180604 151692 2 26 18143715 25181184 230 16776704 0 137911701 99.630 131386651 26185 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-14 06:03:56] CVMFS is ok
[2025-10-14 06:03:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 06:03:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 06:03:56] Further information can be found at the LHC@home message board.
[2025-10-14 06:03:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 06:03:56] Checking for apptainer binary...
[2025-10-14 06:03:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 06:03:56] Running /usr/bin/apptainer --version
[2025-10-14 06:03:56] apptainer version 1.4.3-1.el9
[2025-10-14 06:03:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 06:03:56] c-16-34.aglt2.org
[2025-10-14 06:03:56] apptainer works
[2025-10-14 06:03:56] Set ATHENA_PROC_NUMBER=8
[2025-10-14 06:03:56] Set ATHENA_CORE_NUMBER=8
[2025-10-14 06:03:56] Starting ATLAS job with PandaID=6844098084
[2025-10-14 06:03:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 07:25:16]  *** The last 200 lines of the pilot log: ***
[2025-10-14 07:25:16]  is_tar=False
[2025-10-14 07:25:16]  lfn=log.46676269._097164.job.log.tgz.1
[2025-10-14 07:25:16]  mtime=0
[2025-10-14 07:25:16]  protocol_id=None
[2025-10-14 07:25:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-14 07:25:16]  replicas=None
[2025-10-14 07:25:16]  scope=mc23_13p6TeV
[2025-10-14 07:25:16]  status=None
[2025-10-14 07:25:16]  status_code=0
[2025-10-14 07:25:16]  storage_token=
[2025-10-14 07:25:16]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6844098084/log.46676269._097164.job.log.tgz.1
[2025-10-14 07:25:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/e3/log.46676269._097164.job.log.tgz.1
[2025-10-14 07:25:16]  workdir=None
[2025-10-14 07:25:16] ]
[2025-10-14 07:25:16] 2025-10-14 11:24:33,523 | INFO     | transferring file log.46676269._097164.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6844098084/log.46676269._097164.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-14 07:25:16] 2025-10-14 11:24:33,523 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6844098084/log.46676269._097164.job.log.tgz.1 /tmp/boinchome/slots/1/log.46676269._097164.job
[2025-10-14 07:25:16] 2025-10-14 11:24:33,533 | INFO     | adding to output.list: log.46676269._097164.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/e3/log.46676269._097164.job.log.tg
[2025-10-14 07:25:16] 2025-10-14 11:24:33,534 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-14 07:25:16] 2025-10-14 11:24:33,534 | INFO     | summary of transferred files:
[2025-10-14 07:25:16] 2025-10-14 11:24:33,534 | INFO     |  -- lfn=log.46676269._097164.job.log.tgz.1, status_code=0, status=transferred
[2025-10-14 07:25:16] 2025-10-14 11:24:33,534 | INFO     | stage-out finished correctly
[2025-10-14 07:25:16] 2025-10-14 11:24:33,593 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-14 07:25:16] 2025-10-14 11:24:33,641 | INFO     | job 6844098084 has state=finished
[2025-10-14 07:25:16] 2025-10-14 11:24:33,641 | INFO     | preparing for final server update for job 6844098084 in state='finished'
[2025-10-14 07:25:16] 2025-10-14 11:24:33,642 | INFO     | this job has now completed (state=finished)
[2025-10-14 07:25:16] 2025-10-14 11:24:33,642 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-14 07:25:16] 2025-10-14 11:24:33,642 | INFO     | log transfer has been attempted: DONE
[2025-10-14 07:25:16] 2025-10-14 11:24:33,642 | INFO     | job 6844098084 has finished - writing final server update
[2025-10-14 07:25:16] 2025-10-14 11:24:33,642 | INFO     | total number of processed events: 400 (read)
[2025-10-14 07:25:16] 2025-10-14 11:24:33,643 | INFO     | executing command: lscpu
[2025-10-14 07:25:16] 2025-10-14 11:24:33,678 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-14 07:25:16] 2025-10-14 11:24:34,100 | INFO     | time since job start (4830s) is within the limit (172800.0s)
[2025-10-14 07:25:16] 2025-10-14 11:24:34,124 | INFO     | monitor loop #358: job 0:6844098084 is in state 'finished'
[2025-10-14 07:25:16] 2025-10-14 11:24:34,124 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 07:25:16] 2025-10-14 11:24:35,332 | INFO     | PID=2698677 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 07:25:16] 2025-10-14 11:24:35,333 | INFO     | .. there are 5 such processes running
[2025-10-14 07:25:16] 2025-10-14 11:24:36,092 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 07:25:16] 2025-10-14 11:24:36,096 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 3143.795083333333
[2025-10-14 07:25:16] 2025-10-14 11:24:36,101 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6844098084/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 07:25:16] 2025-10-14 11:24:36,102 | INFO     | extracted standard info from prmon json
[2025-10-14 07:25:16] 2025-10-14 11:24:36,102 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 07:25:16] 2025-10-14 11:24:36,102 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 07:25:16] 2025-10-14 11:24:36,102 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 07:25:16] 2025-10-14 11:24:36,102 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 07:25:16] 2025-10-14 11:24:36,103 | INFO     | fitting pss+swap vs Time
[2025-10-14 07:25:16] 2025-10-14 11:24:36,103 | INFO     | sum of square deviations: 115715658.0
[2025-10-14 07:25:16] 2025-10-14 11:24:36,103 | INFO     | sum of deviations: -1136098007.5
[2025-10-14 07:25:16] 2025-10-14 11:24:36,104 | INFO     | mean x: 1760438734.5
[2025-10-14 07:25:16] 2025-10-14 11:24:36,104 | INFO     | mean y: 2180784.625
[2025-10-14 07:25:16] 2025-10-14 11:24:36,104 | INFO     | -- intersect: 17286193796.859447
[2025-10-14 07:25:16] 2025-10-14 11:24:36,104 | INFO     | intersect: 17286193796.859447
[2025-10-14 07:25:16] 2025-10-14 11:24:36,104 | INFO     | chi2: 0.02212723426286585
[2025-10-14 07:25:16] 2025-10-14 11:24:36,104 | INFO     | -- intersect: 17286193796.859447
[2025-10-14 07:25:16] 2025-10-14 11:24:36,104 | INFO     | current memory leak: -9.82 B/s (using 72 data points, chi2=0.02)
[2025-10-14 07:25:16] 2025-10-14 11:24:36,104 | INFO     | could have reported an average CPU frequency of 3129 MHz (6 samples)
[2025-10-14 07:25:16] 2025-10-14 11:24:36,104 | INFO     | ..............................
[2025-10-14 07:25:16] 2025-10-14 11:24:36,104 | INFO     | . Timing measurements:
[2025-10-14 07:25:16] 2025-10-14 11:24:36,104 | INFO     | . get job = 0 s
[2025-10-14 07:25:16] 2025-10-14 11:24:36,104 | INFO     | . initial setup = 2 s
[2025-10-14 07:25:16] 2025-10-14 11:24:36,105 | INFO     | . payload setup = 3 s
[2025-10-14 07:25:16] 2025-10-14 11:24:36,105 | INFO     | . stage-in = 0 s
[2025-10-14 07:25:16] 2025-10-14 11:24:36,105 | INFO     | . payload execution = 4807 s
[2025-10-14 07:25:16] 2025-10-14 11:24:36,105 | INFO     | . stage-out = 0 s
[2025-10-14 07:25:16] 2025-10-14 11:24:36,105 | INFO     | . log creation = 0 s
[2025-10-14 07:25:16] 2025-10-14 11:24:36,105 | INFO     | ..............................
[2025-10-14 07:25:16] 2025-10-14 11:24:36,155 | INFO     | 
[2025-10-14 07:25:16] 2025-10-14 11:24:36,156 | INFO     | job summary report
[2025-10-14 07:25:16] 2025-10-14 11:24:36,156 | INFO     | --------------------------------------------------
[2025-10-14 07:25:16] 2025-10-14 11:24:36,156 | INFO     | PanDA job id: 6844098084
[2025-10-14 07:25:16] 2025-10-14 11:24:36,156 | INFO     | task id: 46676269
[2025-10-14 07:25:16] 2025-10-14 11:24:36,156 | INFO     | errors: (none)
[2025-10-14 07:25:16] 2025-10-14 11:24:36,156 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 07:25:16] 2025-10-14 11:24:36,156 | INFO     | pilot state: finished 
[2025-10-14 07:25:16] 2025-10-14 11:24:36,156 | INFO     | transexitcode: 0
[2025-10-14 07:25:16] 2025-10-14 11:24:36,156 | INFO     | exeerrorcode: 0
[2025-10-14 07:25:16] 2025-10-14 11:24:36,156 | INFO     | exeerrordiag: 
[2025-10-14 07:25:16] 2025-10-14 11:24:36,156 | INFO     | exitcode: 0
[2025-10-14 07:25:16] 2025-10-14 11:24:36,156 | INFO     | exitmsg: OK
[2025-10-14 07:25:16] 2025-10-14 11:24:36,156 | INFO     | cpuconsumptiontime: 36360 s
[2025-10-14 07:25:16] 2025-10-14 11:24:36,156 | INFO     | nevents: 400
[2025-10-14 07:25:16] 2025-10-14 11:24:36,156 | INFO     | neventsw: 0
[2025-10-14 07:25:16] 2025-10-14 11:24:36,156 | INFO     | pid: 2723027
[2025-10-14 07:25:16] 2025-10-14 11:24:36,157 | INFO     | pgrp: 2723027
[2025-10-14 07:25:16] 2025-10-14 11:24:36,157 | INFO     | corecount: 8
[2025-10-14 07:25:16] 2025-10-14 11:24:36,157 | INFO     | event service: False
[2025-10-14 07:25:16] 2025-10-14 11:24:36,157 | INFO     | sizes: {0: 2348636, 1: 2348835, 3: 2349097, 11: 2349125, 4814: 2375420, 4815: 2384602, 4818: 2384740}
[2025-10-14 07:25:16] 2025-10-14 11:24:36,157 | INFO     | --------------------------------------------------
[2025-10-14 07:25:16] 2025-10-14 11:24:36,157 | INFO     | 
[2025-10-14 07:25:16] 2025-10-14 11:24:36,157 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-14 07:25:16] 2025-10-14 11:24:36,168 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 07:25:16] 2025-10-14 11:24:36,168 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 07:25:16] 2025-10-14 11:24:36,168 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 07:25:16] 2025-10-14 11:24:36,168 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 07:25:16] 2025-10-14 11:24:36,168 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 07:25:16] 2025-10-14 11:24:36,168 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 07:25:16] 2025-10-14 11:24:36,168 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 07:25:16] 2025-10-14 11:24:36,169 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 07:25:16] 2025-10-14 11:24:36,169 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 07:25:16] 2025-10-14 11:24:36,169 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 07:25:16] 2025-10-14 11:24:36,169 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 07:25:16] 2025-10-14 11:24:36,169 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 07:25:16] 2025-10-14 11:24:36,169 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 07:25:16] 2025-10-14 11:24:36,169 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 07:25:16] 2025-10-14 11:24:36,169 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 07:25:16] 2025-10-14 11:24:36,169 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 07:25:16] 2025-10-14 11:24:36,169 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 07:25:16] 2025-10-14 11:24:36,169 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 07:25:16] 2025-10-14 11:24:36,169 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 07:25:16] 2025-10-14 11:24:36,169 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 07:25:16] 2025-10-14 11:24:36,169 | INFO     | job 6844098084 has completed (purged errors)
[2025-10-14 07:25:16] 2025-10-14 11:24:36,169 | INFO     | overall cleanup function is called
[2025-10-14 07:25:16] 2025-10-14 11:24:37,176 | INFO     | --- collectZombieJob: --- 10, [2723027]
[2025-10-14 07:25:16] 2025-10-14 11:24:37,176 | INFO     | zombie collector waiting for pid 2723027
[2025-10-14 07:25:16] 2025-10-14 11:24:37,207 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 07:25:16] 2025-10-14 11:24:37,207 | INFO     | collected zombie processes
[2025-10-14 07:25:16] 2025-10-14 11:24:37,207 | INFO     | will attempt to kill all subprocesses of pid=2723027
[2025-10-14 07:25:16] 2025-10-14 11:24:37,377 | INFO     | process IDs to be killed: [2723027] (in reverse order)
[2025-10-14 07:25:16] 2025-10-14 11:24:37,438 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 07:25:16] 2025-10-14 11:24:37,438 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 07:25:16] 2025-10-14 11:24:37,443 | INFO     | did not find any defunct processes belonging to 2723027
[2025-10-14 07:25:16] 2025-10-14 11:24:37,447 | INFO     | did not find any defunct processes belonging to 2723027
[2025-10-14 07:25:16] 2025-10-14 11:24:37,447 | INFO     | ready for new job
[2025-10-14 07:25:16] 2025-10-14 11:24:37,447 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 07:25:16] 2025-10-14 11:24:37,448 | INFO     | ***************************************
[2025-10-14 07:25:16] 2025-10-14 11:24:37,448 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 07:25:16] 2025-10-14 11:24:37,448 | INFO     | ***************************************
[2025-10-14 07:25:16] 2025-10-14 11:24:37,448 | INFO     | 
[2025-10-14 07:25:16] 2025-10-14 11:24:37,461 | INFO     | architecture information:
[2025-10-14 07:25:16] 2025-10-14 11:24:37,462 | INFO     | executing command: cat /etc/os-release
[2025-10-14 07:25:16] 2025-10-14 11:24:37,469 | INFO     | cat /etc/os-release:
[2025-10-14 07:25:16] NAME="CentOS Linux"
[2025-10-14 07:25:16] VERSION="7 (Core)"
[2025-10-14 07:25:16] ID="centos"
[2025-10-14 07:25:16] ID_LIKE="rhel fedora"
[2025-10-14 07:25:16] VERSION_ID="7"
[2025-10-14 07:25:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 07:25:16] ANSI_COLOR="0;31"
[2025-10-14 07:25:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 07:25:16] HOME_URL="https://www.centos.org/"
[2025-10-14 07:25:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 07:25:16] 
[2025-10-14 07:25:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 07:25:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 07:25:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 07:25:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 07:25:16] 
[2025-10-14 07:25:16] 2025-10-14 11:24:37,469 | INFO     | ***************************************
[2025-10-14 07:25:16] 2025-10-14 11:24:37,972 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-14 07:25:16] 2025-10-14 11:24:37,981 | INFO     | sufficient remaining disk space (62824382464 B)
[2025-10-14 07:25:16] 2025-10-14 11:24:37,981 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 07:25:16] 2025-10-14 11:24:37,981 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 07:25:16] 2025-10-14 11:24:37,981 | INFO     | update_server=False
[2025-10-14 07:25:16] 2025-10-14 11:24:37,981 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 07:25:16] 2025-10-14 11:24:37,982 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 07:25:16] 2025-10-14 11:24:37,982 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 07:25:16] 2025-10-14 11:24:37,982 | INFO     | aborting loop
[2025-10-14 07:25:16] 2025-10-14 11:24:38,409 | INFO     | all payload control threads have been joined
[2025-10-14 07:25:16] 2025-10-14 11:24:38,667 | INFO     | all data control threads have been joined
[2025-10-14 07:25:16] 2025-10-14 11:24:38,987 | INFO     | [job] retrieve thread has finished
[2025-10-14 07:25:16] 2025-10-14 11:24:38,987 | INFO     | [job] queue monitor thread has finished
[2025-10-14 07:25:16] 2025-10-14 11:24:38,987 | INFO     | [job] job monitor thread has finished
[2025-10-14 07:25:16] 2025-10-14 11:24:39,037 | INFO     | all job control threads have been joined
[2025-10-14 07:25:16] 2025-10-14 11:24:39,091 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 07:25:16] 2025-10-14 11:24:39,182 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 07:25:16] 2025-10-14 11:24:39,212 | INFO     | [job] validate thread has finished
[2025-10-14 07:25:16] 2025-10-14 11:24:39,231 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 07:25:16] 2025-10-14 11:24:39,351 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 07:25:16] 2025-10-14 11:24:39,413 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 07:25:16] 2025-10-14 11:24:39,414 | INFO     | [payload] control thread has finished
[2025-10-14 07:25:16] 2025-10-14 11:24:39,657 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 07:25:16] 2025-10-14 11:24:39,673 | INFO     | [data] control thread has finished
[2025-10-14 07:25:16] 2025-10-14 11:24:39,679 | INFO     | [payload] failed_post thread has finished
[2025-10-14 07:25:16] 2025-10-14 11:24:39,685 | INFO     | [payload] validate_post thread has finished
[2025-10-14 07:25:16] 2025-10-14 11:24:40,041 | INFO     | [job] control thread has finished
[2025-10-14 07:25:16] 2025-10-14 11:24:40,457 | INFO     | [data] copytool_in thread has finished
[2025-10-14 07:25:16] 2025-10-14 11:24:41,096 | INFO     | [data] copytool_out thread has finished
[2025-10-14 07:25:16] 2025-10-14 11:24:43,663 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 07:25:16] 2025-10-14 11:25:07,630 | INFO     | PID=2698677 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 07:25:16] 2025-10-14 11:25:07,631 | INFO     | .. there are 5 such processes running
[2025-10-14 07:25:16] 2025-10-14 11:25:07,631 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 07:25:16] 2025-10-14 11:25:07,631 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 07:25:16] 2025-10-14 11:25:07,631 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 07:25:16] 2025-10-14 11:25:10,876 | INFO     | [monitor] cgroup control has ended
[2025-10-14 07:25:16] 2025-10-14 11:25:11,001 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140255235639104)>', '<ExcThread(monitor, started 140254740723456)>']
[2025-10-14 07:25:16] 2025-10-14 11:25:11,649 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 07:25:16] 2025-10-14 11:25:11,649 | INFO     | [monitor] control thread has ended
[2025-10-14 07:25:16] 2025-10-14 11:25:16,027 | INFO     | all workflow threads have been joined
[2025-10-14 07:25:16] 2025-10-14 11:25:16,027 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 07:25:16] 2025-10-14 11:25:16,027 | INFO     | traces error code: 0
[2025-10-14 07:25:16] 2025-10-14 11:25:16,027 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 07:25:16] 2025-10-14 11:25:16,091 [wrapper] ==== pilot stdout END ====
[2025-10-14 07:25:16] 2025-10-14 11:25:16,093 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 07:25:16] 2025-10-14 11:25:16,094 [wrapper] pilotpid: 2698677
[2025-10-14 07:25:16] 2025-10-14 11:25:16,096 [wrapper] Pilot exit status: 0
[2025-10-14 07:25:16] 2025-10-14 11:25:16,102 [wrapper] pandaids: 6844098084
[2025-10-14 07:25:16] 2025-10-14 11:25:16,132 [wrapper] cleanup supervisor_pilot 2898590 2698678
[2025-10-14 07:25:16] 2025-10-14 11:25:16,134 [wrapper] Test setup, not cleaning
[2025-10-14 07:25:16] 2025-10-14 11:25:16,135 [wrapper] apfmon messages muted
[2025-10-14 07:25:16] 2025-10-14 11:25:16,137 [wrapper] ==== wrapper stdout END ====
[2025-10-14 07:25:16] 2025-10-14 11:25:16,138 [wrapper] ==== wrapper stderr END ====
[2025-10-14 07:25:16]  *** Error codes and diagnostics ***
[2025-10-14 07:25:16]     "exeErrorCode": 0,
[2025-10-14 07:25:16]     "exeErrorDiag": "",
[2025-10-14 07:25:16]     "pilotErrorCode": 0,
[2025-10-14 07:25:16]     "pilotErrorDiag": "",
[2025-10-14 07:25:16]  *** Listing of results directory ***
[2025-10-14 07:25:16] total 410436
[2025-10-14 07:25:16] -rwx------. 1 boincer umatlas     36292 Oct 14 06:02 runpilot2-wrapper.sh
[2025-10-14 07:25:16] -rw-r--r--. 1 boincer umatlas      5112 Oct 14 06:03 queuedata.json
[2025-10-14 07:25:16] -rw-r--r--. 1 boincer umatlas    557409 Oct 14 06:03 pilot3.tar.gz
[2025-10-14 07:25:16] -rw-r--r--. 1 boincer umatlas       100 Oct 14 06:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 07:25:16] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 14 06:03 run_atlas
[2025-10-14 07:25:16] -rw-r--r--. 1 boincer umatlas       105 Oct 14 06:03 job.xml
[2025-10-14 07:25:16] -rw-r--r--. 2 boincer umatlas 218831040 Oct 14 06:03 EVNT.46676267._004450.pool.root.1
[2025-10-14 07:25:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 06:03 start_atlas.sh
[2025-10-14 07:25:16] drwxrwx--x. 2 boincer umatlas      4096 Oct 14 06:03 shared
[2025-10-14 07:25:16] -rw-r--r--. 2 boincer umatlas    569683 Oct 14 06:03 input.tar.gz
[2025-10-14 07:25:16] -rw-r--r--. 1 boincer umatlas         0 Oct 14 06:03 boinc_lockfile
[2025-10-14 07:25:16] -rw-r--r--. 1 boincer umatlas      2550 Oct 14 06:03 pandaJob.out
[2025-10-14 07:25:16] -rw-------. 1 boincer umatlas    972837 Oct 14 06:04 agis_schedconf.cvmfs.json
[2025-10-14 07:25:16] -rw-------. 1 boincer umatlas   1560580 Oct 14 06:04 agis_ddmendpoints.agis.ALL.json
[2025-10-14 07:25:16] drwx------. 5 boincer umatlas      4096 Oct 14 06:04 pilot3
[2025-10-14 07:25:16] -rw-r--r--. 1 boincer umatlas      6614 Oct 14 07:22 init_data.xml
[2025-10-14 07:25:16] -rw-------. 1 boincer umatlas 195474056 Oct 14 07:24 HITS.46676269._097164.pool.root.1
[2025-10-14 07:25:16] -rw-r--r--. 1 boincer umatlas       529 Oct 14 07:24 boinc_task_state.xml
[2025-10-14 07:25:16] -rw-------. 1 boincer umatlas      1028 Oct 14 07:24 memory_monitor_summary.json
[2025-10-14 07:25:16] -rw-------. 1 boincer umatlas    332127 Oct 14 07:24 log.46676269._097164.job.log.tgz.1
[2025-10-14 07:25:16] -rw-------. 1 boincer umatlas      7807 Oct 14 07:24 heartbeat.json
[2025-10-14 07:25:16] -rw-------. 1 boincer umatlas        95 Oct 14 07:25 pilot_heartbeat.json
[2025-10-14 07:25:16] -rw-r--r--. 1 boincer umatlas      8192 Oct 14 07:25 boinc_mmap_file
[2025-10-14 07:25:16] -rw-r--r--. 1 boincer umatlas        27 Oct 14 07:25 wrapper_checkpoint.txt
[2025-10-14 07:25:16] -rw-------. 1 boincer umatlas      4823 Oct 14 07:25 pilotlog.txt
[2025-10-14 07:25:16] -rw-------. 1 boincer umatlas    708516 Oct 14 07:25 log.46676269._097164.job.log.1
[2025-10-14 07:25:16] -rw-------. 1 boincer umatlas       357 Oct 14 07:25 output.list
[2025-10-14 07:25:16] -rw-r--r--. 1 boincer umatlas       620 Oct 14 07:25 runtime_log
[2025-10-14 07:25:16] -rw-------. 1 boincer umatlas   1054720 Oct 14 07:25 result.tar.gz
[2025-10-14 07:25:16] -rw-------. 1 boincer umatlas       649 Oct 14 07:25 uWgLDm52qS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7qmNDmacbYxn.diag
[2025-10-14 07:25:16] -rw-r--r--. 1 boincer umatlas      8698 Oct 14 07:25 runtime_log.err
[2025-10-14 07:25:16] -rw-r--r--. 1 boincer umatlas     21605 Oct 14 07:25 stderr.txt
[2025-10-14 07:25:16] HITS file was successfully produced:
[2025-10-14 07:25:16] -rw-------. 1 boincer umatlas 195474056 Oct 14 07:24 shared/HITS.pool.root.1
[2025-10-14 07:25:16]  *** Contents of shared directory: ***
[2025-10-14 07:25:16] total 406216
[2025-10-14 07:25:16] -rw-r--r--. 2 boincer umatlas 218831040 Oct 14 06:03 ATLAS.root_0
[2025-10-14 07:25:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 06:03 start_atlas.sh
[2025-10-14 07:25:16] -rw-r--r--. 2 boincer umatlas    569683 Oct 14 06:03 input.tar.gz
[2025-10-14 07:25:16] -rw-------. 1 boincer umatlas 195474056 Oct 14 07:24 HITS.pool.root.1
[2025-10-14 07:25:16] -rw-------. 1 boincer umatlas   1054720 Oct 14 07:25 result.tar.gz
07:25:17 (2692619): run_atlas exited; CPU time 36539.020891
07:25:17 (2692619): called boinc_finish(0)

</stderr_txt>
]]>

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