Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:01:03 (4137360): wrapper (7.7.26015): starting
06:01:03 (4137360): wrapper: running run_atlas (--nthreads 8)
[2025-10-14 06:01:03] Arguments: --nthreads 8
[2025-10-14 06:01:03] Threads: 8
[2025-10-14 06:01:03] Checking for CVMFS
[2025-10-14 06:01:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 06:01:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 06:01:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 06:01:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 06:01:07] 2.13.2.0 3290912 8135 204496 151692 0 284 34667196 40960001 13517 16776704 0 16721983 99.727 10879485 32492 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-14 06:01:07] CVMFS is ok
[2025-10-14 06:01:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 06:01:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 06:01:07] Further information can be found at the LHC@home message board.
[2025-10-14 06:01:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 06:01:07] Checking for apptainer binary...
[2025-10-14 06:01:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 06:01:07] Running /usr/bin/apptainer --version
[2025-10-14 06:01:07] apptainer version 1.4.3-1.el9
[2025-10-14 06:01:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 06:01:07] c-210-31-3.aglt2.org
[2025-10-14 06:01:07] apptainer works
[2025-10-14 06:01:07] Set ATHENA_PROC_NUMBER=8
[2025-10-14 06:01:07] Set ATHENA_CORE_NUMBER=8
[2025-10-14 06:01:08] Starting ATLAS job with PandaID=6840429216
[2025-10-14 06:01:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 07:31:13]  *** The last 200 lines of the pilot log: ***
[2025-10-14 07:31:14]  status=None
[2025-10-14 07:31:14]  status_code=0
[2025-10-14 07:31:14]  storage_token=
[2025-10-14 07:31:14]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6840429216/log.46676269._084562.job.log.tgz.1
[2025-10-14 07:31:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/6e/log.46676269._084562.job.log.tgz.1
[2025-10-14 07:31:14]  workdir=None
[2025-10-14 07:31:14] ]
[2025-10-14 07:31:14] 2025-10-14 11:30:04,042 | INFO     | transferring file log.46676269._084562.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6840429216/log.46676269._084562.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-14 07:31:14] 2025-10-14 11:30:04,043 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6840429216/log.46676269._084562.job.log.tgz.1 /tmp/boinchome/slots/1/log.46676269._084562.job
[2025-10-14 07:31:14] 2025-10-14 11:30:04,066 | INFO     | adding to output.list: log.46676269._084562.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/6e/log.46676269._084562.job.log.tg
[2025-10-14 07:31:14] 2025-10-14 11:30:04,067 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-14 07:31:14] 2025-10-14 11:30:04,068 | INFO     | summary of transferred files:
[2025-10-14 07:31:14] 2025-10-14 11:30:04,068 | INFO     |  -- lfn=log.46676269._084562.job.log.tgz.1, status_code=0, status=transferred
[2025-10-14 07:31:14] 2025-10-14 11:30:04,068 | INFO     | stage-out finished correctly
[2025-10-14 07:31:14] 2025-10-14 11:30:04,182 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-14 07:31:14] 2025-10-14 11:30:04,438 | INFO     | time since job start (5285s) is within the limit (172800.0s)
[2025-10-14 07:31:14] 2025-10-14 11:30:05,409 | INFO     | job 6840429216 has state=finished
[2025-10-14 07:31:14] 2025-10-14 11:30:05,409 | INFO     | preparing for final server update for job 6840429216 in state='finished'
[2025-10-14 07:31:14] 2025-10-14 11:30:05,472 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-14 07:31:14] 2025-10-14 11:30:05,473 | INFO     | this job has now completed (state=finished)
[2025-10-14 07:31:14] 2025-10-14 11:30:05,473 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-14 07:31:14] 2025-10-14 11:30:05,473 | INFO     | log transfer has been attempted: DONE
[2025-10-14 07:31:14] 2025-10-14 11:30:05,473 | INFO     | job 6840429216 has finished - writing final server update
[2025-10-14 07:31:14] 2025-10-14 11:30:05,474 | INFO     | total number of processed events: 400 (read)
[2025-10-14 07:31:14] 2025-10-14 11:30:05,475 | INFO     | executing command: lscpu
[2025-10-14 07:31:14] 2025-10-14 11:30:05,516 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-14 07:31:14] 2025-10-14 11:30:06,443 | INFO     | time since job start (5287s) is within the limit (172800.0s)
[2025-10-14 07:31:14] 2025-10-14 11:30:08,348 | WARNING  | process 4148942 can no longer be monitored (due to stat problems) - aborting
[2025-10-14 07:31:14] 2025-10-14 11:30:08,349 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840429216/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 07:31:14] 2025-10-14 11:30:08,351 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840429216/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 07:31:14] 2025-10-14 11:30:08,351 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-14 07:31:14] 2025-10-14 11:30:08,352 | WARNING  | maxPSS not found in memory monitor output
[2025-10-14 07:31:14] 2025-10-14 11:30:08,449 | INFO     | time since job start (5289s) is within the limit (172800.0s)
[2025-10-14 07:31:14] 2025-10-14 11:30:08,650 | INFO     | number of running child processes to parent process 4148942: 1
[2025-10-14 07:31:14] 2025-10-14 11:30:08,651 | INFO     | maximum number of monitored processes: 6
[2025-10-14 07:31:14] 2025-10-14 11:30:09,723 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-14 07:31:14] 2025-10-14 11:30:09,728 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2742.6226607142858
[2025-10-14 07:31:14] 2025-10-14 11:30:09,741 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840429216/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 07:31:14] 2025-10-14 11:30:09,742 | INFO     | extracted standard info from prmon json
[2025-10-14 07:31:14] 2025-10-14 11:30:09,742 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 07:31:14] 2025-10-14 11:30:09,742 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 07:31:14] 2025-10-14 11:30:09,743 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 07:31:14] 2025-10-14 11:30:09,743 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 07:31:14] 2025-10-14 11:30:09,746 | INFO     | fitting pss+swap vs Time
[2025-10-14 07:31:14] 2025-10-14 11:30:09,746 | INFO     | sum of square deviations: 147117331.44871774
[2025-10-14 07:31:14] 2025-10-14 11:30:09,747 | INFO     | sum of deviations: 1175537632.1794872
[2025-10-14 07:31:14] 2025-10-14 11:30:09,747 | INFO     | mean x: 1760438869.525641
[2025-10-14 07:31:14] 2025-10-14 11:30:09,747 | INFO     | mean y: 2556866.4102564105
[2025-10-14 07:31:14] 2025-10-14 11:30:09,747 | INFO     | -- intersect: -14064189178.397385
[2025-10-14 07:31:14] 2025-10-14 11:30:09,747 | INFO     | intersect: -14064189178.397385
[2025-10-14 07:31:14] 2025-10-14 11:30:09,748 | INFO     | chi2: 0.004064716228693681
[2025-10-14 07:31:14] 2025-10-14 11:30:09,748 | INFO     | -- intersect: -14064189178.397385
[2025-10-14 07:31:14] 2025-10-14 11:30:09,748 | INFO     | current memory leak: 7.99 B/s (using 78 data points, chi2=0.00)
[2025-10-14 07:31:14] 2025-10-14 11:30:09,748 | INFO     | could have reported an average CPU frequency of 2702 MHz (6 samples)
[2025-10-14 07:31:14] 2025-10-14 11:30:09,749 | INFO     | ..............................
[2025-10-14 07:31:14] 2025-10-14 11:30:09,749 | INFO     | . Timing measurements:
[2025-10-14 07:31:14] 2025-10-14 11:30:09,749 | INFO     | . get job = 0 s
[2025-10-14 07:31:14] 2025-10-14 11:30:09,749 | INFO     | . initial setup = 3 s
[2025-10-14 07:31:14] 2025-10-14 11:30:09,749 | INFO     | . payload setup = 33 s
[2025-10-14 07:31:14] 2025-10-14 11:30:09,749 | INFO     | . stage-in = 0 s
[2025-10-14 07:31:14] 2025-10-14 11:30:09,749 | INFO     | . payload execution = 5208 s
[2025-10-14 07:31:14] 2025-10-14 11:30:09,749 | INFO     | . stage-out = 1 s
[2025-10-14 07:31:14] 2025-10-14 11:30:09,749 | INFO     | . log creation = 0 s
[2025-10-14 07:31:14] 2025-10-14 11:30:09,749 | INFO     | ..............................
[2025-10-14 07:31:14] 2025-10-14 11:30:09,843 | INFO     | 
[2025-10-14 07:31:14] 2025-10-14 11:30:09,844 | INFO     | job summary report
[2025-10-14 07:31:14] 2025-10-14 11:30:09,844 | INFO     | --------------------------------------------------
[2025-10-14 07:31:14] 2025-10-14 11:30:09,844 | INFO     | PanDA job id: 6840429216
[2025-10-14 07:31:14] 2025-10-14 11:30:09,844 | INFO     | task id: 46676269
[2025-10-14 07:31:14] 2025-10-14 11:30:09,844 | INFO     | errors: (none)
[2025-10-14 07:31:14] 2025-10-14 11:30:09,844 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 07:31:14] 2025-10-14 11:30:09,844 | INFO     | pilot state: finished 
[2025-10-14 07:31:14] 2025-10-14 11:30:09,844 | INFO     | transexitcode: 0
[2025-10-14 07:31:14] 2025-10-14 11:30:09,844 | INFO     | exeerrorcode: 0
[2025-10-14 07:31:14] 2025-10-14 11:30:09,844 | INFO     | exeerrordiag: 
[2025-10-14 07:31:14] 2025-10-14 11:30:09,844 | INFO     | exitcode: 0
[2025-10-14 07:31:14] 2025-10-14 11:30:09,844 | INFO     | exitmsg: OK
[2025-10-14 07:31:14] 2025-10-14 11:30:09,844 | INFO     | cpuconsumptiontime: 35935 s
[2025-10-14 07:31:14] 2025-10-14 11:30:09,845 | INFO     | nevents: 400
[2025-10-14 07:31:14] 2025-10-14 11:30:09,845 | INFO     | neventsw: 0
[2025-10-14 07:31:14] 2025-10-14 11:30:09,845 | INFO     | pid: 4148942
[2025-10-14 07:31:14] 2025-10-14 11:30:09,845 | INFO     | pgrp: 4148942
[2025-10-14 07:31:14] 2025-10-14 11:30:09,845 | INFO     | corecount: 8
[2025-10-14 07:31:14] 2025-10-14 11:30:09,845 | INFO     | event service: False
[2025-10-14 07:31:14] 2025-10-14 11:30:09,845 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348885, 13: 2348913, 20: 2349231, 23: 2349259, 5246: 2375811, 5247: 2384865, 5253: 2385003}
[2025-10-14 07:31:14] 2025-10-14 11:30:09,845 | INFO     | --------------------------------------------------
[2025-10-14 07:31:14] 2025-10-14 11:30:09,845 | INFO     | 
[2025-10-14 07:31:14] 2025-10-14 11:30:09,845 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-14 07:31:14] 2025-10-14 11:30:09,866 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 07:31:14] 2025-10-14 11:30:09,867 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 07:31:14] 2025-10-14 11:30:09,867 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 07:31:14] 2025-10-14 11:30:09,867 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 07:31:14] 2025-10-14 11:30:09,867 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 07:31:14] 2025-10-14 11:30:09,867 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 07:31:14] 2025-10-14 11:30:09,867 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 07:31:14] 2025-10-14 11:30:09,867 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 07:31:14] 2025-10-14 11:30:09,867 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 07:31:14] 2025-10-14 11:30:09,867 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 07:31:14] 2025-10-14 11:30:09,867 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 07:31:14] 2025-10-14 11:30:09,867 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 07:31:14] 2025-10-14 11:30:09,867 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 07:31:14] 2025-10-14 11:30:09,868 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 07:31:14] 2025-10-14 11:30:09,868 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 07:31:14] 2025-10-14 11:30:09,868 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 07:31:14] 2025-10-14 11:30:09,868 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 07:31:14] 2025-10-14 11:30:09,868 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 07:31:14] 2025-10-14 11:30:09,868 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 07:31:14] 2025-10-14 11:30:09,868 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 07:31:14] 2025-10-14 11:30:09,868 | INFO     | job 6840429216 has completed (purged errors)
[2025-10-14 07:31:14] 2025-10-14 11:30:09,868 | INFO     | overall cleanup function is called
[2025-10-14 07:31:14] 2025-10-14 11:30:10,876 | INFO     | --- collectZombieJob: --- 10, [4148942]
[2025-10-14 07:31:14] 2025-10-14 11:30:10,876 | INFO     | zombie collector waiting for pid 4148942
[2025-10-14 07:31:14] 2025-10-14 11:30:10,876 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 07:31:14] 2025-10-14 11:30:10,877 | INFO     | collected zombie processes
[2025-10-14 07:31:14] 2025-10-14 11:30:10,877 | INFO     | will attempt to kill all subprocesses of pid=4148942
[2025-10-14 07:31:14] 2025-10-14 11:30:11,170 | INFO     | process IDs to be killed: [4148942] (in reverse order)
[2025-10-14 07:31:14] 2025-10-14 11:30:11,277 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 07:31:14] 2025-10-14 11:30:11,278 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 07:31:14] 2025-10-14 11:30:11,290 | INFO     | did not find any defunct processes belonging to 4148942
[2025-10-14 07:31:14] 2025-10-14 11:30:11,301 | INFO     | did not find any defunct processes belonging to 4148942
[2025-10-14 07:31:14] 2025-10-14 11:30:11,302 | INFO     | ready for new job
[2025-10-14 07:31:14] 2025-10-14 11:30:11,302 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 07:31:14] 2025-10-14 11:30:11,304 | INFO     | ***************************************
[2025-10-14 07:31:14] 2025-10-14 11:30:11,304 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 07:31:14] 2025-10-14 11:30:11,304 | INFO     | ***************************************
[2025-10-14 07:31:14] 2025-10-14 11:30:11,304 | INFO     | 
[2025-10-14 07:31:14] 2025-10-14 11:30:11,308 | INFO     | architecture information:
[2025-10-14 07:31:14] 2025-10-14 11:30:11,308 | INFO     | executing command: cat /etc/os-release
[2025-10-14 07:31:14] 2025-10-14 11:30:11,327 | INFO     | cat /etc/os-release:
[2025-10-14 07:31:14] NAME="CentOS Linux"
[2025-10-14 07:31:14] VERSION="7 (Core)"
[2025-10-14 07:31:14] ID="centos"
[2025-10-14 07:31:14] ID_LIKE="rhel fedora"
[2025-10-14 07:31:14] VERSION_ID="7"
[2025-10-14 07:31:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 07:31:14] ANSI_COLOR="0;31"
[2025-10-14 07:31:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 07:31:14] HOME_URL="https://www.centos.org/"
[2025-10-14 07:31:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 07:31:14] 
[2025-10-14 07:31:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 07:31:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 07:31:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 07:31:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 07:31:14] 
[2025-10-14 07:31:14] 2025-10-14 11:30:11,327 | INFO     | ***************************************
[2025-10-14 07:31:14] 2025-10-14 11:30:11,830 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-14 07:31:14] 2025-10-14 11:30:11,847 | INFO     | sufficient remaining disk space (75522637824 B)
[2025-10-14 07:31:14] 2025-10-14 11:30:11,847 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 07:31:14] 2025-10-14 11:30:11,847 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 07:31:14] 2025-10-14 11:30:11,848 | INFO     | update_server=False
[2025-10-14 07:31:14] 2025-10-14 11:30:11,848 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 07:31:14] 2025-10-14 11:30:12,160 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 07:31:14] 2025-10-14 11:30:12,160 | INFO     | aborting loop
[2025-10-14 07:31:14] 2025-10-14 11:30:12,194 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 07:31:14] 2025-10-14 11:30:12,514 | INFO     | all data control threads have been joined
[2025-10-14 07:31:14] 2025-10-14 11:30:12,620 | INFO     | all job control threads have been joined
[2025-10-14 07:31:14] 2025-10-14 11:30:12,820 | INFO     | all payload control threads have been joined
[2025-10-14 07:31:14] 2025-10-14 11:30:12,853 | INFO     | [job] retrieve thread has finished
[2025-10-14 07:31:14] 2025-10-14 11:30:12,889 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 07:31:14] 2025-10-14 11:30:13,074 | INFO     | [data] copytool_in thread has finished
[2025-10-14 07:31:14] 2025-10-14 11:30:13,165 | INFO     | [job] job monitor thread has finished
[2025-10-14 07:31:14] 2025-10-14 11:30:13,505 | INFO     | [payload] validate_post thread has finished
[2025-10-14 07:31:14] 2025-10-14 11:30:13,519 | INFO     | [data] control thread has finished
[2025-10-14 07:31:14] 2025-10-14 11:30:13,576 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 07:31:14] 2025-10-14 11:30:13,625 | INFO     | [job] control thread has finished
[2025-10-14 07:31:14] 2025-10-14 11:30:13,825 | INFO     | [payload] control thread has finished
[2025-10-14 07:31:14] 2025-10-14 11:30:13,909 | INFO     | [payload] failed_post thread has finished
[2025-10-14 07:31:14] 2025-10-14 11:30:14,199 | INFO     | [data] copytool_out thread has finished
[2025-10-14 07:31:14] 2025-10-14 11:30:14,246 | INFO     | [job] validate thread has finished
[2025-10-14 07:31:14] 2025-10-14 11:30:14,355 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 07:31:14] 2025-10-14 11:30:14,817 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 07:31:14] 2025-10-14 11:30:14,849 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 07:31:14] 2025-10-14 11:30:15,854 | INFO     | [job] queue monitor thread has finished
[2025-10-14 07:31:14] 2025-10-14 11:30:18,823 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 07:31:14] 2025-10-14 11:30:22,758 | INFO     | job.realtimelogging is not enabled
[2025-10-14 07:31:14] 2025-10-14 11:30:23,763 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 07:31:14] 2025-10-14 11:30:41,843 | INFO     | PID=4141459 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 07:31:14] 2025-10-14 11:30:41,843 | INFO     | .. there are 13 such processes running
[2025-10-14 07:31:14] 2025-10-14 11:30:41,845 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 07:31:14] 2025-10-14 11:30:41,846 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 07:31:14] 2025-10-14 11:30:41,846 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 07:31:14] 2025-10-14 11:31:08,063 | INFO     | [monitor] cgroup control has ended
[2025-10-14 07:31:14] 2025-10-14 11:31:08,590 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140435401246528)>', '<ExcThread(monitor, started 140435053848320)>']
[2025-10-14 07:31:14] 2025-10-14 11:31:08,973 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 07:31:14] 2025-10-14 11:31:08,973 | INFO     | [monitor] control thread has ended
[2025-10-14 07:31:14] 2025-10-14 11:31:13,615 | INFO     | all workflow threads have been joined
[2025-10-14 07:31:14] 2025-10-14 11:31:13,615 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 07:31:14] 2025-10-14 11:31:13,615 | INFO     | traces error code: 0
[2025-10-14 07:31:14] 2025-10-14 11:31:13,616 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 07:31:14] 2025-10-14 11:31:13,815 [wrapper] ==== pilot stdout END ====
[2025-10-14 07:31:14] 2025-10-14 11:31:13,819 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 07:31:14] 2025-10-14 11:31:13,822 [wrapper] pilotpid: 4141459
[2025-10-14 07:31:14] 2025-10-14 11:31:13,825 [wrapper] Pilot exit status: 0
[2025-10-14 07:31:14] 2025-10-14 11:31:13,839 [wrapper] pandaids: 6840429216
[2025-10-14 07:31:14] 2025-10-14 11:31:13,922 [wrapper] cleanup supervisor_pilot  130442 4141460
[2025-10-14 07:31:14] 2025-10-14 11:31:13,926 [wrapper] Test setup, not cleaning
[2025-10-14 07:31:14] 2025-10-14 11:31:13,930 [wrapper] apfmon messages muted
[2025-10-14 07:31:14] 2025-10-14 11:31:13,934 [wrapper] ==== wrapper stdout END ====
[2025-10-14 07:31:14] 2025-10-14 11:31:13,937 [wrapper] ==== wrapper stderr END ====
[2025-10-14 07:31:14]  *** Error codes and diagnostics ***
[2025-10-14 07:31:14]     "exeErrorCode": 0,
[2025-10-14 07:31:14]     "exeErrorDiag": "",
[2025-10-14 07:31:14]     "pilotErrorCode": 0,
[2025-10-14 07:31:14]     "pilotErrorDiag": "",
[2025-10-14 07:31:14]  *** Listing of results directory ***
[2025-10-14 07:31:14] total 403608
[2025-10-14 07:31:14] -rwx------. 1 boincer umatlas     36292 Oct 12 13:17 runpilot2-wrapper.sh
[2025-10-14 07:31:14] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 13:17 queuedata.json
[2025-10-14 07:31:14] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 13:17 pilot3.tar.gz
[2025-10-14 07:31:14] -rw-r--r--. 1 boincer umatlas       100 Oct 14 06:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 07:31:14] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 14 06:01 run_atlas
[2025-10-14 07:31:14] -rw-r--r--. 1 boincer umatlas       105 Oct 14 06:01 job.xml
[2025-10-14 07:31:14] -rw-r--r--. 2 boincer umatlas 220917058 Oct 14 06:01 EVNT.46676267._004807.pool.root.1
[2025-10-14 07:31:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 06:01 start_atlas.sh
[2025-10-14 07:31:14] drwxrwx--x. 2 boincer umatlas      4096 Oct 14 06:01 shared
[2025-10-14 07:31:14] -rw-r--r--. 2 boincer umatlas    569672 Oct 14 06:01 input.tar.gz
[2025-10-14 07:31:14] -rw-r--r--. 1 boincer umatlas         0 Oct 14 06:01 boinc_lockfile
[2025-10-14 07:31:14] -rw-r--r--. 1 boincer umatlas      2550 Oct 14 06:01 pandaJob.out
[2025-10-14 07:31:14] -rw-------. 1 boincer umatlas    972837 Oct 14 06:01 agis_schedconf.cvmfs.json
[2025-10-14 07:31:14] -rw-------. 1 boincer umatlas   1560580 Oct 14 06:01 agis_ddmendpoints.agis.ALL.json
[2025-10-14 07:31:14] drwx------. 5 boincer umatlas      4096 Oct 14 06:01 pilot3
[2025-10-14 07:31:14] -rw-------. 1 boincer umatlas 186260812 Oct 14 07:29 HITS.46676269._084562.pool.root.1
[2025-10-14 07:31:14] -rw-r--r--. 1 boincer umatlas       529 Oct 14 07:29 boinc_task_state.xml
[2025-10-14 07:31:14] -rw-------. 1 boincer umatlas      1042 Oct 14 07:29 memory_monitor_summary.json
[2025-10-14 07:31:14] -rw-------. 1 boincer umatlas    339803 Oct 14 07:30 log.46676269._084562.job.log.tgz.1
[2025-10-14 07:31:14] -rw-------. 1 boincer umatlas      7827 Oct 14 07:30 heartbeat.json
[2025-10-14 07:31:14] -rw-------. 1 boincer umatlas        95 Oct 14 07:30 pilot_heartbeat.json
[2025-10-14 07:31:14] -rw-r--r--. 1 boincer umatlas      6842 Oct 14 07:30 init_data.xml
[2025-10-14 07:31:14] -rw-r--r--. 1 boincer umatlas      8192 Oct 14 07:30 boinc_mmap_file
[2025-10-14 07:31:14] -rw-r--r--. 1 boincer umatlas        27 Oct 14 07:30 wrapper_checkpoint.txt
[2025-10-14 07:31:14] -rw-------. 1 boincer umatlas      4896 Oct 14 07:31 pilotlog.txt
[2025-10-14 07:31:14] -rw-------. 1 boincer umatlas    772248 Oct 14 07:31 log.46676269._084562.job.log.1
[2025-10-14 07:31:14] -rw-------. 1 boincer umatlas       357 Oct 14 07:31 output.list
[2025-10-14 07:31:14] -rw-r--r--. 1 boincer umatlas       620 Oct 14 07:31 runtime_log
[2025-10-14 07:31:14] -rw-------. 1 boincer umatlas   1126400 Oct 14 07:31 result.tar.gz
[2025-10-14 07:31:14] -rw-r--r--. 1 boincer umatlas      8713 Oct 14 07:31 runtime_log.err
[2025-10-14 07:31:14] -rw-------. 1 boincer umatlas       654 Oct 14 07:31 qD6LDmLsES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRqkNDmBFA3Oo.diag
[2025-10-14 07:31:14] -rw-r--r--. 1 boincer umatlas     22075 Oct 14 07:31 stderr.txt
[2025-10-14 07:31:14] HITS file was successfully produced:
[2025-10-14 07:31:14] -rw-------. 1 boincer umatlas 186260812 Oct 14 07:29 shared/HITS.pool.root.1
[2025-10-14 07:31:14]  *** Contents of shared directory: ***
[2025-10-14 07:31:14] total 399320
[2025-10-14 07:31:14] -rw-r--r--. 2 boincer umatlas 220917058 Oct 14 06:01 ATLAS.root_0
[2025-10-14 07:31:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 06:01 start_atlas.sh
[2025-10-14 07:31:14] -rw-r--r--. 2 boincer umatlas    569672 Oct 14 06:01 input.tar.gz
[2025-10-14 07:31:14] -rw-------. 1 boincer umatlas 186260812 Oct 14 07:29 HITS.pool.root.1
[2025-10-14 07:31:14] -rw-------. 1 boincer umatlas   1126400 Oct 14 07:31 result.tar.gz
07:31:15 (4137360): run_atlas exited; CPU time 36079.470067
07:31:15 (4137360): called boinc_finish(0)

</stderr_txt>
]]>

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