Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:00:24 (2771536): wrapper (7.7.26015): starting
05:00:24 (2771536): wrapper: running run_atlas (--nthreads 9)
[2025-10-14 05:00:24] Arguments: --nthreads 9
[2025-10-14 05:00:24] Threads: 9
[2025-10-14 05:00:24] Checking for CVMFS
[2025-10-14 05:00:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 05:00:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 05:00:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 05:00:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 05:00:25] 2.13.2.0 342865 29934 92640 151690 2 504 40836516 40960001 25772 16776704 0 218822719 99.772 123780871 46333 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-14 05:00:25] CVMFS is ok
[2025-10-14 05:00:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 05:00:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 05:00:25] Further information can be found at the LHC@home message board.
[2025-10-14 05:00:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 05:00:25] Checking for apptainer binary...
[2025-10-14 05:00:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 05:00:25] Running /usr/bin/apptainer --version
[2025-10-14 05:00:25] apptainer version 1.4.3-1.el9
[2025-10-14 05:00:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 05:00:25] c-208-36.aglt2.org
[2025-10-14 05:00:25] apptainer works
[2025-10-14 05:00:25] Set ATHENA_PROC_NUMBER=9
[2025-10-14 05:00:25] Set ATHENA_CORE_NUMBER=9
[2025-10-14 05:00:25] Starting ATLAS job with PandaID=6840223807
[2025-10-14 05:00:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 05:53:56]  *** The last 200 lines of the pilot log: ***
[2025-10-14 05:53:56] 2025-10-14 09:52:51,145 | INFO     | summary of transferred files:
[2025-10-14 05:53:56] 2025-10-14 09:52:51,145 | INFO     |  -- lfn=log.46676269._081911.job.log.tgz.1, status_code=0, status=transferred
[2025-10-14 05:53:56] 2025-10-14 09:52:51,145 | INFO     | stage-out finished correctly
[2025-10-14 05:53:56] 2025-10-14 09:52:51,407 | INFO     | time since job start (3127s) is within the limit (172800.0s)
[2025-10-14 05:53:56] 2025-10-14 09:52:53,224 | WARNING  | process 2785655 can no longer be monitored (due to stat problems) - aborting
[2025-10-14 05:53:56] 2025-10-14 09:52:53,227 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840223807/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 05:53:56] 2025-10-14 09:52:53,228 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840223807/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 05:53:56] 2025-10-14 09:52:53,228 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-14 05:53:56] 2025-10-14 09:52:53,228 | WARNING  | maxPSS not found in memory monitor output
[2025-10-14 05:53:56] 2025-10-14 09:52:53,228 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3965967 B
[2025-10-14 05:53:56] 2025-10-14 09:52:53,228 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16024 B
[2025-10-14 05:53:56] 2025-10-14 09:52:53,228 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-14 05:53:56] 2025-10-14 09:52:53,244 | INFO     | sufficient remaining disk space (173282426880 B)
[2025-10-14 05:53:56] 2025-10-14 09:52:53,245 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-14 05:53:56] 2025-10-14 09:52:53,245 | INFO     | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6840223807: 4255194 B (within 2537553920 B limit)
[2025-10-14 05:53:56] 2025-10-14 09:52:53,245 | INFO     | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6840223807/HITS.46676269._081911.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-14 05:53:56] 2025-10-14 09:52:53,245 | INFO     | total size of present files: 0 B (workdir size: 4255194 B)
[2025-10-14 05:53:56] 2025-10-14 09:52:53,246 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6840223807/HITS.46676269._081911.pool.root.1 since it does not exist
[2025-10-14 05:53:56] 2025-10-14 09:52:53,400 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-14 05:53:56] 2025-10-14 09:52:53,421 | INFO     | time since job start (3129s) is within the limit (172800.0s)
[2025-10-14 05:53:56] 2025-10-14 09:52:53,454 | INFO     | job 6840223807 has state=finished
[2025-10-14 05:53:56] 2025-10-14 09:52:53,454 | INFO     | preparing for final server update for job 6840223807 in state='finished'
[2025-10-14 05:53:56] 2025-10-14 09:52:53,455 | INFO     | this job has now completed (state=finished)
[2025-10-14 05:53:56] 2025-10-14 09:52:53,455 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-14 05:53:56] 2025-10-14 09:52:53,455 | INFO     | log transfer has been attempted: DONE
[2025-10-14 05:53:56] 2025-10-14 09:52:53,455 | INFO     | job 6840223807 has finished - writing final server update
[2025-10-14 05:53:56] 2025-10-14 09:52:53,455 | INFO     | total number of processed events: 400 (read)
[2025-10-14 05:53:56] 2025-10-14 09:52:53,456 | INFO     | executing command: lscpu
[2025-10-14 05:53:56] 2025-10-14 09:52:53,512 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-14 05:53:56] 2025-10-14 09:52:53,657 | INFO     | number of running child processes to parent process 2785655: 1
[2025-10-14 05:53:56] 2025-10-14 09:52:53,658 | INFO     | maximum number of monitored processes: 6
[2025-10-14 05:53:56] 2025-10-14 09:52:55,432 | INFO     | time since job start (3131s) is within the limit (172800.0s)
[2025-10-14 05:53:56] 2025-10-14 09:52:56,161 | INFO     | monitor loop #218: job 0:6840223807 is in state 'finished'
[2025-10-14 05:53:56] 2025-10-14 09:52:56,161 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 05:53:56] 2025-10-14 09:52:57,437 | INFO     | time since job start (3133s) is within the limit (172800.0s)
[2025-10-14 05:53:56] 2025-10-14 09:52:57,540 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-14 05:53:56] 2025-10-14 09:52:57,544 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3778.121062499998
[2025-10-14 05:53:56] 2025-10-14 09:52:57,556 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840223807/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 05:53:56] 2025-10-14 09:52:57,557 | INFO     | extracted standard info from prmon json
[2025-10-14 05:53:56] 2025-10-14 09:52:57,557 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 05:53:56] 2025-10-14 09:52:57,557 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 05:53:56] 2025-10-14 09:52:57,557 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 05:53:56] 2025-10-14 09:52:57,557 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 05:53:56] 2025-10-14 09:52:57,558 | INFO     | fitting pss+swap vs Time
[2025-10-14 05:53:56] 2025-10-14 09:52:57,558 | INFO     | sum of square deviations: 26400495.0
[2025-10-14 05:53:56] 2025-10-14 09:52:57,558 | INFO     | sum of deviations: -1432563497.5000005
[2025-10-14 05:53:56] 2025-10-14 09:52:57,558 | INFO     | mean x: 1760434089.5
[2025-10-14 05:53:56] 2025-10-14 09:52:57,558 | INFO     | mean y: 2628389.1136363638
[2025-10-14 05:53:56] 2025-10-14 09:52:57,558 | INFO     | -- intersect: 95528625775.61523
[2025-10-14 05:53:56] 2025-10-14 09:52:57,558 | INFO     | intersect: 95528625775.61523
[2025-10-14 05:53:56] 2025-10-14 09:52:57,559 | INFO     | chi2: 0.02338933948034153
[2025-10-14 05:53:56] 2025-10-14 09:52:57,559 | INFO     | -- intersect: 95528625775.61523
[2025-10-14 05:53:56] 2025-10-14 09:52:57,559 | INFO     | current memory leak: -54.26 B/s (using 44 data points, chi2=0.02)
[2025-10-14 05:53:56] 2025-10-14 09:52:57,559 | INFO     | could have reported an average CPU frequency of 3786 MHz (5 samples)
[2025-10-14 05:53:56] 2025-10-14 09:52:57,559 | INFO     | ..............................
[2025-10-14 05:53:56] 2025-10-14 09:52:57,559 | INFO     | . Timing measurements:
[2025-10-14 05:53:56] 2025-10-14 09:52:57,559 | INFO     | . get job = 0 s
[2025-10-14 05:53:56] 2025-10-14 09:52:57,559 | INFO     | . initial setup = 2 s
[2025-10-14 05:53:56] 2025-10-14 09:52:57,559 | INFO     | . payload setup = 5 s
[2025-10-14 05:53:56] 2025-10-14 09:52:57,559 | INFO     | . stage-in = 0 s
[2025-10-14 05:53:56] 2025-10-14 09:52:57,559 | INFO     | . payload execution = 3099 s
[2025-10-14 05:53:56] 2025-10-14 09:52:57,559 | INFO     | . stage-out = 0 s
[2025-10-14 05:53:56] 2025-10-14 09:52:57,559 | INFO     | . log creation = 0 s
[2025-10-14 05:53:56] 2025-10-14 09:52:57,559 | INFO     | ..............................
[2025-10-14 05:53:56] 2025-10-14 09:52:57,611 | INFO     | 
[2025-10-14 05:53:56] 2025-10-14 09:52:57,611 | INFO     | job summary report
[2025-10-14 05:53:56] 2025-10-14 09:52:57,611 | INFO     | --------------------------------------------------
[2025-10-14 05:53:56] 2025-10-14 09:52:57,611 | INFO     | PanDA job id: 6840223807
[2025-10-14 05:53:56] 2025-10-14 09:52:57,611 | INFO     | task id: 46676269
[2025-10-14 05:53:56] 2025-10-14 09:52:57,611 | INFO     | errors: (none)
[2025-10-14 05:53:56] 2025-10-14 09:52:57,611 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 05:53:56] 2025-10-14 09:52:57,611 | INFO     | pilot state: finished 
[2025-10-14 05:53:56] 2025-10-14 09:52:57,611 | INFO     | transexitcode: 0
[2025-10-14 05:53:56] 2025-10-14 09:52:57,611 | INFO     | exeerrorcode: 0
[2025-10-14 05:53:56] 2025-10-14 09:52:57,611 | INFO     | exeerrordiag: 
[2025-10-14 05:53:56] 2025-10-14 09:52:57,612 | INFO     | exitcode: 0
[2025-10-14 05:53:56] 2025-10-14 09:52:57,612 | INFO     | exitmsg: OK
[2025-10-14 05:53:56] 2025-10-14 09:52:57,612 | INFO     | cpuconsumptiontime: 23502 s
[2025-10-14 05:53:56] 2025-10-14 09:52:57,612 | INFO     | nevents: 400
[2025-10-14 05:53:56] 2025-10-14 09:52:57,612 | INFO     | neventsw: 0
[2025-10-14 05:53:56] 2025-10-14 09:52:57,612 | INFO     | pid: 2785655
[2025-10-14 05:53:56] 2025-10-14 09:52:57,612 | INFO     | pgrp: 2785655
[2025-10-14 05:53:56] 2025-10-14 09:52:57,612 | INFO     | corecount: 9
[2025-10-14 05:53:56] 2025-10-14 09:52:57,612 | INFO     | event service: False
[2025-10-14 05:53:56] 2025-10-14 09:52:57,612 | INFO     | sizes: {0: 2348029, 1: 2348885, 8: 2349147, 11: 2349175, 3108: 2374755, 3109: 2383936, 3112: 2383964, 3116: 2384190}
[2025-10-14 05:53:56] 2025-10-14 09:52:57,612 | INFO     | --------------------------------------------------
[2025-10-14 05:53:56] 2025-10-14 09:52:57,612 | INFO     | 
[2025-10-14 05:53:56] 2025-10-14 09:52:57,612 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-14 05:53:56] 2025-10-14 09:52:57,631 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 05:53:56] 2025-10-14 09:52:57,631 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 05:53:56] 2025-10-14 09:52:57,631 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 05:53:56] 2025-10-14 09:52:57,631 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 05:53:56] 2025-10-14 09:52:57,632 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 05:53:56] 2025-10-14 09:52:57,632 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 05:53:56] 2025-10-14 09:52:57,632 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 05:53:56] 2025-10-14 09:52:57,632 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 05:53:56] 2025-10-14 09:52:57,632 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 05:53:56] 2025-10-14 09:52:57,632 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 05:53:56] 2025-10-14 09:52:57,632 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 05:53:56] 2025-10-14 09:52:57,632 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 05:53:56] 2025-10-14 09:52:57,632 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 05:53:56] 2025-10-14 09:52:57,632 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 05:53:56] 2025-10-14 09:52:57,632 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 05:53:56] 2025-10-14 09:52:57,632 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 05:53:56] 2025-10-14 09:52:57,632 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 05:53:56] 2025-10-14 09:52:57,632 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 05:53:56] 2025-10-14 09:52:57,632 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 05:53:56] 2025-10-14 09:52:57,632 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 05:53:56] 2025-10-14 09:52:57,632 | INFO     | job 6840223807 has completed (purged errors)
[2025-10-14 05:53:56] 2025-10-14 09:52:57,632 | INFO     | overall cleanup function is called
[2025-10-14 05:53:56] 2025-10-14 09:52:58,639 | INFO     | --- collectZombieJob: --- 10, [2785655]
[2025-10-14 05:53:56] 2025-10-14 09:52:58,640 | INFO     | zombie collector waiting for pid 2785655
[2025-10-14 05:53:56] 2025-10-14 09:52:58,640 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 05:53:56] 2025-10-14 09:52:58,640 | INFO     | collected zombie processes
[2025-10-14 05:53:56] 2025-10-14 09:52:58,640 | INFO     | will attempt to kill all subprocesses of pid=2785655
[2025-10-14 05:53:56] 2025-10-14 09:52:58,987 | INFO     | process IDs to be killed: [2785655] (in reverse order)
[2025-10-14 05:53:56] 2025-10-14 09:52:59,124 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 05:53:56] 2025-10-14 09:52:59,124 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 05:53:56] 2025-10-14 09:52:59,144 | INFO     | did not find any defunct processes belonging to 2785655
[2025-10-14 05:53:56] 2025-10-14 09:52:59,164 | INFO     | did not find any defunct processes belonging to 2785655
[2025-10-14 05:53:56] 2025-10-14 09:52:59,164 | INFO     | ready for new job
[2025-10-14 05:53:56] 2025-10-14 09:52:59,164 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 05:53:56] 2025-10-14 09:52:59,166 | INFO     | ***************************************
[2025-10-14 05:53:56] 2025-10-14 09:52:59,167 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 05:53:56] 2025-10-14 09:52:59,167 | INFO     | ***************************************
[2025-10-14 05:53:56] 2025-10-14 09:52:59,167 | INFO     | 
[2025-10-14 05:53:56] 2025-10-14 09:52:59,172 | INFO     | architecture information:
[2025-10-14 05:53:56] 2025-10-14 09:52:59,172 | INFO     | executing command: cat /etc/os-release
[2025-10-14 05:53:56] 2025-10-14 09:52:59,185 | INFO     | cat /etc/os-release:
[2025-10-14 05:53:56] NAME="CentOS Linux"
[2025-10-14 05:53:56] VERSION="7 (Core)"
[2025-10-14 05:53:56] ID="centos"
[2025-10-14 05:53:56] ID_LIKE="rhel fedora"
[2025-10-14 05:53:56] VERSION_ID="7"
[2025-10-14 05:53:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 05:53:56] ANSI_COLOR="0;31"
[2025-10-14 05:53:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 05:53:56] HOME_URL="https://www.centos.org/"
[2025-10-14 05:53:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 05:53:56] 
[2025-10-14 05:53:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 05:53:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 05:53:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 05:53:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 05:53:56] 
[2025-10-14 05:53:56] 2025-10-14 09:52:59,186 | INFO     | ***************************************
[2025-10-14 05:53:56] 2025-10-14 09:52:59,689 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-14 05:53:56] 2025-10-14 09:52:59,708 | INFO     | sufficient remaining disk space (173287669760 B)
[2025-10-14 05:53:56] 2025-10-14 09:52:59,709 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 05:53:56] 2025-10-14 09:52:59,709 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 05:53:56] 2025-10-14 09:52:59,709 | INFO     | update_server=False
[2025-10-14 05:53:56] 2025-10-14 09:52:59,709 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 05:53:56] 2025-10-14 09:52:59,709 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 05:53:56] 2025-10-14 09:52:59,709 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 05:53:56] 2025-10-14 09:52:59,710 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 05:53:56] 2025-10-14 09:52:59,710 | INFO     | aborting loop
[2025-10-14 05:53:56] 2025-10-14 09:53:00,214 | INFO     | all data control threads have been joined
[2025-10-14 05:53:56] 2025-10-14 09:53:00,431 | INFO     | all job control threads have been joined
[2025-10-14 05:53:56] 2025-10-14 09:53:00,587 | INFO     | all payload control threads have been joined
[2025-10-14 05:53:56] 2025-10-14 09:53:00,710 | INFO     | [job] retrieve thread has finished
[2025-10-14 05:53:56] 2025-10-14 09:53:00,714 | INFO     | [job] job monitor thread has finished
[2025-10-14 05:53:56] 2025-10-14 09:53:00,958 | INFO     | [data] copytool_in thread has finished
[2025-10-14 05:53:56] 2025-10-14 09:53:01,155 | INFO     | [job] validate thread has finished
[2025-10-14 05:53:56] 2025-10-14 09:53:01,205 | INFO     | [payload] validate_post thread has finished
[2025-10-14 05:53:56] 2025-10-14 09:53:01,219 | INFO     | [data] control thread has finished
[2025-10-14 05:53:56] 2025-10-14 09:53:01,391 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 05:53:56] 2025-10-14 09:53:01,421 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 05:53:56] 2025-10-14 09:53:01,437 | INFO     | [job] control thread has finished
[2025-10-14 05:53:56] 2025-10-14 09:53:01,592 | INFO     | [payload] control thread has finished
[2025-10-14 05:53:56] 2025-10-14 09:53:01,714 | INFO     | [data] copytool_out thread has finished
[2025-10-14 05:53:56] 2025-10-14 09:53:01,861 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 05:53:56] 2025-10-14 09:53:02,024 | INFO     | [payload] failed_post thread has finished
[2025-10-14 05:53:56] 2025-10-14 09:53:02,620 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 05:53:56] 2025-10-14 09:53:03,626 | INFO     | [job] queue monitor thread has finished
[2025-10-14 05:53:56] 2025-10-14 09:53:03,717 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 05:53:56] 2025-10-14 09:53:09,958 | INFO     | job.realtimelogging is not enabled
[2025-10-14 05:53:56] 2025-10-14 09:53:10,963 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 05:53:56] 2025-10-14 09:53:30,933 | INFO     | PID=2777562 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 05:53:56] 2025-10-14 09:53:30,933 | INFO     | .. there are 26 such processes running
[2025-10-14 05:53:56] 2025-10-14 09:53:30,933 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 05:53:56] 2025-10-14 09:53:30,933 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 05:53:56] 2025-10-14 09:53:30,933 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 05:53:56] 2025-10-14 09:53:49,111 | INFO     | [monitor] cgroup control has ended
[2025-10-14 05:53:56] 2025-10-14 09:53:50,866 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140525675591488)>', '<ExcThread(monitor, started 140525306877696)>']
[2025-10-14 05:53:56] 2025-10-14 09:53:51,022 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 05:53:56] 2025-10-14 09:53:51,023 | INFO     | [monitor] control thread has ended
[2025-10-14 05:53:56] 2025-10-14 09:53:55,874 | INFO     | all workflow threads have been joined
[2025-10-14 05:53:56] 2025-10-14 09:53:55,875 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 05:53:56] 2025-10-14 09:53:55,875 | INFO     | traces error code: 0
[2025-10-14 05:53:56] 2025-10-14 09:53:55,875 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 05:53:56] 2025-10-14 09:53:56,016 [wrapper] ==== pilot stdout END ====
[2025-10-14 05:53:56] 2025-10-14 09:53:56,019 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 05:53:56] 2025-10-14 09:53:56,021 [wrapper] pilotpid: 2777562
[2025-10-14 05:53:56] 2025-10-14 09:53:56,024 [wrapper] Pilot exit status: 0
[2025-10-14 05:53:56] 2025-10-14 09:53:56,032 [wrapper] pandaids: 6840223807
[2025-10-14 05:53:56] 2025-10-14 09:53:56,129 [wrapper] cleanup supervisor_pilot 3119788 2777563
[2025-10-14 05:53:56] 2025-10-14 09:53:56,132 [wrapper] Test setup, not cleaning
[2025-10-14 05:53:56] 2025-10-14 09:53:56,135 [wrapper] apfmon messages muted
[2025-10-14 05:53:56] 2025-10-14 09:53:56,137 [wrapper] ==== wrapper stdout END ====
[2025-10-14 05:53:56] 2025-10-14 09:53:56,140 [wrapper] ==== wrapper stderr END ====
[2025-10-14 05:53:56]  *** Error codes and diagnostics ***
[2025-10-14 05:53:56]     "exeErrorCode": 0,
[2025-10-14 05:53:56]     "exeErrorDiag": "",
[2025-10-14 05:53:56]     "pilotErrorCode": 0,
[2025-10-14 05:53:56]     "pilotErrorDiag": "",
[2025-10-14 05:53:56]  *** Listing of results directory ***
[2025-10-14 05:53:56] total 403348
[2025-10-14 05:53:56] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-14 05:53:56] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 11:15 queuedata.json
[2025-10-14 05:53:56] -rwx------. 1 boincer umatlas     36292 Oct 12 11:15 runpilot2-wrapper.sh
[2025-10-14 05:53:56] -rw-r--r--. 1 boincer umatlas       100 Oct 14 05:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 05:53:56] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 14 05:00 run_atlas
[2025-10-14 05:53:56] -rw-r--r--. 1 boincer umatlas       105 Oct 14 05:00 job.xml
[2025-10-14 05:53:56] -rw-r--r--. 2 boincer umatlas 219948169 Oct 14 05:00 EVNT.46676267._004558.pool.root.1
[2025-10-14 05:53:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 05:00 start_atlas.sh
[2025-10-14 05:53:56] drwxrwx--x. 2 boincer umatlas      4096 Oct 14 05:00 shared
[2025-10-14 05:53:56] -rw-r--r--. 2 boincer umatlas    569680 Oct 14 05:00 input.tar.gz
[2025-10-14 05:53:56] -rw-r--r--. 1 boincer umatlas         0 Oct 14 05:00 boinc_lockfile
[2025-10-14 05:53:56] -rw-r--r--. 1 boincer umatlas      2550 Oct 14 05:00 pandaJob.out
[2025-10-14 05:53:56] -rw-------. 1 boincer umatlas    972799 Oct 14 05:00 agis_schedconf.cvmfs.json
[2025-10-14 05:53:56] -rw-------. 1 boincer umatlas   1560580 Oct 14 05:00 agis_ddmendpoints.agis.ALL.json
[2025-10-14 05:53:56] drwx------. 5 boincer umatlas      4096 Oct 14 05:00 pilot3
[2025-10-14 05:53:56] -rw-r--r--. 1 boincer umatlas      7174 Oct 14 05:49 init_data.xml
[2025-10-14 05:53:56] -rw-------. 1 boincer umatlas 187559059 Oct 14 05:52 HITS.46676269._081911.pool.root.1
[2025-10-14 05:53:56] -rw-r--r--. 1 boincer umatlas       529 Oct 14 05:52 boinc_task_state.xml
[2025-10-14 05:53:56] -rw-------. 1 boincer umatlas        95 Oct 14 05:52 pilot_heartbeat.json
[2025-10-14 05:53:56] -rw-------. 1 boincer umatlas      1036 Oct 14 05:52 memory_monitor_summary.json
[2025-10-14 05:53:56] -rw-------. 1 boincer umatlas    335409 Oct 14 05:52 log.46676269._081911.job.log.tgz.1
[2025-10-14 05:53:56] -rw-------. 1 boincer umatlas      7777 Oct 14 05:52 heartbeat.json
[2025-10-14 05:53:56] -rw-r--r--. 1 boincer umatlas      8192 Oct 14 05:53 boinc_mmap_file
[2025-10-14 05:53:56] -rw-r--r--. 1 boincer umatlas        27 Oct 14 05:53 wrapper_checkpoint.txt
[2025-10-14 05:53:56] -rw-------. 1 boincer umatlas      4897 Oct 14 05:53 pilotlog.txt
[2025-10-14 05:53:56] -rw-------. 1 boincer umatlas    471407 Oct 14 05:53 log.46676269._081911.job.log.1
[2025-10-14 05:53:56] -rw-------. 1 boincer umatlas       357 Oct 14 05:53 output.list
[2025-10-14 05:53:56] -rw-r--r--. 1 boincer umatlas       620 Oct 14 05:53 runtime_log
[2025-10-14 05:53:56] -rw-------. 1 boincer umatlas    829440 Oct 14 05:53 result.tar.gz
[2025-10-14 05:53:56] -rw-r--r--. 1 boincer umatlas      8703 Oct 14 05:53 runtime_log.err
[2025-10-14 05:53:56] -rw-------. 1 boincer umatlas       652 Oct 14 05:53 KjVKDmQyCS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm6EUMDmxtp58n.diag
[2025-10-14 05:53:56] -rw-r--r--. 1 boincer umatlas     22368 Oct 14 05:53 stderr.txt
[2025-10-14 05:53:56] HITS file was successfully produced:
[2025-10-14 05:53:56] -rw-------. 1 boincer umatlas 187559059 Oct 14 05:52 shared/HITS.pool.root.1
[2025-10-14 05:53:56]  *** Contents of shared directory: ***
[2025-10-14 05:53:56] total 399356
[2025-10-14 05:53:56] -rw-r--r--. 2 boincer umatlas 219948169 Oct 14 05:00 ATLAS.root_0
[2025-10-14 05:53:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 05:00 start_atlas.sh
[2025-10-14 05:53:56] -rw-r--r--. 2 boincer umatlas    569680 Oct 14 05:00 input.tar.gz
[2025-10-14 05:53:56] -rw-------. 1 boincer umatlas 187559059 Oct 14 05:52 HITS.pool.root.1
[2025-10-14 05:53:56] -rw-------. 1 boincer umatlas    829440 Oct 14 05:53 result.tar.gz
05:53:57 (2771536): run_atlas exited; CPU time 23584.568109
05:53:57 (2771536): called boinc_finish(0)

</stderr_txt>
]]>

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