Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:58:06 (2777310): wrapper (7.7.26015): starting
18:58:06 (2777310): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 18:58:06] Arguments: --nthreads 8
[2025-10-13 18:58:06] Threads: 8
[2025-10-13 18:58:06] Checking for CVMFS
[2025-10-13 18:58:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 18:58:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 18:58:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 18:58:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 18:58:06] 2.13.2.0 3290912 7472 153572 151676 2 292 31390633 40960000 13150 16776704 0 15929387 99.725 10478379 32470 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 18:58:06] CVMFS is ok
[2025-10-13 18:58:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 18:58:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 18:58:06] Further information can be found at the LHC@home message board.
[2025-10-13 18:58:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 18:58:06] Checking for apptainer binary...
[2025-10-13 18:58:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 18:58:06] Running /usr/bin/apptainer --version
[2025-10-13 18:58:06] apptainer version 1.4.3-1.el9
[2025-10-13 18:58:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 18:58:06] c-210-31-3.aglt2.org
[2025-10-13 18:58:06] apptainer works
[2025-10-13 18:58:07] Set ATHENA_PROC_NUMBER=8
[2025-10-13 18:58:07] Set ATHENA_CORE_NUMBER=8
[2025-10-13 18:58:07] Starting ATLAS job with PandaID=6843491049
[2025-10-13 18:58:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 20:40:35]  *** The last 200 lines of the pilot log: ***
[2025-10-13 20:40:35] 2025-10-14 00:39:55,358 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 20:40:35] 2025-10-14 00:39:55,358 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 20:40:35] 2025-10-14 00:39:55,361 | INFO     | fitting pss+swap vs Time
[2025-10-13 20:40:35] 2025-10-14 00:39:55,361 | INFO     | sum of square deviations: 310047506.9899992
[2025-10-13 20:40:35] 2025-10-14 00:39:55,362 | INFO     | sum of deviations: -5665986835.19
[2025-10-13 20:40:35] 2025-10-14 00:39:55,362 | INFO     | mean x: 1760399345.51
[2025-10-13 20:40:35] 2025-10-14 00:39:55,362 | INFO     | mean y: 2547312.69
[2025-10-13 20:40:35] 2025-10-14 00:39:55,362 | INFO     | -- intersect: 32173099539.250828
[2025-10-13 20:40:35] 2025-10-14 00:39:55,363 | INFO     | intersect: 32173099539.250828
[2025-10-13 20:40:35] 2025-10-14 00:39:55,363 | INFO     | chi2: 2.1412673037051007
[2025-10-13 20:40:35] 2025-10-14 00:39:55,363 | INFO     | sum of square deviations: 265823726.98947364
[2025-10-13 20:40:35] 2025-10-14 00:39:55,364 | INFO     | sum of deviations: 930635387.8315816
[2025-10-13 20:40:35] 2025-10-14 00:39:55,364 | INFO     | mean x: 1760399193.0105264
[2025-10-13 20:40:35] 2025-10-14 00:39:55,364 | INFO     | mean y: 2569186.168421053
[2025-10-13 20:40:35] 2025-10-14 00:39:55,364 | INFO     | -- intersect: -6160499115.821902
[2025-10-13 20:40:35] 2025-10-14 00:39:55,364 | INFO     | intersect: -6160499115.821902
[2025-10-13 20:40:35] 2025-10-14 00:39:55,365 | INFO     | chi2: 1.4782768872439045
[2025-10-13 20:40:35] 2025-10-14 00:39:55,365 | INFO     | current chi2=1.4782768872439045 (change=30.96252463734927 %)
[2025-10-13 20:40:35] 2025-10-14 00:39:55,365 | INFO     | sum of square deviations: 226018634.4888887
[2025-10-13 20:40:35] 2025-10-14 00:39:55,366 | INFO     | sum of deviations: 1121886581.9333346
[2025-10-13 20:40:35] 2025-10-14 00:39:55,366 | INFO     | mean x: 1760399040.511111
[2025-10-13 20:40:35] 2025-10-14 00:39:55,366 | INFO     | mean y: 2569919.566666667
[2025-10-13 20:40:35] 2025-10-14 00:39:55,366 | INFO     | -- intersect: -8735506331.81792
[2025-10-13 20:40:35] 2025-10-14 00:39:55,366 | INFO     | intersect: -8735506331.81792
[2025-10-13 20:40:35] 2025-10-14 00:39:55,366 | INFO     | chi2: 1.4806477151308863
[2025-10-13 20:40:35] 2025-10-14 00:39:55,366 | INFO     | current chi2=1.4806477151308863 (change=-0.16037779575935915 %)
[2025-10-13 20:40:35] 2025-10-14 00:39:55,366 | INFO     | right removable region: 89
[2025-10-13 20:40:35] 2025-10-14 00:39:55,367 | INFO     | sum of square deviations: 265823116.98947364
[2025-10-13 20:40:35] 2025-10-14 00:39:55,367 | INFO     | sum of deviations: -17885304584.76843
[2025-10-13 20:40:35] 2025-10-14 00:39:55,368 | INFO     | mean x: 1760399498.0105264
[2025-10-13 20:40:35] 2025-10-14 00:39:55,368 | INFO     | mean y: 2588177.7684210525
[2025-10-13 20:40:35] 2025-10-14 00:39:55,368 | INFO     | -- intersect: 118447069490.65025
[2025-10-13 20:40:35] 2025-10-14 00:39:55,368 | INFO     | intersect: 118447069490.65025
[2025-10-13 20:40:35] 2025-10-14 00:39:55,368 | INFO     | chi2: 0.8586510734376719
[2025-10-13 20:40:35] 2025-10-14 00:39:55,368 | INFO     | current chi2=0.8586510734376719 (change=59.899865282960164 %)
[2025-10-13 20:40:35] 2025-10-14 00:39:55,368 | INFO     | sum of square deviations: 226017414.4888887
[2025-10-13 20:40:35] 2025-10-14 00:39:55,369 | INFO     | sum of deviations: -13149156866.8
[2025-10-13 20:40:35] 2025-10-14 00:39:55,369 | INFO     | mean x: 1760399650.511111
[2025-10-13 20:40:35] 2025-10-14 00:39:55,369 | INFO     | mean y: 2569977.3
[2025-10-13 20:40:35] 2025-10-14 00:39:55,369 | INFO     | -- intersect: 102418444458.3722
[2025-10-13 20:40:35] 2025-10-14 00:39:55,369 | INFO     | intersect: 102418444458.3722
[2025-10-13 20:40:35] 2025-10-14 00:39:55,370 | INFO     | chi2: 0.8338136449198199
[2025-10-13 20:40:35] 2025-10-14 00:39:55,370 | INFO     | current chi2=0.8338136449198199 (change=2.8926101982745487 %)
[2025-10-13 20:40:35] 2025-10-14 00:39:55,370 | INFO     | left removable region: 20
[2025-10-13 20:40:35] 2025-10-14 00:39:55,370 | INFO     | sum of square deviations: 101843770.0
[2025-10-13 20:40:35] 2025-10-14 00:39:55,370 | INFO     | sum of deviations: 558098089.0
[2025-10-13 20:40:35] 2025-10-14 00:39:55,371 | INFO     | mean x: 1760399620.0
[2025-10-13 20:40:35] 2025-10-14 00:39:55,371 | INFO     | mean y: 2559018.637681159
[2025-10-13 20:40:35] 2025-10-14 00:39:55,371 | INFO     | -- intersect: -9644331152.438332
[2025-10-13 20:40:35] 2025-10-14 00:39:55,371 | INFO     | intersect: -9644331152.438332
[2025-10-13 20:40:35] 2025-10-14 00:39:55,371 | INFO     | chi2: 0.0007278721150075304
[2025-10-13 20:40:35] 2025-10-14 00:39:55,371 | INFO     | -- intersect: -9644331152.438332
[2025-10-13 20:40:35] 2025-10-14 00:39:55,371 | INFO     | current memory leak: 5.48 B/s (using 69 data points, chi2=0.00)
[2025-10-13 20:40:35] 2025-10-14 00:39:55,372 | INFO     | could have reported an average CPU frequency of 2689 MHz (7 samples)
[2025-10-13 20:40:35] 2025-10-14 00:39:55,372 | INFO     | ..............................
[2025-10-13 20:40:35] 2025-10-14 00:39:55,372 | INFO     | . Timing measurements:
[2025-10-13 20:40:35] 2025-10-14 00:39:55,372 | INFO     | . get job = 0 s
[2025-10-13 20:40:35] 2025-10-14 00:39:55,372 | INFO     | . initial setup = 2 s
[2025-10-13 20:40:35] 2025-10-14 00:39:55,372 | INFO     | . payload setup = 6 s
[2025-10-13 20:40:35] 2025-10-14 00:39:55,372 | INFO     | . stage-in = 0 s
[2025-10-13 20:40:35] 2025-10-14 00:39:55,372 | INFO     | . payload execution = 6062 s
[2025-10-13 20:40:35] 2025-10-14 00:39:55,372 | INFO     | . stage-out = 0 s
[2025-10-13 20:40:35] 2025-10-14 00:39:55,372 | INFO     | . log creation = 0 s
[2025-10-13 20:40:35] 2025-10-14 00:39:55,372 | INFO     | ..............................
[2025-10-13 20:40:35] 2025-10-14 00:39:55,490 | INFO     | 
[2025-10-13 20:40:35] 2025-10-14 00:39:55,491 | INFO     | job summary report
[2025-10-13 20:40:35] 2025-10-14 00:39:55,491 | INFO     | --------------------------------------------------
[2025-10-13 20:40:35] 2025-10-14 00:39:55,491 | INFO     | PanDA job id: 6843491049
[2025-10-13 20:40:35] 2025-10-14 00:39:55,491 | INFO     | task id: 46676269
[2025-10-13 20:40:35] 2025-10-14 00:39:55,491 | INFO     | errors: (none)
[2025-10-13 20:40:35] 2025-10-14 00:39:55,491 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 20:40:35] 2025-10-14 00:39:55,491 | INFO     | pilot state: finished 
[2025-10-13 20:40:35] 2025-10-14 00:39:55,491 | INFO     | transexitcode: 0
[2025-10-13 20:40:35] 2025-10-14 00:39:55,491 | INFO     | exeerrorcode: 0
[2025-10-13 20:40:35] 2025-10-14 00:39:55,492 | INFO     | exeerrordiag: 
[2025-10-13 20:40:35] 2025-10-14 00:39:55,492 | INFO     | exitcode: 0
[2025-10-13 20:40:35] 2025-10-14 00:39:55,492 | INFO     | exitmsg: OK
[2025-10-13 20:40:35] 2025-10-14 00:39:55,492 | INFO     | cpuconsumptiontime: 42061 s
[2025-10-13 20:40:35] 2025-10-14 00:39:55,492 | INFO     | nevents: 400
[2025-10-13 20:40:35] 2025-10-14 00:39:55,492 | INFO     | neventsw: 0
[2025-10-13 20:40:35] 2025-10-14 00:39:55,492 | INFO     | pid: 2787428
[2025-10-13 20:40:35] 2025-10-14 00:39:55,492 | INFO     | pgrp: 2787428
[2025-10-13 20:40:35] 2025-10-14 00:39:55,492 | INFO     | corecount: 8
[2025-10-13 20:40:35] 2025-10-14 00:39:55,492 | INFO     | event service: False
[2025-10-13 20:40:35] 2025-10-14 00:39:55,493 | INFO     | sizes: {0: 2348756, 5: 2349018, 11: 2349074, 6072: 2375890, 6074: 2384888, 6077: 2384944, 6081: 2385266}
[2025-10-13 20:40:35] 2025-10-14 00:39:55,493 | INFO     | --------------------------------------------------
[2025-10-13 20:40:35] 2025-10-14 00:39:55,493 | INFO     | 
[2025-10-13 20:40:35] 2025-10-14 00:39:55,493 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 20:40:35] 2025-10-14 00:39:55,514 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 20:40:35] 2025-10-14 00:39:55,515 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 20:40:35] 2025-10-14 00:39:55,515 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 20:40:35] 2025-10-14 00:39:55,515 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 20:40:35] 2025-10-14 00:39:55,515 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 20:40:35] 2025-10-14 00:39:55,515 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 20:40:35] 2025-10-14 00:39:55,515 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 20:40:35] 2025-10-14 00:39:55,516 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 20:40:35] 2025-10-14 00:39:55,516 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 20:40:35] 2025-10-14 00:39:55,516 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 20:40:35] 2025-10-14 00:39:55,516 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 20:40:35] 2025-10-14 00:39:55,516 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 20:40:35] 2025-10-14 00:39:55,516 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 20:40:35] 2025-10-14 00:39:55,516 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 20:40:35] 2025-10-14 00:39:55,516 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 20:40:35] 2025-10-14 00:39:55,516 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 20:40:35] 2025-10-14 00:39:55,516 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 20:40:35] 2025-10-14 00:39:55,516 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 20:40:35] 2025-10-14 00:39:55,516 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 20:40:35] 2025-10-14 00:39:55,517 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 20:40:35] 2025-10-14 00:39:55,517 | INFO     | job 6843491049 has completed (purged errors)
[2025-10-13 20:40:35] 2025-10-14 00:39:55,517 | INFO     | overall cleanup function is called
[2025-10-13 20:40:35] 2025-10-14 00:39:56,525 | INFO     | --- collectZombieJob: --- 10, [2787428]
[2025-10-13 20:40:35] 2025-10-14 00:39:56,525 | INFO     | zombie collector waiting for pid 2787428
[2025-10-13 20:40:35] 2025-10-14 00:39:56,525 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 20:40:35] 2025-10-14 00:39:56,525 | INFO     | collected zombie processes
[2025-10-13 20:40:35] 2025-10-14 00:39:56,525 | INFO     | will attempt to kill all subprocesses of pid=2787428
[2025-10-13 20:40:35] 2025-10-14 00:39:56,773 | INFO     | process IDs to be killed: [2787428] (in reverse order)
[2025-10-13 20:40:35] 2025-10-14 00:39:56,853 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 20:40:35] 2025-10-14 00:39:56,854 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 20:40:35] 2025-10-14 00:39:56,864 | INFO     | did not find any defunct processes belonging to 2787428
[2025-10-13 20:40:35] 2025-10-14 00:39:56,875 | INFO     | did not find any defunct processes belonging to 2787428
[2025-10-13 20:40:35] 2025-10-14 00:39:56,875 | INFO     | ready for new job
[2025-10-13 20:40:35] 2025-10-14 00:39:56,875 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 20:40:35] 2025-10-14 00:39:56,877 | INFO     | ***************************************
[2025-10-13 20:40:35] 2025-10-14 00:39:56,878 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 20:40:35] 2025-10-14 00:39:56,878 | INFO     | ***************************************
[2025-10-13 20:40:35] 2025-10-14 00:39:56,878 | INFO     | 
[2025-10-13 20:40:35] 2025-10-14 00:39:56,881 | INFO     | architecture information:
[2025-10-13 20:40:35] 2025-10-14 00:39:56,882 | INFO     | executing command: cat /etc/os-release
[2025-10-13 20:40:35] 2025-10-14 00:39:56,898 | INFO     | cat /etc/os-release:
[2025-10-13 20:40:35] NAME="CentOS Linux"
[2025-10-13 20:40:35] VERSION="7 (Core)"
[2025-10-13 20:40:35] ID="centos"
[2025-10-13 20:40:35] ID_LIKE="rhel fedora"
[2025-10-13 20:40:35] VERSION_ID="7"
[2025-10-13 20:40:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 20:40:35] ANSI_COLOR="0;31"
[2025-10-13 20:40:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 20:40:35] HOME_URL="https://www.centos.org/"
[2025-10-13 20:40:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 20:40:35] 
[2025-10-13 20:40:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 20:40:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 20:40:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 20:40:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 20:40:35] 
[2025-10-13 20:40:35] 2025-10-14 00:39:56,898 | INFO     | ***************************************
[2025-10-13 20:40:35] 2025-10-14 00:39:57,399 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 20:40:35] 2025-10-14 00:39:57,420 | INFO     | sufficient remaining disk space (75515297792 B)
[2025-10-13 20:40:35] 2025-10-14 00:39:57,420 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 20:40:35] 2025-10-14 00:39:57,420 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 20:40:35] 2025-10-14 00:39:57,420 | INFO     | update_server=False
[2025-10-13 20:40:35] 2025-10-14 00:39:57,420 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 20:40:35] 2025-10-14 00:39:57,421 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 20:40:35] 2025-10-14 00:39:57,421 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 20:40:35] 2025-10-14 00:39:57,421 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 20:40:35] 2025-10-14 00:39:57,422 | INFO     | aborting loop
[2025-10-13 20:40:35] 2025-10-14 00:39:58,171 | INFO     | all payload control threads have been joined
[2025-10-13 20:40:35] 2025-10-14 00:39:58,256 | INFO     | all data control threads have been joined
[2025-10-13 20:40:35] 2025-10-14 00:39:58,257 | INFO     | all job control threads have been joined
[2025-10-13 20:40:35] 2025-10-14 00:39:58,426 | INFO     | [job] retrieve thread has finished
[2025-10-13 20:40:35] 2025-10-14 00:39:58,426 | INFO     | [job] queue monitor thread has finished
[2025-10-13 20:40:35] 2025-10-14 00:39:58,427 | INFO     | [job] job monitor thread has finished
[2025-10-13 20:40:35] 2025-10-14 00:39:58,733 | INFO     | [payload] validate_post thread has finished
[2025-10-13 20:40:35] 2025-10-14 00:39:58,763 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 20:40:35] 2025-10-14 00:39:59,176 | INFO     | [payload] control thread has finished
[2025-10-13 20:40:35] 2025-10-14 00:39:59,233 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 20:40:35] 2025-10-14 00:39:59,261 | INFO     | [data] control thread has finished
[2025-10-13 20:40:35] 2025-10-14 00:39:59,262 | INFO     | [job] control thread has finished
[2025-10-13 20:40:35] 2025-10-14 00:39:59,430 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 20:40:35] 2025-10-14 00:39:59,470 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 20:40:35] 2025-10-14 00:39:59,724 | INFO     | [job] validate thread has finished
[2025-10-13 20:40:35] 2025-10-14 00:39:59,738 | INFO     | [payload] failed_post thread has finished
[2025-10-13 20:40:35] 2025-10-14 00:39:59,773 | INFO     | [data] copytool_in thread has finished
[2025-10-13 20:40:35] 2025-10-14 00:40:00,769 | INFO     | [data] copytool_out thread has finished
[2025-10-13 20:40:35] 2025-10-14 00:40:01,427 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 20:40:35] 2025-10-14 00:40:07,507 | INFO     | job.realtimelogging is not enabled
[2025-10-13 20:40:35] 2025-10-14 00:40:08,513 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 20:40:35] 2025-10-14 00:40:27,998 | INFO     | PID=2780965 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 20:40:35] 2025-10-14 00:40:27,998 | INFO     | .. there are 13 such processes running
[2025-10-13 20:40:35] 2025-10-14 00:40:27,999 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 20:40:35] 2025-10-14 00:40:27,999 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 20:40:35] 2025-10-14 00:40:27,999 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 20:40:35] 2025-10-14 00:40:28,321 | INFO     | [monitor] cgroup control has ended
[2025-10-13 20:40:35] 2025-10-14 00:40:29,906 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140614544332608)>', '<ExcThread(monitor, started 140613915756288)>']
[2025-10-13 20:40:35] 2025-10-14 00:40:30,009 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 20:40:35] 2025-10-14 00:40:30,009 | INFO     | [monitor] control thread has ended
[2025-10-13 20:40:35] 2025-10-14 00:40:34,931 | INFO     | all workflow threads have been joined
[2025-10-13 20:40:35] 2025-10-14 00:40:34,932 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 20:40:35] 2025-10-14 00:40:34,932 | INFO     | traces error code: 0
[2025-10-13 20:40:35] 2025-10-14 00:40:34,932 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 20:40:35] 2025-10-14 00:40:35,116 [wrapper] ==== pilot stdout END ====
[2025-10-13 20:40:35] 2025-10-14 00:40:35,120 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 20:40:35] 2025-10-14 00:40:35,123 [wrapper] pilotpid: 2780965
[2025-10-13 20:40:35] 2025-10-14 00:40:35,125 [wrapper] Pilot exit status: 0
[2025-10-13 20:40:35] 2025-10-14 00:40:35,139 [wrapper] pandaids: 6843491049
[2025-10-13 20:40:35] 2025-10-14 00:40:35,195 [wrapper] cleanup supervisor_pilot 2910354 2780966
[2025-10-13 20:40:35] 2025-10-14 00:40:35,199 [wrapper] Test setup, not cleaning
[2025-10-13 20:40:35] 2025-10-14 00:40:35,202 [wrapper] apfmon messages muted
[2025-10-13 20:40:35] 2025-10-14 00:40:35,205 [wrapper] ==== wrapper stdout END ====
[2025-10-13 20:40:35] 2025-10-14 00:40:35,208 [wrapper] ==== wrapper stderr END ====
[2025-10-13 20:40:35]  *** Error codes and diagnostics ***
[2025-10-13 20:40:35]     "exeErrorCode": 0,
[2025-10-13 20:40:35]     "exeErrorDiag": "",
[2025-10-13 20:40:35]     "pilotErrorCode": 0,
[2025-10-13 20:40:35]     "pilotErrorDiag": "",
[2025-10-13 20:40:35]  *** Listing of results directory ***
[2025-10-13 20:40:35] total 411272
[2025-10-13 20:40:35] -rw-r--r--. 1 boincer umatlas    557409 Oct 13 17:47 pilot3.tar.gz
[2025-10-13 20:40:35] -rw-r--r--. 1 boincer umatlas      5112 Oct 13 18:17 queuedata.json
[2025-10-13 20:40:35] -rwx------. 1 boincer umatlas     36292 Oct 13 18:21 runpilot2-wrapper.sh
[2025-10-13 20:40:35] -rw-r--r--. 1 boincer umatlas       100 Oct 13 18:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 20:40:35] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 18:58 run_atlas
[2025-10-13 20:40:35] -rw-r--r--. 1 boincer umatlas       105 Oct 13 18:58 job.xml
[2025-10-13 20:40:35] -rw-r--r--. 2 boincer umatlas 221435066 Oct 13 18:58 EVNT.46676267._004825.pool.root.1
[2025-10-13 20:40:35] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 18:58 start_atlas.sh
[2025-10-13 20:40:35] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 18:58 shared
[2025-10-13 20:40:35] -rw-r--r--. 2 boincer umatlas    569685 Oct 13 18:58 input.tar.gz
[2025-10-13 20:40:35] -rw-r--r--. 1 boincer umatlas         0 Oct 13 18:58 boinc_lockfile
[2025-10-13 20:40:35] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 18:58 pandaJob.out
[2025-10-13 20:40:35] -rw-------. 1 boincer umatlas    972799 Oct 13 18:58 agis_schedconf.cvmfs.json
[2025-10-13 20:40:35] -rw-------. 1 boincer umatlas   1560580 Oct 13 18:58 agis_ddmendpoints.agis.ALL.json
[2025-10-13 20:40:35] drwx------. 5 boincer umatlas      4096 Oct 13 18:58 pilot3
[2025-10-13 20:40:35] -rw-r--r--. 1 boincer umatlas      6841 Oct 13 20:39 init_data.xml
[2025-10-13 20:40:35] -rw-------. 1 boincer umatlas 193323979 Oct 13 20:39 HITS.46676269._097033.pool.root.1
[2025-10-13 20:40:35] -rw-r--r--. 1 boincer umatlas       530 Oct 13 20:39 boinc_task_state.xml
[2025-10-13 20:40:35] -rw-------. 1 boincer umatlas      1035 Oct 13 20:39 memory_monitor_summary.json
[2025-10-13 20:40:35] -rw-------. 1 boincer umatlas    358987 Oct 13 20:39 log.46676269._097033.job.log.tgz.1
[2025-10-13 20:40:35] -rw-------. 1 boincer umatlas      7817 Oct 13 20:39 heartbeat.json
[2025-10-13 20:40:35] -rw-------. 1 boincer umatlas        95 Oct 13 20:40 pilot_heartbeat.json
[2025-10-13 20:40:35] -rw-r--r--. 1 boincer umatlas        27 Oct 13 20:40 wrapper_checkpoint.txt
[2025-10-13 20:40:35] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 20:40 boinc_mmap_file
[2025-10-13 20:40:35] -rw-------. 1 boincer umatlas      4896 Oct 13 20:40 pilotlog.txt
[2025-10-13 20:40:35] -rw-------. 1 boincer umatlas    881044 Oct 13 20:40 log.46676269._097033.job.log.1
[2025-10-13 20:40:35] -rw-------. 1 boincer umatlas       357 Oct 13 20:40 output.list
[2025-10-13 20:40:35] -rw-r--r--. 1 boincer umatlas       620 Oct 13 20:40 runtime_log
[2025-10-13 20:40:35] -rw-------. 1 boincer umatlas   1259520 Oct 13 20:40 result.tar.gz
[2025-10-13 20:40:35] -rw-r--r--. 1 boincer umatlas      8713 Oct 13 20:40 runtime_log.err
[2025-10-13 20:40:35] -rw-------. 1 boincer umatlas       655 Oct 13 20:40 MPsLDm15fS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmalVMDmrkkHFn.diag
[2025-10-13 20:40:35] -rw-r--r--. 1 boincer umatlas     20915 Oct 13 20:40 stderr.txt
[2025-10-13 20:40:35] HITS file was successfully produced:
[2025-10-13 20:40:35] -rw-------. 1 boincer umatlas 193323979 Oct 13 20:39 shared/HITS.pool.root.1
[2025-10-13 20:40:35]  *** Contents of shared directory: ***
[2025-10-13 20:40:35] total 406856
[2025-10-13 20:40:35] -rw-r--r--. 2 boincer umatlas 221435066 Oct 13 18:58 ATLAS.root_0
[2025-10-13 20:40:35] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 18:58 start_atlas.sh
[2025-10-13 20:40:35] -rw-r--r--. 2 boincer umatlas    569685 Oct 13 18:58 input.tar.gz
[2025-10-13 20:40:35] -rw-------. 1 boincer umatlas 193323979 Oct 13 20:39 HITS.pool.root.1
[2025-10-13 20:40:35] -rw-------. 1 boincer umatlas   1259520 Oct 13 20:40 result.tar.gz
20:40:57 (2777310): run_atlas exited; CPU time 42163.380688
20:40:57 (2777310): called boinc_finish(0)

</stderr_txt>
]]>

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