Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:38:12 (31094): wrapper (7.7.26015): starting
07:38:12 (31094): wrapper: running run_atlas (--nthreads 8)
[2025-10-15 07:38:12] Arguments: --nthreads 8
[2025-10-15 07:38:12] Threads: 8
[2025-10-15 07:38:12] Checking for CVMFS
[2025-10-15 07:38:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-15 07:38:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-15 07:38:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-15 07:38:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-15 07:38:17] 2.11.2.0 347 224280 142928 151723 2 11 23091892 25165825 4632 130560 0 116302229 99.885 67525974 3520 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-15 07:38:17] CVMFS is ok
[2025-10-15 07:38:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-15 07:38:17] Checking for apptainer binary...
[2025-10-15 07:38:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-15 07:38:17] Running /usr/bin/apptainer --version
[2025-10-15 07:38:17] apptainer version 1.3.2-1.el7
[2025-10-15 07:38:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-15 07:38:41] cg-vwn289.simple-grid.lan
[2025-10-15 07:38:41] apptainer works
[2025-10-15 07:38:41] Set ATHENA_PROC_NUMBER=8
[2025-10-15 07:38:41] Set ATHENA_CORE_NUMBER=8
[2025-10-15 07:38:41] Starting ATLAS job with PandaID=6839318431
[2025-10-15 07:38:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-15 11:18:39]  *** The last 200 lines of the pilot log: ***
[2025-10-15 11:18:39] 2025-10-15 09:17:50,514 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-15 11:18:39] 2025-10-15 09:17:50,514 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-15 11:18:39] 2025-10-15 09:17:50,517 | INFO     | fitting pss+swap vs Time
[2025-10-15 11:18:39] 2025-10-15 09:17:50,518 | INFO     | sum of square deviations: 2593916542.0
[2025-10-15 11:18:39] 2025-10-15 09:17:50,519 | INFO     | sum of deviations: 71118791751.99998
[2025-10-15 11:18:39] 2025-10-15 09:17:50,519 | INFO     | mean x: 1760513580.0
[2025-10-15 11:18:39] 2025-10-15 09:17:50,519 | INFO     | mean y: 2420314.6798029556
[2025-10-15 11:18:39] 2025-10-15 09:17:50,519 | INFO     | -- intersect: -48266518429.220604
[2025-10-15 11:18:39] 2025-10-15 09:17:50,519 | INFO     | intersect: -48266518429.220604
[2025-10-15 11:18:39] 2025-10-15 09:17:50,520 | INFO     | chi2: 5.259928731586382
[2025-10-15 11:18:39] 2025-10-15 09:17:50,520 | INFO     | sum of square deviations: 2406926989.5
[2025-10-15 11:18:39] 2025-10-15 09:17:50,521 | INFO     | sum of deviations: 82408574395.99998
[2025-10-15 11:18:39] 2025-10-15 09:17:50,521 | INFO     | mean x: 1760513427.5
[2025-10-15 11:18:39] 2025-10-15 09:17:50,521 | INFO     | mean y: 2429303.474747475
[2025-10-15 11:18:39] 2025-10-15 09:17:50,521 | INFO     | -- intersect: -60274181660.71116
[2025-10-15 11:18:39] 2025-10-15 09:17:50,522 | INFO     | intersect: -60274181660.71116
[2025-10-15 11:18:39] 2025-10-15 09:17:50,522 | INFO     | chi2: 4.529039315698104
[2025-10-15 11:18:39] 2025-10-15 09:17:50,522 | INFO     | current chi2=4.529039315698104 (change=13.895424314386926 %)
[2025-10-15 11:18:39] 2025-10-15 09:17:50,522 | INFO     | right removable region: 197
[2025-10-15 11:18:39] 2025-10-15 09:17:50,522 | INFO     | sum of square deviations: 2406926989.5
[2025-10-15 11:18:39] 2025-10-15 09:17:50,524 | INFO     | sum of deviations: 6862131041.500004
[2025-10-15 11:18:39] 2025-10-15 09:17:50,524 | INFO     | mean x: 1760513732.5
[2025-10-15 11:18:39] 2025-10-15 09:17:50,524 | INFO     | mean y: 2472615.5505050505
[2025-10-15 11:18:39] 2025-10-15 09:17:50,524 | INFO     | -- intersect: -5016739012.17107
[2025-10-15 11:18:39] 2025-10-15 09:17:50,524 | INFO     | intersect: -5016739012.17107
[2025-10-15 11:18:39] 2025-10-15 09:17:50,524 | INFO     | chi2: 1.2276262690461315
[2025-10-15 11:18:39] 2025-10-15 09:17:50,524 | INFO     | current chi2=1.2276262690461315 (change=76.66078132058868 %)
[2025-10-15 11:18:39] 2025-10-15 09:17:50,525 | INFO     | sum of square deviations: 2229146912.0
[2025-10-15 11:18:39] 2025-10-15 09:17:50,526 | INFO     | sum of deviations: -8173686704.000002
[2025-10-15 11:18:39] 2025-10-15 09:17:50,526 | INFO     | mean x: 1760513885.0
[2025-10-15 11:18:39] 2025-10-15 09:17:50,526 | INFO     | mean y: 2485352.689119171
[2025-10-15 11:18:39] 2025-10-15 09:17:50,526 | INFO     | -- intersect: 6457819838.07807
[2025-10-15 11:18:39] 2025-10-15 09:17:50,526 | INFO     | intersect: 6457819838.07807
[2025-10-15 11:18:39] 2025-10-15 09:17:50,526 | INFO     | chi2: 0.8303888265455961
[2025-10-15 11:18:39] 2025-10-15 09:17:50,527 | INFO     | current chi2=0.8303888265455961 (change=32.35817386094139 %)
[2025-10-15 11:18:39] 2025-10-15 09:17:50,527 | INFO     | sum of square deviations: 2060343747.0
[2025-10-15 11:18:39] 2025-10-15 09:17:50,528 | INFO     | sum of deviations: -3346217311.499996
[2025-10-15 11:18:39] 2025-10-15 09:17:50,528 | INFO     | mean x: 1760514037.5
[2025-10-15 11:18:39] 2025-10-15 09:17:50,528 | INFO     | mean y: 2480955.5478723403
[2025-10-15 11:18:39] 2025-10-15 09:17:50,528 | INFO     | -- intersect: 2861742939.378988
[2025-10-15 11:18:39] 2025-10-15 09:17:50,528 | INFO     | intersect: 2861742939.378988
[2025-10-15 11:18:39] 2025-10-15 09:17:50,529 | INFO     | chi2: 0.7961085378150763
[2025-10-15 11:18:39] 2025-10-15 09:17:50,529 | INFO     | current chi2=0.7961085378150763 (change=4.128221338565602 %)
[2025-10-15 11:18:39] 2025-10-15 09:17:50,529 | INFO     | left removable region: 30
[2025-10-15 11:18:39] 2025-10-15 09:17:50,529 | INFO     | sum of square deviations: 1444149868.0
[2025-10-15 11:18:39] 2025-10-15 09:17:50,530 | INFO     | sum of deviations: 5384360199.999995
[2025-10-15 11:18:39] 2025-10-15 09:17:50,530 | INFO     | mean x: 1760514312.0
[2025-10-15 11:18:39] 2025-10-15 09:17:50,530 | INFO     | mean y: 2495882.371257485
[2025-10-15 11:18:39] 2025-10-15 09:17:50,531 | INFO     | -- intersect: -6561395721.338098
[2025-10-15 11:18:39] 2025-10-15 09:17:50,531 | INFO     | intersect: -6561395721.338098
[2025-10-15 11:18:39] 2025-10-15 09:17:50,531 | INFO     | chi2: 0.0005383693353867156
[2025-10-15 11:18:39] 2025-10-15 09:17:50,531 | INFO     | -- intersect: -6561395721.338098
[2025-10-15 11:18:39] 2025-10-15 09:17:50,531 | INFO     | current memory leak: 3.73 B/s (using 167 data points, chi2=0.00)
[2025-10-15 11:18:39] 2025-10-15 09:17:50,532 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2025-10-15 11:18:39] 2025-10-15 09:17:50,532 | INFO     | ..............................
[2025-10-15 11:18:39] 2025-10-15 09:17:50,532 | INFO     | . Timing measurements:
[2025-10-15 11:18:39] 2025-10-15 09:17:50,532 | INFO     | . get job = 0 s
[2025-10-15 11:18:39] 2025-10-15 09:17:50,532 | INFO     | . initial setup = 8 s
[2025-10-15 11:18:39] 2025-10-15 09:17:50,532 | INFO     | . payload setup = 144 s
[2025-10-15 11:18:39] 2025-10-15 09:17:50,532 | INFO     | . stage-in = 0 s
[2025-10-15 11:18:39] 2025-10-15 09:17:50,532 | INFO     | . payload execution = 12513 s
[2025-10-15 11:18:39] 2025-10-15 09:17:50,532 | INFO     | . stage-out = 3 s
[2025-10-15 11:18:39] 2025-10-15 09:17:50,532 | INFO     | . log creation = 1 s
[2025-10-15 11:18:39] 2025-10-15 09:17:50,532 | INFO     | ..............................
[2025-10-15 11:18:39] 2025-10-15 09:17:50,628 | INFO     | 
[2025-10-15 11:18:39] 2025-10-15 09:17:50,628 | INFO     | job summary report
[2025-10-15 11:18:39] 2025-10-15 09:17:50,628 | INFO     | --------------------------------------------------
[2025-10-15 11:18:39] 2025-10-15 09:17:50,628 | INFO     | PanDA job id: 6839318431
[2025-10-15 11:18:39] 2025-10-15 09:17:50,628 | INFO     | task id: 46676269
[2025-10-15 11:18:39] 2025-10-15 09:17:50,628 | INFO     | errors: (none)
[2025-10-15 11:18:39] 2025-10-15 09:17:50,628 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-15 11:18:39] 2025-10-15 09:17:50,628 | INFO     | pilot state: finished 
[2025-10-15 11:18:39] 2025-10-15 09:17:50,628 | INFO     | transexitcode: 0
[2025-10-15 11:18:39] 2025-10-15 09:17:50,629 | INFO     | exeerrorcode: 0
[2025-10-15 11:18:39] 2025-10-15 09:17:50,629 | INFO     | exeerrordiag: 
[2025-10-15 11:18:39] 2025-10-15 09:17:50,629 | INFO     | exitcode: 0
[2025-10-15 11:18:39] 2025-10-15 09:17:50,629 | INFO     | exitmsg: OK
[2025-10-15 11:18:39] 2025-10-15 09:17:50,629 | INFO     | cpuconsumptiontime: 46627 s
[2025-10-15 11:18:39] 2025-10-15 09:17:50,629 | INFO     | nevents: 400
[2025-10-15 11:18:39] 2025-10-15 09:17:50,629 | INFO     | neventsw: 0
[2025-10-15 11:18:39] 2025-10-15 09:17:50,629 | INFO     | pid: 9408
[2025-10-15 11:18:39] 2025-10-15 09:17:50,629 | INFO     | pgrp: 9408
[2025-10-15 11:18:39] 2025-10-15 09:17:50,629 | INFO     | corecount: 8
[2025-10-15 11:18:39] 2025-10-15 09:17:50,629 | INFO     | event service: False
[2025-10-15 11:18:39] 2025-10-15 09:17:50,629 | INFO     | sizes: {0: 2348094, 1: 2348950, 2: 2348950, 12: 2348978, 23: 2349006, 34: 2349034, 44: 2349190, 55: 2349218, 66: 2349246, 77: 2349274, 87: 2349330, 91: 2349900, 98
[2025-10-15 11:18:39] 2025-10-15 09:17:50,629 | INFO     | --------------------------------------------------
[2025-10-15 11:18:39] 2025-10-15 09:17:50,629 | INFO     | 
[2025-10-15 11:18:39] 2025-10-15 09:17:50,630 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-10-15 11:18:39] 2025-10-15 09:17:50,710 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-15 11:18:39] 2025-10-15 09:17:50,711 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-15 11:18:39] 2025-10-15 09:17:50,711 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-15 11:18:39] 2025-10-15 09:17:50,711 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-15 11:18:39] 2025-10-15 09:17:50,711 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-15 11:18:39] 2025-10-15 09:17:50,711 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-15 11:18:39] 2025-10-15 09:17:50,711 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-15 11:18:39] 2025-10-15 09:17:50,711 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-15 11:18:39] 2025-10-15 09:17:50,711 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-15 11:18:39] 2025-10-15 09:17:50,711 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-15 11:18:39] 2025-10-15 09:17:50,711 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-15 11:18:39] 2025-10-15 09:17:50,712 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-15 11:18:39] 2025-10-15 09:17:50,712 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-15 11:18:39] 2025-10-15 09:17:50,712 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-15 11:18:39] 2025-10-15 09:17:50,712 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-15 11:18:39] 2025-10-15 09:17:50,712 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-15 11:18:39] 2025-10-15 09:17:50,712 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-15 11:18:39] 2025-10-15 09:17:50,712 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-15 11:18:39] 2025-10-15 09:17:50,712 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-15 11:18:39] 2025-10-15 09:17:50,712 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-15 11:18:39] 2025-10-15 09:17:50,712 | INFO     | job 6839318431 has completed (purged errors)
[2025-10-15 11:18:39] 2025-10-15 09:17:50,712 | INFO     | overall cleanup function is called
[2025-10-15 11:18:39] 2025-10-15 09:17:51,721 | INFO     | --- collectZombieJob: --- 10, [9408]
[2025-10-15 11:18:39] 2025-10-15 09:17:51,721 | INFO     | zombie collector waiting for pid 9408
[2025-10-15 11:18:39] 2025-10-15 09:17:51,721 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-15 11:18:39] 2025-10-15 09:17:51,721 | INFO     | collected zombie processes
[2025-10-15 11:18:39] 2025-10-15 09:17:51,721 | INFO     | will attempt to kill all subprocesses of pid=9408
[2025-10-15 11:18:39] 2025-10-15 09:17:51,810 | INFO     | process IDs to be killed: [9408] (in reverse order)
[2025-10-15 11:18:39] 2025-10-15 09:17:51,968 | WARNING  | found no corresponding commands to process id(s)
[2025-10-15 11:18:39] 2025-10-15 09:17:51,969 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-15 11:18:39] 2025-10-15 09:17:51,972 | INFO     | did not find any defunct processes belonging to 9408
[2025-10-15 11:18:39] 2025-10-15 09:17:51,974 | INFO     | did not find any defunct processes belonging to 9408
[2025-10-15 11:18:39] 2025-10-15 09:17:51,975 | INFO     | ready for new job
[2025-10-15 11:18:39] 2025-10-15 09:17:51,975 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-15 11:18:39] 2025-10-15 09:17:51,977 | INFO     | ***************************************
[2025-10-15 11:18:39] 2025-10-15 09:17:51,977 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-15 11:18:39] 2025-10-15 09:17:51,977 | INFO     | ***************************************
[2025-10-15 11:18:39] 2025-10-15 09:17:51,977 | INFO     | 
[2025-10-15 11:18:39] 2025-10-15 09:17:51,977 | INFO     | pilot is running in a VM
[2025-10-15 11:18:39] 2025-10-15 09:17:51,977 | INFO     | architecture information:
[2025-10-15 11:18:39] 2025-10-15 09:17:51,984 | INFO     | executing command: cat /etc/os-release
[2025-10-15 11:18:39] 2025-10-15 09:17:52,146 | INFO     | cat /etc/os-release:
[2025-10-15 11:18:39] NAME="CentOS Linux"
[2025-10-15 11:18:39] VERSION="7 (Core)"
[2025-10-15 11:18:39] ID="centos"
[2025-10-15 11:18:39] ID_LIKE="rhel fedora"
[2025-10-15 11:18:39] VERSION_ID="7"
[2025-10-15 11:18:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-15 11:18:39] ANSI_COLOR="0;31"
[2025-10-15 11:18:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-15 11:18:39] HOME_URL="https://www.centos.org/"
[2025-10-15 11:18:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-15 11:18:39] 
[2025-10-15 11:18:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-15 11:18:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-15 11:18:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-15 11:18:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-15 11:18:39] 
[2025-10-15 11:18:39] 2025-10-15 09:17:52,146 | INFO     | ***************************************
[2025-10-15 11:18:39] 2025-10-15 09:17:52,650 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-10-15 11:18:39] 2025-10-15 09:17:52,684 | INFO     | sufficient remaining disk space (495830695936 B)
[2025-10-15 11:18:39] 2025-10-15 09:17:52,685 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-15 11:18:39] 2025-10-15 09:17:52,685 | INFO     | current server update state: UPDATING_FINAL
[2025-10-15 11:18:39] 2025-10-15 09:17:52,685 | INFO     | update_server=False
[2025-10-15 11:18:39] 2025-10-15 09:17:52,685 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-15 11:18:39] 2025-10-15 09:17:53,071 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-15 11:18:39] 2025-10-15 09:17:53,071 | INFO     | aborting loop
[2025-10-15 11:18:39] 2025-10-15 09:17:53,127 | INFO     | all payload control threads have been joined
[2025-10-15 11:18:39] 2025-10-15 09:17:53,405 | INFO     | all job control threads have been joined
[2025-10-15 11:18:39] 2025-10-15 09:17:53,655 | INFO     | all data control threads have been joined
[2025-10-15 11:18:39] 2025-10-15 09:17:53,691 | INFO     | [job] retrieve thread has finished
[2025-10-15 11:18:39] 2025-10-15 09:17:53,755 | INFO     | [data] copytool_in thread has finished
[2025-10-15 11:18:39] 2025-10-15 09:17:53,905 | INFO     | [payload] validate_post thread has finished
[2025-10-15 11:18:39] 2025-10-15 09:17:54,006 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-15 11:18:39] 2025-10-15 09:17:54,077 | INFO     | [job] job monitor thread has finished
[2025-10-15 11:18:39] 2025-10-15 09:17:54,096 | INFO     | [payload] failed_post thread has finished
[2025-10-15 11:18:39] 2025-10-15 09:17:54,133 | INFO     | [payload] control thread has finished
[2025-10-15 11:18:39] 2025-10-15 09:17:54,411 | INFO     | [job] control thread has finished
[2025-10-15 11:18:39] 2025-10-15 09:17:54,557 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-15 11:18:39] 2025-10-15 09:17:54,618 | INFO     | [payload] execute_payloads thread has finished
[2025-10-15 11:18:39] 2025-10-15 09:17:54,661 | INFO     | [data] control thread has finished
[2025-10-15 11:18:39] 2025-10-15 09:17:54,736 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-15 11:18:39] 2025-10-15 09:17:54,985 | INFO     | [job] create_data_payload thread has finished
[2025-10-15 11:18:39] 2025-10-15 09:17:55,059 | INFO     | [job] validate thread has finished
[2025-10-15 11:18:39] 2025-10-15 09:17:55,076 | INFO     | [payload] validate_pre thread has finished
[2025-10-15 11:18:39] 2025-10-15 09:17:55,641 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-15 11:18:39] 2025-10-15 09:17:56,013 | INFO     | [data] copytool_out thread has finished
[2025-10-15 11:18:39] 2025-10-15 09:17:56,647 | INFO     | [job] queue monitor thread has finished
[2025-10-15 11:18:39] 2025-10-15 09:17:58,745 | INFO     | [data] queue_monitor thread has finished
[2025-10-15 11:18:39] 2025-10-15 09:18:22,097 | INFO     | PID=2824 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-15 11:18:39] 2025-10-15 09:18:22,098 | INFO     | .. there are 9 such processes running
[2025-10-15 11:18:39] 2025-10-15 09:18:22,098 | INFO     | found 0 job(s) in 20 queues
[2025-10-15 11:18:39] 2025-10-15 09:18:22,098 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-15 11:18:39] 2025-10-15 09:18:22,098 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-15 11:18:39] 2025-10-15 09:18:27,664 | INFO     | [monitor] cgroup control has ended
[2025-10-15 11:18:39] 2025-10-15 09:18:29,024 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140137056360256)>', '<ExcThread(monitor, started 140136461367040)>']
[2025-10-15 11:18:39] 2025-10-15 09:18:29,140 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-15 11:18:39] 2025-10-15 09:18:29,140 | INFO     | [monitor] control thread has ended
[2025-10-15 11:18:39] 2025-10-15 09:18:34,050 | INFO     | all workflow threads have been joined
[2025-10-15 11:18:39] 2025-10-15 09:18:34,050 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-15 11:18:39] 2025-10-15 09:18:34,050 | INFO     | traces error code: 0
[2025-10-15 11:18:39] 2025-10-15 09:18:34,050 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-15 11:18:39] 2025-10-15 09:18:34,389 [wrapper] ==== pilot stdout END ====
[2025-10-15 11:18:39] 2025-10-15 09:18:34,503 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-15 11:18:39] 2025-10-15 09:18:34,593 [wrapper] pilotpid: 2824
[2025-10-15 11:18:39] 2025-10-15 09:18:34,711 [wrapper] Pilot exit status: 0
[2025-10-15 11:18:39] 2025-10-15 09:18:34,834 [wrapper] pandaids: 6839318431
[2025-10-15 11:18:39] 2025-10-15 09:18:35,934 [wrapper] cleanup supervisor_pilot   502 2825
[2025-10-15 11:18:39] 2025-10-15 09:18:35,999 [wrapper] Test setup, not cleaning
[2025-10-15 11:18:39] 2025-10-15 09:18:36,063 [wrapper] apfmon messages muted
[2025-10-15 11:18:39] 2025-10-15 09:18:36,088 [wrapper] ==== wrapper stdout END ====
[2025-10-15 11:18:39] 2025-10-15 09:18:36,159 [wrapper] ==== wrapper stderr END ====
[2025-10-15 11:18:39]  *** Error codes and diagnostics ***
[2025-10-15 11:18:39]     "exeErrorCode": 0,
[2025-10-15 11:18:39]     "exeErrorDiag": "",
[2025-10-15 11:18:39]     "pilotErrorCode": 0,
[2025-10-15 11:18:39]     "pilotErrorDiag": "",
[2025-10-15 11:18:39]  *** Listing of results directory ***
[2025-10-15 11:18:39] total 416468
[2025-10-15 11:18:39] -rw-r--r--. 1 boinc boinc    557409 Oct 12 04:56 pilot3.tar.gz
[2025-10-15 11:18:39] -rw-r--r--. 1 boinc boinc      5112 Oct 12 05:00 queuedata.json
[2025-10-15 11:18:39] -rwx------. 1 boinc boinc     36292 Oct 12 05:00 runpilot2-wrapper.sh
[2025-10-15 11:18:39] -rw-r--r--. 1 boinc boinc       100 Oct 15 07:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-15 11:18:39] -rwxr-xr-x. 1 boinc boinc      7986 Oct 15 07:38 run_atlas
[2025-10-15 11:18:39] -rw-r--r--. 1 boinc boinc       105 Oct 15 07:38 job.xml
[2025-10-15 11:18:39] -rw-r--r--. 2 boinc boinc 223459620 Oct 15 07:38 EVNT.46676267._003206.pool.root.1
[2025-10-15 11:18:39] -rw-r--r--. 2 boinc boinc     15120 Oct 15 07:38 start_atlas.sh
[2025-10-15 11:18:39] drwxrwx--x. 2 boinc boinc        68 Oct 15 07:38 shared
[2025-10-15 11:18:39] -rw-r--r--. 2 boinc boinc    569678 Oct 15 07:38 input.tar.gz
[2025-10-15 11:18:39] -rw-r--r--. 1 boinc boinc      6390 Oct 15 07:38 init_data.xml
[2025-10-15 11:18:39] -rw-r--r--. 1 boinc boinc         0 Oct 15 07:38 boinc_lockfile
[2025-10-15 11:18:39] -rw-r--r--. 1 boinc boinc      2551 Oct 15 07:38 pandaJob.out
[2025-10-15 11:18:39] -rw-------. 1 boinc boinc    974015 Oct 15 07:41 agis_schedconf.cvmfs.json
[2025-10-15 11:18:39] drwx------. 5 boinc boinc      4096 Oct 15 07:42 pilot3
[2025-10-15 11:18:39] -rw-------. 1 boinc boinc 194749477 Oct 15 11:14 HITS.46676269._069852.pool.root.1
[2025-10-15 11:18:39] -rw-r--r--. 1 boinc boinc       531 Oct 15 11:15 boinc_task_state.xml
[2025-10-15 11:18:39] -rw-------. 1 boinc boinc      1013 Oct 15 11:16 memory_monitor_summary.json
[2025-10-15 11:18:39] -rw-------. 1 boinc boinc   1560740 Oct 15 11:16 agis_ddmendpoints.agis.ALL.json
[2025-10-15 11:18:39] -rw-------. 1 boinc boinc    446102 Oct 15 11:16 log.46676269._069852.job.log.tgz.1
[2025-10-15 11:18:39] -rw-------. 1 boinc boinc        95 Oct 15 11:17 pilot_heartbeat.json
[2025-10-15 11:18:39] -rw-------. 1 boinc boinc      7778 Oct 15 11:17 heartbeat.json
[2025-10-15 11:18:39] -rw-r--r--. 1 boinc boinc      8192 Oct 15 11:18 boinc_mmap_file
[2025-10-15 11:18:39] -rw-r--r--. 1 boinc boinc        28 Oct 15 11:18 wrapper_checkpoint.txt
[2025-10-15 11:18:39] -rw-------. 1 boinc boinc      4883 Oct 15 11:18 pilotlog.txt
[2025-10-15 11:18:39] -rw-------. 1 boinc boinc   1739116 Oct 15 11:18 log.46676269._069852.job.log.1
[2025-10-15 11:18:39] -rw-------. 1 boinc boinc       357 Oct 15 11:18 output.list
[2025-10-15 11:18:39] -rw-r--r--. 1 boinc boinc       620 Oct 15 11:18 runtime_log
[2025-10-15 11:18:39] -rw-------. 1 boinc boinc   2201600 Oct 15 11:18 result.tar.gz
[2025-10-15 11:18:39] -rw-r--r--. 1 boinc boinc      8703 Oct 15 11:18 runtime_log.err
[2025-10-15 11:18:39] -rw-------. 1 boinc boinc       657 Oct 15 11:18 kFuKDmTV1R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHRiNDmugh9xn.diag
[2025-10-15 11:18:39] -rw-r--r--. 1 boinc boinc     20602 Oct 15 11:18 stderr.txt
[2025-10-15 11:18:39] HITS file was successfully produced:
[2025-10-15 11:18:39] -rw-------. 1 boinc boinc 194749477 Oct 15 11:14 shared/HITS.pool.root.1
[2025-10-15 11:18:39]  *** Contents of shared directory: ***
[2025-10-15 11:18:39] total 411140
[2025-10-15 11:18:39] -rw-r--r--. 2 boinc boinc 223459620 Oct 15 07:38 ATLAS.root_0
[2025-10-15 11:18:39] -rw-r--r--. 2 boinc boinc     15120 Oct 15 07:38 start_atlas.sh
[2025-10-15 11:18:39] -rw-r--r--. 2 boinc boinc    569678 Oct 15 07:38 input.tar.gz
[2025-10-15 11:18:39] -rw-------. 1 boinc boinc 194749477 Oct 15 11:14 HITS.pool.root.1
[2025-10-15 11:18:39] -rw-------. 1 boinc boinc   2201600 Oct 15 11:18 result.tar.gz
11:18:40 (31094): run_atlas exited; CPU time 46775.584503
11:18:40 (31094): called boinc_finish(0)

</stderr_txt>
]]>

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