Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
20:38:47 (2540763): wrapper (7.7.26015): starting
20:38:47 (2540763): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 20:38:47] Arguments: --nthreads 4
[2025-10-13 20:38:47] Threads: 4
[2025-10-13 20:38:47] Checking for CVMFS
[2025-10-13 20:38:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 20:38:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 20:38:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 20:38:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 20:38:50] 2.11.3.0 2540973 0 24992 151681 3 1 3035606 4096001 0 130560 0 0 0.000 1291 890 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 20:38:50] CVMFS is ok
[2025-10-13 20:38:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 20:38:50] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 20:38:50] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 20:38:50] Further information can be found at the LHC@home message board.
[2025-10-13 20:38:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 20:38:50] Checking for apptainer binary...
[2025-10-13 20:38:50] apptainer is not installed, using version from CVMFS
[2025-10-13 20:38:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 20:38:50] officedc-System-Product-Name
[2025-10-13 20:38:50] apptainer works
[2025-10-13 20:38:50] Set ATHENA_PROC_NUMBER=4
[2025-10-13 20:38:50] Set ATHENA_CORE_NUMBER=4
[2025-10-13 20:38:50] Starting ATLAS job with PandaID=6837707369
[2025-10-13 20:38:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc3/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 21:49:15]  *** The last 200 lines of the pilot log: ***
[2025-10-13 21:49:15]  replicas=None
[2025-10-13 21:49:15]  scope=mc23_13p6TeV
[2025-10-13 21:49:15]  status=None
[2025-10-13 21:49:15]  status_code=0
[2025-10-13 21:49:15]  storage_token=
[2025-10-13 21:49:15]  surl=/var/lib/boinc3/slots/2/PanDA_Pilot-6837707369/log.46676269._043619.job.log.tgz.1
[2025-10-13 21:49:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/26/74/log.46676269._043619.job.log.tgz.1
[2025-10-13 21:49:15]  workdir=None
[2025-10-13 21:49:15] ]
[2025-10-13 21:49:15] 2025-10-14 03:48:32,322 | INFO     | transferring file log.46676269._043619.job.log.tgz.1 from /var/lib/boinc3/slots/2/PanDA_Pilot-6837707369/log.46676269._043619.job.log.tgz.1 to /var/lib/boinc3/slot
[2025-10-13 21:49:15] 2025-10-14 03:48:32,322 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc3/slots/2/PanDA_Pilot-6837707369/log.46676269._043619.job.log.tgz.1 /var/lib/boinc3/slots/2/log.46676269._043619.j
[2025-10-13 21:49:15] 2025-10-14 03:48:32,332 | INFO     | adding to output.list: log.46676269._043619.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/26/74/log.46676269._043619.job.log.tg
[2025-10-13 21:49:15] 2025-10-14 03:48:32,333 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 21:49:15] 2025-10-14 03:48:32,333 | INFO     | summary of transferred files:
[2025-10-13 21:49:15] 2025-10-14 03:48:32,333 | INFO     |  -- lfn=log.46676269._043619.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 21:49:15] 2025-10-14 03:48:32,333 | INFO     | stage-out finished correctly
[2025-10-13 21:49:15] 2025-10-14 03:48:32,366 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 21:49:15] 2025-10-14 03:48:32,396 | INFO     | job 6837707369 has state=finished
[2025-10-13 21:49:15] 2025-10-14 03:48:32,397 | INFO     | preparing for final server update for job 6837707369 in state='finished'
[2025-10-13 21:49:15] 2025-10-14 03:48:32,397 | INFO     | this job has now completed (state=finished)
[2025-10-13 21:49:15] 2025-10-14 03:48:32,397 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 21:49:15] 2025-10-14 03:48:32,397 | INFO     | log transfer has been attempted: DONE
[2025-10-13 21:49:15] 2025-10-14 03:48:32,397 | INFO     | job 6837707369 has finished - writing final server update
[2025-10-13 21:49:15] 2025-10-14 03:48:32,397 | INFO     | total number of processed events: 400 (read)
[2025-10-13 21:49:15] 2025-10-14 03:48:32,398 | INFO     | executing command: lscpu
[2025-10-13 21:49:15] 2025-10-14 03:48:32,419 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 21:49:15] 2025-10-14 03:48:32,438 | INFO     | time since job start (4168s) is within the limit (172800.0s)
[2025-10-13 21:49:15] 2025-10-14 03:48:33,873 | WARNING  | process 2551912 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 21:49:15] 2025-10-14 03:48:33,873 | INFO     | using path: /var/lib/boinc3/slots/2/PanDA_Pilot-6837707369/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 21:49:15] 2025-10-14 03:48:33,935 | INFO     | number of running child processes to parent process 2551912: 1
[2025-10-13 21:49:15] 2025-10-14 03:48:33,935 | INFO     | maximum number of monitored processes: 6
[2025-10-13 21:49:15] 2025-10-14 03:48:34,444 | INFO     | time since job start (4170s) is within the limit (172800.0s)
[2025-10-13 21:49:15] 2025-10-14 03:48:36,438 | INFO     | monitor loop #319: job 0:6837707369 is in state 'finished'
[2025-10-13 21:49:15] 2025-10-14 03:48:36,438 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:49:15] 2025-10-14 03:48:36,450 | INFO     | time since job start (4172s) is within the limit (172800.0s)
[2025-10-13 21:49:15] 2025-10-14 03:48:37,211 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 21:49:15] 2025-10-14 03:48:37,213 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3717.7800625
[2025-10-13 21:49:15] 2025-10-14 03:48:37,216 | INFO     | using path: /var/lib/boinc3/slots/2/PanDA_Pilot-6837707369/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 21:49:15] 2025-10-14 03:48:37,216 | INFO     | extracted standard info from prmon json
[2025-10-13 21:49:15] 2025-10-14 03:48:37,216 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 21:49:15] 2025-10-14 03:48:37,216 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 21:49:15] 2025-10-14 03:48:37,216 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 21:49:15] 2025-10-14 03:48:37,216 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 21:49:15] 2025-10-14 03:48:37,217 | INFO     | fitting pss+swap vs Time
[2025-10-13 21:49:15] 2025-10-14 03:48:37,217 | INFO     | sum of square deviations: 70364110.0
[2025-10-13 21:49:15] 2025-10-14 03:48:37,217 | INFO     | sum of deviations: -11718318136.0
[2025-10-13 21:49:15] 2025-10-14 03:48:37,217 | INFO     | mean x: 1760411697.0
[2025-10-13 21:49:15] 2025-10-14 03:48:37,217 | INFO     | mean y: 2572148.5901639345
[2025-10-13 21:49:15] 2025-10-14 03:48:37,217 | INFO     | -- intersect: 293178515335.8434
[2025-10-13 21:49:15] 2025-10-14 03:48:37,217 | INFO     | intersect: 293178515335.8434
[2025-10-13 21:49:15] 2025-10-14 03:48:37,218 | INFO     | chi2: 0.11138455598178307
[2025-10-13 21:49:15] 2025-10-14 03:48:37,218 | INFO     | -- intersect: 293178515335.8434
[2025-10-13 21:49:15] 2025-10-14 03:48:37,218 | INFO     | current memory leak: -166.54 B/s (using 61 data points, chi2=0.11)
[2025-10-13 21:49:15] 2025-10-14 03:48:37,218 | INFO     | could have reported an average CPU frequency of 3755 MHz (6 samples)
[2025-10-13 21:49:15] 2025-10-14 03:48:37,218 | INFO     | ..............................
[2025-10-13 21:49:15] 2025-10-14 03:48:37,218 | INFO     | . Timing measurements:
[2025-10-13 21:49:15] 2025-10-14 03:48:37,218 | INFO     | . get job = 0 s
[2025-10-13 21:49:15] 2025-10-14 03:48:37,218 | INFO     | . initial setup = 3 s
[2025-10-13 21:49:15] 2025-10-14 03:48:37,218 | INFO     | . payload setup = 2 s
[2025-10-13 21:49:15] 2025-10-14 03:48:37,218 | INFO     | . stage-in = 0 s
[2025-10-13 21:49:15] 2025-10-14 03:48:37,218 | INFO     | . payload execution = 4147 s
[2025-10-13 21:49:15] 2025-10-14 03:48:37,218 | INFO     | . stage-out = 0 s
[2025-10-13 21:49:15] 2025-10-14 03:48:37,218 | INFO     | . log creation = 0 s
[2025-10-13 21:49:15] 2025-10-14 03:48:37,218 | INFO     | ..............................
[2025-10-13 21:49:15] 2025-10-14 03:48:37,257 | INFO     | 
[2025-10-13 21:49:15] 2025-10-14 03:48:37,258 | INFO     | job summary report
[2025-10-13 21:49:15] 2025-10-14 03:48:37,258 | INFO     | --------------------------------------------------
[2025-10-13 21:49:15] 2025-10-14 03:48:37,258 | INFO     | PanDA job id: 6837707369
[2025-10-13 21:49:15] 2025-10-14 03:48:37,258 | INFO     | task id: 46676269
[2025-10-13 21:49:15] 2025-10-14 03:48:37,258 | INFO     | errors: (none)
[2025-10-13 21:49:15] 2025-10-14 03:48:37,258 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 21:49:15] 2025-10-14 03:48:37,258 | INFO     | pilot state: finished 
[2025-10-13 21:49:15] 2025-10-14 03:48:37,258 | INFO     | transexitcode: 0
[2025-10-13 21:49:15] 2025-10-14 03:48:37,258 | INFO     | exeerrorcode: 0
[2025-10-13 21:49:15] 2025-10-14 03:48:37,258 | INFO     | exeerrordiag: 
[2025-10-13 21:49:15] 2025-10-14 03:48:37,258 | INFO     | exitcode: 0
[2025-10-13 21:49:15] 2025-10-14 03:48:37,258 | INFO     | exitmsg: OK
[2025-10-13 21:49:15] 2025-10-14 03:48:37,258 | INFO     | cpuconsumptiontime: 16142 s
[2025-10-13 21:49:15] 2025-10-14 03:48:37,258 | INFO     | nevents: 400
[2025-10-13 21:49:15] 2025-10-14 03:48:37,258 | INFO     | neventsw: 0
[2025-10-13 21:49:15] 2025-10-14 03:48:37,258 | INFO     | pid: 2551912
[2025-10-13 21:49:15] 2025-10-14 03:48:37,258 | INFO     | pgrp: 2551912
[2025-10-13 21:49:15] 2025-10-14 03:48:37,258 | INFO     | corecount: 4
[2025-10-13 21:49:15] 2025-10-14 03:48:37,258 | INFO     | event service: False
[2025-10-13 21:49:15] 2025-10-14 03:48:37,258 | INFO     | sizes: {0: 2348858, 2: 2349120, 11: 2349148, 4154: 2375218, 4156: 2384274, 4161: 2384412}
[2025-10-13 21:49:15] 2025-10-14 03:48:37,258 | INFO     | --------------------------------------------------
[2025-10-13 21:49:15] 2025-10-14 03:48:37,258 | INFO     | 
[2025-10-13 21:49:15] 2025-10-14 03:48:37,259 | INFO     | executing command: ls -lF /var/lib/boinc3/slots/2
[2025-10-13 21:49:15] 2025-10-14 03:48:37,273 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 21:49:15] 2025-10-14 03:48:37,273 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 21:49:15] 2025-10-14 03:48:37,273 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 21:49:15] 2025-10-14 03:48:37,273 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 21:49:15] 2025-10-14 03:48:37,273 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 21:49:15] 2025-10-14 03:48:37,273 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 21:49:15] 2025-10-14 03:48:37,273 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 21:49:15] 2025-10-14 03:48:37,274 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 21:49:15] 2025-10-14 03:48:37,274 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 21:49:15] 2025-10-14 03:48:37,274 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 21:49:15] 2025-10-14 03:48:37,274 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 21:49:15] 2025-10-14 03:48:37,274 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 21:49:15] 2025-10-14 03:48:37,274 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 21:49:15] 2025-10-14 03:48:37,274 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 21:49:15] 2025-10-14 03:48:37,274 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 21:49:15] 2025-10-14 03:48:37,274 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 21:49:15] 2025-10-14 03:48:37,274 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 21:49:15] 2025-10-14 03:48:37,274 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 21:49:15] 2025-10-14 03:48:37,274 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 21:49:15] 2025-10-14 03:48:37,274 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 21:49:15] 2025-10-14 03:48:37,274 | INFO     | job 6837707369 has completed (purged errors)
[2025-10-13 21:49:15] 2025-10-14 03:48:37,274 | INFO     | overall cleanup function is called
[2025-10-13 21:49:15] 2025-10-14 03:48:38,278 | INFO     | --- collectZombieJob: --- 10, [2551912]
[2025-10-13 21:49:15] 2025-10-14 03:48:38,278 | INFO     | zombie collector waiting for pid 2551912
[2025-10-13 21:49:15] 2025-10-14 03:48:38,278 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 21:49:15] 2025-10-14 03:48:38,278 | INFO     | collected zombie processes
[2025-10-13 21:49:15] 2025-10-14 03:48:38,278 | INFO     | will attempt to kill all subprocesses of pid=2551912
[2025-10-13 21:49:15] 2025-10-14 03:48:38,344 | INFO     | process IDs to be killed: [2551912] (in reverse order)
[2025-10-13 21:49:15] 2025-10-14 03:48:38,375 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 21:49:15] 2025-10-14 03:48:38,375 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 21:49:15] 2025-10-14 03:48:38,378 | INFO     | did not find any defunct processes belonging to 2551912
[2025-10-13 21:49:15] 2025-10-14 03:48:38,380 | INFO     | did not find any defunct processes belonging to 2551912
[2025-10-13 21:49:15] 2025-10-14 03:48:38,380 | INFO     | ready for new job
[2025-10-13 21:49:15] 2025-10-14 03:48:38,380 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 21:49:15] 2025-10-14 03:48:38,381 | INFO     | ***************************************
[2025-10-13 21:49:15] 2025-10-14 03:48:38,381 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-13 21:49:15] 2025-10-14 03:48:38,381 | INFO     | ***************************************
[2025-10-13 21:49:15] 2025-10-14 03:48:38,381 | INFO     | 
[2025-10-13 21:49:15] 2025-10-14 03:48:38,382 | INFO     | architecture information:
[2025-10-13 21:49:15] 2025-10-14 03:48:38,382 | INFO     | executing command: cat /etc/os-release
[2025-10-13 21:49:15] 2025-10-14 03:48:38,390 | INFO     | cat /etc/os-release:
[2025-10-13 21:49:15] NAME="CentOS Linux"
[2025-10-13 21:49:15] VERSION="7 (Core)"
[2025-10-13 21:49:15] ID="centos"
[2025-10-13 21:49:15] ID_LIKE="rhel fedora"
[2025-10-13 21:49:15] VERSION_ID="7"
[2025-10-13 21:49:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 21:49:15] ANSI_COLOR="0;31"
[2025-10-13 21:49:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 21:49:15] HOME_URL="https://www.centos.org/"
[2025-10-13 21:49:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 21:49:15] 
[2025-10-13 21:49:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 21:49:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 21:49:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 21:49:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 21:49:15] 
[2025-10-13 21:49:15] 2025-10-14 03:48:38,390 | INFO     | ***************************************
[2025-10-13 21:49:15] 2025-10-14 03:48:38,892 | INFO     | executing command: df -mP /var/lib/boinc3/slots/2
[2025-10-13 21:49:15] 2025-10-14 03:48:38,904 | INFO     | sufficient remaining disk space (380302786560 B)
[2025-10-13 21:49:15] 2025-10-14 03:48:38,904 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 21:49:15] 2025-10-14 03:48:38,905 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 21:49:15] 2025-10-14 03:48:38,905 | INFO     | update_server=False
[2025-10-13 21:49:15] 2025-10-14 03:48:38,905 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 21:49:15] 2025-10-14 03:48:38,905 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:49:15] 2025-10-14 03:48:38,905 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 21:49:15] 2025-10-14 03:48:38,941 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 21:49:15] 2025-10-14 03:48:38,941 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 21:49:15] 2025-10-14 03:48:38,941 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:49:15] 2025-10-14 03:48:38,942 | INFO     | will abort loop
[2025-10-13 21:49:15] 2025-10-14 03:48:38,984 | INFO     | all payload control threads have been joined
[2025-10-13 21:49:15] 2025-10-14 03:48:39,261 | INFO     | all data control threads have been joined
[2025-10-13 21:49:15] 2025-10-14 03:48:39,910 | INFO     | [job] queue monitor thread has finished
[2025-10-13 21:49:15] 2025-10-14 03:48:39,910 | INFO     | [job] retrieve thread has finished
[2025-10-13 21:49:15] 2025-10-14 03:48:39,942 | INFO     | [job] job monitor thread has finished
[2025-10-13 21:49:15] 2025-10-14 03:48:39,990 | INFO     | [payload] control thread has finished
[2025-10-13 21:49:15] 2025-10-14 03:48:40,043 | INFO     | [data] copytool_in thread has finished
[2025-10-13 21:49:15] 2025-10-14 03:48:40,267 | INFO     | [data] control thread has finished
[2025-10-13 21:49:15] 2025-10-14 03:48:40,270 | INFO     | all job control threads have been joined
[2025-10-13 21:49:15] 2025-10-14 03:48:40,313 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 21:49:15] 2025-10-14 03:48:40,376 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 21:49:15] 2025-10-14 03:48:40,648 | INFO     | [payload] failed_post thread has finished
[2025-10-13 21:49:15] 2025-10-14 03:48:40,702 | INFO     | [job] validate thread has finished
[2025-10-13 21:49:15] 2025-10-14 03:48:40,753 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 21:49:15] 2025-10-14 03:48:40,892 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 21:49:15] 2025-10-14 03:48:41,108 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 21:49:15] 2025-10-14 03:48:41,157 | INFO     | [payload] validate_post thread has finished
[2025-10-13 21:49:15] 2025-10-14 03:48:41,274 | INFO     | [job] control thread has finished
[2025-10-13 21:49:15] 2025-10-14 03:48:42,382 | INFO     | [data] copytool_out thread has finished
[2025-10-13 21:49:15] 2025-10-14 03:48:42,910 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 21:49:15] 2025-10-14 03:49:09,052 | INFO     | [monitor] cgroup control has ended
[2025-10-13 21:49:15] 2025-10-14 03:49:09,619 | INFO     | PID=2545222 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 21:49:15] 2025-10-14 03:49:09,619 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 21:49:15] 2025-10-14 03:49:09,619 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 21:49:15] 2025-10-14 03:49:09,619 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 21:49:15] 2025-10-14 03:49:10,569 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136113628174144)>', '<ExcThread(monitor, started 136112982963968)>']
[2025-10-13 21:49:15] 2025-10-14 03:49:10,624 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 21:49:15] 2025-10-14 03:49:10,624 | INFO     | [monitor] control thread has ended
[2025-10-13 21:49:15] 2025-10-14 03:49:15,576 | INFO     | all workflow threads have been joined
[2025-10-13 21:49:15] 2025-10-14 03:49:15,579 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 21:49:15] 2025-10-14 03:49:15,579 | INFO     | traces error code: 0
[2025-10-13 21:49:15] 2025-10-14 03:49:15,579 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 21:49:15] 2025-10-14 03:49:15,649 [wrapper] ==== pilot stdout END ====
[2025-10-13 21:49:15] 2025-10-14 03:49:15,650 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 21:49:15] 2025-10-14 03:49:15,651 [wrapper] pilotpid: 2545222
[2025-10-13 21:49:15] 2025-10-14 03:49:15,652 [wrapper] Pilot exit status: 0
[2025-10-13 21:49:15] 2025-10-14 03:49:15,657 [wrapper] pandaids: 6837707369
[2025-10-13 21:49:15] 2025-10-14 03:49:15,676 [wrapper] cleanup supervisor_pilot 2561496 2545223
[2025-10-13 21:49:15] 2025-10-14 03:49:15,677 [wrapper] Test setup, not cleaning
[2025-10-13 21:49:15] 2025-10-14 03:49:15,678 [wrapper] apfmon messages muted
[2025-10-13 21:49:15] 2025-10-14 03:49:15,679 [wrapper] ==== wrapper stdout END ====
[2025-10-13 21:49:15] 2025-10-14 03:49:15,681 [wrapper] ==== wrapper stderr END ====
[2025-10-13 21:49:15]  *** Error codes and diagnostics ***
[2025-10-13 21:49:15]     "exeErrorCode": 0,
[2025-10-13 21:49:15]     "exeErrorDiag": "",
[2025-10-13 21:49:15]     "pilotErrorCode": 0,
[2025-10-13 21:49:15]     "pilotErrorDiag": "",
[2025-10-13 21:49:15]  *** Listing of results directory ***
[2025-10-13 21:49:15] total 415728
[2025-10-13 21:49:15] -rw-r--r-- 1 boinc boinc    563267 Oct  7 01:02 pilot3.tar.gz
[2025-10-13 21:49:15] -rw-r--r-- 1 boinc boinc      5112 Oct 10 13:08 queuedata.json
[2025-10-13 21:49:15] -rwx------ 1 boinc boinc     36292 Oct 10 13:10 runpilot2-wrapper.sh
[2025-10-13 21:49:15] -rw-rw-r-- 1 boinc boinc       100 Oct 13 20:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 21:49:15] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 20:38 run_atlas
[2025-10-13 21:49:15] -rw-rw-r-- 1 boinc boinc       105 Oct 13 20:38 job.xml
[2025-10-13 21:49:15] -rw-rw-r-- 1 boinc boinc      9753 Oct 13 20:38 init_data.xml
[2025-10-13 21:49:15] -rw-r--r-- 2 boinc boinc 221622776 Oct 13 20:38 EVNT.46676267._001766.pool.root.1
[2025-10-13 21:49:15] -rw-r--r-- 2 boinc boinc     15120 Oct 13 20:38 start_atlas.sh
[2025-10-13 21:49:15] drwxrwx--x 2 boinc boinc      4096 Oct 13 20:38 shared
[2025-10-13 21:49:15] -rw-r--r-- 2 boinc boinc    576713 Oct 13 20:38 input.tar.gz
[2025-10-13 21:49:15] -rw-rw-r-- 1 boinc boinc         0 Oct 13 20:38 boinc_lockfile
[2025-10-13 21:49:15] -rw-rw-r-- 1 boinc boinc      2550 Oct 13 20:38 pandaJob.out
[2025-10-13 21:49:15] -rw------- 1 boinc boinc    972807 Oct 13 20:39 agis_schedconf.cvmfs.json
[2025-10-13 21:49:15] -rw------- 1 boinc boinc   1560580 Oct 13 20:39 agis_ddmendpoints.agis.ALL.json
[2025-10-13 21:49:15] drwx------ 4 boinc boinc      4096 Oct 13 20:39 pilot3
[2025-10-13 21:49:15] -rw------- 1 boinc boinc 198427233 Oct 13 21:48 HITS.46676269._043619.pool.root.1
[2025-10-13 21:49:15] -rw------- 1 boinc boinc      1018 Oct 13 21:48 memory_monitor_summary.json
[2025-10-13 21:49:15] -rw------- 1 boinc boinc        95 Oct 13 21:48 pilot_heartbeat.json
[2025-10-13 21:49:15] -rw------- 1 boinc boinc    252491 Oct 13 21:48 log.46676269._043619.job.log.tgz.1
[2025-10-13 21:49:15] -rw-rw-r-- 1 boinc boinc       529 Oct 13 21:48 boinc_task_state.xml
[2025-10-13 21:49:15] -rw------- 1 boinc boinc      7777 Oct 13 21:48 heartbeat.json
[2025-10-13 21:49:15] -rw-rw-r-- 1 boinc boinc      8192 Oct 13 21:49 boinc_mmap_file
[2025-10-13 21:49:15] -rw-rw-r-- 1 boinc boinc        27 Oct 13 21:49 wrapper_checkpoint.txt
[2025-10-13 21:49:15] -rw------- 1 boinc boinc      4936 Oct 13 21:49 pilotlog.txt
[2025-10-13 21:49:15] -rw------- 1 boinc boinc    614918 Oct 13 21:49 log.46676269._043619.job.log.1
[2025-10-13 21:49:15] -rw------- 1 boinc boinc       357 Oct 13 21:49 output.list
[2025-10-13 21:49:15] -rw-rw-r-- 1 boinc boinc       620 Oct 13 21:49 runtime_log
[2025-10-13 21:49:15] -rw------- 1 boinc boinc    890880 Oct 13 21:49 result.tar.gz
[2025-10-13 21:49:15] -rw-rw-r-- 1 boinc boinc      8755 Oct 13 21:49 runtime_log.err
[2025-10-13 21:49:15] -rw------- 1 boinc boinc       655 Oct 13 21:49 MTwMDmpgXR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmcSQMDm9OhSmm.diag
[2025-10-13 21:49:15] -rw-rw-r-- 1 boinc boinc     21928 Oct 13 21:49 stderr.txt
[2025-10-13 21:49:15] HITS file was successfully produced:
[2025-10-13 21:49:15] -rw------- 1 boinc boinc 198427233 Oct 13 21:48 shared/HITS.pool.root.1
[2025-10-13 21:49:15]  *** Contents of shared directory: ***
[2025-10-13 21:49:15] total 411668
[2025-10-13 21:49:15] -rw-r--r-- 2 boinc boinc 221622776 Oct 13 20:38 ATLAS.root_0
[2025-10-13 21:49:15] -rw-r--r-- 2 boinc boinc     15120 Oct 13 20:38 start_atlas.sh
[2025-10-13 21:49:15] -rw-r--r-- 2 boinc boinc    576713 Oct 13 20:38 input.tar.gz
[2025-10-13 21:49:15] -rw------- 1 boinc boinc 198427233 Oct 13 21:48 HITS.pool.root.1
[2025-10-13 21:49:15] -rw------- 1 boinc boinc    890880 Oct 13 21:49 result.tar.gz
21:49:16 (2540763): run_atlas exited; CPU time 16160.383678
21:49:16 (2540763): called boinc_finish(0)

</stderr_txt>
]]>

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