Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:27:23 (1050298): wrapper (7.7.26015): starting
04:27:23 (1050298): wrapper: running run_atlas (--nthreads 9)
[2025-10-14 04:27:23] Arguments: --nthreads 9
[2025-10-14 04:27:23] Threads: 9
[2025-10-14 04:27:23] Checking for CVMFS
[2025-10-14 04:27:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 04:27:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 04:27:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 04:27:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 04:27:24] 2.13.2.0 2849342 131880 516276 151690 0 66 25289622 32935937 26988 16776704 0 274222630 99.644 251048664 20795 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-14 04:27:24] CVMFS is ok
[2025-10-14 04:27:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 04:27:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 04:27:24] Further information can be found at the LHC@home message board.
[2025-10-14 04:27:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 04:27:24] Checking for apptainer binary...
[2025-10-14 04:27:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 04:27:24] Running /usr/bin/apptainer --version
[2025-10-14 04:27:24] apptainer version 1.4.3-1.el9
[2025-10-14 04:27:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 04:27:24] c6-8-25-4.aglt2.org
[2025-10-14 04:27:24] apptainer works
[2025-10-14 04:27:24] Set ATHENA_PROC_NUMBER=9
[2025-10-14 04:27:24] Set ATHENA_CORE_NUMBER=9
[2025-10-14 04:27:24] Starting ATLAS job with PandaID=6844028081
[2025-10-14 04:27:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 06:04:52]  *** The last 200 lines of the pilot log: ***
[2025-10-14 06:04:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e5/c2/log.46676269._097147.job.log.tgz.1
[2025-10-14 06:04:52]  workdir=None
[2025-10-14 06:04:52] ]
[2025-10-14 06:04:52] 2025-10-14 10:03:39,642 | INFO     | transferring file log.46676269._097147.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6844028081/log.46676269._097147.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-14 06:04:52] 2025-10-14 10:03:39,643 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6844028081/log.46676269._097147.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._097147.job
[2025-10-14 06:04:52] 2025-10-14 10:03:39,666 | INFO     | adding to output.list: log.46676269._097147.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e5/c2/log.46676269._097147.job.log.tg
[2025-10-14 06:04:52] 2025-10-14 10:03:39,667 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-14 06:04:52] 2025-10-14 10:03:39,668 | INFO     | summary of transferred files:
[2025-10-14 06:04:52] 2025-10-14 10:03:39,668 | INFO     |  -- lfn=log.46676269._097147.job.log.tgz.1, status_code=0, status=transferred
[2025-10-14 06:04:52] 2025-10-14 10:03:39,668 | INFO     | stage-out finished correctly
[2025-10-14 06:04:52] 2025-10-14 10:03:39,770 | INFO     | time since job start (5764s) is within the limit (172800.0s)
[2025-10-14 06:04:52] 2025-10-14 10:03:41,776 | INFO     | time since job start (5766s) is within the limit (172800.0s)
[2025-10-14 06:04:52] 2025-10-14 10:03:42,561 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-14 06:04:52] 2025-10-14 10:03:43,328 | INFO     | job 6844028081 has state=finished
[2025-10-14 06:04:52] 2025-10-14 10:03:43,328 | INFO     | preparing for final server update for job 6844028081 in state='finished'
[2025-10-14 06:04:52] 2025-10-14 10:03:43,330 | INFO     | this job has now completed (state=finished)
[2025-10-14 06:04:52] 2025-10-14 10:03:43,330 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-14 06:04:52] 2025-10-14 10:03:43,330 | INFO     | log transfer has been attempted: DONE
[2025-10-14 06:04:52] 2025-10-14 10:03:43,330 | INFO     | job 6844028081 has finished - writing final server update
[2025-10-14 06:04:52] 2025-10-14 10:03:43,331 | INFO     | total number of processed events: 400 (read)
[2025-10-14 06:04:52] 2025-10-14 10:03:43,341 | INFO     | executing command: lscpu
[2025-10-14 06:04:52] 2025-10-14 10:03:43,430 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-14 06:04:52] 2025-10-14 10:03:43,575 | WARNING  | process 1060599 can no longer be monitored (due to stat problems) - aborting
[2025-10-14 06:04:52] 2025-10-14 10:03:43,576 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6844028081/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 06:04:52] 2025-10-14 10:03:43,782 | INFO     | time since job start (5768s) is within the limit (172800.0s)
[2025-10-14 06:04:52] 2025-10-14 10:03:44,043 | INFO     | number of running child processes to parent process 1060599: 1
[2025-10-14 06:04:52] 2025-10-14 10:03:44,043 | INFO     | maximum number of monitored processes: 6
[2025-10-14 06:04:52] 2025-10-14 10:03:45,789 | INFO     | time since job start (5770s) is within the limit (172800.0s)
[2025-10-14 06:04:52] 2025-10-14 10:03:45,789 | INFO     | 5773s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-14 06:04:52] 2025-10-14 10:03:46,548 | INFO     | monitor loop #403: job 0:6844028081 is in state 'finished'
[2025-10-14 06:04:52] 2025-10-14 10:03:46,548 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 06:04:52] 2025-10-14 10:03:47,627 | INFO     | PID=1054054 has CPU usage=17.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-14 06:04:52] 2025-10-14 10:03:47,628 | INFO     | .. there are 32 such processes running
[2025-10-14 06:04:52] 2025-10-14 10:03:48,629 | INFO     | time since job start (5773s) is within the limit (172800.0s)
[2025-10-14 06:04:52] 2025-10-14 10:03:49,052 | INFO     | monitor loop #404: job 0:6844028081 is in state 'finished'
[2025-10-14 06:04:52] 2025-10-14 10:03:49,053 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 06:04:52] 2025-10-14 10:03:49,256 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-14 06:04:52] 2025-10-14 10:03:49,271 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2601.310093749999
[2025-10-14 06:04:52] 2025-10-14 10:03:49,289 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6844028081/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 06:04:52] 2025-10-14 10:03:49,290 | INFO     | extracted standard info from prmon json
[2025-10-14 06:04:52] 2025-10-14 10:03:49,291 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 06:04:52] 2025-10-14 10:03:49,291 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 06:04:52] 2025-10-14 10:03:49,291 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 06:04:52] 2025-10-14 10:03:49,291 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 06:04:52] 2025-10-14 10:03:49,294 | INFO     | fitting pss+swap vs Time
[2025-10-14 06:04:52] 2025-10-14 10:03:49,294 | INFO     | sum of square deviations: 211294303.89772764
[2025-10-14 06:04:52] 2025-10-14 10:03:49,295 | INFO     | sum of deviations: -23971222020.65909
[2025-10-14 06:04:52] 2025-10-14 10:03:49,295 | INFO     | mean x: 1760433438.534091
[2025-10-14 06:04:52] 2025-10-14 10:03:49,295 | INFO     | mean y: 2484967.8863636362
[2025-10-14 06:04:52] 2025-10-14 10:03:49,295 | INFO     | -- intersect: 199722685793.17154
[2025-10-14 06:04:52] 2025-10-14 10:03:49,295 | INFO     | intersect: 199722685793.17154
[2025-10-14 06:04:52] 2025-10-14 10:03:49,296 | INFO     | chi2: 0.1603418621371637
[2025-10-14 06:04:52] 2025-10-14 10:03:49,296 | INFO     | -- intersect: 199722685793.17154
[2025-10-14 06:04:52] 2025-10-14 10:03:49,296 | INFO     | current memory leak: -113.45 B/s (using 88 data points, chi2=0.16)
[2025-10-14 06:04:52] 2025-10-14 10:03:49,297 | INFO     | could have reported an average CPU frequency of 2671 MHz (7 samples)
[2025-10-14 06:04:52] 2025-10-14 10:03:49,297 | INFO     | ..............................
[2025-10-14 06:04:52] 2025-10-14 10:03:49,297 | INFO     | . Timing measurements:
[2025-10-14 06:04:52] 2025-10-14 10:03:49,297 | INFO     | . get job = 0 s
[2025-10-14 06:04:52] 2025-10-14 10:03:49,297 | INFO     | . initial setup = 2 s
[2025-10-14 06:04:52] 2025-10-14 10:03:49,297 | INFO     | . payload setup = 5 s
[2025-10-14 06:04:52] 2025-10-14 10:03:49,297 | INFO     | . stage-in = 0 s
[2025-10-14 06:04:52] 2025-10-14 10:03:49,297 | INFO     | . payload execution = 5739 s
[2025-10-14 06:04:52] 2025-10-14 10:03:49,297 | INFO     | . stage-out = 1 s
[2025-10-14 06:04:52] 2025-10-14 10:03:49,300 | INFO     | . log creation = 0 s
[2025-10-14 06:04:52] 2025-10-14 10:03:49,300 | INFO     | ..............................
[2025-10-14 06:04:52] 2025-10-14 10:03:49,414 | INFO     | 
[2025-10-14 06:04:52] 2025-10-14 10:03:49,414 | INFO     | job summary report
[2025-10-14 06:04:52] 2025-10-14 10:03:49,414 | INFO     | --------------------------------------------------
[2025-10-14 06:04:52] 2025-10-14 10:03:49,414 | INFO     | PanDA job id: 6844028081
[2025-10-14 06:04:52] 2025-10-14 10:03:49,414 | INFO     | task id: 46676269
[2025-10-14 06:04:52] 2025-10-14 10:03:49,415 | INFO     | errors: (none)
[2025-10-14 06:04:52] 2025-10-14 10:03:49,415 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 06:04:52] 2025-10-14 10:03:49,415 | INFO     | pilot state: finished 
[2025-10-14 06:04:52] 2025-10-14 10:03:49,415 | INFO     | transexitcode: 0
[2025-10-14 06:04:52] 2025-10-14 10:03:49,415 | INFO     | exeerrorcode: 0
[2025-10-14 06:04:52] 2025-10-14 10:03:49,415 | INFO     | exeerrordiag: 
[2025-10-14 06:04:52] 2025-10-14 10:03:49,415 | INFO     | exitcode: 0
[2025-10-14 06:04:52] 2025-10-14 10:03:49,415 | INFO     | exitmsg: OK
[2025-10-14 06:04:52] 2025-10-14 10:03:49,415 | INFO     | cpuconsumptiontime: 45776 s
[2025-10-14 06:04:52] 2025-10-14 10:03:49,415 | INFO     | nevents: 400
[2025-10-14 06:04:52] 2025-10-14 10:03:49,415 | INFO     | neventsw: 0
[2025-10-14 06:04:52] 2025-10-14 10:03:49,415 | INFO     | pid: 1060599
[2025-10-14 06:04:52] 2025-10-14 10:03:49,415 | INFO     | pgrp: 1060599
[2025-10-14 06:04:52] 2025-10-14 10:03:49,416 | INFO     | corecount: 9
[2025-10-14 06:04:52] 2025-10-14 10:03:49,416 | INFO     | event service: False
[2025-10-14 06:04:52] 2025-10-14 10:03:49,416 | INFO     | sizes: {0: 2348856, 1: 2348856, 4: 2349146, 11: 2349174, 5748: 2376019, 5749: 2385017, 5752: 2385201, 5759: 2385395}
[2025-10-14 06:04:52] 2025-10-14 10:03:49,416 | INFO     | --------------------------------------------------
[2025-10-14 06:04:52] 2025-10-14 10:03:49,416 | INFO     | 
[2025-10-14 06:04:52] 2025-10-14 10:03:49,416 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-14 06:04:52] 2025-10-14 10:03:49,446 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 06:04:52] 2025-10-14 10:03:49,447 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 06:04:52] 2025-10-14 10:03:49,447 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 06:04:52] 2025-10-14 10:03:49,447 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 06:04:52] 2025-10-14 10:03:49,447 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 06:04:52] 2025-10-14 10:03:49,447 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 06:04:52] 2025-10-14 10:03:49,447 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 06:04:52] 2025-10-14 10:03:49,447 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 06:04:52] 2025-10-14 10:03:49,448 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 06:04:52] 2025-10-14 10:03:49,448 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 06:04:52] 2025-10-14 10:03:49,448 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 06:04:52] 2025-10-14 10:03:49,448 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 06:04:52] 2025-10-14 10:03:49,448 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 06:04:52] 2025-10-14 10:03:49,448 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 06:04:52] 2025-10-14 10:03:49,448 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 06:04:52] 2025-10-14 10:03:49,448 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 06:04:52] 2025-10-14 10:03:49,448 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 06:04:52] 2025-10-14 10:03:49,448 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 06:04:52] 2025-10-14 10:03:49,448 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 06:04:52] 2025-10-14 10:03:49,448 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 06:04:52] 2025-10-14 10:03:49,449 | INFO     | job 6844028081 has completed (purged errors)
[2025-10-14 06:04:52] 2025-10-14 10:03:49,449 | INFO     | overall cleanup function is called
[2025-10-14 06:04:52] 2025-10-14 10:03:50,459 | INFO     | --- collectZombieJob: --- 10, [1060599]
[2025-10-14 06:04:52] 2025-10-14 10:03:50,459 | INFO     | zombie collector waiting for pid 1060599
[2025-10-14 06:04:52] 2025-10-14 10:03:50,459 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 06:04:52] 2025-10-14 10:03:50,459 | INFO     | collected zombie processes
[2025-10-14 06:04:52] 2025-10-14 10:03:50,459 | INFO     | will attempt to kill all subprocesses of pid=1060599
[2025-10-14 06:04:52] 2025-10-14 10:03:50,894 | INFO     | process IDs to be killed: [1060599] (in reverse order)
[2025-10-14 06:04:52] 2025-10-14 10:03:51,049 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 06:04:52] 2025-10-14 10:03:51,050 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 06:04:52] 2025-10-14 10:03:51,071 | INFO     | did not find any defunct processes belonging to 1060599
[2025-10-14 06:04:52] 2025-10-14 10:03:51,090 | INFO     | did not find any defunct processes belonging to 1060599
[2025-10-14 06:04:52] 2025-10-14 10:03:51,091 | INFO     | ready for new job
[2025-10-14 06:04:52] 2025-10-14 10:03:51,091 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 06:04:52] 2025-10-14 10:03:51,093 | INFO     | ***************************************
[2025-10-14 06:04:52] 2025-10-14 10:03:51,094 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 06:04:52] 2025-10-14 10:03:51,094 | INFO     | ***************************************
[2025-10-14 06:04:52] 2025-10-14 10:03:51,094 | INFO     | 
[2025-10-14 06:04:52] 2025-10-14 10:03:51,112 | INFO     | architecture information:
[2025-10-14 06:04:52] 2025-10-14 10:03:51,113 | INFO     | executing command: cat /etc/os-release
[2025-10-14 06:04:52] 2025-10-14 10:03:51,137 | INFO     | cat /etc/os-release:
[2025-10-14 06:04:52] NAME="CentOS Linux"
[2025-10-14 06:04:52] VERSION="7 (Core)"
[2025-10-14 06:04:52] ID="centos"
[2025-10-14 06:04:52] ID_LIKE="rhel fedora"
[2025-10-14 06:04:52] VERSION_ID="7"
[2025-10-14 06:04:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 06:04:52] ANSI_COLOR="0;31"
[2025-10-14 06:04:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 06:04:52] HOME_URL="https://www.centos.org/"
[2025-10-14 06:04:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 06:04:52] 
[2025-10-14 06:04:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 06:04:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 06:04:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 06:04:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 06:04:52] 
[2025-10-14 06:04:52] 2025-10-14 10:03:51,137 | INFO     | ***************************************
[2025-10-14 06:04:52] 2025-10-14 10:03:51,640 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-14 06:04:52] 2025-10-14 10:03:51,670 | INFO     | sufficient remaining disk space (76524027904 B)
[2025-10-14 06:04:52] 2025-10-14 10:03:51,671 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 06:04:52] 2025-10-14 10:03:51,671 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 06:04:52] 2025-10-14 10:03:51,671 | INFO     | update_server=False
[2025-10-14 06:04:52] 2025-10-14 10:03:51,671 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 06:04:52] 2025-10-14 10:03:51,773 | INFO     | all job control threads have been joined
[2025-10-14 06:04:52] 2025-10-14 10:03:52,152 | INFO     | all data control threads have been joined
[2025-10-14 06:04:52] 2025-10-14 10:03:52,541 | INFO     | all payload control threads have been joined
[2025-10-14 06:04:52] 2025-10-14 10:03:52,562 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 06:04:52] 2025-10-14 10:03:52,563 | INFO     | aborting loop
[2025-10-14 06:04:52] 2025-10-14 10:03:52,677 | INFO     | [job] retrieve thread has finished
[2025-10-14 06:04:52] 2025-10-14 10:03:52,779 | INFO     | [job] control thread has finished
[2025-10-14 06:04:52] 2025-10-14 10:03:52,793 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 06:04:52] 2025-10-14 10:03:53,062 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 06:04:52] 2025-10-14 10:03:53,126 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 06:04:52] 2025-10-14 10:03:53,161 | INFO     | [data] control thread has finished
[2025-10-14 06:04:52] 2025-10-14 10:03:53,192 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 06:04:52] 2025-10-14 10:03:53,290 | INFO     | [payload] failed_post thread has finished
[2025-10-14 06:04:52] 2025-10-14 10:03:53,414 | INFO     | [data] copytool_in thread has finished
[2025-10-14 06:04:52] 2025-10-14 10:03:53,547 | INFO     | [payload] control thread has finished
[2025-10-14 06:04:52] 2025-10-14 10:03:53,568 | INFO     | [job] job monitor thread has finished
[2025-10-14 06:04:52] 2025-10-14 10:03:53,655 | INFO     | [job] validate thread has finished
[2025-10-14 06:04:52] 2025-10-14 10:03:53,853 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 06:04:52] 2025-10-14 10:03:53,993 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 06:04:52] 2025-10-14 10:03:54,050 | INFO     | [payload] validate_post thread has finished
[2025-10-14 06:04:52] 2025-10-14 10:03:54,426 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 06:04:52] 2025-10-14 10:03:54,800 | INFO     | [data] copytool_out thread has finished
[2025-10-14 06:04:52] 2025-10-14 10:03:55,434 | INFO     | [job] queue monitor thread has finished
[2025-10-14 06:04:52] 2025-10-14 10:03:57,199 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 06:04:52] 2025-10-14 10:04:22,420 | INFO     | PID=1054054 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 06:04:52] 2025-10-14 10:04:22,420 | INFO     | .. there are 32 such processes running
[2025-10-14 06:04:52] 2025-10-14 10:04:22,425 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 06:04:52] 2025-10-14 10:04:22,425 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 06:04:52] 2025-10-14 10:04:22,425 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 06:04:52] 2025-10-14 10:04:44,805 | INFO     | [monitor] cgroup control has ended
[2025-10-14 06:04:52] 2025-10-14 10:04:46,614 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140258307430208)>', '<ExcThread(monitor, started 140257945163520)>']
[2025-10-14 06:04:52] 2025-10-14 10:04:47,560 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 06:04:52] 2025-10-14 10:04:47,561 | INFO     | [monitor] control thread has ended
[2025-10-14 06:04:52] 2025-10-14 10:04:51,640 | INFO     | all workflow threads have been joined
[2025-10-14 06:04:52] 2025-10-14 10:04:51,641 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 06:04:52] 2025-10-14 10:04:51,641 | INFO     | traces error code: 0
[2025-10-14 06:04:52] 2025-10-14 10:04:51,642 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 06:04:52] 2025-10-14 10:04:51,920 [wrapper] ==== pilot stdout END ====
[2025-10-14 06:04:52] 2025-10-14 10:04:51,924 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 06:04:52] 2025-10-14 10:04:51,927 [wrapper] pilotpid: 1054054
[2025-10-14 06:04:52] 2025-10-14 10:04:51,930 [wrapper] Pilot exit status: 0
[2025-10-14 06:04:52] 2025-10-14 10:04:51,944 [wrapper] pandaids: 6844028081
[2025-10-14 06:04:52] 2025-10-14 10:04:52,043 [wrapper] cleanup supervisor_pilot 1356917 1054055
[2025-10-14 06:04:52] 2025-10-14 10:04:52,047 [wrapper] Test setup, not cleaning
[2025-10-14 06:04:52] 2025-10-14 10:04:52,051 [wrapper] apfmon messages muted
[2025-10-14 06:04:52] 2025-10-14 10:04:52,055 [wrapper] ==== wrapper stdout END ====
[2025-10-14 06:04:52] 2025-10-14 10:04:52,061 [wrapper] ==== wrapper stderr END ====
[2025-10-14 06:04:52]  *** Error codes and diagnostics ***
[2025-10-14 06:04:52]     "exeErrorCode": 0,
[2025-10-14 06:04:52]     "exeErrorDiag": "",
[2025-10-14 06:04:52]     "pilotErrorCode": 0,
[2025-10-14 06:04:52]     "pilotErrorDiag": "",
[2025-10-14 06:04:52]  *** Listing of results directory ***
[2025-10-14 06:04:52] total 415608
[2025-10-14 06:04:52] -rw-r--r--. 1 boincer umatlas    557409 Oct 14 03:54 pilot3.tar.gz
[2025-10-14 06:04:52] -rwx------. 1 boincer umatlas     36292 Oct 14 04:27 runpilot2-wrapper.sh
[2025-10-14 06:04:52] -rw-r--r--. 1 boincer umatlas      5112 Oct 14 04:27 queuedata.json
[2025-10-14 06:04:52] -rw-r--r--. 1 boincer umatlas       100 Oct 14 04:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 06:04:52] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 14 04:27 run_atlas
[2025-10-14 06:04:52] -rw-r--r--. 1 boincer umatlas       105 Oct 14 04:27 job.xml
[2025-10-14 06:04:52] -rw-r--r--. 2 boincer umatlas 219107996 Oct 14 04:27 EVNT.46676267._004350.pool.root.1
[2025-10-14 06:04:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 04:27 start_atlas.sh
[2025-10-14 06:04:52] drwxrwx--x. 2 boincer umatlas      4096 Oct 14 04:27 shared
[2025-10-14 06:04:52] -rw-r--r--. 2 boincer umatlas    569679 Oct 14 04:27 input.tar.gz
[2025-10-14 06:04:52] -rw-r--r--. 1 boincer umatlas         0 Oct 14 04:27 boinc_lockfile
[2025-10-14 06:04:52] -rw-r--r--. 1 boincer umatlas      2549 Oct 14 04:27 pandaJob.out
[2025-10-14 06:04:52] -rw-------. 1 boincer umatlas    972799 Oct 14 04:27 agis_schedconf.cvmfs.json
[2025-10-14 06:04:52] -rw-------. 1 boincer umatlas   1560580 Oct 14 04:27 agis_ddmendpoints.agis.ALL.json
[2025-10-14 06:04:52] drwx------. 5 boincer umatlas      4096 Oct 14 04:27 pilot3
[2025-10-14 06:04:52] -rw-r--r--. 1 boincer umatlas      6856 Oct 14 06:02 init_data.xml
[2025-10-14 06:04:52] -rw-------. 1 boincer umatlas 200173023 Oct 14 06:02 HITS.46676269._097147.pool.root.1
[2025-10-14 06:04:52] -rw-r--r--. 1 boincer umatlas       530 Oct 14 06:02 boinc_task_state.xml
[2025-10-14 06:04:52] -rw-------. 1 boincer umatlas      1042 Oct 14 06:03 memory_monitor_summary.json
[2025-10-14 06:04:52] -rw-------. 1 boincer umatlas    376250 Oct 14 06:03 log.46676269._097147.job.log.tgz.1
[2025-10-14 06:04:52] -rw-------. 1 boincer umatlas      7835 Oct 14 06:03 heartbeat.json
[2025-10-14 06:04:52] -rw-------. 1 boincer umatlas        95 Oct 14 06:04 pilot_heartbeat.json
[2025-10-14 06:04:52] -rw-r--r--. 1 boincer umatlas      8192 Oct 14 06:04 boinc_mmap_file
[2025-10-14 06:04:52] -rw-r--r--. 1 boincer umatlas        27 Oct 14 06:04 wrapper_checkpoint.txt
[2025-10-14 06:04:52] -rw-------. 1 boincer umatlas      4824 Oct 14 06:04 pilotlog.txt
[2025-10-14 06:04:52] -rw-------. 1 boincer umatlas    820832 Oct 14 06:04 log.46676269._097147.job.log.1
[2025-10-14 06:04:52] -rw-------. 1 boincer umatlas       357 Oct 14 06:04 output.list
[2025-10-14 06:04:52] -rw-r--r--. 1 boincer umatlas       620 Oct 14 06:04 runtime_log
[2025-10-14 06:04:52] -rw-------. 1 boincer umatlas   1218560 Oct 14 06:04 result.tar.gz
[2025-10-14 06:04:52] -rw-r--r--. 1 boincer umatlas      8708 Oct 14 06:04 runtime_log.err
[2025-10-14 06:04:52] -rw-------. 1 boincer umatlas       654 Oct 14 06:04 miSKDmEYpS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmEmVMDmjf8Zin.diag
[2025-10-14 06:04:52] -rw-r--r--. 1 boincer umatlas     22428 Oct 14 06:04 stderr.txt
[2025-10-14 06:04:52] HITS file was successfully produced:
[2025-10-14 06:04:52] -rw-------. 1 boincer umatlas 200173023 Oct 14 06:02 shared/HITS.pool.root.1
[2025-10-14 06:04:52]  *** Contents of shared directory: ***
[2025-10-14 06:04:52] total 411236
[2025-10-14 06:04:52] -rw-r--r--. 2 boincer umatlas 219107996 Oct 14 04:27 ATLAS.root_0
[2025-10-14 06:04:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 14 04:27 start_atlas.sh
[2025-10-14 06:04:52] -rw-r--r--. 2 boincer umatlas    569679 Oct 14 04:27 input.tar.gz
[2025-10-14 06:04:52] -rw-------. 1 boincer umatlas 200173023 Oct 14 06:02 HITS.pool.root.1
[2025-10-14 06:04:52] -rw-------. 1 boincer umatlas   1218560 Oct 14 06:04 result.tar.gz
06:04:53 (1050298): run_atlas exited; CPU time 46005.947015
06:04:53 (1050298): called boinc_finish(0)

</stderr_txt>
]]>

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