Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
18:31:06 (1891762): wrapper (7.7.26015): starting
18:31:06 (1891762): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 18:31:06] Arguments: --nthreads 4
[2025-10-13 18:31:06] Threads: 4
[2025-10-13 18:31:06] Checking for CVMFS
[2025-10-13 18:31:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 18:31:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 18:31:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 18:31:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 18:31:07] 2.13.2.0 3732220 8616 58164 151676 2 188 2886252 4096001 10983 130560 0 59095510 99.999 424254 1218 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 18:31:07] CVMFS is ok
[2025-10-13 18:31:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 18:31:07] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 18:31:07] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 18:31:07] Further information can be found at the LHC@home message board.
[2025-10-13 18:31:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 18:31:07] Checking for apptainer binary...
[2025-10-13 18:31:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 18:31:07] Running /usr/bin/apptainer --version
[2025-10-13 18:31:07] apptainer version 1.4.3
[2025-10-13 18:31:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 18:31:07] T7810-Ubuntu
[2025-10-13 18:31:07] apptainer works
[2025-10-13 18:31:07] Set ATHENA_PROC_NUMBER=4
[2025-10-13 18:31:07] Set ATHENA_CORE_NUMBER=4
[2025-10-13 18:31:07] Starting ATLAS job with PandaID=6840225193
[2025-10-13 18:31:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 20:44:39]  *** The last 200 lines of the pilot log: ***
[2025-10-13 20:44:39] 2025-10-14 00:43:37,780 | INFO     | monitor loop #577: job 0:6840225193 is in state 'finished'
[2025-10-13 20:44:39] 2025-10-14 00:43:37,780 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 20:44:39] 2025-10-14 00:43:38,890 | INFO     | time since job start (7936s) is within the limit (172800.0s)
[2025-10-13 20:44:39] 2025-10-14 00:43:38,996 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 20:44:39] 2025-10-14 00:43:39,003 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 3121.3967499999994
[2025-10-13 20:44:39] 2025-10-14 00:43:39,009 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/4/PanDA_Pilot-6840225193/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 20:44:39] 2025-10-14 00:43:39,010 | INFO     | extracted standard info from prmon json
[2025-10-13 20:44:39] 2025-10-14 00:43:39,010 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 20:44:39] 2025-10-14 00:43:39,010 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 20:44:39] 2025-10-14 00:43:39,010 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 20:44:39] 2025-10-14 00:43:39,011 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 20:44:39] 2025-10-14 00:43:39,012 | INFO     | fitting pss+swap vs Time
[2025-10-13 20:44:39] 2025-10-14 00:43:39,013 | INFO     | sum of square deviations: 681212772.5
[2025-10-13 20:44:39] 2025-10-14 00:43:39,013 | INFO     | sum of deviations: 12567039257.000004
[2025-10-13 20:44:39] 2025-10-14 00:43:39,013 | INFO     | mean x: 1760398644.5
[2025-10-13 20:44:39] 2025-10-14 00:43:39,013 | INFO     | mean y: 2305193.030769231
[2025-10-13 20:44:39] 2025-10-14 00:43:39,013 | INFO     | -- intersect: -32473596267.55304
[2025-10-13 20:44:39] 2025-10-14 00:43:39,013 | INFO     | intersect: -32473596267.55304
[2025-10-13 20:44:39] 2025-10-14 00:43:39,013 | INFO     | chi2: 1.494315473495617
[2025-10-13 20:44:39] 2025-10-14 00:43:39,014 | INFO     | sum of square deviations: 605592750.0
[2025-10-13 20:44:39] 2025-10-14 00:43:39,014 | INFO     | sum of deviations: 11922780681.0
[2025-10-13 20:44:39] 2025-10-14 00:43:39,014 | INFO     | mean x: 1760398492.0
[2025-10-13 20:44:39] 2025-10-14 00:43:39,014 | INFO     | mean y: 2303894.112
[2025-10-13 20:44:39] 2025-10-14 00:43:39,014 | INFO     | -- intersect: -34656045518.557045
[2025-10-13 20:44:39] 2025-10-14 00:43:39,014 | INFO     | intersect: -34656045518.557045
[2025-10-13 20:44:39] 2025-10-14 00:43:39,014 | INFO     | chi2: 1.4965099745557797
[2025-10-13 20:44:39] 2025-10-14 00:43:39,014 | INFO     | current chi2=1.4965099745557797 (change=-0.14685661087542506 %)
[2025-10-13 20:44:39] 2025-10-14 00:43:39,015 | INFO     | right removable region: 124
[2025-10-13 20:44:39] 2025-10-14 00:43:39,015 | INFO     | sum of square deviations: 605592750.0
[2025-10-13 20:44:39] 2025-10-14 00:43:39,015 | INFO     | sum of deviations: -5361792823.0
[2025-10-13 20:44:39] 2025-10-14 00:43:39,015 | INFO     | mean x: 1760398797.0
[2025-10-13 20:44:39] 2025-10-14 00:43:39,015 | INFO     | mean y: 2340676.872
[2025-10-13 20:44:39] 2025-10-14 00:43:39,015 | INFO     | -- intersect: 15588547142.144962
[2025-10-13 20:44:39] 2025-10-14 00:43:39,015 | INFO     | intersect: 15588547142.144962
[2025-10-13 20:44:39] 2025-10-14 00:43:39,015 | INFO     | chi2: 0.012371493950347028
[2025-10-13 20:44:39] 2025-10-14 00:43:39,016 | INFO     | current chi2=0.012371493950347028 (change=99.17209624274273 %)
[2025-10-13 20:44:39] 2025-10-14 00:43:39,016 | INFO     | sum of square deviations: 535786790.0
[2025-10-13 20:44:39] 2025-10-14 00:43:39,016 | INFO     | sum of deviations: -4943091812.0
[2025-10-13 20:44:39] 2025-10-14 00:43:39,016 | INFO     | mean x: 1760398949.5
[2025-10-13 20:44:39] 2025-10-14 00:43:39,016 | INFO     | mean y: 2339753.5166666666
[2025-10-13 20:44:39] 2025-10-14 00:43:39,016 | INFO     | -- intersect: 16243527098.069994
[2025-10-13 20:44:39] 2025-10-14 00:43:39,016 | INFO     | intersect: 16243527098.069994
[2025-10-13 20:44:39] 2025-10-14 00:43:39,017 | INFO     | chi2: 0.01217713879492911
[2025-10-13 20:44:39] 2025-10-14 00:43:39,017 | INFO     | current chi2=0.01217713879492911 (change=1.570991799357155 %)
[2025-10-13 20:44:39] 2025-10-14 00:43:39,017 | INFO     | left removable region: 20
[2025-10-13 20:44:39] 2025-10-14 00:43:39,017 | INFO     | sum of square deviations: 348769330.0
[2025-10-13 20:44:39] 2025-10-14 00:43:39,017 | INFO     | sum of deviations: -3319806720.9999995
[2025-10-13 20:44:39] 2025-10-14 00:43:39,017 | INFO     | mean x: 1760399071.5
[2025-10-13 20:44:39] 2025-10-14 00:43:39,017 | INFO     | mean y: 2335518.8846153845
[2025-10-13 20:44:39] 2025-10-14 00:43:39,017 | INFO     | -- intersect: 16758925524.11202
[2025-10-13 20:44:39] 2025-10-14 00:43:39,017 | INFO     | intersect: 16758925524.11202
[2025-10-13 20:44:39] 2025-10-14 00:43:39,017 | INFO     | chi2: 0.010492237963713387
[2025-10-13 20:44:39] 2025-10-14 00:43:39,018 | INFO     | -- intersect: 16758925524.11202
[2025-10-13 20:44:39] 2025-10-14 00:43:39,018 | INFO     | current memory leak: -9.52 B/s (using 104 data points, chi2=0.01)
[2025-10-13 20:44:39] 2025-10-14 00:43:39,018 | INFO     | could have reported an average CPU frequency of 2912 MHz (8 samples)
[2025-10-13 20:44:39] 2025-10-14 00:43:39,018 | INFO     | ..............................
[2025-10-13 20:44:39] 2025-10-14 00:43:39,018 | INFO     | . Timing measurements:
[2025-10-13 20:44:39] 2025-10-14 00:43:39,018 | INFO     | . get job = 0 s
[2025-10-13 20:44:39] 2025-10-14 00:43:39,018 | INFO     | . initial setup = 4 s
[2025-10-13 20:44:39] 2025-10-14 00:43:39,018 | INFO     | . payload setup = 6 s
[2025-10-13 20:44:39] 2025-10-14 00:43:39,018 | INFO     | . stage-in = 0 s
[2025-10-13 20:44:39] 2025-10-14 00:43:39,018 | INFO     | . payload execution = 7904 s
[2025-10-13 20:44:39] 2025-10-14 00:43:39,018 | INFO     | . stage-out = 0 s
[2025-10-13 20:44:39] 2025-10-14 00:43:39,018 | INFO     | . log creation = 0 s
[2025-10-13 20:44:39] 2025-10-14 00:43:39,019 | INFO     | ..............................
[2025-10-13 20:44:39] 2025-10-14 00:43:39,074 | INFO     | 
[2025-10-13 20:44:39] 2025-10-14 00:43:39,074 | INFO     | job summary report
[2025-10-13 20:44:39] 2025-10-14 00:43:39,074 | INFO     | --------------------------------------------------
[2025-10-13 20:44:39] 2025-10-14 00:43:39,075 | INFO     | PanDA job id: 6840225193
[2025-10-13 20:44:39] 2025-10-14 00:43:39,075 | INFO     | task id: 46676269
[2025-10-13 20:44:39] 2025-10-14 00:43:39,075 | INFO     | errors: (none)
[2025-10-13 20:44:39] 2025-10-14 00:43:39,075 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 20:44:39] 2025-10-14 00:43:39,075 | INFO     | pilot state: finished 
[2025-10-13 20:44:39] 2025-10-14 00:43:39,075 | INFO     | transexitcode: 0
[2025-10-13 20:44:39] 2025-10-14 00:43:39,075 | INFO     | exeerrorcode: 0
[2025-10-13 20:44:39] 2025-10-14 00:43:39,075 | INFO     | exeerrordiag: 
[2025-10-13 20:44:39] 2025-10-14 00:43:39,075 | INFO     | exitcode: 0
[2025-10-13 20:44:39] 2025-10-14 00:43:39,075 | INFO     | exitmsg: OK
[2025-10-13 20:44:39] 2025-10-14 00:43:39,075 | INFO     | cpuconsumptiontime: 30620 s
[2025-10-13 20:44:39] 2025-10-14 00:43:39,075 | INFO     | nevents: 400
[2025-10-13 20:44:39] 2025-10-14 00:43:39,075 | INFO     | neventsw: 0
[2025-10-13 20:44:39] 2025-10-14 00:43:39,075 | INFO     | pid: 1905125
[2025-10-13 20:44:39] 2025-10-14 00:43:39,075 | INFO     | pgrp: 1905125
[2025-10-13 20:44:39] 2025-10-14 00:43:39,075 | INFO     | corecount: 4
[2025-10-13 20:44:39] 2025-10-14 00:43:39,075 | INFO     | event service: False
[2025-10-13 20:44:39] 2025-10-14 00:43:39,075 | INFO     | sizes: {0: 2348757, 1: 2348899, 5: 2349161, 11: 2349217, 7913: 2376926, 7914: 2376925, 7915: 2386135, 7916: 2386191, 7920: 2386413}
[2025-10-13 20:44:39] 2025-10-14 00:43:39,075 | INFO     | --------------------------------------------------
[2025-10-13 20:44:39] 2025-10-14 00:43:39,076 | INFO     | 
[2025-10-13 20:44:39] 2025-10-14 00:43:39,076 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/4
[2025-10-13 20:44:39] 2025-10-14 00:43:39,089 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 20:44:39] 2025-10-14 00:43:39,089 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 20:44:39] 2025-10-14 00:43:39,089 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 20:44:39] 2025-10-14 00:43:39,089 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 20:44:39] 2025-10-14 00:43:39,089 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 20:44:39] 2025-10-14 00:43:39,089 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 20:44:39] 2025-10-14 00:43:39,089 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 20:44:39] 2025-10-14 00:43:39,089 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 20:44:39] 2025-10-14 00:43:39,089 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 20:44:39] 2025-10-14 00:43:39,089 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 20:44:39] 2025-10-14 00:43:39,089 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 20:44:39] 2025-10-14 00:43:39,090 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 20:44:39] 2025-10-14 00:43:39,090 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 20:44:39] 2025-10-14 00:43:39,090 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 20:44:39] 2025-10-14 00:43:39,090 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 20:44:39] 2025-10-14 00:43:39,090 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 20:44:39] 2025-10-14 00:43:39,090 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 20:44:39] 2025-10-14 00:43:39,090 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 20:44:39] 2025-10-14 00:43:39,090 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 20:44:39] 2025-10-14 00:43:39,090 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 20:44:39] 2025-10-14 00:43:39,090 | INFO     | job 6840225193 has completed (purged errors)
[2025-10-13 20:44:39] 2025-10-14 00:43:39,090 | INFO     | overall cleanup function is called
[2025-10-13 20:44:39] 2025-10-14 00:43:40,097 | INFO     | --- collectZombieJob: --- 10, [1905125]
[2025-10-13 20:44:39] 2025-10-14 00:43:40,098 | INFO     | zombie collector waiting for pid 1905125
[2025-10-13 20:44:39] 2025-10-14 00:43:40,098 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 20:44:39] 2025-10-14 00:43:40,098 | INFO     | collected zombie processes
[2025-10-13 20:44:39] 2025-10-14 00:43:40,098 | INFO     | will attempt to kill all subprocesses of pid=1905125
[2025-10-13 20:44:39] 2025-10-14 00:43:40,351 | INFO     | process IDs to be killed: [1905125] (in reverse order)
[2025-10-13 20:44:39] 2025-10-14 00:43:40,406 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 20:44:39] 2025-10-14 00:43:40,406 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 20:44:39] 2025-10-14 00:43:40,411 | INFO     | did not find any defunct processes belonging to 1905125
[2025-10-13 20:44:39] 2025-10-14 00:43:40,415 | INFO     | did not find any defunct processes belonging to 1905125
[2025-10-13 20:44:39] 2025-10-14 00:43:40,416 | INFO     | ready for new job
[2025-10-13 20:44:39] 2025-10-14 00:43:40,416 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 20:44:39] 2025-10-14 00:43:40,417 | INFO     | ***************************************
[2025-10-13 20:44:39] 2025-10-14 00:43:40,417 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 20:44:39] 2025-10-14 00:43:40,417 | INFO     | ***************************************
[2025-10-13 20:44:39] 2025-10-14 00:43:40,417 | INFO     | 
[2025-10-13 20:44:39] 2025-10-14 00:43:40,419 | INFO     | architecture information:
[2025-10-13 20:44:39] 2025-10-14 00:43:40,419 | INFO     | executing command: cat /etc/os-release
[2025-10-13 20:44:39] 2025-10-14 00:43:40,429 | INFO     | cat /etc/os-release:
[2025-10-13 20:44:39] NAME="CentOS Linux"
[2025-10-13 20:44:39] VERSION="7 (Core)"
[2025-10-13 20:44:39] ID="centos"
[2025-10-13 20:44:39] ID_LIKE="rhel fedora"
[2025-10-13 20:44:39] VERSION_ID="7"
[2025-10-13 20:44:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 20:44:39] ANSI_COLOR="0;31"
[2025-10-13 20:44:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 20:44:39] HOME_URL="https://www.centos.org/"
[2025-10-13 20:44:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 20:44:39] 
[2025-10-13 20:44:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 20:44:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 20:44:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 20:44:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 20:44:39] 
[2025-10-13 20:44:39] 2025-10-14 00:43:40,429 | INFO     | ***************************************
[2025-10-13 20:44:39] 2025-10-14 00:43:40,931 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/4
[2025-10-13 20:44:39] 2025-10-14 00:43:40,943 | INFO     | sufficient remaining disk space (405113143296 B)
[2025-10-13 20:44:39] 2025-10-14 00:43:40,943 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 20:44:39] 2025-10-14 00:43:40,943 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 20:44:39] 2025-10-14 00:43:40,943 | INFO     | update_server=False
[2025-10-13 20:44:39] 2025-10-14 00:43:40,944 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 20:44:39] 2025-10-14 00:43:40,944 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 20:44:39] 2025-10-14 00:43:40,944 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 20:44:39] 2025-10-14 00:43:41,092 | INFO     | all job control threads have been joined
[2025-10-13 20:44:39] 2025-10-14 00:43:41,288 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 20:44:39] 2025-10-14 00:43:41,288 | INFO     | aborting loop
[2025-10-13 20:44:39] 2025-10-14 00:43:41,500 | INFO     | all data control threads have been joined
[2025-10-13 20:44:39] 2025-10-14 00:43:41,949 | INFO     | [job] retrieve thread has finished
[2025-10-13 20:44:39] 2025-10-14 00:43:41,949 | INFO     | [job] queue monitor thread has finished
[2025-10-13 20:44:39] 2025-10-14 00:43:41,987 | INFO     | all payload control threads have been joined
[2025-10-13 20:44:39] 2025-10-14 00:43:42,044 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 20:44:39] 2025-10-14 00:43:42,096 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 20:44:39] 2025-10-14 00:43:42,098 | INFO     | [job] control thread has finished
[2025-10-13 20:44:39] 2025-10-14 00:43:42,147 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 20:44:39] 2025-10-14 00:43:42,263 | INFO     | [payload] validate_post thread has finished
[2025-10-13 20:44:39] 2025-10-14 00:43:42,272 | INFO     | [data] copytool_in thread has finished
[2025-10-13 20:44:39] 2025-10-14 00:43:42,293 | INFO     | [job] job monitor thread has finished
[2025-10-13 20:44:39] 2025-10-14 00:43:42,503 | INFO     | [data] control thread has finished
[2025-10-13 20:44:39] 2025-10-14 00:43:42,607 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 20:44:39] 2025-10-14 00:43:42,992 | INFO     | [payload] control thread has finished
[2025-10-13 20:44:39] 2025-10-14 00:43:43,337 | INFO     | [job] validate thread has finished
[2025-10-13 20:44:39] 2025-10-14 00:43:43,337 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 20:44:39] 2025-10-14 00:43:43,481 | INFO     | [payload] failed_post thread has finished
[2025-10-13 20:44:39] 2025-10-14 00:43:44,153 | INFO     | [data] copytool_out thread has finished
[2025-10-13 20:44:39] 2025-10-14 00:43:44,949 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 20:44:39] 2025-10-14 00:44:12,185 | INFO     | PID=1895966 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 20:44:39] 2025-10-14 00:44:12,186 | INFO     | .. there are 3 such processes running
[2025-10-13 20:44:39] 2025-10-14 00:44:12,186 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 20:44:39] 2025-10-14 00:44:12,186 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 20:44:39] 2025-10-14 00:44:12,186 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 20:44:39] 2025-10-14 00:44:34,081 | INFO     | [monitor] cgroup control has ended
[2025-10-13 20:44:39] 2025-10-14 00:44:34,521 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133149140293440)>', '<ExcThread(monitor, started 133148767655680)>']
[2025-10-13 20:44:39] 2025-10-14 00:44:35,286 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 20:44:39] 2025-10-14 00:44:35,286 | INFO     | [monitor] control thread has ended
[2025-10-13 20:44:39] 2025-10-14 00:44:39,541 | INFO     | all workflow threads have been joined
[2025-10-13 20:44:39] 2025-10-14 00:44:39,541 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 20:44:39] 2025-10-14 00:44:39,541 | INFO     | traces error code: 0
[2025-10-13 20:44:39] 2025-10-14 00:44:39,542 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 20:44:39] 2025-10-14 00:44:39,611 [wrapper] ==== pilot stdout END ====
[2025-10-13 20:44:39] 2025-10-14 00:44:39,613 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 20:44:39] 2025-10-14 00:44:39,615 [wrapper] pilotpid: 1895966
[2025-10-13 20:44:39] 2025-10-14 00:44:39,616 [wrapper] Pilot exit status: 0
[2025-10-13 20:44:39] 2025-10-14 00:44:39,623 [wrapper] pandaids: 6840225193
[2025-10-13 20:44:39] 2025-10-14 00:44:39,659 [wrapper] cleanup supervisor_pilot 2057611 1895967
[2025-10-13 20:44:39] 2025-10-14 00:44:39,662 [wrapper] Test setup, not cleaning
[2025-10-13 20:44:39] 2025-10-14 00:44:39,663 [wrapper] apfmon messages muted
[2025-10-13 20:44:39] 2025-10-14 00:44:39,665 [wrapper] ==== wrapper stdout END ====
[2025-10-13 20:44:39] 2025-10-14 00:44:39,667 [wrapper] ==== wrapper stderr END ====
[2025-10-13 20:44:39]  *** Error codes and diagnostics ***
[2025-10-13 20:44:39]     "exeErrorCode": 0,
[2025-10-13 20:44:39]     "exeErrorDiag": "",
[2025-10-13 20:44:39]     "pilotErrorCode": 0,
[2025-10-13 20:44:39]     "pilotErrorDiag": "",
[2025-10-13 20:44:39]  *** Listing of results directory ***
[2025-10-13 20:44:39] total 414708
[2025-10-13 20:44:39] -rw-r--r-- 1 whitlerd whitlerd    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-13 20:44:39] -rwx------ 1 whitlerd whitlerd     36292 Oct 12 11:42 runpilot2-wrapper.sh
[2025-10-13 20:44:39] -rw-r--r-- 1 whitlerd whitlerd      5112 Oct 12 11:42 queuedata.json
[2025-10-13 20:44:39] -rw-rw-r-- 1 whitlerd whitlerd       100 Oct 13 18:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 20:44:39] -rwxr-xr-x 1 whitlerd whitlerd      7986 Oct 13 18:31 run_atlas
[2025-10-13 20:44:39] -rw-rw-r-- 1 whitlerd whitlerd       105 Oct 13 18:31 job.xml
[2025-10-13 20:44:39] -rw-r--r-- 2 whitlerd whitlerd 222892234 Oct 13 18:31 EVNT.46676267._004581.pool.root.1
[2025-10-13 20:44:39] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct 13 18:31 start_atlas.sh
[2025-10-13 20:44:39] drwxrwx--x 2 whitlerd whitlerd      4096 Oct 13 18:31 shared
[2025-10-13 20:44:39] -rw-r--r-- 2 whitlerd whitlerd    569680 Oct 13 18:31 input.tar.gz
[2025-10-13 20:44:39] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct 13 18:31 boinc_setup_complete
[2025-10-13 20:44:39] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct 13 18:31 boinc_lockfile
[2025-10-13 20:44:39] -rw-rw-r-- 1 whitlerd whitlerd      2550 Oct 13 18:31 pandaJob.out
[2025-10-13 20:44:39] -rw------- 1 whitlerd whitlerd    972799 Oct 13 18:31 agis_schedconf.cvmfs.json
[2025-10-13 20:44:39] -rw------- 1 whitlerd whitlerd   1560580 Oct 13 18:31 agis_ddmendpoints.agis.ALL.json
[2025-10-13 20:44:39] drwx------ 5 whitlerd whitlerd      4096 Oct 13 18:31 pilot3
[2025-10-13 20:44:39] -rw-rw-r-- 1 whitlerd whitlerd      8982 Oct 13 19:06 init_data.xml
[2025-10-13 20:44:39] -rw-rw-r-- 1 whitlerd whitlerd       530 Oct 13 20:43 boinc_task_state.xml
[2025-10-13 20:44:39] -rw------- 1 whitlerd whitlerd 194925336 Oct 13 20:43 HITS.46676269._082487.pool.root.1
[2025-10-13 20:44:39] -rw------- 1 whitlerd whitlerd        95 Oct 13 20:43 pilot_heartbeat.json
[2025-10-13 20:44:39] -rw------- 1 whitlerd whitlerd      1030 Oct 13 20:43 memory_monitor_summary.json
[2025-10-13 20:44:39] -rw------- 1 whitlerd whitlerd    328155 Oct 13 20:43 log.46676269._082487.job.log.tgz.1
[2025-10-13 20:44:39] -rw------- 1 whitlerd whitlerd      7787 Oct 13 20:43 heartbeat.json
[2025-10-13 20:44:39] -rw-rw-r-- 1 whitlerd whitlerd        27 Oct 13 20:44 wrapper_checkpoint.txt
[2025-10-13 20:44:39] -rw-rw-r-- 1 whitlerd whitlerd      8192 Oct 13 20:44 boinc_mmap_file
[2025-10-13 20:44:39] -rw------- 1 whitlerd whitlerd      4838 Oct 13 20:44 pilotlog.txt
[2025-10-13 20:44:39] -rw------- 1 whitlerd whitlerd   1141588 Oct 13 20:44 log.46676269._082487.job.log.1
[2025-10-13 20:44:39] -rw------- 1 whitlerd whitlerd       357 Oct 13 20:44 output.list
[2025-10-13 20:44:39] -rw-rw-r-- 1 whitlerd whitlerd       620 Oct 13 20:44 runtime_log
[2025-10-13 20:44:39] -rw------- 1 whitlerd whitlerd   1484800 Oct 13 20:44 result.tar.gz
[2025-10-13 20:44:39] -rw-rw-r-- 1 whitlerd whitlerd      8878 Oct 13 20:44 runtime_log.err
[2025-10-13 20:44:39] -rw------- 1 whitlerd whitlerd       647 Oct 13 20:44 EptMDmLODS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmKKUMDmUyrDlm.diag
[2025-10-13 20:44:39] -rw-rw-r-- 1 whitlerd whitlerd     21244 Oct 13 20:44 stderr.txt
[2025-10-13 20:44:39] HITS file was successfully produced:
[2025-10-13 20:44:39] -rw------- 1 whitlerd whitlerd 194925336 Oct 13 20:43 shared/HITS.pool.root.1
[2025-10-13 20:44:39]  *** Contents of shared directory: ***
[2025-10-13 20:44:39] total 410064
[2025-10-13 20:44:39] -rw-r--r-- 2 whitlerd whitlerd 222892234 Oct 13 18:31 ATLAS.root_0
[2025-10-13 20:44:39] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct 13 18:31 start_atlas.sh
[2025-10-13 20:44:39] -rw-r--r-- 2 whitlerd whitlerd    569680 Oct 13 18:31 input.tar.gz
[2025-10-13 20:44:39] -rw------- 1 whitlerd whitlerd 194925336 Oct 13 20:43 HITS.pool.root.1
[2025-10-13 20:44:39] -rw------- 1 whitlerd whitlerd   1484800 Oct 13 20:44 result.tar.gz
20:44:41 (1891762): run_atlas exited; CPU time 30944.407033
20:44:41 (1891762): called boinc_finish(0)

</stderr_txt>
]]>

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