Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:20:52 (1371189): wrapper (7.7.26015): starting
05:20:52 (1371189): wrapper: running run_atlas (--nthreads 9)
[2025-10-14 05:20:52] Arguments: --nthreads 9
[2025-10-14 05:20:52] Threads: 9
[2025-10-14 05:20:52] Checking for CVMFS
[2025-10-14 05:20:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 05:20:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 05:20:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 05:20:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 05:20:52] 2.13.2.0 1863115 18354 190512 151475 -8318 1602 30058872 32503808 35778 16776704 0 123706270 99.674 111602183 17172 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-14 05:20:52] CVMFS is ok
[2025-10-14 05:20:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 05:20:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 05:20:52] Further information can be found at the LHC@home message board.
[2025-10-14 05:20:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 05:20:52] Checking for apptainer binary...
[2025-10-14 05:20:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 05:20:52] Running /usr/bin/apptainer --version
[2025-10-14 05:20:52] apptainer version 1.4.3-1.el9
[2025-10-14 05:20:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 05:20:52] c7-3-16.aglt2.org
[2025-10-14 05:20:52] apptainer works
[2025-10-14 05:20:52] Set ATHENA_PROC_NUMBER=9
[2025-10-14 05:20:52] Set ATHENA_CORE_NUMBER=9
[2025-10-14 05:20:52] Starting ATLAS job with PandaID=6839865941
[2025-10-14 05:20:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 07:39:30]  *** The last 200 lines of the pilot log: ***
[2025-10-14 07:39:30] 2025-10-14 11:38:33,548 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 07:39:30] 2025-10-14 11:38:33,548 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 07:39:30] 2025-10-14 11:38:33,550 | INFO     | fitting pss+swap vs Time
[2025-10-14 07:39:30] 2025-10-14 11:38:33,550 | INFO     | sum of square deviations: 762881131.8814822
[2025-10-14 07:39:30] 2025-10-14 11:38:33,551 | INFO     | sum of deviations: 5638083730.614817
[2025-10-14 07:39:30] 2025-10-14 11:38:33,551 | INFO     | mean x: 1760437796.0296297
[2025-10-14 07:39:30] 2025-10-14 11:38:33,551 | INFO     | mean y: 2616359.0962962965
[2025-10-14 07:39:30] 2025-10-14 11:38:33,551 | INFO     | -- intersect: -13007923922.683855
[2025-10-14 07:39:30] 2025-10-14 11:38:33,551 | INFO     | intersect: -13007923922.683855
[2025-10-14 07:39:30] 2025-10-14 11:38:33,551 | INFO     | chi2: 2.1297338732444113
[2025-10-14 07:39:30] 2025-10-14 11:38:33,551 | INFO     | sum of square deviations: 681215704.3769239
[2025-10-14 07:39:30] 2025-10-14 11:38:33,552 | INFO     | sum of deviations: 14977228752.56923
[2025-10-14 07:39:30] 2025-10-14 11:38:33,552 | INFO     | mean x: 1760437643.5307693
[2025-10-14 07:39:30] 2025-10-14 11:38:33,552 | INFO     | mean y: 2633255.107692308
[2025-10-14 07:39:30] 2025-10-14 11:38:33,552 | INFO     | -- intersect: -38702401174.34728
[2025-10-14 07:39:30] 2025-10-14 11:38:33,552 | INFO     | intersect: -38702401174.34728
[2025-10-14 07:39:30] 2025-10-14 11:38:33,552 | INFO     | chi2: 1.3263050622540107
[2025-10-14 07:39:30] 2025-10-14 11:38:33,553 | INFO     | current chi2=1.3263050622540107 (change=37.7243758520151 %)
[2025-10-14 07:39:30] 2025-10-14 11:38:33,553 | INFO     | sum of square deviations: 605596901.8720003
[2025-10-14 07:39:30] 2025-10-14 11:38:33,553 | INFO     | sum of deviations: 14417317384.256
[2025-10-14 07:39:30] 2025-10-14 11:38:33,553 | INFO     | mean x: 1760437491.032
[2025-10-14 07:39:30] 2025-10-14 11:38:33,554 | INFO     | mean y: 2632124.936
[2025-10-14 07:39:30] 2025-10-14 11:38:33,554 | INFO     | -- intersect: -41907730964.596756
[2025-10-14 07:39:30] 2025-10-14 11:38:33,554 | INFO     | intersect: -41907730964.596756
[2025-10-14 07:39:30] 2025-10-14 11:38:33,554 | INFO     | chi2: 1.3279062160412427
[2025-10-14 07:39:30] 2025-10-14 11:38:33,554 | INFO     | current chi2=1.3279062160412427 (change=-0.12072288893408255 %)
[2025-10-14 07:39:30] 2025-10-14 11:38:33,554 | INFO     | right removable region: 124
[2025-10-14 07:39:30] 2025-10-14 11:38:33,554 | INFO     | sum of square deviations: 681213264.3769239
[2025-10-14 07:39:30] 2025-10-14 11:38:33,555 | INFO     | sum of deviations: -14620095090.830765
[2025-10-14 07:39:30] 2025-10-14 11:38:33,555 | INFO     | mean x: 1760437948.5307693
[2025-10-14 07:39:30] 2025-10-14 11:38:33,555 | INFO     | mean y: 2653586.707692308
[2025-10-14 07:39:30] 2025-10-14 11:38:33,555 | INFO     | -- intersect: 37784904101.99691
[2025-10-14 07:39:30] 2025-10-14 11:38:33,555 | INFO     | intersect: 37784904101.99691
[2025-10-14 07:39:30] 2025-10-14 11:38:33,555 | INFO     | chi2: 0.842981865432884
[2025-10-14 07:39:30] 2025-10-14 11:38:33,555 | INFO     | current chi2=0.842981865432884 (change=60.41844119478198 %)
[2025-10-14 07:39:30] 2025-10-14 11:38:33,556 | INFO     | sum of square deviations: 605592021.8720003
[2025-10-14 07:39:30] 2025-10-14 11:38:33,556 | INFO     | sum of deviations: -14709661981.495998
[2025-10-14 07:39:30] 2025-10-14 11:38:33,556 | INFO     | mean x: 1760438101.032
[2025-10-14 07:39:30] 2025-10-14 11:38:33,556 | INFO     | mean y: 2653749.624
[2025-10-14 07:39:30] 2025-10-14 11:38:33,556 | INFO     | -- intersect: 42763206184.71001
[2025-10-14 07:39:30] 2025-10-14 11:38:33,556 | INFO     | intersect: 42763206184.71001
[2025-10-14 07:39:30] 2025-10-14 11:38:33,557 | INFO     | chi2: 0.841225587576082
[2025-10-14 07:39:30] 2025-10-14 11:38:33,557 | INFO     | current chi2=0.841225587576082 (change=0.20834111963963964 %)
[2025-10-14 07:39:30] 2025-10-14 11:38:33,557 | INFO     | left removable region: 20
[2025-10-14 07:39:30] 2025-10-14 11:38:33,557 | INFO     | sum of square deviations: 348768845.8461526
[2025-10-14 07:39:30] 2025-10-14 11:38:33,557 | INFO     | sum of deviations: -4144218957.153845
[2025-10-14 07:39:30] 2025-10-14 11:38:33,557 | INFO     | mean x: 1760438070.5384614
[2025-10-14 07:39:30] 2025-10-14 11:38:33,557 | INFO     | mean y: 2671767.4134615385
[2025-10-14 07:39:30] 2025-10-14 11:38:33,557 | INFO     | -- intersect: 20920941594.87119
[2025-10-14 07:39:30] 2025-10-14 11:38:33,557 | INFO     | intersect: 20920941594.87119
[2025-10-14 07:39:30] 2025-10-14 11:38:33,558 | INFO     | chi2: 0.007783480136175342
[2025-10-14 07:39:30] 2025-10-14 11:38:33,558 | INFO     | -- intersect: 20920941594.87119
[2025-10-14 07:39:30] 2025-10-14 11:38:33,558 | INFO     | current memory leak: -11.88 B/s (using 104 data points, chi2=0.01)
[2025-10-14 07:39:30] 2025-10-14 11:38:33,558 | INFO     | could have reported an average CPU frequency of 3056 MHz (8 samples)
[2025-10-14 07:39:30] 2025-10-14 11:38:33,558 | INFO     | ..............................
[2025-10-14 07:39:30] 2025-10-14 11:38:33,558 | INFO     | . Timing measurements:
[2025-10-14 07:39:30] 2025-10-14 11:38:33,558 | INFO     | . get job = 0 s
[2025-10-14 07:39:30] 2025-10-14 11:38:33,558 | INFO     | . initial setup = 2 s
[2025-10-14 07:39:30] 2025-10-14 11:38:33,558 | INFO     | . payload setup = 10 s
[2025-10-14 07:39:30] 2025-10-14 11:38:33,559 | INFO     | . stage-in = 0 s
[2025-10-14 07:39:30] 2025-10-14 11:38:33,559 | INFO     | . payload execution = 8194 s
[2025-10-14 07:39:30] 2025-10-14 11:38:33,559 | INFO     | . stage-out = 1 s
[2025-10-14 07:39:30] 2025-10-14 11:38:33,559 | INFO     | . log creation = 0 s
[2025-10-14 07:39:30] 2025-10-14 11:38:33,559 | INFO     | ..............................
[2025-10-14 07:39:30] 2025-10-14 11:38:33,710 | INFO     | 
[2025-10-14 07:39:30] 2025-10-14 11:38:33,710 | INFO     | job summary report
[2025-10-14 07:39:30] 2025-10-14 11:38:33,710 | INFO     | --------------------------------------------------
[2025-10-14 07:39:30] 2025-10-14 11:38:33,710 | INFO     | PanDA job id: 6839865941
[2025-10-14 07:39:30] 2025-10-14 11:38:33,717 | INFO     | task id: 46676269
[2025-10-14 07:39:30] 2025-10-14 11:38:33,717 | INFO     | errors: (none)
[2025-10-14 07:39:30] 2025-10-14 11:38:33,717 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 07:39:30] 2025-10-14 11:38:33,717 | INFO     | pilot state: finished 
[2025-10-14 07:39:30] 2025-10-14 11:38:33,717 | INFO     | transexitcode: 0
[2025-10-14 07:39:30] 2025-10-14 11:38:33,717 | INFO     | exeerrorcode: 0
[2025-10-14 07:39:30] 2025-10-14 11:38:33,717 | INFO     | exeerrordiag: 
[2025-10-14 07:39:30] 2025-10-14 11:38:33,717 | INFO     | exitcode: 0
[2025-10-14 07:39:30] 2025-10-14 11:38:33,717 | INFO     | exitmsg: OK
[2025-10-14 07:39:30] 2025-10-14 11:38:33,718 | INFO     | cpuconsumptiontime: 34588 s
[2025-10-14 07:39:30] 2025-10-14 11:38:33,718 | INFO     | nevents: 400
[2025-10-14 07:39:30] 2025-10-14 11:38:33,718 | INFO     | neventsw: 0
[2025-10-14 07:39:30] 2025-10-14 11:38:33,728 | INFO     | pid: 1398349
[2025-10-14 07:39:30] 2025-10-14 11:38:33,728 | INFO     | pgrp: 1398349
[2025-10-14 07:39:30] 2025-10-14 11:38:33,728 | INFO     | corecount: 9
[2025-10-14 07:39:30] 2025-10-14 11:38:33,729 | INFO     | event service: False
[2025-10-14 07:39:30] 2025-10-14 11:38:33,729 | INFO     | sizes: {0: 2348857, 8: 2349119, 11: 2349147, 8209: 2377086, 8211: 2386084, 8213: 2386140, 8224: 2386462}
[2025-10-14 07:39:30] 2025-10-14 11:38:33,729 | INFO     | --------------------------------------------------
[2025-10-14 07:39:30] 2025-10-14 11:38:33,729 | INFO     | 
[2025-10-14 07:39:30] 2025-10-14 11:38:33,729 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-14 07:39:30] 2025-10-14 11:38:33,844 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 07:39:30] 2025-10-14 11:38:33,844 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 07:39:30] 2025-10-14 11:38:33,844 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 07:39:30] 2025-10-14 11:38:33,844 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 07:39:30] 2025-10-14 11:38:33,844 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 07:39:30] 2025-10-14 11:38:33,845 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 07:39:30] 2025-10-14 11:38:33,845 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 07:39:30] 2025-10-14 11:38:33,845 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 07:39:30] 2025-10-14 11:38:33,845 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 07:39:30] 2025-10-14 11:38:33,845 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 07:39:30] 2025-10-14 11:38:33,845 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 07:39:30] 2025-10-14 11:38:33,845 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 07:39:30] 2025-10-14 11:38:33,845 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 07:39:30] 2025-10-14 11:38:33,845 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 07:39:30] 2025-10-14 11:38:33,845 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 07:39:30] 2025-10-14 11:38:33,845 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 07:39:30] 2025-10-14 11:38:33,845 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 07:39:30] 2025-10-14 11:38:33,845 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 07:39:30] 2025-10-14 11:38:33,845 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 07:39:30] 2025-10-14 11:38:33,845 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 07:39:30] 2025-10-14 11:38:33,846 | INFO     | job 6839865941 has completed (purged errors)
[2025-10-14 07:39:30] 2025-10-14 11:38:33,846 | INFO     | overall cleanup function is called
[2025-10-14 07:39:30] 2025-10-14 11:38:34,875 | INFO     | --- collectZombieJob: --- 10, [1398349]
[2025-10-14 07:39:30] 2025-10-14 11:38:34,875 | INFO     | zombie collector waiting for pid 1398349
[2025-10-14 07:39:30] 2025-10-14 11:38:34,875 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 07:39:30] 2025-10-14 11:38:34,875 | INFO     | collected zombie processes
[2025-10-14 07:39:30] 2025-10-14 11:38:34,875 | INFO     | will attempt to kill all subprocesses of pid=1398349
[2025-10-14 07:39:30] 2025-10-14 11:38:35,384 | INFO     | process IDs to be killed: [1398349] (in reverse order)
[2025-10-14 07:39:30] 2025-10-14 11:38:35,542 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 07:39:30] 2025-10-14 11:38:35,543 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 07:39:30] 2025-10-14 11:38:35,563 | INFO     | did not find any defunct processes belonging to 1398349
[2025-10-14 07:39:30] 2025-10-14 11:38:35,584 | INFO     | did not find any defunct processes belonging to 1398349
[2025-10-14 07:39:30] 2025-10-14 11:38:35,584 | INFO     | ready for new job
[2025-10-14 07:39:30] 2025-10-14 11:38:35,584 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 07:39:30] 2025-10-14 11:38:35,586 | INFO     | ***************************************
[2025-10-14 07:39:30] 2025-10-14 11:38:35,586 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 07:39:30] 2025-10-14 11:38:35,586 | INFO     | ***************************************
[2025-10-14 07:39:30] 2025-10-14 11:38:35,586 | INFO     | 
[2025-10-14 07:39:30] 2025-10-14 11:38:35,604 | INFO     | architecture information:
[2025-10-14 07:39:30] 2025-10-14 11:38:35,605 | INFO     | executing command: cat /etc/os-release
[2025-10-14 07:39:30] 2025-10-14 11:38:35,623 | INFO     | cat /etc/os-release:
[2025-10-14 07:39:30] NAME="CentOS Linux"
[2025-10-14 07:39:30] VERSION="7 (Core)"
[2025-10-14 07:39:30] ID="centos"
[2025-10-14 07:39:30] ID_LIKE="rhel fedora"
[2025-10-14 07:39:30] VERSION_ID="7"
[2025-10-14 07:39:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 07:39:30] ANSI_COLOR="0;31"
[2025-10-14 07:39:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 07:39:30] HOME_URL="https://www.centos.org/"
[2025-10-14 07:39:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 07:39:30] 
[2025-10-14 07:39:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 07:39:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 07:39:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 07:39:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 07:39:30] 
[2025-10-14 07:39:30] 2025-10-14 11:38:35,623 | INFO     | ***************************************
[2025-10-14 07:39:30] 2025-10-14 11:38:36,126 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-14 07:39:30] 2025-10-14 11:38:36,179 | INFO     | sufficient remaining disk space (95571410944 B)
[2025-10-14 07:39:30] 2025-10-14 11:38:36,180 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 07:39:30] 2025-10-14 11:38:36,180 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 07:39:30] 2025-10-14 11:38:36,180 | INFO     | update_server=False
[2025-10-14 07:39:30] 2025-10-14 11:38:36,180 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 07:39:30] 2025-10-14 11:38:36,309 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 07:39:30] 2025-10-14 11:38:36,309 | INFO     | aborting loop
[2025-10-14 07:39:30] 2025-10-14 11:38:36,516 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 07:39:30] 2025-10-14 11:38:36,797 | INFO     | all data control threads have been joined
[2025-10-14 07:39:30] 2025-10-14 11:38:37,186 | INFO     | [job] retrieve thread has finished
[2025-10-14 07:39:30] 2025-10-14 11:38:37,314 | INFO     | [job] job monitor thread has finished
[2025-10-14 07:39:30] 2025-10-14 11:38:37,334 | INFO     | [job] validate thread has finished
[2025-10-14 07:39:30] 2025-10-14 11:38:37,366 | INFO     | all job control threads have been joined
[2025-10-14 07:39:30] 2025-10-14 11:38:37,533 | INFO     | all payload control threads have been joined
[2025-10-14 07:39:30] 2025-10-14 11:38:37,657 | INFO     | [payload] validate_post thread has finished
[2025-10-14 07:39:30] 2025-10-14 11:38:37,803 | INFO     | [data] control thread has finished
[2025-10-14 07:39:30] 2025-10-14 11:38:37,812 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 07:39:30] 2025-10-14 11:38:37,812 | INFO     | [data] copytool_in thread has finished
[2025-10-14 07:39:30] 2025-10-14 11:38:37,996 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 07:39:30] 2025-10-14 11:38:38,209 | INFO     | [payload] failed_post thread has finished
[2025-10-14 07:39:30] 2025-10-14 11:38:38,372 | INFO     | [job] control thread has finished
[2025-10-14 07:39:30] 2025-10-14 11:38:38,523 | INFO     | [data] copytool_out thread has finished
[2025-10-14 07:39:30] 2025-10-14 11:38:38,527 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 07:39:30] 2025-10-14 11:38:38,539 | INFO     | [payload] control thread has finished
[2025-10-14 07:39:30] 2025-10-14 11:38:38,616 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 07:39:30] 2025-10-14 11:38:38,647 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 07:39:30] 2025-10-14 11:38:39,653 | INFO     | [job] queue monitor thread has finished
[2025-10-14 07:39:30] 2025-10-14 11:38:42,536 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 07:39:30] 2025-10-14 11:38:47,221 | INFO     | job.realtimelogging is not enabled
[2025-10-14 07:39:30] 2025-10-14 11:38:48,227 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 07:39:30] 2025-10-14 11:39:06,325 | INFO     | PID=1377753 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 07:39:30] 2025-10-14 11:39:06,326 | INFO     | .. there are 39 such processes running
[2025-10-14 07:39:30] 2025-10-14 11:39:06,326 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 07:39:30] 2025-10-14 11:39:06,326 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 07:39:30] 2025-10-14 11:39:06,326 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 07:39:30] 2025-10-14 11:39:24,123 | INFO     | [monitor] cgroup control has ended
[2025-10-14 07:39:30] 2025-10-14 11:39:25,290 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140051498927936)>', '<ExcThread(monitor, started 140050998212352)>']
[2025-10-14 07:39:30] 2025-10-14 11:39:25,443 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 07:39:30] 2025-10-14 11:39:25,443 | INFO     | [monitor] control thread has ended
[2025-10-14 07:39:30] 2025-10-14 11:39:30,316 | INFO     | all workflow threads have been joined
[2025-10-14 07:39:30] 2025-10-14 11:39:30,316 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 07:39:30] 2025-10-14 11:39:30,316 | INFO     | traces error code: 0
[2025-10-14 07:39:30] 2025-10-14 11:39:30,317 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 07:39:30] 2025-10-14 11:39:30,547 [wrapper] ==== pilot stdout END ====
[2025-10-14 07:39:30] 2025-10-14 11:39:30,550 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 07:39:30] 2025-10-14 11:39:30,558 [wrapper] pilotpid: 1377753
[2025-10-14 07:39:30] 2025-10-14 11:39:30,561 [wrapper] Pilot exit status: 0
[2025-10-14 07:39:30] 2025-10-14 11:39:30,570 [wrapper] pandaids: 6839865941
[2025-10-14 07:39:30] 2025-10-14 11:39:30,697 [wrapper] cleanup supervisor_pilot 2407671 1377755
[2025-10-14 07:39:30] 2025-10-14 11:39:30,713 [wrapper] Test setup, not cleaning
[2025-10-14 07:39:30] 2025-10-14 11:39:30,716 [wrapper] apfmon messages muted
[2025-10-14 07:39:30] 2025-10-14 11:39:30,718 [wrapper] ==== wrapper stdout END ====
[2025-10-14 07:39:30] 2025-10-14 11:39:30,721 [wrapper] ==== wrapper stderr END ====
[2025-10-14 07:39:30]  *** Error codes and diagnostics ***
[2025-10-14 07:39:30]     "exeErrorCode": 0,
[2025-10-14 07:39:30]     "exeErrorDiag": "",
[2025-10-14 07:39:30]     "pilotErrorCode": 0,
[2025-10-14 07:39:30]     "pilotErrorDiag": "",
[2025-10-14 07:39:30]  *** Listing of results directory ***
[2025-10-14 07:39:30] total 410824
[2025-10-14 07:39:30] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 05:51 pilot3.tar.gz
[2025-10-14 07:39:30] -rwx------. 1 boincer umatlas     36292 Oct 12 06:02 runpilot2-wrapper.sh
[2025-10-14 07:39:30] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 06:02 queuedata.json
[2025-10-14 07:39:30] -rw-r--r--. 1 boincer umatlas       100 Oct 14 05:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 07:39:30] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 14 05:20 run_atlas
[2025-10-14 07:39:30] -rw-r--r--. 1 boincer umatlas       105 Oct 14 05:20 job.xml
[2025-10-14 07:39:30] -rw-r--r--. 2 boincer umatlas 221468151 Oct 14 05:20 EVNT.46676267._003601.pool.root.1
[2025-10-14 07:39:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 05:20 start_atlas.sh
[2025-10-14 07:39:30] drwxrwx--x. 2 boincer umatlas      4096 Oct 14 05:20 shared
[2025-10-14 07:39:30] -rw-r--r--. 2 boincer umatlas    569673 Oct 14 05:20 input.tar.gz
[2025-10-14 07:39:30] -rw-r--r--. 1 boincer umatlas         0 Oct 14 05:20 boinc_lockfile
[2025-10-14 07:39:30] -rw-r--r--. 1 boincer umatlas      2550 Oct 14 05:20 pandaJob.out
[2025-10-14 07:39:30] -rw-------. 1 boincer umatlas    979287 Oct 14 05:21 agis_schedconf.cvmfs.json
[2025-10-14 07:39:30] -rw-------. 1 boincer umatlas   1560580 Oct 14 05:21 agis_ddmendpoints.agis.ALL.json
[2025-10-14 07:39:30] drwx------. 5 boincer umatlas      4096 Oct 14 05:21 pilot3
[2025-10-14 07:39:30] -rw-------. 1 boincer umatlas 192220096 Oct 14 07:37 HITS.46676269._075676.pool.root.1
[2025-10-14 07:39:30] -rw-r--r--. 1 boincer umatlas       529 Oct 14 07:37 boinc_task_state.xml
[2025-10-14 07:39:30] -rw-r--r--. 1 boincer umatlas      6936 Oct 14 07:38 init_data.xml
[2025-10-14 07:39:30] -rw-------. 1 boincer umatlas      1045 Oct 14 07:38 memory_monitor_summary.json
[2025-10-14 07:39:30] -rw-------. 1 boincer umatlas    392714 Oct 14 07:38 log.46676269._075676.job.log.tgz.1
[2025-10-14 07:39:30] -rw-------. 1 boincer umatlas        95 Oct 14 07:38 pilot_heartbeat.json
[2025-10-14 07:39:30] -rw-------. 1 boincer umatlas      7800 Oct 14 07:38 heartbeat.json
[2025-10-14 07:39:30] -rw-r--r--. 1 boincer umatlas        27 Oct 14 07:39 wrapper_checkpoint.txt
[2025-10-14 07:39:30] -rw-------. 1 boincer umatlas      4896 Oct 14 07:39 pilotlog.txt
[2025-10-14 07:39:30] -rw-------. 1 boincer umatlas   1149840 Oct 14 07:39 log.46676269._075676.job.log.1
[2025-10-14 07:39:30] -rw-------. 1 boincer umatlas       357 Oct 14 07:39 output.list
[2025-10-14 07:39:30] -rw-r--r--. 1 boincer umatlas       620 Oct 14 07:39 runtime_log
[2025-10-14 07:39:30] -rw-------. 1 boincer umatlas   1566720 Oct 14 07:39 result.tar.gz
[2025-10-14 07:39:30] -rw-r--r--. 1 boincer umatlas      8698 Oct 14 07:39 runtime_log.err
[2025-10-14 07:39:30] -rw-------. 1 boincer umatlas       655 Oct 14 07:39 kczLDmh57R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7OjNDmy2yZYm.diag
[2025-10-14 07:39:30] -rw-r--r--. 1 boincer umatlas      8192 Oct 14 07:39 boinc_mmap_file
[2025-10-14 07:39:30] -rw-r--r--. 1 boincer umatlas     20946 Oct 14 07:39 stderr.txt
[2025-10-14 07:39:31] HITS file was successfully produced:
[2025-10-14 07:39:31] -rw-------. 1 boincer umatlas 192220096 Oct 14 07:37 shared/HITS.pool.root.1
[2025-10-14 07:39:31]  *** Contents of shared directory: ***
[2025-10-14 07:39:31] total 406108
[2025-10-14 07:39:31] -rw-r--r--. 2 boincer umatlas 221468151 Oct 14 05:20 ATLAS.root_0
[2025-10-14 07:39:31] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 05:20 start_atlas.sh
[2025-10-14 07:39:31] -rw-r--r--. 2 boincer umatlas    569673 Oct 14 05:20 input.tar.gz
[2025-10-14 07:39:31] -rw-------. 1 boincer umatlas 192220096 Oct 14 07:37 HITS.pool.root.1
[2025-10-14 07:39:31] -rw-------. 1 boincer umatlas   1566720 Oct 14 07:39 result.tar.gz
07:39:32 (1371189): run_atlas exited; CPU time 34912.361909
07:39:32 (1371189): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN