Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:56:10 (1221906): wrapper (7.7.26015): starting
23:56:10 (1221906): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 23:56:10] Arguments: --nthreads 9
[2025-10-13 23:56:10] Threads: 9
[2025-10-13 23:56:10] Checking for CVMFS
[2025-10-13 23:56:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 23:56:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 23:56:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 23:56:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 23:56:12] 2.13.2.0 342865 29630 106212 151683 2 297 38174511 40960001 29962 16776704 0 217826757 99.772 123175843 46300 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 23:56:12] CVMFS is ok
[2025-10-13 23:56:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 23:56:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 23:56:12] Further information can be found at the LHC@home message board.
[2025-10-13 23:56:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 23:56:12] Checking for apptainer binary...
[2025-10-13 23:56:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 23:56:12] Running /usr/bin/apptainer --version
[2025-10-13 23:56:12] apptainer version 1.4.3-1.el9
[2025-10-13 23:56:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 23:56:12] c-208-36.aglt2.org
[2025-10-13 23:56:12] apptainer works
[2025-10-13 23:56:12] Set ATHENA_PROC_NUMBER=9
[2025-10-13 23:56:12] Set ATHENA_CORE_NUMBER=9
[2025-10-13 23:56:12] Starting ATLAS job with PandaID=6832635185
[2025-10-13 23:56:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 00:55:57]  *** The last 200 lines of the pilot log: ***
[2025-10-14 00:55:57]  status=None
[2025-10-14 00:55:57]  status_code=0
[2025-10-14 00:55:57]  storage_token=
[2025-10-14 00:55:57]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6832635185/log.46376905._110310.job.log.tgz.1
[2025-10-14 00:55:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/58/log.46376905._110310.job.log.tgz.1
[2025-10-14 00:55:57]  workdir=None
[2025-10-14 00:55:57] ]
[2025-10-14 00:55:57] 2025-10-14 04:55:17,215 | INFO     | transferring file log.46376905._110310.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6832635185/log.46376905._110310.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-14 00:55:57] 2025-10-14 04:55:17,215 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6832635185/log.46376905._110310.job.log.tgz.1 /tmp/boinchome/slots/0/log.46376905._110310.job
[2025-10-14 00:55:57] 2025-10-14 04:55:17,235 | INFO     | adding to output.list: log.46376905._110310.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/58/log.46376905._110310.job.log.tg
[2025-10-14 00:55:57] 2025-10-14 04:55:17,236 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-14 00:55:57] 2025-10-14 04:55:17,236 | INFO     | summary of transferred files:
[2025-10-14 00:55:57] 2025-10-14 04:55:17,236 | INFO     |  -- lfn=log.46376905._110310.job.log.tgz.1, status_code=0, status=transferred
[2025-10-14 00:55:57] 2025-10-14 04:55:17,236 | INFO     | stage-out finished correctly
[2025-10-14 00:55:57] 2025-10-14 04:55:18,456 | INFO     | monitor loop #247: job 0:6832635185 is in state 'finished'
[2025-10-14 00:55:57] 2025-10-14 04:55:18,456 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 00:55:57] 2025-10-14 04:55:18,767 | INFO     | time since job start (3516s) is within the limit (172800.0s)
[2025-10-14 00:55:57] 2025-10-14 04:55:18,929 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-14 00:55:57] 2025-10-14 04:55:19,879 | INFO     | job 6832635185 has state=finished
[2025-10-14 00:55:57] 2025-10-14 04:55:19,879 | INFO     | preparing for final server update for job 6832635185 in state='finished'
[2025-10-14 00:55:57] 2025-10-14 04:55:19,880 | INFO     | this job has now completed (state=finished)
[2025-10-14 00:55:57] 2025-10-14 04:55:19,880 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-14 00:55:57] 2025-10-14 04:55:19,880 | INFO     | log transfer has been attempted: DONE
[2025-10-14 00:55:57] 2025-10-14 04:55:19,880 | INFO     | job 6832635185 has finished - writing final server update
[2025-10-14 00:55:57] 2025-10-14 04:55:19,880 | INFO     | total number of processed events: 400 (read)
[2025-10-14 00:55:57] 2025-10-14 04:55:19,881 | INFO     | executing command: lscpu
[2025-10-14 00:55:57] 2025-10-14 04:55:19,934 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-14 00:55:57] 2025-10-14 04:55:20,772 | INFO     | time since job start (3518s) is within the limit (172800.0s)
[2025-10-14 00:55:57] 2025-10-14 04:55:20,959 | INFO     | monitor loop #248: job 0:6832635185 is in state 'finished'
[2025-10-14 00:55:57] 2025-10-14 04:55:20,959 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 00:55:57] 2025-10-14 04:55:22,777 | INFO     | time since job start (3520s) is within the limit (172800.0s)
[2025-10-14 00:55:57] 2025-10-14 04:55:23,462 | INFO     | monitor loop #249: job 0:6832635185 is in state 'finished'
[2025-10-14 00:55:57] 2025-10-14 04:55:23,462 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 00:55:57] 2025-10-14 04:55:24,028 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-14 00:55:57] 2025-10-14 04:55:24,035 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.555210937499
[2025-10-14 00:55:57] 2025-10-14 04:55:24,052 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6832635185/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 00:55:57] 2025-10-14 04:55:24,052 | INFO     | extracted standard info from prmon json
[2025-10-14 00:55:57] 2025-10-14 04:55:24,052 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 00:55:57] 2025-10-14 04:55:24,052 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 00:55:57] 2025-10-14 04:55:24,053 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 00:55:57] 2025-10-14 04:55:24,053 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 00:55:57] 2025-10-14 04:55:24,054 | INFO     | fitting pss+swap vs Time
[2025-10-14 00:55:57] 2025-10-14 04:55:24,054 | INFO     | sum of square deviations: 38744912.5
[2025-10-14 00:55:57] 2025-10-14 04:55:24,054 | INFO     | sum of deviations: -1370219484.5
[2025-10-14 00:55:57] 2025-10-14 04:55:24,056 | INFO     | mean x: 1760416064.5
[2025-10-14 00:55:57] 2025-10-14 04:55:24,056 | INFO     | mean y: 2595362.22
[2025-10-14 00:55:57] 2025-10-14 04:55:24,056 | INFO     | -- intersect: 62259966375.890724
[2025-10-14 00:55:57] 2025-10-14 04:55:24,056 | INFO     | intersect: 62259966375.890724
[2025-10-14 00:55:57] 2025-10-14 04:55:24,056 | INFO     | chi2: 0.06838365222337742
[2025-10-14 00:55:57] 2025-10-14 04:55:24,056 | INFO     | -- intersect: 62259966375.890724
[2025-10-14 00:55:57] 2025-10-14 04:55:24,056 | INFO     | current memory leak: -35.37 B/s (using 50 data points, chi2=0.07)
[2025-10-14 00:55:57] 2025-10-14 04:55:24,057 | INFO     | could have reported an average CPU frequency of 3796 MHz (5 samples)
[2025-10-14 00:55:57] 2025-10-14 04:55:24,057 | INFO     | ..............................
[2025-10-14 00:55:57] 2025-10-14 04:55:24,057 | INFO     | . Timing measurements:
[2025-10-14 00:55:57] 2025-10-14 04:55:24,057 | INFO     | . get job = 0 s
[2025-10-14 00:55:57] 2025-10-14 04:55:24,057 | INFO     | . initial setup = 3 s
[2025-10-14 00:55:57] 2025-10-14 04:55:24,057 | INFO     | . payload setup = 18 s
[2025-10-14 00:55:57] 2025-10-14 04:55:24,057 | INFO     | . stage-in = 0 s
[2025-10-14 00:55:57] 2025-10-14 04:55:24,057 | INFO     | . payload execution = 3463 s
[2025-10-14 00:55:57] 2025-10-14 04:55:24,057 | INFO     | . stage-out = 0 s
[2025-10-14 00:55:57] 2025-10-14 04:55:24,057 | INFO     | . log creation = 0 s
[2025-10-14 00:55:57] 2025-10-14 04:55:24,057 | INFO     | ..............................
[2025-10-14 00:55:57] 2025-10-14 04:55:24,134 | INFO     | 
[2025-10-14 00:55:57] 2025-10-14 04:55:24,134 | INFO     | job summary report
[2025-10-14 00:55:57] 2025-10-14 04:55:24,134 | INFO     | --------------------------------------------------
[2025-10-14 00:55:57] 2025-10-14 04:55:24,134 | INFO     | PanDA job id: 6832635185
[2025-10-14 00:55:57] 2025-10-14 04:55:24,134 | INFO     | task id: 46376905
[2025-10-14 00:55:57] 2025-10-14 04:55:24,135 | INFO     | errors: (none)
[2025-10-14 00:55:57] 2025-10-14 04:55:24,135 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 00:55:57] 2025-10-14 04:55:24,135 | INFO     | pilot state: finished 
[2025-10-14 00:55:57] 2025-10-14 04:55:24,135 | INFO     | transexitcode: 0
[2025-10-14 00:55:57] 2025-10-14 04:55:24,135 | INFO     | exeerrorcode: 0
[2025-10-14 00:55:57] 2025-10-14 04:55:24,135 | INFO     | exeerrordiag: 
[2025-10-14 00:55:57] 2025-10-14 04:55:24,135 | INFO     | exitcode: 0
[2025-10-14 00:55:57] 2025-10-14 04:55:24,135 | INFO     | exitmsg: OK
[2025-10-14 00:55:57] 2025-10-14 04:55:24,135 | INFO     | cpuconsumptiontime: 20819 s
[2025-10-14 00:55:57] 2025-10-14 04:55:24,135 | INFO     | nevents: 400
[2025-10-14 00:55:57] 2025-10-14 04:55:24,135 | INFO     | neventsw: 0
[2025-10-14 00:55:57] 2025-10-14 04:55:24,135 | INFO     | pid: 1234609
[2025-10-14 00:55:57] 2025-10-14 04:55:24,135 | INFO     | pgrp: 1234609
[2025-10-14 00:55:57] 2025-10-14 04:55:24,135 | INFO     | corecount: 9
[2025-10-14 00:55:57] 2025-10-14 04:55:24,135 | INFO     | event service: False
[2025-10-14 00:55:57] 2025-10-14 04:55:24,135 | INFO     | sizes: {0: 2348593, 1: 2348848, 11: 2348848, 12: 2349138, 22: 2349166, 3485: 2374911, 3486: 2384092, 3488: 2384092, 3493: 2384318}
[2025-10-14 00:55:57] 2025-10-14 04:55:24,135 | INFO     | --------------------------------------------------
[2025-10-14 00:55:57] 2025-10-14 04:55:24,135 | INFO     | 
[2025-10-14 00:55:57] 2025-10-14 04:55:24,136 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-14 00:55:57] 2025-10-14 04:55:24,158 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 00:55:57] 2025-10-14 04:55:24,158 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 00:55:57] 2025-10-14 04:55:24,159 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 00:55:57] 2025-10-14 04:55:24,159 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 00:55:57] 2025-10-14 04:55:24,159 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 00:55:57] 2025-10-14 04:55:24,159 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 00:55:57] 2025-10-14 04:55:24,159 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 00:55:57] 2025-10-14 04:55:24,159 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 00:55:57] 2025-10-14 04:55:24,159 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 00:55:57] 2025-10-14 04:55:24,159 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 00:55:57] 2025-10-14 04:55:24,159 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 00:55:57] 2025-10-14 04:55:24,159 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 00:55:57] 2025-10-14 04:55:24,159 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 00:55:57] 2025-10-14 04:55:24,159 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 00:55:57] 2025-10-14 04:55:24,159 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 00:55:57] 2025-10-14 04:55:24,159 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 00:55:57] 2025-10-14 04:55:24,159 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 00:55:57] 2025-10-14 04:55:24,159 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 00:55:57] 2025-10-14 04:55:24,159 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 00:55:57] 2025-10-14 04:55:24,159 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 00:55:57] 2025-10-14 04:55:24,159 | INFO     | job 6832635185 has completed (purged errors)
[2025-10-14 00:55:57] 2025-10-14 04:55:24,160 | INFO     | overall cleanup function is called
[2025-10-14 00:55:57] 2025-10-14 04:55:24,345 | INFO     | PID=1226694 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 00:55:57] 2025-10-14 04:55:24,345 | INFO     | .. there are 27 such processes running
[2025-10-14 00:55:57] 2025-10-14 04:55:25,168 | INFO     | --- collectZombieJob: --- 10, [1234609]
[2025-10-14 00:55:57] 2025-10-14 04:55:25,168 | INFO     | zombie collector waiting for pid 1234609
[2025-10-14 00:55:57] 2025-10-14 04:55:25,168 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 00:55:57] 2025-10-14 04:55:25,168 | INFO     | collected zombie processes
[2025-10-14 00:55:57] 2025-10-14 04:55:25,168 | INFO     | will attempt to kill all subprocesses of pid=1234609
[2025-10-14 00:55:57] 2025-10-14 04:55:25,498 | INFO     | process IDs to be killed: [1234609] (in reverse order)
[2025-10-14 00:55:57] 2025-10-14 04:55:25,628 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 00:55:57] 2025-10-14 04:55:25,628 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 00:55:57] 2025-10-14 04:55:25,649 | INFO     | did not find any defunct processes belonging to 1234609
[2025-10-14 00:55:57] 2025-10-14 04:55:25,670 | INFO     | did not find any defunct processes belonging to 1234609
[2025-10-14 00:55:57] 2025-10-14 04:55:25,670 | INFO     | ready for new job
[2025-10-14 00:55:57] 2025-10-14 04:55:25,671 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 00:55:57] 2025-10-14 04:55:25,672 | INFO     | ***************************************
[2025-10-14 00:55:57] 2025-10-14 04:55:25,672 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-14 00:55:57] 2025-10-14 04:55:25,672 | INFO     | ***************************************
[2025-10-14 00:55:57] 2025-10-14 04:55:25,672 | INFO     | 
[2025-10-14 00:55:57] 2025-10-14 04:55:25,677 | INFO     | architecture information:
[2025-10-14 00:55:57] 2025-10-14 04:55:25,677 | INFO     | executing command: cat /etc/os-release
[2025-10-14 00:55:57] 2025-10-14 04:55:25,692 | INFO     | cat /etc/os-release:
[2025-10-14 00:55:57] NAME="CentOS Linux"
[2025-10-14 00:55:57] VERSION="7 (Core)"
[2025-10-14 00:55:57] ID="centos"
[2025-10-14 00:55:57] ID_LIKE="rhel fedora"
[2025-10-14 00:55:57] VERSION_ID="7"
[2025-10-14 00:55:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 00:55:57] ANSI_COLOR="0;31"
[2025-10-14 00:55:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 00:55:57] HOME_URL="https://www.centos.org/"
[2025-10-14 00:55:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 00:55:57] 
[2025-10-14 00:55:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 00:55:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 00:55:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 00:55:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 00:55:57] 
[2025-10-14 00:55:57] 2025-10-14 04:55:25,692 | INFO     | ***************************************
[2025-10-14 00:55:57] 2025-10-14 04:55:26,195 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-14 00:55:57] 2025-10-14 04:55:26,208 | INFO     | sufficient remaining disk space (173752188928 B)
[2025-10-14 00:55:57] 2025-10-14 04:55:26,209 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 00:55:57] 2025-10-14 04:55:26,209 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 00:55:57] 2025-10-14 04:55:26,209 | INFO     | update_server=False
[2025-10-14 00:55:57] 2025-10-14 04:55:26,209 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 00:55:57] 2025-10-14 04:55:26,209 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 00:55:57] 2025-10-14 04:55:26,588 | INFO     | all data control threads have been joined
[2025-10-14 00:55:57] 2025-10-14 04:55:26,930 | INFO     | all payload control threads have been joined
[2025-10-14 00:55:57] 2025-10-14 04:55:26,969 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 00:55:57] 2025-10-14 04:55:26,970 | INFO     | aborting loop
[2025-10-14 00:55:57] 2025-10-14 04:55:27,214 | INFO     | [job] retrieve thread has finished
[2025-10-14 00:55:57] 2025-10-14 04:55:27,362 | INFO     | [payload] failed_post thread has finished
[2025-10-14 00:55:57] 2025-10-14 04:55:27,512 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 00:55:57] 2025-10-14 04:55:27,519 | INFO     | all job control threads have been joined
[2025-10-14 00:55:57] 2025-10-14 04:55:27,594 | INFO     | [data] control thread has finished
[2025-10-14 00:55:57] 2025-10-14 04:55:27,759 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 00:55:57] 2025-10-14 04:55:27,936 | INFO     | [payload] control thread has finished
[2025-10-14 00:55:57] 2025-10-14 04:55:27,975 | INFO     | [job] job monitor thread has finished
[2025-10-14 00:55:57] 2025-10-14 04:55:28,152 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 00:55:57] 2025-10-14 04:55:28,152 | INFO     | [job] validate thread has finished
[2025-10-14 00:55:57] 2025-10-14 04:55:28,215 | INFO     | [data] copytool_out thread has finished
[2025-10-14 00:55:57] 2025-10-14 04:55:28,524 | INFO     | [job] control thread has finished
[2025-10-14 00:55:57] 2025-10-14 04:55:28,572 | INFO     | [data] copytool_in thread has finished
[2025-10-14 00:55:57] 2025-10-14 04:55:28,683 | INFO     | [payload] validate_post thread has finished
[2025-10-14 00:55:57] 2025-10-14 04:55:29,129 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 00:55:57] 2025-10-14 04:55:29,489 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 00:55:57] 2025-10-14 04:55:30,135 | INFO     | [job] queue monitor thread has finished
[2025-10-14 00:55:57] 2025-10-14 04:55:33,496 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 00:55:57] 2025-10-14 04:55:36,767 | INFO     | job.realtimelogging is not enabled
[2025-10-14 00:55:57] 2025-10-14 04:55:37,773 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 00:55:57] 2025-10-14 04:55:47,641 | INFO     | [monitor] cgroup control has ended
[2025-10-14 00:55:57] 2025-10-14 04:55:48,177 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140650725275456)>', '<ExcThread(monitor, started 140650221651712)>']
[2025-10-14 00:55:57] 2025-10-14 04:55:53,203 | INFO     | all workflow threads have been joined
[2025-10-14 00:55:57] 2025-10-14 04:55:53,203 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 00:55:57] 2025-10-14 04:55:53,203 | INFO     | traces error code: 0
[2025-10-14 00:55:57] 2025-10-14 04:55:53,203 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 00:55:57] 2025-10-14 04:55:56,898 | INFO     | PID=1226694 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 00:55:57] 2025-10-14 04:55:56,899 | INFO     | .. there are 27 such processes running
[2025-10-14 00:55:57] 2025-10-14 04:55:56,899 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 00:55:57] 2025-10-14 04:55:56,899 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 00:55:57] 2025-10-14 04:55:56,899 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 00:55:57] 2025-10-14 04:55:56,899 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 00:55:57] 2025-10-14 04:55:56,899 | INFO     | [monitor] control thread has ended
[2025-10-14 00:55:57] 2025-10-14 04:55:57,142 [wrapper] ==== pilot stdout END ====
[2025-10-14 00:55:57] 2025-10-14 04:55:57,145 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 00:55:57] 2025-10-14 04:55:57,148 [wrapper] pilotpid: 1226694
[2025-10-14 00:55:57] 2025-10-14 04:55:57,153 [wrapper] Pilot exit status: 0
[2025-10-14 00:55:57] 2025-10-14 04:55:57,167 [wrapper] pandaids: 6832635185
[2025-10-14 00:55:57] 2025-10-14 04:55:57,266 [wrapper] cleanup supervisor_pilot 1376403 1226695
[2025-10-14 00:55:57] 2025-10-14 04:55:57,269 [wrapper] Test setup, not cleaning
[2025-10-14 00:55:57] 2025-10-14 04:55:57,272 [wrapper] apfmon messages muted
[2025-10-14 00:55:57] 2025-10-14 04:55:57,275 [wrapper] ==== wrapper stdout END ====
[2025-10-14 00:55:57] 2025-10-14 04:55:57,278 [wrapper] ==== wrapper stderr END ====
[2025-10-14 00:55:57]  *** Error codes and diagnostics ***
[2025-10-14 00:55:57]     "exeErrorCode": 0,
[2025-10-14 00:55:57]     "exeErrorDiag": "",
[2025-10-14 00:55:57]     "pilotErrorCode": 0,
[2025-10-14 00:55:57]     "pilotErrorDiag": "",
[2025-10-14 00:55:57]  *** Listing of results directory ***
[2025-10-14 00:55:57] total 389284
[2025-10-14 00:55:57] -rw-r--r--. 1 boincer umatlas    552446 Oct  6 06:49 pilot3.tar.gz
[2025-10-14 00:55:57] -rw-r--r--. 1 boincer umatlas      5112 Oct  6 07:18 queuedata.json
[2025-10-14 00:55:57] -rwx------. 1 boincer umatlas     36292 Oct  6 07:19 runpilot2-wrapper.sh
[2025-10-14 00:55:57] -rw-r--r--. 1 boincer umatlas       100 Oct 13 23:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 00:55:57] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 23:56 run_atlas
[2025-10-14 00:55:57] -rw-r--r--. 1 boincer umatlas       105 Oct 13 23:56 job.xml
[2025-10-14 00:55:57] -rw-r--r--. 2 boincer umatlas 213926738 Oct 13 23:56 EVNT.46376901._004090.pool.root.1
[2025-10-14 00:55:57] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 23:56 start_atlas.sh
[2025-10-14 00:55:57] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 23:56 shared
[2025-10-14 00:55:57] -rw-r--r--. 2 boincer umatlas    565606 Oct 13 23:56 input.tar.gz
[2025-10-14 00:55:57] -rw-r--r--. 1 boincer umatlas         0 Oct 13 23:56 boinc_lockfile
[2025-10-14 00:55:57] -rw-r--r--. 1 boincer umatlas      2521 Oct 13 23:56 pandaJob.out
[2025-10-14 00:55:57] -rw-------. 1 boincer umatlas    972807 Oct 13 23:56 agis_schedconf.cvmfs.json
[2025-10-14 00:55:57] -rw-------. 1 boincer umatlas   1560580 Oct 13 23:56 agis_ddmendpoints.agis.ALL.json
[2025-10-14 00:55:57] drwx------. 4 boincer umatlas      4096 Oct 13 23:56 pilot3
[2025-10-14 00:55:57] -rw-r--r--. 1 boincer umatlas      7173 Oct 14 00:48 init_data.xml
[2025-10-14 00:55:57] -rw-------. 1 boincer umatlas 179157655 Oct 14 00:54 HITS.46376905._110310.pool.root.1
[2025-10-14 00:55:57] -rw-r--r--. 1 boincer umatlas       529 Oct 14 00:54 boinc_task_state.xml
[2025-10-14 00:55:57] -rw-------. 1 boincer umatlas      1049 Oct 14 00:55 memory_monitor_summary.json
[2025-10-14 00:55:57] -rw-------. 1 boincer umatlas    317258 Oct 14 00:55 log.46376905._110310.job.log.tgz.1
[2025-10-14 00:55:57] -rw-------. 1 boincer umatlas      7807 Oct 14 00:55 heartbeat.json
[2025-10-14 00:55:57] -rw-r--r--. 1 boincer umatlas      8192 Oct 14 00:55 boinc_mmap_file
[2025-10-14 00:55:57] -rw-r--r--. 1 boincer umatlas        27 Oct 14 00:55 wrapper_checkpoint.txt
[2025-10-14 00:55:57] -rw-------. 1 boincer umatlas        95 Oct 14 00:55 pilot_heartbeat.json
[2025-10-14 00:55:57] -rw-------. 1 boincer umatlas       823 Oct 14 00:55 pilotlog.txt
[2025-10-14 00:55:57] -rw-------. 1 boincer umatlas    509029 Oct 14 00:55 log.46376905._110310.job.log.1
[2025-10-14 00:55:57] -rw-------. 1 boincer umatlas       357 Oct 14 00:55 output.list
[2025-10-14 00:55:57] -rw-r--r--. 1 boincer umatlas       620 Oct 14 00:55 runtime_log
[2025-10-14 00:55:57] -rw-------. 1 boincer umatlas    849920 Oct 14 00:55 result.tar.gz
[2025-10-14 00:55:57] -rw-r--r--. 1 boincer umatlas      8703 Oct 14 00:55 runtime_log.err
[2025-10-14 00:55:57] -rw-------. 1 boincer umatlas       657 Oct 14 00:55 nVgNDmlQyP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPKTNDmt6BfCo.diag
[2025-10-14 00:55:57] -rw-r--r--. 1 boincer umatlas     22089 Oct 14 00:55 stderr.txt
[2025-10-14 00:55:57] HITS file was successfully produced:
[2025-10-14 00:55:57] -rw-------. 1 boincer umatlas 179157655 Oct 14 00:54 shared/HITS.pool.root.1
[2025-10-14 00:55:57]  *** Contents of shared directory: ***
[2025-10-14 00:55:57] total 385284
[2025-10-14 00:55:57] -rw-r--r--. 2 boincer umatlas 213926738 Oct 13 23:56 ATLAS.root_0
[2025-10-14 00:55:57] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 23:56 start_atlas.sh
[2025-10-14 00:55:57] -rw-r--r--. 2 boincer umatlas    565606 Oct 13 23:56 input.tar.gz
[2025-10-14 00:55:57] -rw-------. 1 boincer umatlas 179157655 Oct 14 00:54 HITS.pool.root.1
[2025-10-14 00:55:57] -rw-------. 1 boincer umatlas    849920 Oct 14 00:55 result.tar.gz
00:55:58 (1221906): run_atlas exited; CPU time 20893.928463
00:55:58 (1221906): called boinc_finish(0)

</stderr_txt>
]]>

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