Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:20:02 (312252): wrapper (7.7.26015): starting
05:20:02 (312252): wrapper: running run_atlas (--nthreads 10)
[2025-10-14 05:20:02] Arguments: --nthreads 10
[2025-10-14 05:20:02] Threads: 10
[2025-10-14 05:20:02] Checking for CVMFS
[2025-10-14 05:20:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 05:20:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 05:20:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 05:20:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 05:20:05] 2.13.2.0 2126255 9772 203756 151692 1 58 28584514 40960001 21977 16776704 0 23826451 99.708 20591511 30557 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-14 05:20:05] CVMFS is ok
[2025-10-14 05:20:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 05:20:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 05:20:05] Further information can be found at the LHC@home message board.
[2025-10-14 05:20:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 05:20:05] Checking for apptainer binary...
[2025-10-14 05:20:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 05:20:05] Running /usr/bin/apptainer --version
[2025-10-14 05:20:05] apptainer version 1.4.3-1.el9
[2025-10-14 05:20:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 05:20:06] c6-8-12-3.aglt2.org
[2025-10-14 05:20:06] apptainer works
[2025-10-14 05:20:06] Set ATHENA_PROC_NUMBER=10
[2025-10-14 05:20:06] Set ATHENA_CORE_NUMBER=10
[2025-10-14 05:20:06] Starting ATLAS job with PandaID=6840537528
[2025-10-14 05:20:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 11:34:35]  *** The last 200 lines of the pilot log: ***
[2025-10-14 11:34:35] 2025-10-14 15:33:53,147 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 11:34:35] 2025-10-14 15:33:53,148 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 11:34:35] 2025-10-14 15:33:53,148 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 11:34:35] 2025-10-14 15:33:53,156 | INFO     | fitting pss+swap vs Time
[2025-10-14 11:34:35] 2025-10-14 15:33:53,157 | INFO     | sum of square deviations: 15078305535.46852
[2025-10-14 11:34:35] 2025-10-14 15:33:53,160 | INFO     | sum of deviations: 87340830414.41376
[2025-10-14 11:34:35] 2025-10-14 15:33:53,160 | INFO     | mean x: 1760444855.569863
[2025-10-14 11:34:35] 2025-10-14 15:33:53,160 | INFO     | mean y: 2229135.4739726027
[2025-10-14 11:34:35] 2025-10-14 15:33:53,160 | INFO     | -- intersect: -10195117988.350368
[2025-10-14 11:34:35] 2025-10-14 15:33:53,160 | INFO     | intersect: -10195117988.350368
[2025-10-14 11:34:35] 2025-10-14 15:33:53,161 | INFO     | chi2: 2.589611893107318
[2025-10-14 11:34:35] 2025-10-14 15:33:53,162 | INFO     | sum of square deviations: 14467157513.822214
[2025-10-14 11:34:35] 2025-10-14 15:33:53,165 | INFO     | sum of deviations: 85968395296.12221
[2025-10-14 11:34:35] 2025-10-14 15:33:53,165 | INFO     | mean x: 1760444703.0777779
[2025-10-14 11:34:35] 2025-10-14 15:33:53,165 | INFO     | mean y: 2228792.6027777777
[2025-10-14 11:34:35] 2025-10-14 15:33:53,165 | INFO     | -- intersect: -10458886736.592167
[2025-10-14 11:34:35] 2025-10-14 15:33:53,165 | INFO     | intersect: -10458886736.592167
[2025-10-14 11:34:35] 2025-10-14 15:33:53,166 | INFO     | chi2: 2.5892456848950167
[2025-10-14 11:34:35] 2025-10-14 15:33:53,166 | INFO     | current chi2=2.5892456848950167 (change=0.014141432284736976 %)
[2025-10-14 11:34:35] 2025-10-14 15:33:53,166 | INFO     | right removable region: 359
[2025-10-14 11:34:35] 2025-10-14 15:33:53,167 | INFO     | sum of square deviations: 14467030633.822214
[2025-10-14 11:34:35] 2025-10-14 15:33:53,170 | INFO     | sum of deviations: 11982780846.077785
[2025-10-14 11:34:35] 2025-10-14 15:33:53,170 | INFO     | mean x: 1760445008.0777779
[2025-10-14 11:34:35] 2025-10-14 15:33:53,170 | INFO     | mean y: 2247882.4972222224
[2025-10-14 11:34:35] 2025-10-14 15:33:53,170 | INFO     | -- intersect: -1455897002.746192
[2025-10-14 11:34:35] 2025-10-14 15:33:53,171 | INFO     | intersect: -1455897002.746192
[2025-10-14 11:34:35] 2025-10-14 15:33:53,171 | INFO     | chi2: 0.40288751746622564
[2025-10-14 11:34:35] 2025-10-14 15:33:53,171 | INFO     | current chi2=0.40288751746622564 (change=84.44216608138935 %)
[2025-10-14 11:34:35] 2025-10-14 15:33:53,172 | INFO     | sum of square deviations: 13872565990.61977
[2025-10-14 11:34:35] 2025-10-14 15:33:53,174 | INFO     | sum of deviations: -4709438077.704214
[2025-10-14 11:34:35] 2025-10-14 15:33:53,175 | INFO     | mean x: 1760445160.5774648
[2025-10-14 11:34:35] 2025-10-14 15:33:53,175 | INFO     | mean y: 2252140.261971831
[2025-10-14 11:34:35] 2025-10-14 15:33:53,175 | INFO     | -- intersect: 599885446.0641977
[2025-10-14 11:34:35] 2025-10-14 15:33:53,175 | INFO     | intersect: 599885446.0641977
[2025-10-14 11:34:35] 2025-10-14 15:33:53,176 | INFO     | chi2: 0.25773145187954427
[2025-10-14 11:34:35] 2025-10-14 15:33:53,176 | INFO     | current chi2=0.25773145187954427 (change=36.02893097794968 %)
[2025-10-14 11:34:35] 2025-10-14 15:33:53,176 | INFO     | sum of square deviations: 13294656959.214258
[2025-10-14 11:34:35] 2025-10-14 15:33:53,179 | INFO     | sum of deviations: -745073868.8571681
[2025-10-14 11:34:35] 2025-10-14 15:33:53,179 | INFO     | mean x: 1760445313.0714285
[2025-10-14 11:34:35] 2025-10-14 15:33:53,179 | INFO     | mean y: 2251092.5142857144
[2025-10-14 11:34:35] 2025-10-14 15:33:53,179 | INFO     | -- intersect: 100911915.75670202
[2025-10-14 11:34:35] 2025-10-14 15:33:53,179 | INFO     | intersect: 100911915.75670202
[2025-10-14 11:34:35] 2025-10-14 15:33:53,180 | INFO     | chi2: 0.25263238832882473
[2025-10-14 11:34:35] 2025-10-14 15:33:53,180 | INFO     | current chi2=0.25263238832882473 (change=1.9784405486927863 %)
[2025-10-14 11:34:35] 2025-10-14 15:33:53,180 | INFO     | left removable region: 30
[2025-10-14 11:34:35] 2025-10-14 15:33:53,181 | INFO     | sum of square deviations: 11042552217.422504
[2025-10-14 11:34:35] 2025-10-14 15:33:53,183 | INFO     | sum of deviations: 16120494279.893616
[2025-10-14 11:34:35] 2025-10-14 15:33:53,184 | INFO     | mean x: 1760445587.550152
[2025-10-14 11:34:35] 2025-10-14 15:33:53,184 | INFO     | mean y: 2245762.1276595746
[2025-10-14 11:34:35] 2025-10-14 15:33:53,184 | INFO     | -- intersect: -2567744622.82977
[2025-10-14 11:34:35] 2025-10-14 15:33:53,184 | INFO     | intersect: -2567744622.82977
[2025-10-14 11:34:35] 2025-10-14 15:33:53,185 | INFO     | chi2: 0.20696334594005783
[2025-10-14 11:34:35] 2025-10-14 15:33:53,185 | INFO     | -- intersect: -2567744622.82977
[2025-10-14 11:34:35] 2025-10-14 15:33:53,185 | INFO     | current memory leak: 1.46 B/s (using 329 data points, chi2=0.21)
[2025-10-14 11:34:35] 2025-10-14 15:33:53,186 | INFO     | could have reported an average CPU frequency of 2878 MHz (16 samples)
[2025-10-14 11:34:35] 2025-10-14 15:33:53,186 | INFO     | ..............................
[2025-10-14 11:34:35] 2025-10-14 15:33:53,186 | INFO     | . Timing measurements:
[2025-10-14 11:34:35] 2025-10-14 15:33:53,186 | INFO     | . get job = 0 s
[2025-10-14 11:34:35] 2025-10-14 15:33:53,186 | INFO     | . initial setup = 5 s
[2025-10-14 11:34:35] 2025-10-14 15:33:53,186 | INFO     | . payload setup = 25 s
[2025-10-14 11:34:35] 2025-10-14 15:33:53,187 | INFO     | . stage-in = 0 s
[2025-10-14 11:34:35] 2025-10-14 15:33:53,187 | INFO     | . payload execution = 22285 s
[2025-10-14 11:34:35] 2025-10-14 15:33:53,187 | INFO     | . stage-out = 3 s
[2025-10-14 11:34:35] 2025-10-14 15:33:53,187 | INFO     | . log creation = 0 s
[2025-10-14 11:34:35] 2025-10-14 15:33:53,187 | INFO     | ..............................
[2025-10-14 11:34:35] 2025-10-14 15:33:53,467 | INFO     | 
[2025-10-14 11:34:35] 2025-10-14 15:33:53,467 | INFO     | job summary report
[2025-10-14 11:34:35] 2025-10-14 15:33:53,467 | INFO     | --------------------------------------------------
[2025-10-14 11:34:35] 2025-10-14 15:33:53,467 | INFO     | PanDA job id: 6840537528
[2025-10-14 11:34:35] 2025-10-14 15:33:53,467 | INFO     | task id: 46676269
[2025-10-14 11:34:35] 2025-10-14 15:33:53,467 | INFO     | errors: (none)
[2025-10-14 11:34:35] 2025-10-14 15:33:53,467 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 11:34:35] 2025-10-14 15:33:53,467 | INFO     | pilot state: finished 
[2025-10-14 11:34:35] 2025-10-14 15:33:53,467 | INFO     | transexitcode: 0
[2025-10-14 11:34:35] 2025-10-14 15:33:53,467 | INFO     | exeerrorcode: 0
[2025-10-14 11:34:35] 2025-10-14 15:33:53,467 | INFO     | exeerrordiag: 
[2025-10-14 11:34:35] 2025-10-14 15:33:53,468 | INFO     | exitcode: 0
[2025-10-14 11:34:35] 2025-10-14 15:33:53,468 | INFO     | exitmsg: OK
[2025-10-14 11:34:35] 2025-10-14 15:33:53,468 | INFO     | cpuconsumptiontime: 42809 s
[2025-10-14 11:34:35] 2025-10-14 15:33:53,468 | INFO     | nevents: 400
[2025-10-14 11:34:35] 2025-10-14 15:33:53,468 | INFO     | neventsw: 0
[2025-10-14 11:34:35] 2025-10-14 15:33:53,468 | INFO     | pid: 334796
[2025-10-14 11:34:35] 2025-10-14 15:33:53,468 | INFO     | pgrp: 334796
[2025-10-14 11:34:35] 2025-10-14 15:33:53,468 | INFO     | corecount: 10
[2025-10-14 11:34:35] 2025-10-14 15:33:53,468 | INFO     | event service: False
[2025-10-14 11:34:35] 2025-10-14 15:33:53,468 | INFO     | sizes: {0: 2348857, 1: 2348857, 12: 2348885, 21: 2349175, 23: 2349203, 22314: 2383612, 22315: 2383739, 22319: 2392857, 22320: 2392913, 22338: 2393107}
[2025-10-14 11:34:35] 2025-10-14 15:33:53,468 | INFO     | --------------------------------------------------
[2025-10-14 11:34:35] 2025-10-14 15:33:53,468 | INFO     | 
[2025-10-14 11:34:35] 2025-10-14 15:33:53,468 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-14 11:34:35] 2025-10-14 15:33:53,567 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 11:34:35] 2025-10-14 15:33:53,567 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 11:34:35] 2025-10-14 15:33:53,567 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 11:34:35] 2025-10-14 15:33:53,568 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 11:34:35] 2025-10-14 15:33:53,568 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 11:34:35] 2025-10-14 15:33:53,568 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 11:34:35] 2025-10-14 15:33:53,568 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 11:34:35] 2025-10-14 15:33:53,568 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 11:34:35] 2025-10-14 15:33:53,568 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 11:34:35] 2025-10-14 15:33:53,568 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 11:34:35] 2025-10-14 15:33:53,568 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 11:34:35] 2025-10-14 15:33:53,568 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 11:34:35] 2025-10-14 15:33:53,568 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 11:34:35] 2025-10-14 15:33:53,568 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 11:34:35] 2025-10-14 15:33:53,568 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 11:34:35] 2025-10-14 15:33:53,568 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 11:34:35] 2025-10-14 15:33:53,568 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 11:34:35] 2025-10-14 15:33:53,568 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 11:34:35] 2025-10-14 15:33:53,570 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 11:34:35] 2025-10-14 15:33:53,570 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 11:34:35] 2025-10-14 15:33:53,570 | INFO     | job 6840537528 has completed (purged errors)
[2025-10-14 11:34:35] 2025-10-14 15:33:53,570 | INFO     | overall cleanup function is called
[2025-10-14 11:34:35] 2025-10-14 15:33:54,585 | INFO     | --- collectZombieJob: --- 10, [334796]
[2025-10-14 11:34:35] 2025-10-14 15:33:54,585 | INFO     | zombie collector waiting for pid 334796
[2025-10-14 11:34:35] 2025-10-14 15:33:54,585 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 11:34:35] 2025-10-14 15:33:54,585 | INFO     | collected zombie processes
[2025-10-14 11:34:35] 2025-10-14 15:33:54,585 | INFO     | will attempt to kill all subprocesses of pid=334796
[2025-10-14 11:34:35] 2025-10-14 15:33:55,195 | INFO     | process IDs to be killed: [334796] (in reverse order)
[2025-10-14 11:34:35] 2025-10-14 15:33:55,334 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 11:34:35] 2025-10-14 15:33:55,334 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 11:34:35] 2025-10-14 15:33:55,356 | INFO     | did not find any defunct processes belonging to 334796
[2025-10-14 11:34:35] 2025-10-14 15:33:55,373 | INFO     | did not find any defunct processes belonging to 334796
[2025-10-14 11:34:35] 2025-10-14 15:33:55,374 | INFO     | ready for new job
[2025-10-14 11:34:35] 2025-10-14 15:33:55,374 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 11:34:35] 2025-10-14 15:33:55,377 | INFO     | ***************************************
[2025-10-14 11:34:35] 2025-10-14 15:33:55,378 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 11:34:35] 2025-10-14 15:33:55,378 | INFO     | ***************************************
[2025-10-14 11:34:35] 2025-10-14 15:33:55,378 | INFO     | 
[2025-10-14 11:34:35] 2025-10-14 15:33:55,394 | INFO     | architecture information:
[2025-10-14 11:34:35] 2025-10-14 15:33:55,406 | INFO     | executing command: cat /etc/os-release
[2025-10-14 11:34:35] 2025-10-14 15:33:55,430 | INFO     | cat /etc/os-release:
[2025-10-14 11:34:35] NAME="CentOS Linux"
[2025-10-14 11:34:35] VERSION="7 (Core)"
[2025-10-14 11:34:35] ID="centos"
[2025-10-14 11:34:35] ID_LIKE="rhel fedora"
[2025-10-14 11:34:35] VERSION_ID="7"
[2025-10-14 11:34:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 11:34:35] ANSI_COLOR="0;31"
[2025-10-14 11:34:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 11:34:35] HOME_URL="https://www.centos.org/"
[2025-10-14 11:34:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 11:34:35] 
[2025-10-14 11:34:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 11:34:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 11:34:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 11:34:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 11:34:35] 
[2025-10-14 11:34:35] 2025-10-14 15:33:55,430 | INFO     | ***************************************
[2025-10-14 11:34:35] 2025-10-14 15:33:55,934 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-14 11:34:35] 2025-10-14 15:33:56,084 | INFO     | sufficient remaining disk space (55877566464 B)
[2025-10-14 11:34:35] 2025-10-14 15:33:56,084 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 11:34:35] 2025-10-14 15:33:56,085 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 11:34:35] 2025-10-14 15:33:56,085 | INFO     | update_server=False
[2025-10-14 11:34:35] 2025-10-14 15:33:56,085 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 11:34:35] 2025-10-14 15:33:56,160 | INFO     | all payload control threads have been joined
[2025-10-14 11:34:35] 2025-10-14 15:33:56,228 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 11:34:35] 2025-10-14 15:33:56,230 | INFO     | aborting loop
[2025-10-14 11:34:35] 2025-10-14 15:33:56,249 | INFO     | all data control threads have been joined
[2025-10-14 11:34:35] 2025-10-14 15:33:57,023 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 11:34:35] 2025-10-14 15:33:57,091 | INFO     | [job] retrieve thread has finished
[2025-10-14 11:34:35] 2025-10-14 15:33:57,157 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 11:34:35] 2025-10-14 15:33:57,167 | INFO     | [payload] control thread has finished
[2025-10-14 11:34:35] 2025-10-14 15:33:57,237 | INFO     | [job] job monitor thread has finished
[2025-10-14 11:34:35] 2025-10-14 15:33:57,254 | INFO     | [data] control thread has finished
[2025-10-14 11:34:35] 2025-10-14 15:33:57,261 | INFO     | all job control threads have been joined
[2025-10-14 11:34:35] 2025-10-14 15:33:57,532 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 11:34:35] 2025-10-14 15:33:57,586 | INFO     | [job] validate thread has finished
[2025-10-14 11:34:35] 2025-10-14 15:33:57,612 | INFO     | [data] copytool_in thread has finished
[2025-10-14 11:34:35] 2025-10-14 15:33:57,953 | INFO     | [payload] validate_post thread has finished
[2025-10-14 11:34:35] 2025-10-14 15:33:58,156 | INFO     | [payload] failed_post thread has finished
[2025-10-14 11:34:35] 2025-10-14 15:33:58,200 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 11:34:35] 2025-10-14 15:33:58,266 | INFO     | [job] control thread has finished
[2025-10-14 11:34:35] 2025-10-14 15:33:58,343 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 11:34:35] 2025-10-14 15:33:58,347 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 11:34:35] 2025-10-14 15:33:58,538 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 11:34:35] 2025-10-14 15:33:59,045 | INFO     | [data] copytool_out thread has finished
[2025-10-14 11:34:35] 2025-10-14 15:33:59,348 | INFO     | [job] queue monitor thread has finished
[2025-10-14 11:34:35] 2025-10-14 15:34:02,562 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 11:34:35] 2025-10-14 15:34:25,700 | INFO     | PID=321227 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-14 11:34:35] 2025-10-14 15:34:25,701 | INFO     | .. there are 30 such processes running
[2025-10-14 11:34:35] 2025-10-14 15:34:25,701 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 11:34:35] 2025-10-14 15:34:25,701 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 11:34:35] 2025-10-14 15:34:25,712 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 11:34:35] 2025-10-14 15:34:28,455 | INFO     | [monitor] cgroup control has ended
[2025-10-14 11:34:35] 2025-10-14 15:34:29,461 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140370856056640)>', '<ExcThread(monitor, started 140369983428352)>']
[2025-10-14 11:34:35] 2025-10-14 15:34:29,765 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 11:34:35] 2025-10-14 15:34:29,765 | INFO     | [monitor] control thread has ended
[2025-10-14 11:34:35] 2025-10-14 15:34:34,487 | INFO     | all workflow threads have been joined
[2025-10-14 11:34:35] 2025-10-14 15:34:34,487 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 11:34:35] 2025-10-14 15:34:34,490 | INFO     | traces error code: 0
[2025-10-14 11:34:35] 2025-10-14 15:34:34,518 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 11:34:35] 2025-10-14 15:34:35,178 [wrapper] ==== pilot stdout END ====
[2025-10-14 11:34:35] 2025-10-14 15:34:35,199 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 11:34:35] 2025-10-14 15:34:35,202 [wrapper] pilotpid: 321227
[2025-10-14 11:34:35] 2025-10-14 15:34:35,205 [wrapper] Pilot exit status: 0
[2025-10-14 11:34:35] 2025-10-14 15:34:35,218 [wrapper] pandaids: 6840537528
[2025-10-14 11:34:35] 2025-10-14 15:34:35,303 [wrapper] cleanup supervisor_pilot 1345746 321228
[2025-10-14 11:34:35] 2025-10-14 15:34:35,327 [wrapper] Test setup, not cleaning
[2025-10-14 11:34:35] 2025-10-14 15:34:35,338 [wrapper] apfmon messages muted
[2025-10-14 11:34:35] 2025-10-14 15:34:35,385 [wrapper] ==== wrapper stdout END ====
[2025-10-14 11:34:35] 2025-10-14 15:34:35,421 [wrapper] ==== wrapper stderr END ====
[2025-10-14 11:34:35]  *** Error codes and diagnostics ***
[2025-10-14 11:34:35]     "exeErrorCode": 0,
[2025-10-14 11:34:35]     "exeErrorDiag": "",
[2025-10-14 11:34:35]     "pilotErrorCode": 0,
[2025-10-14 11:34:35]     "pilotErrorDiag": "",
[2025-10-14 11:34:35]  *** Listing of results directory ***
[2025-10-14 11:34:35] total 415336
[2025-10-14 11:34:35] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 14:20 pilot3.tar.gz
[2025-10-14 11:34:35] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 14:48 queuedata.json
[2025-10-14 11:34:35] -rwx------. 1 boincer umatlas     36292 Oct 12 14:50 runpilot2-wrapper.sh
[2025-10-14 11:34:35] -rw-r--r--. 1 boincer umatlas       100 Oct 14 05:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 11:34:35] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 14 05:20 run_atlas
[2025-10-14 11:34:35] -rw-r--r--. 1 boincer umatlas       105 Oct 14 05:20 job.xml
[2025-10-14 11:34:35] -rw-r--r--. 2 boincer umatlas 222856809 Oct 14 05:20 EVNT.46676267._004426.pool.root.1
[2025-10-14 11:34:35] drwxrwx--x. 2 boincer umatlas      4096 Oct 14 05:20 shared
[2025-10-14 11:34:35] -rw-r--r--. 2 boincer umatlas    569683 Oct 14 05:20 input.tar.gz
[2025-10-14 11:34:35] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 05:20 start_atlas.sh
[2025-10-14 11:34:35] -rw-r--r--. 1 boincer umatlas         0 Oct 14 05:20 boinc_lockfile
[2025-10-14 11:34:35] -rw-r--r--. 1 boincer umatlas      2550 Oct 14 05:20 pandaJob.out
[2025-10-14 11:34:35] -rw-------. 1 boincer umatlas    972837 Oct 14 05:20 agis_schedconf.cvmfs.json
[2025-10-14 11:34:35] drwx------. 5 boincer umatlas      4096 Oct 14 05:20 pilot3
[2025-10-14 11:34:35] -rw-r--r--. 1 boincer umatlas      6843 Oct 14 11:31 init_data.xml
[2025-10-14 11:34:35] -rw-------. 1 boincer umatlas 191680675 Oct 14 11:32 HITS.46676269._086675.pool.root.1
[2025-10-14 11:34:35] -rw-r--r--. 1 boincer umatlas       531 Oct 14 11:32 boinc_task_state.xml
[2025-10-14 11:34:35] -rw-------. 1 boincer umatlas      1041 Oct 14 11:33 memory_monitor_summary.json
[2025-10-14 11:34:35] -rw-------. 1 boincer umatlas   1560740 Oct 14 11:33 agis_ddmendpoints.agis.ALL.json
[2025-10-14 11:34:35] -rw-------. 1 boincer umatlas    609276 Oct 14 11:33 log.46676269._086675.job.log.tgz.1
[2025-10-14 11:34:35] -rw-------. 1 boincer umatlas        95 Oct 14 11:33 pilot_heartbeat.json
[2025-10-14 11:34:35] -rw-------. 1 boincer umatlas      7824 Oct 14 11:33 heartbeat.json
[2025-10-14 11:34:35] -rw-r--r--. 1 boincer umatlas      8192 Oct 14 11:34 boinc_mmap_file
[2025-10-14 11:34:35] -rw-r--r--. 1 boincer umatlas        28 Oct 14 11:34 wrapper_checkpoint.txt
[2025-10-14 11:34:35] -rw-------. 1 boincer umatlas      4823 Oct 14 11:34 pilotlog.txt
[2025-10-14 11:34:35] -rw-------. 1 boincer umatlas   2822043 Oct 14 11:34 log.46676269._086675.job.log.1
[2025-10-14 11:34:35] -rw-------. 1 boincer umatlas       357 Oct 14 11:34 output.list
[2025-10-14 11:34:35] -rw-r--r--. 1 boincer umatlas       620 Oct 14 11:34 runtime_log
[2025-10-14 11:34:35] -rw-------. 1 boincer umatlas   3450880 Oct 14 11:34 result.tar.gz
[2025-10-14 11:34:35] -rw-------. 1 boincer umatlas       657 Oct 14 11:34 sUyNDm1JGS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJAlNDmkMn1qm.diag
[2025-10-14 11:34:35] -rw-r--r--. 1 boincer umatlas      8711 Oct 14 11:34 runtime_log.err
[2025-10-14 11:34:35] -rw-r--r--. 1 boincer umatlas     21020 Oct 14 11:34 stderr.txt
[2025-10-14 11:34:35] HITS file was successfully produced:
[2025-10-14 11:34:35] -rw-------. 1 boincer umatlas 191680675 Oct 14 11:32 shared/HITS.pool.root.1
[2025-10-14 11:34:35]  *** Contents of shared directory: ***
[2025-10-14 11:34:35] total 408784
[2025-10-14 11:34:35] -rw-r--r--. 2 boincer umatlas 222856809 Oct 14 05:20 ATLAS.root_0
[2025-10-14 11:34:35] -rw-r--r--. 2 boincer umatlas    569683 Oct 14 05:20 input.tar.gz
[2025-10-14 11:34:35] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 05:20 start_atlas.sh
[2025-10-14 11:34:35] -rw-------. 1 boincer umatlas 191680675 Oct 14 11:32 HITS.pool.root.1
[2025-10-14 11:34:35] -rw-------. 1 boincer umatlas   3450880 Oct 14 11:34 result.tar.gz
11:34:37 (312252): run_atlas exited; CPU time 43543.797038
11:34:37 (312252): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN