Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:20:35 (2988624): wrapper (7.7.26015): starting
04:20:35 (2988624): wrapper: running run_atlas (--nthreads 12)
[2025-10-14 04:20:36] Arguments: --nthreads 12
[2025-10-14 04:20:36] Threads: 12
[2025-10-14 04:20:36] Checking for CVMFS
[2025-10-14 04:20:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 04:20:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 04:20:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 04:20:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 04:20:36] 2.13.1.0 2584362 14163 85228 151681 0 57 2986097 4097024 0 130560 0 25176413 99.996 488035 4259 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-14 04:20:36] CVMFS is ok
[2025-10-14 04:20:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 04:20:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 04:20:36] Further information can be found at the LHC@home message board.
[2025-10-14 04:20:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 04:20:36] Checking for apptainer binary...
[2025-10-14 04:20:36] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-14 04:20:36] apptainer is not installed, using version from CVMFS
[2025-10-14 04:20:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 04:20:36] pckelar1.cern.ch
[2025-10-14 04:20:36] apptainer works
[2025-10-14 04:20:36] Set ATHENA_PROC_NUMBER=12
[2025-10-14 04:20:36] Set ATHENA_CORE_NUMBER=12
[2025-10-14 04:20:36] Starting ATLAS job with PandaID=6831946350
[2025-10-14 04:20:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 05:03:03]  *** The last 200 lines of the pilot log: ***
[2025-10-14 05:03:03]  scope=mc23_13p6TeV
[2025-10-14 05:03:03]  status=None
[2025-10-14 05:03:03]  status_code=0
[2025-10-14 05:03:03]  storage_token=
[2025-10-14 05:03:03]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6831946350/log.46376905._094191.job.log.tgz.1
[2025-10-14 05:03:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/43/4b/log.46376905._094191.job.log.tgz.1
[2025-10-14 05:03:03]  workdir=None
[2025-10-14 05:03:03] ]
[2025-10-14 05:03:03] 2025-10-14 03:02:25,113 | INFO     | transferring file log.46376905._094191.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6831946350/log.46376905._094191.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-14 05:03:03] 2025-10-14 03:02:25,113 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6831946350/log.46376905._094191.job.log.tgz.1 /var/lib/boinc/slots/0/log.46376905._094191.job
[2025-10-14 05:03:03] 2025-10-14 03:02:25,125 | INFO     | adding to output.list: log.46376905._094191.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/43/4b/log.46376905._094191.job.log.tg
[2025-10-14 05:03:03] 2025-10-14 03:02:25,125 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-14 05:03:03] 2025-10-14 03:02:25,125 | INFO     | summary of transferred files:
[2025-10-14 05:03:03] 2025-10-14 03:02:25,125 | INFO     |  -- lfn=log.46376905._094191.job.log.tgz.1, status_code=0, status=transferred
[2025-10-14 05:03:03] 2025-10-14 03:02:25,126 | INFO     | stage-out finished correctly
[2025-10-14 05:03:03] 2025-10-14 03:02:25,168 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-14 05:03:03] 2025-10-14 03:02:25,212 | INFO     | job 6831946350 has state=finished
[2025-10-14 05:03:03] 2025-10-14 03:02:25,212 | INFO     | preparing for final server update for job 6831946350 in state='finished'
[2025-10-14 05:03:03] 2025-10-14 03:02:25,687 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-14 05:03:03] 2025-10-14 03:02:25,687 | INFO     | this job has now completed (state=finished)
[2025-10-14 05:03:03] 2025-10-14 03:02:25,687 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-14 05:03:03] 2025-10-14 03:02:25,688 | INFO     | log transfer has been attempted: DONE
[2025-10-14 05:03:03] 2025-10-14 03:02:25,688 | INFO     | job 6831946350 has finished - writing final server update
[2025-10-14 05:03:03] 2025-10-14 03:02:25,688 | INFO     | total number of processed events: 400 (read)
[2025-10-14 05:03:03] 2025-10-14 03:02:25,689 | INFO     | executing command: lscpu
[2025-10-14 05:03:03] 2025-10-14 03:02:25,706 | INFO     | time since job start (2502s) is within the limit (172800.0s)
[2025-10-14 05:03:03] 2025-10-14 03:02:25,709 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-14 05:03:03] 2025-10-14 03:02:26,349 | WARNING  | process 2999897 can no longer be monitored (due to stat problems) - aborting
[2025-10-14 05:03:03] 2025-10-14 03:02:26,350 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6831946350/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 05:03:03] 2025-10-14 03:02:26,419 | INFO     | number of running child processes to parent process 2999897: 1
[2025-10-14 05:03:03] 2025-10-14 03:02:26,419 | INFO     | maximum number of monitored processes: 6
[2025-10-14 05:03:03] 2025-10-14 03:02:26,813 | INFO     | PID=2992446 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 05:03:03] 2025-10-14 03:02:27,813 | INFO     | time since job start (2504s) is within the limit (172800.0s)
[2025-10-14 05:03:03] 2025-10-14 03:02:28,922 | INFO     | monitor loop #194: job 0:6831946350 is in state 'finished'
[2025-10-14 05:03:03] 2025-10-14 03:02:28,922 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 05:03:03] 2025-10-14 03:02:29,819 | INFO     | time since job start (2506s) is within the limit (172800.0s)
[2025-10-14 05:03:03] 2025-10-14 03:02:30,200 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 05:03:03] 2025-10-14 03:02:30,202 | INFO     | found 20 cores (10 cores per socket, 2 sockets) , CPU MHz: 2488.2523
[2025-10-14 05:03:03] 2025-10-14 03:02:30,204 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6831946350/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 05:03:03] 2025-10-14 03:02:30,205 | INFO     | extracted standard info from prmon json
[2025-10-14 05:03:03] 2025-10-14 03:02:30,205 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 05:03:03] 2025-10-14 03:02:30,205 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 05:03:03] 2025-10-14 03:02:30,205 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 05:03:03] 2025-10-14 03:02:30,205 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 05:03:03] 2025-10-14 03:02:30,206 | INFO     | fitting pss+swap vs Time
[2025-10-14 05:03:03] 2025-10-14 03:02:30,206 | INFO     | sum of square deviations: 12176972.5
[2025-10-14 05:03:03] 2025-10-14 03:02:30,206 | INFO     | sum of deviations: 310149894.5
[2025-10-14 05:03:03] 2025-10-14 03:02:30,206 | INFO     | mean x: 1760409779.5
[2025-10-14 05:03:03] 2025-10-14 03:02:30,206 | INFO     | mean y: 3158336.5
[2025-10-14 05:03:03] 2025-10-14 03:02:30,206 | INFO     | -- intersect: -44834826424.383156
[2025-10-14 05:03:03] 2025-10-14 03:02:30,206 | INFO     | intersect: -44834826424.383156
[2025-10-14 05:03:03] 2025-10-14 03:02:30,207 | INFO     | chi2: 0.00023047740888331605
[2025-10-14 05:03:03] 2025-10-14 03:02:30,207 | INFO     | -- intersect: -44834826424.383156
[2025-10-14 05:03:03] 2025-10-14 03:02:30,207 | INFO     | current memory leak: 25.47 B/s (using 34 data points, chi2=0.00)
[2025-10-14 05:03:03] 2025-10-14 03:02:30,207 | INFO     | could have reported an average CPU frequency of 2483 MHz (5 samples)
[2025-10-14 05:03:03] 2025-10-14 03:02:30,207 | INFO     | ..............................
[2025-10-14 05:03:03] 2025-10-14 03:02:30,207 | INFO     | . Timing measurements:
[2025-10-14 05:03:03] 2025-10-14 03:02:30,207 | INFO     | . get job = 0 s
[2025-10-14 05:03:03] 2025-10-14 03:02:30,207 | INFO     | . initial setup = 1 s
[2025-10-14 05:03:03] 2025-10-14 03:02:30,207 | INFO     | . payload setup = 6 s
[2025-10-14 05:03:03] 2025-10-14 03:02:30,207 | INFO     | . stage-in = 0 s
[2025-10-14 05:03:03] 2025-10-14 03:02:30,207 | INFO     | . payload execution = 2477 s
[2025-10-14 05:03:03] 2025-10-14 03:02:30,207 | INFO     | . stage-out = 0 s
[2025-10-14 05:03:03] 2025-10-14 03:02:30,207 | INFO     | . log creation = 0 s
[2025-10-14 05:03:03] 2025-10-14 03:02:30,207 | INFO     | ..............................
[2025-10-14 05:03:03] 2025-10-14 03:02:30,253 | INFO     | 
[2025-10-14 05:03:03] 2025-10-14 03:02:30,253 | INFO     | job summary report
[2025-10-14 05:03:03] 2025-10-14 03:02:30,253 | INFO     | --------------------------------------------------
[2025-10-14 05:03:03] 2025-10-14 03:02:30,253 | INFO     | PanDA job id: 6831946350
[2025-10-14 05:03:03] 2025-10-14 03:02:30,253 | INFO     | task id: 46376905
[2025-10-14 05:03:03] 2025-10-14 03:02:30,253 | INFO     | errors: (none)
[2025-10-14 05:03:03] 2025-10-14 03:02:30,253 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 05:03:03] 2025-10-14 03:02:30,253 | INFO     | pilot state: finished 
[2025-10-14 05:03:03] 2025-10-14 03:02:30,254 | INFO     | transexitcode: 0
[2025-10-14 05:03:03] 2025-10-14 03:02:30,254 | INFO     | exeerrorcode: 0
[2025-10-14 05:03:03] 2025-10-14 03:02:30,254 | INFO     | exeerrordiag: 
[2025-10-14 05:03:03] 2025-10-14 03:02:30,254 | INFO     | exitcode: 0
[2025-10-14 05:03:03] 2025-10-14 03:02:30,254 | INFO     | exitmsg: OK
[2025-10-14 05:03:03] 2025-10-14 03:02:30,254 | INFO     | cpuconsumptiontime: 26814 s
[2025-10-14 05:03:03] 2025-10-14 03:02:30,254 | INFO     | nevents: 400
[2025-10-14 05:03:03] 2025-10-14 03:02:30,254 | INFO     | neventsw: 0
[2025-10-14 05:03:03] 2025-10-14 03:02:30,254 | INFO     | pid: 2999897
[2025-10-14 05:03:03] 2025-10-14 03:02:30,254 | INFO     | pgrp: 2999897
[2025-10-14 05:03:03] 2025-10-14 03:02:30,254 | INFO     | corecount: 12
[2025-10-14 05:03:03] 2025-10-14 03:02:30,254 | INFO     | event service: False
[2025-10-14 05:03:03] 2025-10-14 03:02:30,254 | INFO     | sizes: {0: 2348816, 3: 2349078, 10: 2349106, 2486: 2374298, 2487: 2383352, 2492: 2383522}
[2025-10-14 05:03:03] 2025-10-14 03:02:30,254 | INFO     | --------------------------------------------------
[2025-10-14 05:03:03] 2025-10-14 03:02:30,254 | INFO     | 
[2025-10-14 05:03:03] 2025-10-14 03:02:30,254 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-14 05:03:03] 2025-10-14 03:02:30,268 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 05:03:03] 2025-10-14 03:02:30,268 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 05:03:03] 2025-10-14 03:02:30,268 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 05:03:03] 2025-10-14 03:02:30,268 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 05:03:03] 2025-10-14 03:02:30,268 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 05:03:03] 2025-10-14 03:02:30,268 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 05:03:03] 2025-10-14 03:02:30,269 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 05:03:03] 2025-10-14 03:02:30,269 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 05:03:03] 2025-10-14 03:02:30,269 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 05:03:03] 2025-10-14 03:02:30,269 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 05:03:03] 2025-10-14 03:02:30,269 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 05:03:03] 2025-10-14 03:02:30,269 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 05:03:03] 2025-10-14 03:02:30,269 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 05:03:03] 2025-10-14 03:02:30,269 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 05:03:03] 2025-10-14 03:02:30,269 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 05:03:03] 2025-10-14 03:02:30,269 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 05:03:03] 2025-10-14 03:02:30,269 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 05:03:03] 2025-10-14 03:02:30,269 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 05:03:03] 2025-10-14 03:02:30,269 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 05:03:03] 2025-10-14 03:02:30,269 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 05:03:03] 2025-10-14 03:02:30,269 | INFO     | job 6831946350 has completed (purged errors)
[2025-10-14 05:03:03] 2025-10-14 03:02:30,269 | INFO     | overall cleanup function is called
[2025-10-14 05:03:03] 2025-10-14 03:02:31,276 | INFO     | --- collectZombieJob: --- 10, [2999897]
[2025-10-14 05:03:03] 2025-10-14 03:02:31,276 | INFO     | zombie collector waiting for pid 2999897
[2025-10-14 05:03:03] 2025-10-14 03:02:31,276 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 05:03:03] 2025-10-14 03:02:31,277 | INFO     | collected zombie processes
[2025-10-14 05:03:03] 2025-10-14 03:02:31,277 | INFO     | will attempt to kill all subprocesses of pid=2999897
[2025-10-14 05:03:03] 2025-10-14 03:02:31,353 | INFO     | process IDs to be killed: [2999897] (in reverse order)
[2025-10-14 05:03:03] 2025-10-14 03:02:31,382 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 05:03:03] 2025-10-14 03:02:31,382 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 05:03:03] 2025-10-14 03:02:31,384 | INFO     | did not find any defunct processes belonging to 2999897
[2025-10-14 05:03:03] 2025-10-14 03:02:31,386 | INFO     | did not find any defunct processes belonging to 2999897
[2025-10-14 05:03:03] 2025-10-14 03:02:31,386 | INFO     | ready for new job
[2025-10-14 05:03:03] 2025-10-14 03:02:31,386 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 05:03:03] 2025-10-14 03:02:31,387 | INFO     | ***************************************
[2025-10-14 05:03:03] 2025-10-14 03:02:31,387 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-14 05:03:03] 2025-10-14 03:02:31,387 | INFO     | ***************************************
[2025-10-14 05:03:03] 2025-10-14 03:02:31,387 | INFO     | 
[2025-10-14 05:03:03] 2025-10-14 03:02:31,388 | INFO     | architecture information:
[2025-10-14 05:03:03] 2025-10-14 03:02:31,388 | INFO     | executing command: cat /etc/os-release
[2025-10-14 05:03:03] 2025-10-14 03:02:31,397 | INFO     | cat /etc/os-release:
[2025-10-14 05:03:03] NAME="CentOS Linux"
[2025-10-14 05:03:03] VERSION="7 (Core)"
[2025-10-14 05:03:03] ID="centos"
[2025-10-14 05:03:03] ID_LIKE="rhel fedora"
[2025-10-14 05:03:03] VERSION_ID="7"
[2025-10-14 05:03:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 05:03:03] ANSI_COLOR="0;31"
[2025-10-14 05:03:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 05:03:03] HOME_URL="https://www.centos.org/"
[2025-10-14 05:03:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 05:03:03] 
[2025-10-14 05:03:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 05:03:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 05:03:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 05:03:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 05:03:03] 
[2025-10-14 05:03:03] 2025-10-14 03:02:31,397 | INFO     | ***************************************
[2025-10-14 05:03:03] 2025-10-14 03:02:31,900 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-14 05:03:03] 2025-10-14 03:02:31,912 | INFO     | sufficient remaining disk space (829834657792 B)
[2025-10-14 05:03:03] 2025-10-14 03:02:31,912 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 05:03:03] 2025-10-14 03:02:31,912 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 05:03:03] 2025-10-14 03:02:31,912 | INFO     | update_server=False
[2025-10-14 05:03:03] 2025-10-14 03:02:31,913 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 05:03:03] 2025-10-14 03:02:31,913 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 05:03:03] 2025-10-14 03:02:31,913 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 05:03:03] 2025-10-14 03:02:32,070 | INFO     | all job control threads have been joined
[2025-10-14 05:03:03] 2025-10-14 03:02:32,148 | INFO     | all data control threads have been joined
[2025-10-14 05:03:03] 2025-10-14 03:02:32,431 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 05:03:03] 2025-10-14 03:02:32,431 | INFO     | aborting loop
[2025-10-14 05:03:03] 2025-10-14 03:02:32,918 | INFO     | [job] retrieve thread has finished
[2025-10-14 05:03:03] 2025-10-14 03:02:32,918 | INFO     | [job] queue monitor thread has finished
[2025-10-14 05:03:03] 2025-10-14 03:02:32,956 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 05:03:03] 2025-10-14 03:02:32,971 | INFO     | all payload control threads have been joined
[2025-10-14 05:03:03] 2025-10-14 03:02:33,075 | INFO     | [job] control thread has finished
[2025-10-14 05:03:03] 2025-10-14 03:02:33,153 | INFO     | [data] control thread has finished
[2025-10-14 05:03:03] 2025-10-14 03:02:33,179 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 05:03:03] 2025-10-14 03:02:33,436 | INFO     | [job] job monitor thread has finished
[2025-10-14 05:03:03] 2025-10-14 03:02:33,486 | INFO     | [data] copytool_in thread has finished
[2025-10-14 05:03:03] 2025-10-14 03:02:33,501 | INFO     | [payload] validate_post thread has finished
[2025-10-14 05:03:03] 2025-10-14 03:02:33,977 | INFO     | [payload] control thread has finished
[2025-10-14 05:03:03] 2025-10-14 03:02:34,167 | INFO     | [job] validate thread has finished
[2025-10-14 05:03:03] 2025-10-14 03:02:34,199 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 05:03:03] 2025-10-14 03:02:34,353 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 05:03:03] 2025-10-14 03:02:34,380 | INFO     | [payload] failed_post thread has finished
[2025-10-14 05:03:03] 2025-10-14 03:02:35,185 | INFO     | [data] copytool_out thread has finished
[2025-10-14 05:03:03] 2025-10-14 03:02:35,919 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 05:03:03] 2025-10-14 03:02:42,313 | INFO     | job.realtimelogging is not enabled
[2025-10-14 05:03:03] 2025-10-14 03:02:43,319 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 05:03:03] 2025-10-14 03:02:46,726 | INFO     | [monitor] cgroup control has ended
[2025-10-14 05:03:03] 2025-10-14 03:02:47,257 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140712860362560)>', '<ExcThread(monitor, started 140712028915456)>']
[2025-10-14 05:03:03] 2025-10-14 03:02:52,272 | INFO     | all workflow threads have been joined
[2025-10-14 05:03:03] 2025-10-14 03:02:52,272 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 05:03:03] 2025-10-14 03:02:52,272 | INFO     | traces error code: 0
[2025-10-14 05:03:03] 2025-10-14 03:02:52,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 05:03:03] 2025-10-14 03:03:03,002 | INFO     | PID=2992446 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 05:03:03] 2025-10-14 03:03:03,003 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 05:03:03] 2025-10-14 03:03:03,003 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 05:03:03] 2025-10-14 03:03:03,003 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 05:03:03] 2025-10-14 03:03:03,003 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 05:03:03] 2025-10-14 03:03:03,003 | INFO     | [monitor] control thread has ended
[2025-10-14 05:03:03] 2025-10-14 03:03:03,067 [wrapper] ==== pilot stdout END ====
[2025-10-14 05:03:03] 2025-10-14 03:03:03,069 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 05:03:03] 2025-10-14 03:03:03,071 [wrapper] pilotpid: 2992446
[2025-10-14 05:03:03] 2025-10-14 03:03:03,073 [wrapper] Pilot exit status: 0
[2025-10-14 05:03:03] 2025-10-14 03:03:03,081 [wrapper] pandaids: 6831946350
[2025-10-14 05:03:03] 2025-10-14 03:03:03,102 [wrapper] cleanup supervisor_pilot 3009183 2992447
[2025-10-14 05:03:03] 2025-10-14 03:03:03,104 [wrapper] Test setup, not cleaning
[2025-10-14 05:03:03] 2025-10-14 03:03:03,107 [wrapper] apfmon messages muted
[2025-10-14 05:03:03] 2025-10-14 03:03:03,108 [wrapper] ==== wrapper stdout END ====
[2025-10-14 05:03:03] 2025-10-14 03:03:03,111 [wrapper] ==== wrapper stderr END ====
[2025-10-14 05:03:03]  *** Error codes and diagnostics ***
[2025-10-14 05:03:03]     "exeErrorCode": 0,
[2025-10-14 05:03:03]     "exeErrorDiag": "",
[2025-10-14 05:03:03]     "pilotErrorCode": 0,
[2025-10-14 05:03:03]     "pilotErrorDiag": "",
[2025-10-14 05:03:03]  *** Listing of results directory ***
[2025-10-14 05:03:03] total 399576
[2025-10-14 05:03:03] -rw-r--r-- 1 boinc boinc    552446 Oct  5 21:35 pilot3.tar.gz
[2025-10-14 05:03:03] -rw-r--r-- 1 boinc boinc      5112 Oct  5 21:42 queuedata.json
[2025-10-14 05:03:03] -rwx------ 1 boinc boinc     36292 Oct  5 21:42 runpilot2-wrapper.sh
[2025-10-14 05:03:03] -rw-r--r-- 1 boinc boinc       100 Oct 14 04:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 05:03:03] -rwxr-xr-x 1 boinc boinc      7986 Oct 14 04:20 run_atlas
[2025-10-14 05:03:03] -rw-r--r-- 1 boinc boinc       105 Oct 14 04:20 job.xml
[2025-10-14 05:03:03] -rw-r--r-- 1 boinc boinc      6532 Oct 14 04:20 init_data.xml
[2025-10-14 05:03:03] -rw-r--r-- 2 boinc boinc 215349473 Oct 14 04:20 EVNT.46376901._003470.pool.root.1
[2025-10-14 05:03:03] -rw-r--r-- 2 boinc boinc     15120 Oct 14 04:20 start_atlas.sh
[2025-10-14 05:03:03] drwxrwx--x 2 boinc boinc        68 Oct 14 04:20 shared
[2025-10-14 05:03:03] -rw-r--r-- 2 boinc boinc    565605 Oct 14 04:20 input.tar.gz
[2025-10-14 05:03:03] -rw-r--r-- 1 boinc boinc         0 Oct 14 04:20 boinc_lockfile
[2025-10-14 05:03:03] -rw-r--r-- 1 boinc boinc      2519 Oct 14 04:20 pandaJob.out
[2025-10-14 05:03:03] -rw------- 1 boinc boinc    972807 Oct 14 04:20 agis_schedconf.cvmfs.json
[2025-10-14 05:03:03] -rw------- 1 boinc boinc   1560580 Oct 14 04:20 agis_ddmendpoints.agis.ALL.json
[2025-10-14 05:03:03] drwx------ 4 boinc boinc      4096 Oct 14 04:20 pilot3
[2025-10-14 05:03:03] -rw------- 1 boinc boinc 188442005 Oct 14 05:01 HITS.46376905._094191.pool.root.1
[2025-10-14 05:03:03] -rw-r--r-- 1 boinc boinc       529 Oct 14 05:02 boinc_task_state.xml
[2025-10-14 05:03:03] -rw------- 1 boinc boinc      1020 Oct 14 05:02 memory_monitor_summary.json
[2025-10-14 05:03:03] -rw------- 1 boinc boinc    361630 Oct 14 05:02 log.46376905._094191.job.log.tgz.1
[2025-10-14 05:03:03] -rw------- 1 boinc boinc      7795 Oct 14 05:02 heartbeat.json
[2025-10-14 05:03:03] -rw-r--r-- 1 boinc boinc      8192 Oct 14 05:02 boinc_mmap_file
[2025-10-14 05:03:03] -rw-r--r-- 1 boinc boinc        27 Oct 14 05:02 wrapper_checkpoint.txt
[2025-10-14 05:03:03] -rw------- 1 boinc boinc       747 Oct 14 05:03 pilotlog.txt
[2025-10-14 05:03:03] -rw------- 1 boinc boinc        95 Oct 14 05:03 pilot_heartbeat.json
[2025-10-14 05:03:03] -rw------- 1 boinc boinc    389342 Oct 14 05:03 log.46376905._094191.job.log.1
[2025-10-14 05:03:03] -rw------- 1 boinc boinc       357 Oct 14 05:03 output.list
[2025-10-14 05:03:03] -rw-r--r-- 1 boinc boinc       620 Oct 14 05:03 runtime_log
[2025-10-14 05:03:03] -rw------- 1 boinc boinc    768000 Oct 14 05:03 result.tar.gz
[2025-10-14 05:03:03] -rw-r--r-- 1 boinc boinc      8727 Oct 14 05:03 runtime_log.err
[2025-10-14 05:03:03] -rw------- 1 boinc boinc       654 Oct 14 05:03 oIKODmqnjP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmxKHMDmVNOq4m.diag
[2025-10-14 05:03:03] -rw-r--r-- 1 boinc boinc     22105 Oct 14 05:03 stderr.txt
[2025-10-14 05:03:03] HITS file was successfully produced:
[2025-10-14 05:03:03] -rw------- 1 boinc boinc 188442005 Oct 14 05:01 shared/HITS.pool.root.1
[2025-10-14 05:03:03]  *** Contents of shared directory: ***
[2025-10-14 05:03:03] total 395656
[2025-10-14 05:03:03] -rw-r--r-- 2 boinc boinc 215349473 Oct 14 04:20 ATLAS.root_0
[2025-10-14 05:03:03] -rw-r--r-- 2 boinc boinc     15120 Oct 14 04:20 start_atlas.sh
[2025-10-14 05:03:03] -rw-r--r-- 2 boinc boinc    565605 Oct 14 04:20 input.tar.gz
[2025-10-14 05:03:03] -rw------- 1 boinc boinc 188442005 Oct 14 05:01 HITS.pool.root.1
[2025-10-14 05:03:03] -rw------- 1 boinc boinc    768000 Oct 14 05:03 result.tar.gz
05:03:04 (2988624): run_atlas exited; CPU time 26823.759881
05:03:04 (2988624): called boinc_finish(0)

</stderr_txt>
]]>

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