Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:47:37 (873041): wrapper (7.7.26015): starting
20:47:37 (873041): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 20:47:37] Arguments: --nthreads 8
[2025-10-13 20:47:37] Threads: 8
[2025-10-13 20:47:37] Checking for CVMFS
[2025-10-13 20:47:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 20:47:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 20:47:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 20:47:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 20:47:40] 2.13.2.0 129353 119758 117820 151678 0 296 33137782 39288832 9102 16776704 0 70414553 99.778 42600969 37518 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 20:47:40] CVMFS is ok
[2025-10-13 20:47:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 20:47:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 20:47:40] Further information can be found at the LHC@home message board.
[2025-10-13 20:47:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 20:47:40] Checking for apptainer binary...
[2025-10-13 20:47:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 20:47:40] Running /usr/bin/apptainer --version
[2025-10-13 20:47:40] apptainer version 1.4.3-1.el9
[2025-10-13 20:47:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 20:47:41] c-210-13.aglt2.org
[2025-10-13 20:47:41] apptainer works
[2025-10-13 20:47:41] Set ATHENA_PROC_NUMBER=8
[2025-10-13 20:47:41] Set ATHENA_CORE_NUMBER=8
[2025-10-13 20:47:42] Starting ATLAS job with PandaID=6843571903
[2025-10-13 20:47:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:49:09 (1727851): wrapper (7.7.26015): starting
07:49:09 (1727851): wrapper: running run_atlas (--nthreads 12)
[2025-10-14 07:49:09] Arguments: --nthreads 12
[2025-10-14 07:49:09] Threads: 12
[2025-10-14 07:49:09] This job has been restarted, cleaning up previous attempt
[2025-10-14 07:49:09] Checking for CVMFS
[2025-10-14 07:49:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 07:49:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 07:49:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 07:49:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 07:49:11] 2.13.2.0 129353 120420 119160 151696 3 296 33831781 39288832 8217 16776704 0 70824435 99.779 42646041 37499 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-14 07:49:11] CVMFS is ok
[2025-10-14 07:49:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 07:49:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 07:49:11] Further information can be found at the LHC@home message board.
[2025-10-14 07:49:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 07:49:11] Checking for apptainer binary...
[2025-10-14 07:49:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 07:49:11] Running /usr/bin/apptainer --version
[2025-10-14 07:49:11] apptainer version 1.4.3-1.el9
[2025-10-14 07:49:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 07:49:12] c-210-13.aglt2.org
[2025-10-14 07:49:12] apptainer works
[2025-10-14 07:49:12] Set ATHENA_PROC_NUMBER=12
[2025-10-14 07:49:12] Set ATHENA_CORE_NUMBER=12
[2025-10-14 07:49:13] Starting ATLAS job with PandaID=6843571903
[2025-10-14 07:49:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 11:43:20]  *** The last 200 lines of the pilot log: ***
[2025-10-14 11:43:20] 2025-10-14 15:42:15,035 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 11:43:20] 2025-10-14 15:42:15,761 | INFO     | time since job start (13947s) is within the limit (172800.0s)
[2025-10-14 11:43:20] 2025-10-14 15:42:17,152 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 11:43:20] 2025-10-14 15:42:17,159 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.85445
[2025-10-14 11:43:20] 2025-10-14 15:42:17,165 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6843571903/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 11:43:20] 2025-10-14 15:42:17,166 | INFO     | extracted standard info from prmon json
[2025-10-14 11:43:20] 2025-10-14 15:42:17,167 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 11:43:20] 2025-10-14 15:42:17,167 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 11:43:20] 2025-10-14 15:42:17,167 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 11:43:20] 2025-10-14 15:42:17,168 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 11:43:20] 2025-10-14 15:42:17,173 | INFO     | fitting pss+swap vs Time
[2025-10-14 11:43:20] 2025-10-14 15:42:17,173 | INFO     | sum of square deviations: 3675585440.6447144
[2025-10-14 11:43:20] 2025-10-14 15:42:17,175 | INFO     | sum of deviations: 11611870087.539492
[2025-10-14 11:43:20] 2025-10-14 15:42:17,175 | INFO     | mean x: 1760449576.4605262
[2025-10-14 11:43:20] 2025-10-14 15:42:17,175 | INFO     | mean y: 2714024.3377192984
[2025-10-14 11:43:20] 2025-10-14 15:42:17,175 | INFO     | -- intersect: -5558879389.183342
[2025-10-14 11:43:20] 2025-10-14 15:42:17,175 | INFO     | intersect: -5558879389.183342
[2025-10-14 11:43:20] 2025-10-14 15:42:17,176 | INFO     | chi2: 2.807812613902641
[2025-10-14 11:43:20] 2025-10-14 15:42:17,176 | INFO     | sum of square deviations: 3439126865.928239
[2025-10-14 11:43:20] 2025-10-14 15:42:17,178 | INFO     | sum of deviations: 27021314678.807137
[2025-10-14 11:43:20] 2025-10-14 15:42:17,178 | INFO     | mean x: 1760449423.9820628
[2025-10-14 11:43:20] 2025-10-14 15:42:17,178 | INFO     | mean y: 2723781.201793722
[2025-10-14 11:43:20] 2025-10-14 15:42:17,179 | INFO     | -- intersect: -13829175917.765774
[2025-10-14 11:43:20] 2025-10-14 15:42:17,179 | INFO     | intersect: -13829175917.765774
[2025-10-14 11:43:20] 2025-10-14 15:42:17,179 | INFO     | chi2: 2.1183736389536283
[2025-10-14 11:43:20] 2025-10-14 15:42:17,179 | INFO     | current chi2=2.1183736389536283 (change=24.55430862926234 %)
[2025-10-14 11:43:20] 2025-10-14 15:42:17,179 | INFO     | right removable region: 222
[2025-10-14 11:43:20] 2025-10-14 15:42:17,180 | INFO     | sum of square deviations: 3438993275.928239
[2025-10-14 11:43:20] 2025-10-14 15:42:17,181 | INFO     | sum of deviations: -36717361454.874435
[2025-10-14 11:43:20] 2025-10-14 15:42:17,181 | INFO     | mean x: 1760449728.9820628
[2025-10-14 11:43:20] 2025-10-14 15:42:17,182 | INFO     | mean y: 2744961.0313901347
[2025-10-14 11:43:20] 2025-10-14 15:42:17,182 | INFO     | -- intersect: 18798672674.708885
[2025-10-14 11:43:20] 2025-10-14 15:42:17,182 | INFO     | intersect: 18798672674.708885
[2025-10-14 11:43:20] 2025-10-14 15:42:17,182 | INFO     | chi2: 0.9564461138960704
[2025-10-14 11:43:20] 2025-10-14 15:42:17,182 | INFO     | current chi2=0.9564461138960704 (change=65.93625553356694 %)
[2025-10-14 11:43:20] 2025-10-14 15:42:17,183 | INFO     | sum of square deviations: 3212773398.4954004
[2025-10-14 11:43:20] 2025-10-14 15:42:17,184 | INFO     | sum of deviations: -43787671884.92662
[2025-10-14 11:43:20] 2025-10-14 15:42:17,184 | INFO     | mean x: 1760449881.5045872
[2025-10-14 11:43:20] 2025-10-14 15:42:17,185 | INFO     | mean y: 2749704.9266055045
[2025-10-14 11:43:20] 2025-10-14 15:42:17,185 | INFO     | -- intersect: 23996350317.183163
[2025-10-14 11:43:20] 2025-10-14 15:42:17,185 | INFO     | intersect: 23996350317.183163
[2025-10-14 11:43:20] 2025-10-14 15:42:17,185 | INFO     | chi2: 0.9018264377529388
[2025-10-14 11:43:20] 2025-10-14 15:42:17,185 | INFO     | current chi2=0.9018264377529388 (change=5.710690372365993 %)
[2025-10-14 11:43:20] 2025-10-14 15:42:17,186 | INFO     | left removable region: 20
[2025-10-14 11:43:20] 2025-10-14 15:42:17,186 | INFO     | sum of square deviations: 2556111740.0049434
[2025-10-14 11:43:20] 2025-10-14 15:42:17,187 | INFO     | sum of deviations: -8668568208.198017
[2025-10-14 11:43:20] 2025-10-14 15:42:17,188 | INFO     | mean x: 1760450003.549505
[2025-10-14 11:43:20] 2025-10-14 15:42:17,188 | INFO     | mean y: 2746238.0198019804
[2025-10-14 11:43:20] 2025-10-14 15:42:17,188 | INFO     | -- intersect: 5972978561.6121235
[2025-10-14 11:43:20] 2025-10-14 15:42:17,188 | INFO     | intersect: 5972978561.6121235
[2025-10-14 11:43:20] 2025-10-14 15:42:17,189 | INFO     | chi2: 0.10442972598893484
[2025-10-14 11:43:20] 2025-10-14 15:42:17,189 | INFO     | -- intersect: 5972978561.6121235
[2025-10-14 11:43:20] 2025-10-14 15:42:17,189 | INFO     | current memory leak: -3.39 B/s (using 202 data points, chi2=0.10)
[2025-10-14 11:43:20] 2025-10-14 15:42:17,190 | INFO     | could have reported an average CPU frequency of 2589 MHz (11 samples)
[2025-10-14 11:43:20] 2025-10-14 15:42:17,190 | INFO     | ..............................
[2025-10-14 11:43:20] 2025-10-14 15:42:17,190 | INFO     | . Timing measurements:
[2025-10-14 11:43:20] 2025-10-14 15:42:17,190 | INFO     | . get job = 0 s
[2025-10-14 11:43:20] 2025-10-14 15:42:17,190 | INFO     | . initial setup = 3 s
[2025-10-14 11:43:20] 2025-10-14 15:42:17,190 | INFO     | . payload setup = 17 s
[2025-10-14 11:43:20] 2025-10-14 15:42:17,190 | INFO     | . stage-in = 0 s
[2025-10-14 11:43:20] 2025-10-14 15:42:17,191 | INFO     | . payload execution = 13882 s
[2025-10-14 11:43:20] 2025-10-14 15:42:17,191 | INFO     | . stage-out = 2 s
[2025-10-14 11:43:20] 2025-10-14 15:42:17,191 | INFO     | . log creation = 0 s
[2025-10-14 11:43:20] 2025-10-14 15:42:17,191 | INFO     | ..............................
[2025-10-14 11:43:20] 2025-10-14 15:42:17,304 | INFO     | 
[2025-10-14 11:43:20] 2025-10-14 15:42:17,304 | INFO     | job summary report
[2025-10-14 11:43:20] 2025-10-14 15:42:17,304 | INFO     | --------------------------------------------------
[2025-10-14 11:43:20] 2025-10-14 15:42:17,304 | INFO     | PanDA job id: 6843571903
[2025-10-14 11:43:20] 2025-10-14 15:42:17,304 | INFO     | task id: 46676269
[2025-10-14 11:43:20] 2025-10-14 15:42:17,304 | INFO     | errors: (none)
[2025-10-14 11:43:20] 2025-10-14 15:42:17,304 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 11:43:20] 2025-10-14 15:42:17,305 | INFO     | pilot state: finished 
[2025-10-14 11:43:20] 2025-10-14 15:42:17,305 | INFO     | transexitcode: 0
[2025-10-14 11:43:20] 2025-10-14 15:42:17,305 | INFO     | exeerrorcode: 0
[2025-10-14 11:43:20] 2025-10-14 15:42:17,305 | INFO     | exeerrordiag: 
[2025-10-14 11:43:20] 2025-10-14 15:42:17,305 | INFO     | exitcode: 0
[2025-10-14 11:43:20] 2025-10-14 15:42:17,305 | INFO     | exitmsg: OK
[2025-10-14 11:43:20] 2025-10-14 15:42:17,305 | INFO     | cpuconsumptiontime: 53963 s
[2025-10-14 11:43:20] 2025-10-14 15:42:17,305 | INFO     | nevents: 400
[2025-10-14 11:43:20] 2025-10-14 15:42:17,305 | INFO     | neventsw: 0
[2025-10-14 11:43:20] 2025-10-14 15:42:17,305 | INFO     | pid: 1740284
[2025-10-14 11:43:20] 2025-10-14 15:42:17,306 | INFO     | pgrp: 1740284
[2025-10-14 11:43:20] 2025-10-14 15:42:17,306 | INFO     | corecount: 12
[2025-10-14 11:43:20] 2025-10-14 15:42:17,306 | INFO     | event service: False
[2025-10-14 11:43:20] 2025-10-14 15:42:17,306 | INFO     | sizes: {0: 2348633, 1: 2348832, 12: 2349122, 23: 2349122, 13903: 2379496, 13904: 2379495, 13907: 2388741, 13909: 2388797, 13916: 2388991}
[2025-10-14 11:43:20] 2025-10-14 15:42:17,306 | INFO     | --------------------------------------------------
[2025-10-14 11:43:20] 2025-10-14 15:42:17,306 | INFO     | 
[2025-10-14 11:43:20] 2025-10-14 15:42:17,306 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-14 11:43:20] 2025-10-14 15:42:17,326 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 11:43:20] 2025-10-14 15:42:17,327 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 11:43:20] 2025-10-14 15:42:17,327 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 11:43:20] 2025-10-14 15:42:17,327 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 11:43:20] 2025-10-14 15:42:17,327 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 11:43:20] 2025-10-14 15:42:17,327 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 11:43:20] 2025-10-14 15:42:17,327 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 11:43:20] 2025-10-14 15:42:17,328 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 11:43:20] 2025-10-14 15:42:17,328 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 11:43:20] 2025-10-14 15:42:17,328 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 11:43:20] 2025-10-14 15:42:17,328 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 11:43:20] 2025-10-14 15:42:17,328 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 11:43:20] 2025-10-14 15:42:17,328 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 11:43:20] 2025-10-14 15:42:17,328 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 11:43:20] 2025-10-14 15:42:17,328 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 11:43:20] 2025-10-14 15:42:17,328 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 11:43:20] 2025-10-14 15:42:17,329 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 11:43:20] 2025-10-14 15:42:17,329 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 11:43:20] 2025-10-14 15:42:17,329 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 11:43:20] 2025-10-14 15:42:17,329 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 11:43:20] 2025-10-14 15:42:17,329 | INFO     | job 6843571903 has completed (purged errors)
[2025-10-14 11:43:20] 2025-10-14 15:42:17,329 | INFO     | overall cleanup function is called
[2025-10-14 11:43:20] 2025-10-14 15:42:18,337 | INFO     | --- collectZombieJob: --- 10, [1740284]
[2025-10-14 11:43:20] 2025-10-14 15:42:18,338 | INFO     | zombie collector waiting for pid 1740284
[2025-10-14 11:43:20] 2025-10-14 15:42:18,338 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 11:43:20] 2025-10-14 15:42:18,338 | INFO     | collected zombie processes
[2025-10-14 11:43:20] 2025-10-14 15:42:18,338 | INFO     | will attempt to kill all subprocesses of pid=1740284
[2025-10-14 11:43:20] 2025-10-14 15:42:18,561 | INFO     | process IDs to be killed: [1740284] (in reverse order)
[2025-10-14 11:43:20] 2025-10-14 15:42:18,637 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 11:43:20] 2025-10-14 15:42:18,637 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 11:43:20] 2025-10-14 15:42:18,645 | INFO     | did not find any defunct processes belonging to 1740284
[2025-10-14 11:43:20] 2025-10-14 15:42:18,653 | INFO     | did not find any defunct processes belonging to 1740284
[2025-10-14 11:43:20] 2025-10-14 15:42:18,653 | INFO     | ready for new job
[2025-10-14 11:43:20] 2025-10-14 15:42:18,654 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 11:43:20] 2025-10-14 15:42:18,656 | INFO     | ***************************************
[2025-10-14 11:43:20] 2025-10-14 15:42:18,656 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 11:43:20] 2025-10-14 15:42:18,656 | INFO     | ***************************************
[2025-10-14 11:43:20] 2025-10-14 15:42:18,656 | INFO     | 
[2025-10-14 11:43:20] 2025-10-14 15:42:18,659 | INFO     | architecture information:
[2025-10-14 11:43:20] 2025-10-14 15:42:18,659 | INFO     | executing command: cat /etc/os-release
[2025-10-14 11:43:20] 2025-10-14 15:42:18,678 | INFO     | cat /etc/os-release:
[2025-10-14 11:43:20] NAME="CentOS Linux"
[2025-10-14 11:43:20] VERSION="7 (Core)"
[2025-10-14 11:43:20] ID="centos"
[2025-10-14 11:43:20] ID_LIKE="rhel fedora"
[2025-10-14 11:43:20] VERSION_ID="7"
[2025-10-14 11:43:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 11:43:20] ANSI_COLOR="0;31"
[2025-10-14 11:43:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 11:43:20] HOME_URL="https://www.centos.org/"
[2025-10-14 11:43:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 11:43:20] 
[2025-10-14 11:43:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 11:43:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 11:43:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 11:43:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 11:43:20] 
[2025-10-14 11:43:20] 2025-10-14 15:42:18,679 | INFO     | ***************************************
[2025-10-14 11:43:20] 2025-10-14 15:42:19,182 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-14 11:43:20] 2025-10-14 15:42:19,203 | INFO     | sufficient remaining disk space (53833891840 B)
[2025-10-14 11:43:20] 2025-10-14 15:42:19,203 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 11:43:20] 2025-10-14 15:42:19,203 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 11:43:20] 2025-10-14 15:42:19,203 | INFO     | update_server=False
[2025-10-14 11:43:20] 2025-10-14 15:42:19,204 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 11:43:20] 2025-10-14 15:42:19,204 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 11:43:20] 2025-10-14 15:42:19,204 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 11:43:20] 2025-10-14 15:42:19,204 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 11:43:20] 2025-10-14 15:42:19,205 | INFO     | aborting loop
[2025-10-14 11:43:20] 2025-10-14 15:42:19,286 | INFO     | all job control threads have been joined
[2025-10-14 11:43:20] 2025-10-14 15:42:19,287 | INFO     | all data control threads have been joined
[2025-10-14 11:43:20] 2025-10-14 15:42:20,208 | INFO     | [job] retrieve thread has finished
[2025-10-14 11:43:20] 2025-10-14 15:42:20,209 | INFO     | [job] queue monitor thread has finished
[2025-10-14 11:43:20] 2025-10-14 15:42:20,210 | INFO     | [job] job monitor thread has finished
[2025-10-14 11:43:20] 2025-10-14 15:42:20,291 | INFO     | [job] control thread has finished
[2025-10-14 11:43:20] 2025-10-14 15:42:20,292 | INFO     | [data] control thread has finished
[2025-10-14 11:43:20] 2025-10-14 15:42:20,304 | INFO     | [payload] validate_post thread has finished
[2025-10-14 11:43:20] 2025-10-14 15:42:20,363 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 11:43:20] 2025-10-14 15:42:20,410 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 11:43:20] 2025-10-14 15:42:20,587 | INFO     | all payload control threads have been joined
[2025-10-14 11:43:20] 2025-10-14 15:42:20,749 | INFO     | [data] copytool_in thread has finished
[2025-10-14 11:43:20] 2025-10-14 15:42:20,858 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 11:43:20] 2025-10-14 15:42:20,930 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 11:43:20] 2025-10-14 15:42:21,179 | INFO     | [payload] failed_post thread has finished
[2025-10-14 11:43:20] 2025-10-14 15:42:21,210 | INFO     | [data] copytool_out thread has finished
[2025-10-14 11:43:20] 2025-10-14 15:42:21,592 | INFO     | [payload] control thread has finished
[2025-10-14 11:43:20] 2025-10-14 15:42:21,632 | INFO     | [job] validate thread has finished
[2025-10-14 11:43:20] 2025-10-14 15:42:24,413 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 11:43:20] 2025-10-14 15:42:29,945 | INFO     | job.realtimelogging is not enabled
[2025-10-14 11:43:20] 2025-10-14 15:42:30,950 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 11:43:20] 2025-10-14 15:42:49,103 | INFO     | PID=1732274 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 11:43:20] 2025-10-14 15:42:49,104 | INFO     | .. there are 6 such processes running
[2025-10-14 11:43:20] 2025-10-14 15:42:49,104 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 11:43:20] 2025-10-14 15:42:49,104 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 11:43:20] 2025-10-14 15:42:49,104 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 11:43:20] 2025-10-14 15:43:13,646 | INFO     | [monitor] cgroup control has ended
[2025-10-14 11:43:20] 2025-10-14 15:43:14,635 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140569943488320)>', '<ExcThread(monitor, started 140569263183616)>']
[2025-10-14 11:43:20] 2025-10-14 15:43:15,234 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 11:43:20] 2025-10-14 15:43:15,234 | INFO     | [monitor] control thread has ended
[2025-10-14 11:43:20] 2025-10-14 15:43:19,660 | INFO     | all workflow threads have been joined
[2025-10-14 11:43:20] 2025-10-14 15:43:19,660 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 11:43:20] 2025-10-14 15:43:19,661 | INFO     | traces error code: 0
[2025-10-14 11:43:20] 2025-10-14 15:43:19,661 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 11:43:20] 2025-10-14 15:43:19,885 [wrapper] ==== pilot stdout END ====
[2025-10-14 11:43:20] 2025-10-14 15:43:19,889 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 11:43:20] 2025-10-14 15:43:19,893 [wrapper] pilotpid: 1732274
[2025-10-14 11:43:20] 2025-10-14 15:43:19,897 [wrapper] Pilot exit status: 0
[2025-10-14 11:43:20] 2025-10-14 15:43:19,911 [wrapper] pandaids: 6843571903 6843571903
[2025-10-14 11:43:20] 2025-10-14 15:43:19,961 [wrapper] cleanup supervisor_pilot 2030590 1732275
[2025-10-14 11:43:20] 2025-10-14 15:43:19,965 [wrapper] Test setup, not cleaning
[2025-10-14 11:43:20] 2025-10-14 15:43:19,969 [wrapper] apfmon messages muted
[2025-10-14 11:43:20] 2025-10-14 15:43:19,973 [wrapper] ==== wrapper stdout END ====
[2025-10-14 11:43:20] 2025-10-14 15:43:19,977 [wrapper] ==== wrapper stderr END ====
[2025-10-14 11:43:20]  *** Error codes and diagnostics ***
[2025-10-14 11:43:20]     "exeErrorCode": 0,
[2025-10-14 11:43:20]     "exeErrorDiag": "",
[2025-10-14 11:43:20]     "pilotErrorCode": 0,
[2025-10-14 11:43:20]     "pilotErrorDiag": "",
[2025-10-14 11:43:20]  *** Listing of results directory ***
[2025-10-14 11:43:20] total 630940
[2025-10-14 11:43:20] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-14 11:43:20] -rw-r--r--. 1 boincer umatlas    557409 Oct 13 19:08 pilot3.tar.gz
[2025-10-14 11:43:20] -rwx------. 1 boincer umatlas     36292 Oct 13 20:02 runpilot2-wrapper.sh
[2025-10-14 11:43:20] -rw-r--r--. 1 boincer umatlas      5112 Oct 13 20:02 queuedata.json
[2025-10-14 11:43:20] -rw-r--r--. 1 boincer umatlas       100 Oct 13 20:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 11:43:20] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 20:47 run_atlas
[2025-10-14 11:43:20] -rw-r--r--. 1 boincer umatlas       105 Oct 13 20:47 job.xml
[2025-10-14 11:43:20] -rw-r--r--. 3 boincer umatlas 217911684 Oct 13 20:47 EVNT.46676267._000978.pool.root.1
[2025-10-14 11:43:20] -rw-r--r--. 3 boincer umatlas 217911684 Oct 13 20:47 ATLAS.root_0
[2025-10-14 11:43:20] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 20:47 start_atlas.sh
[2025-10-14 11:43:20] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 20:47 shared
[2025-10-14 11:43:20] -rw-r--r--. 2 boincer umatlas    569682 Oct 13 20:47 input.tar.gz
[2025-10-14 11:43:20] -rw-r--r--. 1 boincer umatlas         0 Oct 13 20:47 boinc_lockfile
[2025-10-14 11:43:20] -rw-r--r--. 1 boincer umatlas      2548 Oct 14 07:49 pandaJob.out
[2025-10-14 11:43:20] -rw-------. 1 boincer umatlas    973972 Oct 14 07:49 agis_schedconf.cvmfs.json
[2025-10-14 11:43:20] -rw-r--r--. 1 boincer umatlas      6662 Oct 14 11:36 init_data.xml
[2025-10-14 11:43:20] -rw-------. 1 boincer umatlas 201698666 Oct 14 11:41 HITS.46676269._097055.pool.root.1
[2025-10-14 11:43:20] -rw-r--r--. 1 boincer umatlas       532 Oct 14 11:41 boinc_task_state.xml
[2025-10-14 11:43:20] -rw-------. 1 boincer umatlas      1051 Oct 14 11:42 memory_monitor_summary.json
[2025-10-14 11:43:20] -rw-------. 1 boincer umatlas   1560740 Oct 14 11:42 agis_ddmendpoints.agis.ALL.json
[2025-10-14 11:43:20] -rw-------. 1 boincer umatlas    524866 Oct 14 11:42 log.46676269._097055.job.log.tgz.1
[2025-10-14 11:43:20] -rw-------. 1 boincer umatlas        96 Oct 14 11:42 pilot_heartbeat.json
[2025-10-14 11:43:20] -rw-------. 1 boincer umatlas      7839 Oct 14 11:42 heartbeat.json
[2025-10-14 11:43:20] -rw-r--r--. 1 boincer umatlas      8192 Oct 14 11:43 boinc_mmap_file
[2025-10-14 11:43:20] -rw-r--r--. 1 boincer umatlas        29 Oct 14 11:43 wrapper_checkpoint.txt
[2025-10-14 11:43:20] -rw-------. 1 boincer umatlas      4895 Oct 14 11:43 pilotlog.txt
[2025-10-14 11:43:20] -rw-------. 1 boincer umatlas   1805488 Oct 14 11:43 log.46676269._097055.job.log.1
[2025-10-14 11:43:20] -rw-------. 1 boincer umatlas       357 Oct 14 11:43 output.list
[2025-10-14 11:43:20] -rw-r--r--. 1 boincer umatlas       620 Oct 14 11:43 runtime_log
[2025-10-14 11:43:20] -rw-------. 1 boincer umatlas   2344960 Oct 14 11:43 result.tar.gz
[2025-10-14 11:43:20] -rw-r--r--. 1 boincer umatlas      8791 Oct 14 11:43 runtime_log.err
[2025-10-14 11:43:20] -rw-------. 1 boincer umatlas       784 Oct 14 11:43 KE9LDmufhS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkpmNDmuYrbjn.diag
[2025-10-14 11:43:20] -rw-r--r--. 1 boincer umatlas     23371 Oct 14 11:43 stderr.txt
[2025-10-14 11:43:20] HITS file was successfully produced:
[2025-10-14 11:43:20] -rw-------. 1 boincer umatlas 201698666 Oct 14 11:41 shared/HITS.pool.root.1
[2025-10-14 11:43:20]  *** Contents of shared directory: ***
[2025-10-14 11:43:20] total 412652
[2025-10-14 11:43:20] -rw-r--r--. 3 boincer umatlas 217911684 Oct 13 20:47 ATLAS.root_0
[2025-10-14 11:43:20] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 20:47 start_atlas.sh
[2025-10-14 11:43:20] -rw-r--r--. 2 boincer umatlas    569682 Oct 13 20:47 input.tar.gz
[2025-10-14 11:43:20] -rw-------. 1 boincer umatlas 201698666 Oct 14 11:41 HITS.pool.root.1
[2025-10-14 11:43:20] -rw-------. 1 boincer umatlas   2344960 Oct 14 11:43 result.tar.gz
11:43:21 (1727851): run_atlas exited; CPU time 54229.096644
11:43:21 (1727851): called boinc_finish(0)

</stderr_txt>
]]>

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