Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:49:06 (1247402): wrapper (7.7.26015): starting
05:49:06 (1247402): wrapper: running run_atlas (--nthreads 8)
[2025-10-14 05:49:06] Arguments: --nthreads 8
[2025-10-14 05:49:06] Threads: 8
[2025-10-14 05:49:06] Checking for CVMFS
[2025-10-14 05:49:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 05:49:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 05:49:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 05:49:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 05:49:09] 2.13.2.0 3608313 131965 282684 151692 3 293 24915115 32935937 23154 16776704 0 191536032 99.620 204543823 29261 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-14 05:49:09] CVMFS is ok
[2025-10-14 05:49:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 05:49:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 05:49:09] Further information can be found at the LHC@home message board.
[2025-10-14 05:49:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 05:49:09] Checking for apptainer binary...
[2025-10-14 05:49:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 05:49:09] Running /usr/bin/apptainer --version
[2025-10-14 05:49:09] apptainer version 1.4.3-1.el9
[2025-10-14 05:49:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 05:49:10] c6-6-39-3.aglt2.org
[2025-10-14 05:49:10] apptainer works
[2025-10-14 05:49:10] Set ATHENA_PROC_NUMBER=8
[2025-10-14 05:49:10] Set ATHENA_CORE_NUMBER=8
[2025-10-14 05:49:10] Starting ATLAS job with PandaID=6840223553
[2025-10-14 05:49:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
08:40:07 (1247402): BOINC client no longer exists - exiting
08:40:07 (1247402): timer handler: client dead, exiting
08:49:12 (1740069): wrapper (7.7.26015): starting
08:49:12 (1740069): wrapper: running run_atlas (--nthreads 10)
[2025-10-14 08:49:12] Arguments: --nthreads 10
[2025-10-14 08:49:12] Threads: 10
[2025-10-14 08:49:12] This job has been restarted, cleaning up previous attempt
[2025-10-14 08:49:12] Checking for CVMFS
[2025-10-14 08:49:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 08:49:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 08:49:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 08:49:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 08:49:12] 2.13.2.0 3608313 132145 277908 151697 3 78 26715037 32935936 20323 16776704 0 191928400 99.619 205044338 29250 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-14 08:49:12] CVMFS is ok
[2025-10-14 08:49:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 08:49:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 08:49:12] Further information can be found at the LHC@home message board.
[2025-10-14 08:49:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 08:49:12] Checking for apptainer binary...
[2025-10-14 08:49:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 08:49:12] Running /usr/bin/apptainer --version
[2025-10-14 08:49:13] apptainer version 1.4.3-1.el9
[2025-10-14 08:49:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 08:49:13] c6-6-39-3.aglt2.org
[2025-10-14 08:49:13] apptainer works
[2025-10-14 08:49:14] Set ATHENA_PROC_NUMBER=10
[2025-10-14 08:49:14] Set ATHENA_CORE_NUMBER=10
[2025-10-14 08:49:14] Starting ATLAS job with PandaID=6840223553
[2025-10-14 08:49:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 11:18:50]  *** The last 200 lines of the pilot log: ***
[2025-10-14 11:18:50] 2025-10-14 15:18:04,737 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 11:18:50] 2025-10-14 15:18:04,737 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 11:18:50] 2025-10-14 15:18:04,740 | INFO     | fitting pss+swap vs Time
[2025-10-14 11:18:50] 2025-10-14 15:18:04,741 | INFO     | sum of square deviations: 964936620.6095877
[2025-10-14 11:18:50] 2025-10-14 15:18:04,741 | INFO     | sum of deviations: 18856327248.691784
[2025-10-14 11:18:50] 2025-10-14 15:18:04,742 | INFO     | mean x: 1760450630.760274
[2025-10-14 11:18:50] 2025-10-14 15:18:04,742 | INFO     | mean y: 2199336.705479452
[2025-10-14 11:18:50] 2025-10-14 15:18:04,742 | INFO     | -- intersect: -34399680009.329315
[2025-10-14 11:18:50] 2025-10-14 15:18:04,742 | INFO     | intersect: -34399680009.329315
[2025-10-14 11:18:50] 2025-10-14 15:18:04,742 | INFO     | chi2: 2.5635486319738154
[2025-10-14 11:18:50] 2025-10-14 15:18:04,742 | INFO     | sum of square deviations: 869160367.7588661
[2025-10-14 11:18:50] 2025-10-14 15:18:04,743 | INFO     | sum of deviations: 26823942336.836887
[2025-10-14 11:18:50] 2025-10-14 15:18:04,743 | INFO     | mean x: 1760450478.2695036
[2025-10-14 11:18:50] 2025-10-14 15:18:04,743 | INFO     | mean y: 2211658.2411347516
[2025-10-14 11:18:50] 2025-10-14 15:18:04,743 | INFO     | -- intersect: -54328638973.75535
[2025-10-14 11:18:50] 2025-10-14 15:18:04,743 | INFO     | intersect: -54328638973.75535
[2025-10-14 11:18:50] 2025-10-14 15:18:04,744 | INFO     | chi2: 1.8925909089337258
[2025-10-14 11:18:50] 2025-10-14 15:18:04,744 | INFO     | current chi2=1.8925909089337258 (change=26.173005445326105 %)
[2025-10-14 11:18:50] 2025-10-14 15:18:04,744 | INFO     | sum of square deviations: 779942377.3823526
[2025-10-14 11:18:50] 2025-10-14 15:18:04,745 | INFO     | sum of deviations: 25441474553.838245
[2025-10-14 11:18:50] 2025-10-14 15:18:04,745 | INFO     | mean x: 1760450325.7794118
[2025-10-14 11:18:50] 2025-10-14 15:18:04,745 | INFO     | mean y: 2209291.7279411764
[2025-10-14 11:18:50] 2025-10-14 15:18:04,745 | INFO     | -- intersect: -57423125534.84276
[2025-10-14 11:18:50] 2025-10-14 15:18:04,745 | INFO     | intersect: -57423125534.84276
[2025-10-14 11:18:50] 2025-10-14 15:18:04,745 | INFO     | chi2: 1.8943464754394443
[2025-10-14 11:18:50] 2025-10-14 15:18:04,745 | INFO     | current chi2=1.8943464754394443 (change=-0.09275995659873397 %)
[2025-10-14 11:18:50] 2025-10-14 15:18:04,745 | INFO     | right removable region: 135
[2025-10-14 11:18:50] 2025-10-14 15:18:04,745 | INFO     | sum of square deviations: 869137187.7588661
[2025-10-14 11:18:50] 2025-10-14 15:18:04,746 | INFO     | sum of deviations: -4221517094.8085117
[2025-10-14 11:18:50] 2025-10-14 15:18:04,746 | INFO     | mean x: 1760450783.2695036
[2025-10-14 11:18:50] 2025-10-14 15:18:04,746 | INFO     | mean y: 2235676.0212765955
[2025-10-14 11:18:50] 2025-10-14 15:18:04,746 | INFO     | -- intersect: 8552983683.139251
[2025-10-14 11:18:50] 2025-10-14 15:18:04,746 | INFO     | intersect: 8552983683.139251
[2025-10-14 11:18:50] 2025-10-14 15:18:04,747 | INFO     | chi2: 0.9783538502765087
[2025-10-14 11:18:50] 2025-10-14 15:18:04,747 | INFO     | current chi2=0.9783538502765087 (change=61.83595512587484 %)
[2025-10-14 11:18:50] 2025-10-14 15:18:04,747 | INFO     | sum of square deviations: 779896017.3823526
[2025-10-14 11:18:50] 2025-10-14 15:18:04,747 | INFO     | sum of deviations: -12499548235.39706
[2025-10-14 11:18:50] 2025-10-14 15:18:04,747 | INFO     | mean x: 1760450935.7794118
[2025-10-14 11:18:50] 2025-10-14 15:18:04,748 | INFO     | mean y: 2249739.786764706
[2025-10-14 11:18:50] 2025-10-14 15:18:04,748 | INFO     | -- intersect: 28217346236.473373
[2025-10-14 11:18:50] 2025-10-14 15:18:04,748 | INFO     | intersect: 28217346236.473373
[2025-10-14 11:18:50] 2025-10-14 15:18:04,748 | INFO     | chi2: 0.781623724003011
[2025-10-14 11:18:50] 2025-10-14 15:18:04,748 | INFO     | current chi2=0.781623724003011 (change=20.10827945511704 %)
[2025-10-14 11:18:50] 2025-10-14 15:18:04,748 | INFO     | left removable region: 20
[2025-10-14 11:18:50] 2025-10-14 15:18:04,748 | INFO     | sum of square deviations: 471553940.6434771
[2025-10-14 11:18:50] 2025-10-14 15:18:04,749 | INFO     | sum of deviations: -794567898.9217396
[2025-10-14 11:18:50] 2025-10-14 15:18:04,749 | INFO     | mean x: 1760450905.269565
[2025-10-14 11:18:50] 2025-10-14 15:18:04,749 | INFO     | mean y: 2256620.9652173915
[2025-10-14 11:18:50] 2025-10-14 15:18:04,749 | INFO     | -- intersect: 2968614563.0622115
[2025-10-14 11:18:50] 2025-10-14 15:18:04,749 | INFO     | intersect: 2968614563.0622115
[2025-10-14 11:18:50] 2025-10-14 15:18:04,749 | INFO     | chi2: 0.07424184564406344
[2025-10-14 11:18:50] 2025-10-14 15:18:04,749 | INFO     | -- intersect: 2968614563.0622115
[2025-10-14 11:18:50] 2025-10-14 15:18:04,749 | INFO     | current memory leak: -1.68 B/s (using 115 data points, chi2=0.07)
[2025-10-14 11:18:50] 2025-10-14 15:18:04,750 | INFO     | could have reported an average CPU frequency of 2932 MHz (8 samples)
[2025-10-14 11:18:50] 2025-10-14 15:18:04,750 | INFO     | ..............................
[2025-10-14 11:18:50] 2025-10-14 15:18:04,750 | INFO     | . Timing measurements:
[2025-10-14 11:18:50] 2025-10-14 15:18:04,750 | INFO     | . get job = 0 s
[2025-10-14 11:18:50] 2025-10-14 15:18:04,750 | INFO     | . initial setup = 1 s
[2025-10-14 11:18:50] 2025-10-14 15:18:04,750 | INFO     | . payload setup = 9 s
[2025-10-14 11:18:50] 2025-10-14 15:18:04,751 | INFO     | . stage-in = 0 s
[2025-10-14 11:18:50] 2025-10-14 15:18:04,751 | INFO     | . payload execution = 8873 s
[2025-10-14 11:18:50] 2025-10-14 15:18:04,751 | INFO     | . stage-out = 2 s
[2025-10-14 11:18:50] 2025-10-14 15:18:04,751 | INFO     | . log creation = 0 s
[2025-10-14 11:18:50] 2025-10-14 15:18:04,751 | INFO     | ..............................
[2025-10-14 11:18:50] 2025-10-14 15:18:04,833 | INFO     | 
[2025-10-14 11:18:50] 2025-10-14 15:18:04,833 | INFO     | job summary report
[2025-10-14 11:18:50] 2025-10-14 15:18:04,833 | INFO     | --------------------------------------------------
[2025-10-14 11:18:50] 2025-10-14 15:18:04,833 | INFO     | PanDA job id: 6840223553
[2025-10-14 11:18:50] 2025-10-14 15:18:04,833 | INFO     | task id: 46676269
[2025-10-14 11:18:50] 2025-10-14 15:18:04,833 | INFO     | errors: (none)
[2025-10-14 11:18:50] 2025-10-14 15:18:04,833 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 11:18:50] 2025-10-14 15:18:04,833 | INFO     | pilot state: finished 
[2025-10-14 11:18:50] 2025-10-14 15:18:04,834 | INFO     | transexitcode: 0
[2025-10-14 11:18:50] 2025-10-14 15:18:04,834 | INFO     | exeerrorcode: 0
[2025-10-14 11:18:50] 2025-10-14 15:18:04,834 | INFO     | exeerrordiag: 
[2025-10-14 11:18:50] 2025-10-14 15:18:04,834 | INFO     | exitcode: 0
[2025-10-14 11:18:50] 2025-10-14 15:18:04,834 | INFO     | exitmsg: OK
[2025-10-14 11:18:50] 2025-10-14 15:18:04,834 | INFO     | cpuconsumptiontime: 41766 s
[2025-10-14 11:18:50] 2025-10-14 15:18:04,834 | INFO     | nevents: 400
[2025-10-14 11:18:50] 2025-10-14 15:18:04,834 | INFO     | neventsw: 0
[2025-10-14 11:18:50] 2025-10-14 15:18:04,834 | INFO     | pid: 1760577
[2025-10-14 11:18:50] 2025-10-14 15:18:04,834 | INFO     | pgrp: 1760577
[2025-10-14 11:18:50] 2025-10-14 15:18:04,834 | INFO     | corecount: 10
[2025-10-14 11:18:50] 2025-10-14 15:18:04,834 | INFO     | event service: False
[2025-10-14 11:18:50] 2025-10-14 15:18:04,835 | INFO     | sizes: {0: 2347978, 1: 2348834, 8: 2349096, 12: 2349124, 8887: 2377273, 8890: 2386519, 8897: 2386657}
[2025-10-14 11:18:50] 2025-10-14 15:18:04,835 | INFO     | --------------------------------------------------
[2025-10-14 11:18:50] 2025-10-14 15:18:04,835 | INFO     | 
[2025-10-14 11:18:50] 2025-10-14 15:18:04,835 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-14 11:18:50] 2025-10-14 15:18:04,851 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 11:18:50] 2025-10-14 15:18:04,852 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 11:18:50] 2025-10-14 15:18:04,852 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 11:18:50] 2025-10-14 15:18:04,852 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 11:18:50] 2025-10-14 15:18:04,852 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 11:18:50] 2025-10-14 15:18:04,852 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 11:18:50] 2025-10-14 15:18:04,852 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 11:18:50] 2025-10-14 15:18:04,852 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 11:18:50] 2025-10-14 15:18:04,852 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 11:18:50] 2025-10-14 15:18:04,852 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 11:18:50] 2025-10-14 15:18:04,852 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 11:18:50] 2025-10-14 15:18:04,852 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 11:18:50] 2025-10-14 15:18:04,852 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 11:18:50] 2025-10-14 15:18:04,852 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 11:18:50] 2025-10-14 15:18:04,852 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 11:18:50] 2025-10-14 15:18:04,852 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 11:18:50] 2025-10-14 15:18:04,852 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 11:18:50] 2025-10-14 15:18:04,852 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 11:18:50] 2025-10-14 15:18:04,853 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 11:18:50] 2025-10-14 15:18:04,853 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 11:18:50] 2025-10-14 15:18:04,853 | INFO     | job 6840223553 has completed (purged errors)
[2025-10-14 11:18:50] 2025-10-14 15:18:04,853 | INFO     | overall cleanup function is called
[2025-10-14 11:18:50] 2025-10-14 15:18:05,861 | INFO     | --- collectZombieJob: --- 10, [1760577]
[2025-10-14 11:18:50] 2025-10-14 15:18:05,862 | INFO     | zombie collector waiting for pid 1760577
[2025-10-14 11:18:50] 2025-10-14 15:18:05,862 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 11:18:50] 2025-10-14 15:18:05,862 | INFO     | collected zombie processes
[2025-10-14 11:18:50] 2025-10-14 15:18:05,862 | INFO     | will attempt to kill all subprocesses of pid=1760577
[2025-10-14 11:18:50] 2025-10-14 15:18:06,340 | INFO     | process IDs to be killed: [1760577] (in reverse order)
[2025-10-14 11:18:50] 2025-10-14 15:18:06,448 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 11:18:50] 2025-10-14 15:18:06,449 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 11:18:50] 2025-10-14 15:18:06,466 | INFO     | did not find any defunct processes belonging to 1760577
[2025-10-14 11:18:50] 2025-10-14 15:18:06,479 | INFO     | did not find any defunct processes belonging to 1760577
[2025-10-14 11:18:50] 2025-10-14 15:18:06,479 | INFO     | ready for new job
[2025-10-14 11:18:50] 2025-10-14 15:18:06,479 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 11:18:50] 2025-10-14 15:18:06,482 | INFO     | ***************************************
[2025-10-14 11:18:50] 2025-10-14 15:18:06,482 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 11:18:50] 2025-10-14 15:18:06,482 | INFO     | ***************************************
[2025-10-14 11:18:50] 2025-10-14 15:18:06,482 | INFO     | 
[2025-10-14 11:18:50] 2025-10-14 15:18:06,497 | INFO     | architecture information:
[2025-10-14 11:18:50] 2025-10-14 15:18:06,505 | INFO     | executing command: cat /etc/os-release
[2025-10-14 11:18:50] 2025-10-14 15:18:06,534 | INFO     | cat /etc/os-release:
[2025-10-14 11:18:50] NAME="CentOS Linux"
[2025-10-14 11:18:50] VERSION="7 (Core)"
[2025-10-14 11:18:50] ID="centos"
[2025-10-14 11:18:50] ID_LIKE="rhel fedora"
[2025-10-14 11:18:50] VERSION_ID="7"
[2025-10-14 11:18:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 11:18:50] ANSI_COLOR="0;31"
[2025-10-14 11:18:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 11:18:50] HOME_URL="https://www.centos.org/"
[2025-10-14 11:18:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 11:18:50] 
[2025-10-14 11:18:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 11:18:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 11:18:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 11:18:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 11:18:50] 
[2025-10-14 11:18:50] 2025-10-14 15:18:06,534 | INFO     | ***************************************
[2025-10-14 11:18:50] 2025-10-14 15:18:07,037 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-14 11:18:50] 2025-10-14 15:18:07,052 | INFO     | sufficient remaining disk space (76522979328 B)
[2025-10-14 11:18:50] 2025-10-14 15:18:07,053 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 11:18:50] 2025-10-14 15:18:07,053 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 11:18:50] 2025-10-14 15:18:07,053 | INFO     | update_server=False
[2025-10-14 11:18:50] 2025-10-14 15:18:07,053 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 11:18:50] 2025-10-14 15:18:07,053 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 11:18:50] 2025-10-14 15:18:07,053 | INFO     | aborting loop
[2025-10-14 11:18:50] 2025-10-14 15:18:07,925 | INFO     | all data control threads have been joined
[2025-10-14 11:18:50] 2025-10-14 15:18:08,058 | INFO     | [job] retrieve thread has finished
[2025-10-14 11:18:50] 2025-10-14 15:18:08,059 | INFO     | [job] job monitor thread has finished
[2025-10-14 11:18:50] 2025-10-14 15:18:08,076 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 11:18:50] 2025-10-14 15:18:08,096 | INFO     | [data] copytool_in thread has finished
[2025-10-14 11:18:50] 2025-10-14 15:18:08,171 | INFO     | all payload control threads have been joined
[2025-10-14 11:18:50] 2025-10-14 15:18:08,281 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 11:18:50] 2025-10-14 15:18:08,346 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 11:18:50] 2025-10-14 15:18:08,473 | INFO     | all job control threads have been joined
[2025-10-14 11:18:50] 2025-10-14 15:18:08,926 | INFO     | [job] validate thread has finished
[2025-10-14 11:18:50] 2025-10-14 15:18:08,931 | INFO     | [data] control thread has finished
[2025-10-14 11:18:50] 2025-10-14 15:18:08,938 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 11:18:50] 2025-10-14 15:18:08,986 | INFO     | [payload] validate_post thread has finished
[2025-10-14 11:18:50] 2025-10-14 15:18:09,172 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 11:18:50] 2025-10-14 15:18:09,177 | INFO     | [payload] control thread has finished
[2025-10-14 11:18:50] 2025-10-14 15:18:09,487 | INFO     | [job] control thread has finished
[2025-10-14 11:18:50] 2025-10-14 15:18:09,510 | INFO     | [payload] failed_post thread has finished
[2025-10-14 11:18:50] 2025-10-14 15:18:09,848 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 11:18:50] 2025-10-14 15:18:10,288 | INFO     | [data] copytool_out thread has finished
[2025-10-14 11:18:50] 2025-10-14 15:18:10,853 | INFO     | [job] queue monitor thread has finished
[2025-10-14 11:18:50] 2025-10-14 15:18:12,353 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 11:18:50] 2025-10-14 15:18:17,372 | INFO     | job.realtimelogging is not enabled
[2025-10-14 11:18:50] 2025-10-14 15:18:18,377 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 11:18:50] 2025-10-14 15:18:37,528 | INFO     | PID=1747903 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 11:18:50] 2025-10-14 15:18:37,529 | INFO     | .. there are 29 such processes running
[2025-10-14 11:18:50] 2025-10-14 15:18:37,530 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 11:18:50] 2025-10-14 15:18:37,530 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 11:18:50] 2025-10-14 15:18:37,530 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 11:18:50] 2025-10-14 15:18:44,603 | INFO     | [monitor] cgroup control has ended
[2025-10-14 11:18:50] 2025-10-14 15:18:44,740 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140624310536000)>', '<ExcThread(monitor, started 140623956907776)>']
[2025-10-14 11:18:50] 2025-10-14 15:18:45,571 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 11:18:50] 2025-10-14 15:18:45,572 | INFO     | [monitor] control thread has ended
[2025-10-14 11:18:50] 2025-10-14 15:18:49,764 | INFO     | all workflow threads have been joined
[2025-10-14 11:18:50] 2025-10-14 15:18:49,765 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 11:18:50] 2025-10-14 15:18:49,765 | INFO     | traces error code: 0
[2025-10-14 11:18:50] 2025-10-14 15:18:49,765 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 11:18:50] 2025-10-14 15:18:49,927 [wrapper] ==== pilot stdout END ====
[2025-10-14 11:18:50] 2025-10-14 15:18:49,930 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 11:18:50] 2025-10-14 15:18:49,932 [wrapper] pilotpid: 1747903
[2025-10-14 11:18:50] 2025-10-14 15:18:49,935 [wrapper] Pilot exit status: 0
[2025-10-14 11:18:50] 2025-10-14 15:18:49,947 [wrapper] pandaids: 6840223553 6840223553
[2025-10-14 11:18:50] 2025-10-14 15:18:50,017 [wrapper] cleanup supervisor_pilot 2253338 1747904
[2025-10-14 11:18:50] 2025-10-14 15:18:50,020 [wrapper] Test setup, not cleaning
[2025-10-14 11:18:50] 2025-10-14 15:18:50,023 [wrapper] apfmon messages muted
[2025-10-14 11:18:50] 2025-10-14 15:18:50,026 [wrapper] ==== wrapper stdout END ====
[2025-10-14 11:18:50] 2025-10-14 15:18:50,028 [wrapper] ==== wrapper stderr END ====
[2025-10-14 11:18:50]  *** Error codes and diagnostics ***
[2025-10-14 11:18:50]     "exeErrorCode": 0,
[2025-10-14 11:18:50]     "exeErrorDiag": "",
[2025-10-14 11:18:50]     "pilotErrorCode": 0,
[2025-10-14 11:18:50]     "pilotErrorDiag": "",
[2025-10-14 11:18:50]  *** Listing of results directory ***
[2025-10-14 11:18:50] total 632092
[2025-10-14 11:18:50] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-14 11:18:50] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-14 11:18:50] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 11:04 queuedata.json
[2025-10-14 11:18:50] -rwx------. 1 boincer umatlas     36292 Oct 12 11:04 runpilot2-wrapper.sh
[2025-10-14 11:18:50] -rw-r--r--. 1 boincer umatlas       100 Oct 14 05:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 11:18:50] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 14 05:49 run_atlas
[2025-10-14 11:18:50] -rw-r--r--. 1 boincer umatlas       105 Oct 14 05:49 job.xml
[2025-10-14 11:18:50] -rw-r--r--. 3 boincer umatlas 221855498 Oct 14 05:49 EVNT.46676267._004548.pool.root.1
[2025-10-14 11:18:50] -rw-r--r--. 3 boincer umatlas 221855498 Oct 14 05:49 ATLAS.root_0
[2025-10-14 11:18:50] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 05:49 start_atlas.sh
[2025-10-14 11:18:50] drwxrwx--x. 2 boincer umatlas      4096 Oct 14 05:49 shared
[2025-10-14 11:18:50] -rw-r--r--. 2 boincer umatlas    569682 Oct 14 05:49 input.tar.gz
[2025-10-14 11:18:50] -rw-r--r--. 1 boincer umatlas         0 Oct 14 05:49 boinc_lockfile
[2025-10-14 11:18:50] -rw-r--r--. 1 boincer umatlas      2549 Oct 14 08:49 pandaJob.out
[2025-10-14 11:18:50] -rw-------. 1 boincer umatlas    973969 Oct 14 08:49 agis_schedconf.cvmfs.json
[2025-10-14 11:18:50] -rw-r--r--. 1 boincer umatlas      6842 Oct 14 11:11 init_data.xml
[2025-10-14 11:18:50] -rw-------. 1 boincer umatlas 196436838 Oct 14 11:17 HITS.46676269._081662.pool.root.1
[2025-10-14 11:18:50] -rw-r--r--. 1 boincer umatlas       531 Oct 14 11:17 boinc_task_state.xml
[2025-10-14 11:18:50] -rw-------. 1 boincer umatlas      1049 Oct 14 11:17 memory_monitor_summary.json
[2025-10-14 11:18:50] -rw-------. 1 boincer umatlas   1560740 Oct 14 11:17 agis_ddmendpoints.agis.ALL.json
[2025-10-14 11:18:50] -rw-------. 1 boincer umatlas    431545 Oct 14 11:17 log.46676269._081662.job.log.tgz.1
[2025-10-14 11:18:50] -rw-------. 1 boincer umatlas      7827 Oct 14 11:18 heartbeat.json
[2025-10-14 11:18:50] -rw-------. 1 boincer umatlas        96 Oct 14 11:18 pilot_heartbeat.json
[2025-10-14 11:18:50] -rw-r--r--. 1 boincer umatlas      8192 Oct 14 11:18 boinc_mmap_file
[2025-10-14 11:18:50] -rw-r--r--. 1 boincer umatlas        28 Oct 14 11:18 wrapper_checkpoint.txt
[2025-10-14 11:18:50] -rw-------. 1 boincer umatlas      4896 Oct 14 11:18 pilotlog.txt
[2025-10-14 11:18:50] -rw-------. 1 boincer umatlas   1174054 Oct 14 11:18 log.46676269._081662.job.log.1
[2025-10-14 11:18:50] -rw-------. 1 boincer umatlas       357 Oct 14 11:18 output.list
[2025-10-14 11:18:50] -rw-r--r--. 1 boincer umatlas       620 Oct 14 11:18 runtime_log
[2025-10-14 11:18:50] -rw-------. 1 boincer umatlas   1628160 Oct 14 11:18 result.tar.gz
[2025-10-14 11:18:50] -rw-------. 1 boincer umatlas       781 Oct 14 11:18 s6dNDmknCS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmFCUMDmfKQBTm.diag
[2025-10-14 11:18:50] -rw-r--r--. 1 boincer umatlas      8795 Oct 14 11:18 runtime_log.err
[2025-10-14 11:18:50] -rw-r--r--. 1 boincer umatlas     23259 Oct 14 11:18 stderr.txt
[2025-10-14 11:18:50] HITS file was successfully produced:
[2025-10-14 11:18:50] -rw-------. 1 boincer umatlas 196436838 Oct 14 11:17 shared/HITS.pool.root.1
[2025-10-14 11:18:50]  *** Contents of shared directory: ***
[2025-10-14 11:18:50] total 410664
[2025-10-14 11:18:50] -rw-r--r--. 3 boincer umatlas 221855498 Oct 14 05:49 ATLAS.root_0
[2025-10-14 11:18:50] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 05:49 start_atlas.sh
[2025-10-14 11:18:50] -rw-r--r--. 2 boincer umatlas    569682 Oct 14 05:49 input.tar.gz
[2025-10-14 11:18:50] -rw-------. 1 boincer umatlas 196436838 Oct 14 11:17 HITS.pool.root.1
[2025-10-14 11:18:50] -rw-------. 1 boincer umatlas   1628160 Oct 14 11:18 result.tar.gz
11:18:51 (1740069): run_atlas exited; CPU time 41982.050412
11:18:51 (1740069): called boinc_finish(0)

</stderr_txt>
]]>

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