Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:58:15 (28686): wrapper (7.7.26015): starting
04:58:15 (28686): wrapper: running run_atlas (--nthreads 8)
[2025-10-14 04:58:15] Arguments: --nthreads 8
[2025-10-14 04:58:15] Threads: 8
[2025-10-14 04:58:15] Checking for CVMFS
[2025-10-14 04:58:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 04:58:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 04:58:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 04:58:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 04:58:16] 2.11.2.0 17609 55537 127348 151690 2 1 15007482 18432001 1 130560 0 49551202 99.976 2351528 32155 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-14 04:58:16] CVMFS is ok
[2025-10-14 04:58:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 04:58:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 04:58:16] Further information can be found at the LHC@home message board.
[2025-10-14 04:58:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 04:58:16] Checking for apptainer binary...
[2025-10-14 04:58:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 04:58:16] Running /usr/bin/apptainer --version
[2025-10-14 04:58:16] apptainer version 1.3.2-1.el7
[2025-10-14 04:58:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 04:58:17] c-206-32.aglt2.org
[2025-10-14 04:58:17] apptainer works
[2025-10-14 04:58:17] Set ATHENA_PROC_NUMBER=8
[2025-10-14 04:58:17] Set ATHENA_CORE_NUMBER=8
[2025-10-14 04:58:17] Starting ATLAS job with PandaID=6841068608
[2025-10-14 04:58:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 06:43:48]  *** The last 200 lines of the pilot log: ***
[2025-10-14 06:43:48] 2025-10-14 10:42:59,824 | INFO     | fitting pss+swap vs Time
[2025-10-14 06:43:48] 2025-10-14 10:42:59,825 | INFO     | sum of square deviations: 338804492.0
[2025-10-14 06:43:48] 2025-10-14 10:42:59,825 | INFO     | sum of deviations: -1299924334.999999
[2025-10-14 06:43:48] 2025-10-14 10:42:59,825 | INFO     | mean x: 1760435453.0
[2025-10-14 06:43:48] 2025-10-14 10:42:59,825 | INFO     | mean y: 2471546.155339806
[2025-10-14 06:43:48] 2025-10-14 10:42:59,825 | INFO     | -- intersect: 6756906447.660268
[2025-10-14 06:43:48] 2025-10-14 10:42:59,825 | INFO     | intersect: 6756906447.660268
[2025-10-14 06:43:48] 2025-10-14 10:42:59,826 | INFO     | chi2: 2.2271507308334852
[2025-10-14 06:43:48] 2025-10-14 10:42:59,826 | INFO     | sum of square deviations: 291817564.5
[2025-10-14 06:43:48] 2025-10-14 10:42:59,826 | INFO     | sum of deviations: 5580427925.000001
[2025-10-14 06:43:48] 2025-10-14 10:42:59,826 | INFO     | mean x: 1760435300.5
[2025-10-14 06:43:48] 2025-10-14 10:42:59,826 | INFO     | mean y: 2492993.1428571427
[2025-10-14 06:43:48] 2025-10-14 10:42:59,827 | INFO     | -- intersect: -33662315113.5877
[2025-10-14 06:43:48] 2025-10-14 10:42:59,827 | INFO     | intersect: -33662315113.5877
[2025-10-14 06:43:48] 2025-10-14 10:42:59,827 | INFO     | chi2: 1.4231298676172182
[2025-10-14 06:43:48] 2025-10-14 10:42:59,827 | INFO     | current chi2=1.4231298676172182 (change=36.100873285544154 %)
[2025-10-14 06:43:48] 2025-10-14 10:42:59,827 | INFO     | sum of square deviations: 249388862.0
[2025-10-14 06:43:48] 2025-10-14 10:42:59,828 | INFO     | sum of deviations: 5427329088.0
[2025-10-14 06:43:48] 2025-10-14 10:42:59,828 | INFO     | mean x: 1760435148.0
[2025-10-14 06:43:48] 2025-10-14 10:42:59,828 | INFO     | mean y: 2492445.2795698927
[2025-10-14 06:43:48] 2025-10-14 10:42:59,828 | INFO     | -- intersect: -38309005548.876976
[2025-10-14 06:43:48] 2025-10-14 10:42:59,828 | INFO     | intersect: -38309005548.876976
[2025-10-14 06:43:48] 2025-10-14 10:42:59,828 | INFO     | chi2: 1.426557592360821
[2025-10-14 06:43:48] 2025-10-14 10:42:59,829 | INFO     | current chi2=1.426557592360821 (change=-0.2408581831918039 %)
[2025-10-14 06:43:48] 2025-10-14 10:42:59,829 | INFO     | right removable region: 92
[2025-10-14 06:43:48] 2025-10-14 10:42:59,829 | INFO     | sum of square deviations: 291817564.5
[2025-10-14 06:43:48] 2025-10-14 10:42:59,829 | INFO     | sum of deviations: -14593012310.0
[2025-10-14 06:43:48] 2025-10-14 10:42:59,829 | INFO     | mean x: 1760435605.5
[2025-10-14 06:43:48] 2025-10-14 10:42:59,829 | INFO     | mean y: 2513576.102040816
[2025-10-14 06:43:48] 2025-10-14 10:42:59,830 | INFO     | -- intersect: 88037168056.346
[2025-10-14 06:43:48] 2025-10-14 10:42:59,830 | INFO     | intersect: 88037168056.346
[2025-10-14 06:43:48] 2025-10-14 10:42:59,830 | INFO     | chi2: 0.9272620805887206
[2025-10-14 06:43:48] 2025-10-14 10:42:59,830 | INFO     | current chi2=0.9272620805887206 (change=58.365544471177145 %)
[2025-10-14 06:43:48] 2025-10-14 10:42:59,830 | INFO     | sum of square deviations: 249388862.0
[2025-10-14 06:43:48] 2025-10-14 10:42:59,831 | INFO     | sum of deviations: -11297863558.0
[2025-10-14 06:43:48] 2025-10-14 10:42:59,831 | INFO     | mean x: 1760435758.0
[2025-10-14 06:43:48] 2025-10-14 10:42:59,831 | INFO     | mean y: 2501692.3978494625
[2025-10-14 06:43:48] 2025-10-14 10:42:59,831 | INFO     | -- intersect: 79754110633.57143
[2025-10-14 06:43:48] 2025-10-14 10:42:59,831 | INFO     | intersect: 79754110633.57143
[2025-10-14 06:43:48] 2025-10-14 10:42:59,831 | INFO     | chi2: 0.9158240691219525
[2025-10-14 06:43:48] 2025-10-14 10:42:59,831 | INFO     | current chi2=0.9158240691219525 (change=1.23352520352241 %)
[2025-10-14 06:43:48] 2025-10-14 10:42:59,831 | INFO     | left removable region: 20
[2025-10-14 06:43:48] 2025-10-14 10:42:59,832 | INFO     | sum of square deviations: 115715658.0
[2025-10-14 06:43:48] 2025-10-14 10:42:59,832 | INFO     | sum of deviations: 497381098.5
[2025-10-14 06:43:48] 2025-10-14 10:42:59,832 | INFO     | mean x: 1760435727.5
[2025-10-14 06:43:48] 2025-10-14 10:42:59,832 | INFO     | mean y: 2503524.347222222
[2025-10-14 06:43:48] 2025-10-14 10:42:59,832 | INFO     | -- intersect: -7564384752.627331
[2025-10-14 06:43:48] 2025-10-14 10:42:59,832 | INFO     | intersect: -7564384752.627331
[2025-10-14 06:43:48] 2025-10-14 10:42:59,832 | INFO     | chi2: 0.0005782406197185468
[2025-10-14 06:43:48] 2025-10-14 10:42:59,833 | INFO     | -- intersect: -7564384752.627331
[2025-10-14 06:43:48] 2025-10-14 10:42:59,833 | INFO     | current memory leak: 4.30 B/s (using 72 data points, chi2=0.00)
[2025-10-14 06:43:48] 2025-10-14 10:42:59,833 | INFO     | could have reported an average CPU frequency of 1947 MHz (7 samples)
[2025-10-14 06:43:48] 2025-10-14 10:42:59,833 | INFO     | ..............................
[2025-10-14 06:43:48] 2025-10-14 10:42:59,833 | INFO     | . Timing measurements:
[2025-10-14 06:43:48] 2025-10-14 10:42:59,833 | INFO     | . get job = 0 s
[2025-10-14 06:43:48] 2025-10-14 10:42:59,833 | INFO     | . initial setup = 2 s
[2025-10-14 06:43:48] 2025-10-14 10:42:59,834 | INFO     | . payload setup = 7 s
[2025-10-14 06:43:48] 2025-10-14 10:42:59,834 | INFO     | . stage-in = 0 s
[2025-10-14 06:43:48] 2025-10-14 10:42:59,834 | INFO     | . payload execution = 6231 s
[2025-10-14 06:43:48] 2025-10-14 10:42:59,834 | INFO     | . stage-out = 0 s
[2025-10-14 06:43:48] 2025-10-14 10:42:59,834 | INFO     | . log creation = 0 s
[2025-10-14 06:43:48] 2025-10-14 10:42:59,834 | INFO     | ..............................
[2025-10-14 06:43:48] 2025-10-14 10:42:59,909 | INFO     | 
[2025-10-14 06:43:48] 2025-10-14 10:42:59,909 | INFO     | job summary report
[2025-10-14 06:43:48] 2025-10-14 10:42:59,909 | INFO     | --------------------------------------------------
[2025-10-14 06:43:48] 2025-10-14 10:42:59,909 | INFO     | PanDA job id: 6841068608
[2025-10-14 06:43:48] 2025-10-14 10:42:59,909 | INFO     | task id: 46676269
[2025-10-14 06:43:48] 2025-10-14 10:42:59,909 | INFO     | errors: (none)
[2025-10-14 06:43:48] 2025-10-14 10:42:59,910 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 06:43:48] 2025-10-14 10:42:59,910 | INFO     | pilot state: finished 
[2025-10-14 06:43:48] 2025-10-14 10:42:59,910 | INFO     | transexitcode: 0
[2025-10-14 06:43:48] 2025-10-14 10:42:59,910 | INFO     | exeerrorcode: 0
[2025-10-14 06:43:48] 2025-10-14 10:42:59,910 | INFO     | exeerrordiag: 
[2025-10-14 06:43:48] 2025-10-14 10:42:59,910 | INFO     | exitcode: 0
[2025-10-14 06:43:48] 2025-10-14 10:42:59,910 | INFO     | exitmsg: OK
[2025-10-14 06:43:48] 2025-10-14 10:42:59,910 | INFO     | cpuconsumptiontime: 46775 s
[2025-10-14 06:43:48] 2025-10-14 10:42:59,910 | INFO     | nevents: 400
[2025-10-14 06:43:48] 2025-10-14 10:42:59,910 | INFO     | neventsw: 0
[2025-10-14 06:43:48] 2025-10-14 10:42:59,911 | INFO     | pid: 6835
[2025-10-14 06:43:48] 2025-10-14 10:42:59,911 | INFO     | pgrp: 6835
[2025-10-14 06:43:48] 2025-10-14 10:42:59,911 | INFO     | corecount: 8
[2025-10-14 06:43:48] 2025-10-14 10:42:59,911 | INFO     | event service: False
[2025-10-14 06:43:48] 2025-10-14 10:42:59,911 | INFO     | sizes: {0: 2348807, 1: 2348807, 5: 2349097, 11: 2349153, 6242: 2376126, 6243: 2385124, 6245: 2385308, 6250: 2385502}
[2025-10-14 06:43:48] 2025-10-14 10:42:59,911 | INFO     | --------------------------------------------------
[2025-10-14 06:43:48] 2025-10-14 10:42:59,911 | INFO     | 
[2025-10-14 06:43:48] 2025-10-14 10:42:59,911 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-14 06:43:48] 2025-10-14 10:42:59,926 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 06:43:48] 2025-10-14 10:42:59,926 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 06:43:48] 2025-10-14 10:42:59,926 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 06:43:48] 2025-10-14 10:42:59,926 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 06:43:48] 2025-10-14 10:42:59,927 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 06:43:48] 2025-10-14 10:42:59,927 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 06:43:48] 2025-10-14 10:42:59,927 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 06:43:48] 2025-10-14 10:42:59,927 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 06:43:48] 2025-10-14 10:42:59,927 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 06:43:48] 2025-10-14 10:42:59,927 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 06:43:48] 2025-10-14 10:42:59,927 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 06:43:48] 2025-10-14 10:42:59,927 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 06:43:48] 2025-10-14 10:42:59,927 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 06:43:48] 2025-10-14 10:42:59,927 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 06:43:48] 2025-10-14 10:42:59,928 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 06:43:48] 2025-10-14 10:42:59,928 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 06:43:48] 2025-10-14 10:42:59,928 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 06:43:48] 2025-10-14 10:42:59,928 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 06:43:48] 2025-10-14 10:42:59,928 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 06:43:48] 2025-10-14 10:42:59,928 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 06:43:48] 2025-10-14 10:42:59,928 | INFO     | job 6841068608 has completed (purged errors)
[2025-10-14 06:43:48] 2025-10-14 10:42:59,928 | INFO     | overall cleanup function is called
[2025-10-14 06:43:48] 2025-10-14 10:43:00,934 | INFO     | --- collectZombieJob: --- 10, [6835]
[2025-10-14 06:43:48] 2025-10-14 10:43:00,934 | INFO     | zombie collector waiting for pid 6835
[2025-10-14 06:43:48] 2025-10-14 10:43:00,934 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 06:43:48] 2025-10-14 10:43:00,934 | INFO     | collected zombie processes
[2025-10-14 06:43:48] 2025-10-14 10:43:00,934 | INFO     | will attempt to kill all subprocesses of pid=6835
[2025-10-14 06:43:48] 2025-10-14 10:43:01,031 | INFO     | process IDs to be killed: [6835] (in reverse order)
[2025-10-14 06:43:48] 2025-10-14 10:43:01,068 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 06:43:48] 2025-10-14 10:43:01,068 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 06:43:48] 2025-10-14 10:43:01,070 | INFO     | did not find any defunct processes belonging to 6835
[2025-10-14 06:43:48] 2025-10-14 10:43:01,073 | INFO     | did not find any defunct processes belonging to 6835
[2025-10-14 06:43:48] 2025-10-14 10:43:01,073 | INFO     | ready for new job
[2025-10-14 06:43:48] 2025-10-14 10:43:01,073 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 06:43:48] 2025-10-14 10:43:01,074 | INFO     | ***************************************
[2025-10-14 06:43:48] 2025-10-14 10:43:01,074 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 06:43:48] 2025-10-14 10:43:01,074 | INFO     | ***************************************
[2025-10-14 06:43:48] 2025-10-14 10:43:01,074 | INFO     | 
[2025-10-14 06:43:48] 2025-10-14 10:43:01,075 | INFO     | architecture information:
[2025-10-14 06:43:48] 2025-10-14 10:43:01,076 | INFO     | executing command: cat /etc/os-release
[2025-10-14 06:43:48] 2025-10-14 10:43:01,086 | INFO     | cat /etc/os-release:
[2025-10-14 06:43:48] NAME="CentOS Linux"
[2025-10-14 06:43:48] VERSION="7 (Core)"
[2025-10-14 06:43:48] ID="centos"
[2025-10-14 06:43:48] ID_LIKE="rhel fedora"
[2025-10-14 06:43:48] VERSION_ID="7"
[2025-10-14 06:43:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 06:43:48] ANSI_COLOR="0;31"
[2025-10-14 06:43:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 06:43:48] HOME_URL="https://www.centos.org/"
[2025-10-14 06:43:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 06:43:48] 
[2025-10-14 06:43:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 06:43:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 06:43:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 06:43:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 06:43:48] 
[2025-10-14 06:43:48] 2025-10-14 10:43:01,086 | INFO     | ***************************************
[2025-10-14 06:43:48] 2025-10-14 10:43:01,589 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-14 06:43:48] 2025-10-14 10:43:01,601 | INFO     | sufficient remaining disk space (28721545216 B)
[2025-10-14 06:43:48] 2025-10-14 10:43:01,601 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 06:43:48] 2025-10-14 10:43:01,601 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 06:43:48] 2025-10-14 10:43:01,601 | INFO     | update_server=False
[2025-10-14 06:43:48] 2025-10-14 10:43:01,601 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 06:43:48] 2025-10-14 10:43:01,601 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 06:43:48] 2025-10-14 10:43:01,602 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 06:43:48] 2025-10-14 10:43:01,602 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 06:43:48] 2025-10-14 10:43:01,638 | INFO     | all payload control threads have been joined
[2025-10-14 06:43:48] 2025-10-14 10:43:01,838 | INFO     | all data control threads have been joined
[2025-10-14 06:43:48] 2025-10-14 10:43:01,846 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-14 06:43:48] 2025-10-14 10:43:01,846 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-14 06:43:48] 2025-10-14 10:43:01,846 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 06:43:48] 2025-10-14 10:43:01,846 | INFO     | will abort loop
[2025-10-14 06:43:48] 2025-10-14 10:43:02,605 | INFO     | [job] retrieve thread has finished
[2025-10-14 06:43:48] 2025-10-14 10:43:02,607 | INFO     | [job] queue monitor thread has finished
[2025-10-14 06:43:48] 2025-10-14 10:43:02,644 | INFO     | [payload] control thread has finished
[2025-10-14 06:43:48] 2025-10-14 10:43:02,656 | INFO     | all job control threads have been joined
[2025-10-14 06:43:48] 2025-10-14 10:43:02,752 | INFO     | [payload] validate_post thread has finished
[2025-10-14 06:43:48] 2025-10-14 10:43:02,843 | INFO     | [data] control thread has finished
[2025-10-14 06:43:48] 2025-10-14 10:43:02,852 | INFO     | [job] job monitor thread has finished
[2025-10-14 06:43:48] 2025-10-14 10:43:02,886 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 06:43:48] 2025-10-14 10:43:03,336 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 06:43:48] 2025-10-14 10:43:03,587 | INFO     | [job] validate thread has finished
[2025-10-14 06:43:48] 2025-10-14 10:43:03,608 | INFO     | [data] copytool_out thread has finished
[2025-10-14 06:43:48] 2025-10-14 10:43:03,661 | INFO     | [job] control thread has finished
[2025-10-14 06:43:48] 2025-10-14 10:43:03,662 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 06:43:48] 2025-10-14 10:43:03,682 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 06:43:48] 2025-10-14 10:43:03,926 | INFO     | [payload] failed_post thread has finished
[2025-10-14 06:43:48] 2025-10-14 10:43:03,944 | INFO     | [data] copytool_in thread has finished
[2025-10-14 06:43:48] 2025-10-14 10:43:05,608 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 06:43:48] 2025-10-14 10:43:30,119 [wrapper] supervise_pilot (15 min periods counter: 8)
[2025-10-14 06:43:48] 2025-10-14 10:43:32,737 | INFO     | PID=32754 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-14 06:43:48] 2025-10-14 10:43:32,738 | INFO     | .. there are 2 such processes running
[2025-10-14 06:43:48] 2025-10-14 10:43:32,738 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 06:43:48] 2025-10-14 10:43:32,738 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 06:43:48] 2025-10-14 10:43:32,738 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 06:43:48] 2025-10-14 10:43:41,641 | INFO     | [monitor] cgroup control has ended
[2025-10-14 06:43:48] 2025-10-14 10:43:43,626 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140448642742080)>', '<ExcThread(monitor, started 140448341403392)>']
[2025-10-14 06:43:48] 2025-10-14 10:43:43,784 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 06:43:48] 2025-10-14 10:43:43,784 | INFO     | [monitor] control thread has ended
[2025-10-14 06:43:48] 2025-10-14 10:43:48,651 | INFO     | all workflow threads have been joined
[2025-10-14 06:43:48] 2025-10-14 10:43:48,652 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 06:43:48] 2025-10-14 10:43:48,652 | INFO     | traces error code: 0
[2025-10-14 06:43:48] 2025-10-14 10:43:48,652 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 06:43:48] 2025-10-14 10:43:48,741 [wrapper] ==== pilot stdout END ====
[2025-10-14 06:43:48] 2025-10-14 10:43:48,743 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 06:43:48] 2025-10-14 10:43:48,745 [wrapper] pilotpid: 32754
[2025-10-14 06:43:48] 2025-10-14 10:43:48,747 [wrapper] Pilot exit status: 0
[2025-10-14 06:43:48] 2025-10-14 10:43:48,755 [wrapper] pandaids: 6841068608
[2025-10-14 06:43:48] 2025-10-14 10:43:48,780 [wrapper] cleanup supervisor_pilot 32720 32755
[2025-10-14 06:43:48] 2025-10-14 10:43:48,783 [wrapper] Test setup, not cleaning
[2025-10-14 06:43:48] 2025-10-14 10:43:48,785 [wrapper] apfmon messages muted
[2025-10-14 06:43:48] 2025-10-14 10:43:48,787 [wrapper] ==== wrapper stdout END ====
[2025-10-14 06:43:48] 2025-10-14 10:43:48,789 [wrapper] ==== wrapper stderr END ====
[2025-10-14 06:43:48]  *** Error codes and diagnostics ***
[2025-10-14 06:43:48]     "exeErrorCode": 0,
[2025-10-14 06:43:48]     "exeErrorDiag": "",
[2025-10-14 06:43:48]     "pilotErrorCode": 0,
[2025-10-14 06:43:48]     "pilotErrorDiag": "",
[2025-10-14 06:43:48]  *** Listing of results directory ***
[2025-10-14 06:43:48] total 412912
[2025-10-14 06:43:48] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 20:02 pilot3.tar.gz
[2025-10-14 06:43:48] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 20:06 queuedata.json
[2025-10-14 06:43:48] -rwx------ 1 boincer umatlas     36292 Oct 12 20:08 runpilot2-wrapper.sh
[2025-10-14 06:43:48] -rw-r--r-- 1 boincer umatlas       100 Oct 14 04:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 06:43:48] -rwxr-xr-x 1 boincer umatlas      7986 Oct 14 04:58 run_atlas
[2025-10-14 06:43:48] -rw-r--r-- 1 boincer umatlas       105 Oct 14 04:58 job.xml
[2025-10-14 06:43:48] -rw-r--r-- 2 boincer umatlas 224823692 Oct 14 04:58 EVNT.46676267._001671.pool.root.1
[2025-10-14 06:43:48] -rw-r--r-- 2 boincer umatlas     15120 Oct 14 04:58 start_atlas.sh
[2025-10-14 06:43:48] drwxrwx--x 2 boincer umatlas      4096 Oct 14 04:58 shared
[2025-10-14 06:43:48] -rw-r--r-- 2 boincer umatlas    569687 Oct 14 04:58 input.tar.gz
[2025-10-14 06:43:48] -rw-r--r-- 1 boincer umatlas         0 Oct 14 04:58 boinc_lockfile
[2025-10-14 06:43:48] -rw-r--r-- 1 boincer umatlas      2550 Oct 14 04:58 pandaJob.out
[2025-10-14 06:43:48] -rw------- 1 boincer umatlas    972799 Oct 14 04:58 agis_schedconf.cvmfs.json
[2025-10-14 06:43:48] -rw------- 1 boincer umatlas   1560580 Oct 14 04:58 agis_ddmendpoints.agis.ALL.json
[2025-10-14 06:43:48] drwx------ 5 boincer umatlas      4096 Oct 14 04:58 pilot3
[2025-10-14 06:43:48] -rw-r--r-- 1 boincer umatlas      5949 Oct 14 06:38 init_data.xml
[2025-10-14 06:43:48] -rw------- 1 boincer umatlas 191574756 Oct 14 06:42 HITS.46676269._092844.pool.root.1
[2025-10-14 06:43:48] -rw-r--r-- 1 boincer umatlas       529 Oct 14 06:42 boinc_task_state.xml
[2025-10-14 06:43:48] -rw------- 1 boincer umatlas      1049 Oct 14 06:42 memory_monitor_summary.json
[2025-10-14 06:43:48] -rw------- 1 boincer umatlas    355485 Oct 14 06:42 log.46676269._092844.job.log.tgz.1
[2025-10-14 06:43:48] -rw------- 1 boincer umatlas      7850 Oct 14 06:42 heartbeat.json
[2025-10-14 06:43:48] -rw------- 1 boincer umatlas        95 Oct 14 06:43 pilot_heartbeat.json
[2025-10-14 06:43:48] -rw-r--r-- 1 boincer umatlas      8192 Oct 14 06:43 boinc_mmap_file
[2025-10-14 06:43:48] -rw-r--r-- 1 boincer umatlas        27 Oct 14 06:43 wrapper_checkpoint.txt
[2025-10-14 06:43:48] -rw------- 1 boincer umatlas      5007 Oct 14 06:43 pilotlog.txt
[2025-10-14 06:43:48] -rw------- 1 boincer umatlas    902815 Oct 14 06:43 log.46676269._092844.job.log.1
[2025-10-14 06:43:48] -rw------- 1 boincer umatlas       357 Oct 14 06:43 output.list
[2025-10-14 06:43:48] -rw-r--r-- 1 boincer umatlas       620 Oct 14 06:43 runtime_log
[2025-10-14 06:43:48] -rw------- 1 boincer umatlas   1280000 Oct 14 06:43 result.tar.gz
[2025-10-14 06:43:48] -rw-r--r-- 1 boincer umatlas      8703 Oct 14 06:43 runtime_log.err
[2025-10-14 06:43:48] -rw------- 1 boincer umatlas       659 Oct 14 06:43 G0LODmcILS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmb9lNDmBnOyBo.diag
[2025-10-14 06:43:48] -rw-r--r-- 1 boincer umatlas     20860 Oct 14 06:43 stderr.txt
[2025-10-14 06:43:48] HITS file was successfully produced:
[2025-10-14 06:43:48] -rw------- 1 boincer umatlas 191574756 Oct 14 06:42 shared/HITS.pool.root.1
[2025-10-14 06:43:48]  *** Contents of shared directory: ***
[2025-10-14 06:43:48] total 408480
[2025-10-14 06:43:48] -rw-r--r-- 2 boincer umatlas 224823692 Oct 14 04:58 ATLAS.root_0
[2025-10-14 06:43:48] -rw-r--r-- 2 boincer umatlas     15120 Oct 14 04:58 start_atlas.sh
[2025-10-14 06:43:48] -rw-r--r-- 2 boincer umatlas    569687 Oct 14 04:58 input.tar.gz
[2025-10-14 06:43:48] -rw------- 1 boincer umatlas 191574756 Oct 14 06:42 HITS.pool.root.1
[2025-10-14 06:43:48] -rw------- 1 boincer umatlas   1280000 Oct 14 06:43 result.tar.gz
06:43:50 (28686): run_atlas exited; CPU time 46617.846215
06:43:50 (28686): called boinc_finish(0)

</stderr_txt>
]]>

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