Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:23:14 (4122726): wrapper (7.7.26015): starting
18:23:14 (4122726): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 18:23:14] Arguments: --nthreads 9
[2025-10-13 18:23:14] Threads: 9
[2025-10-13 18:23:14] Checking for CVMFS
[2025-10-13 18:23:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 18:23:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 18:23:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 18:23:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 18:23:15] 2.13.2.0 2956151 131279 438692 151676 2 624 27994482 32935937 46298 16776704 0 890577701 99.726 620665366 32923 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 18:23:15] CVMFS is ok
[2025-10-13 18:23:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 18:23:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 18:23:15] Further information can be found at the LHC@home message board.
[2025-10-13 18:23:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 18:23:15] Checking for apptainer binary...
[2025-10-13 18:23:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 18:23:15] Running /usr/bin/apptainer --version
[2025-10-13 18:23:15] apptainer version 1.4.3-1.el9
[2025-10-13 18:23:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 18:23:15] c7-9-15.aglt2.org
[2025-10-13 18:23:15] apptainer works
[2025-10-13 18:23:15] Set ATHENA_PROC_NUMBER=9
[2025-10-13 18:23:15] Set ATHENA_CORE_NUMBER=9
[2025-10-13 18:23:16] Starting ATLAS job with PandaID=6837359051
[2025-10-13 18:23:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 19:22:01]  *** The last 200 lines of the pilot log: ***
[2025-10-13 19:22:01] 2025-10-13 23:20:45,468 | INFO     | time since job start (3417s) is within the limit (172800.0s)
[2025-10-13 19:22:01] 2025-10-13 23:20:45,968 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 19:22:01] 2025-10-13 23:20:46,470 | INFO     | monitor loop #240: job 0:6837359051 is in state 'finished'
[2025-10-13 19:22:01] 2025-10-13 23:20:46,471 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 19:22:01] 2025-10-13 23:20:46,554 | INFO     | job 6837359051 has state=finished
[2025-10-13 19:22:01] 2025-10-13 23:20:46,554 | INFO     | preparing for final server update for job 6837359051 in state='finished'
[2025-10-13 19:22:01] 2025-10-13 23:20:46,555 | INFO     | this job has now completed (state=finished)
[2025-10-13 19:22:01] 2025-10-13 23:20:46,555 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 19:22:01] 2025-10-13 23:20:46,555 | INFO     | log transfer has been attempted: DONE
[2025-10-13 19:22:01] 2025-10-13 23:20:46,555 | INFO     | job 6837359051 has finished - writing final server update
[2025-10-13 19:22:01] 2025-10-13 23:20:46,555 | INFO     | total number of processed events: 400 (read)
[2025-10-13 19:22:01] 2025-10-13 23:20:46,556 | INFO     | executing command: lscpu
[2025-10-13 19:22:01] 2025-10-13 23:20:46,627 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 19:22:01] 2025-10-13 23:20:47,476 | INFO     | time since job start (3419s) is within the limit (172800.0s)
[2025-10-13 19:22:01] 2025-10-13 23:20:48,985 | INFO     | monitor loop #241: job 0:6837359051 is in state 'finished'
[2025-10-13 19:22:01] 2025-10-13 23:20:48,985 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 19:22:01] 2025-10-13 23:20:49,498 | INFO     | time since job start (3421s) is within the limit (172800.0s)
[2025-10-13 19:22:01] 2025-10-13 23:20:51,492 | INFO     | monitor loop #242: job 0:6837359051 is in state 'finished'
[2025-10-13 19:22:01] 2025-10-13 23:20:51,492 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 19:22:01] 2025-10-13 23:20:51,505 | INFO     | time since job start (3423s) is within the limit (172800.0s)
[2025-10-13 19:22:01] 2025-10-13 23:20:53,512 | INFO     | time since job start (3425s) is within the limit (172800.0s)
[2025-10-13 19:22:01] 2025-10-13 23:20:53,997 | INFO     | monitor loop #243: job 0:6837359051 is in state 'finished'
[2025-10-13 19:22:01] 2025-10-13 23:20:53,997 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 19:22:01] 2025-10-13 23:20:55,522 | INFO     | time since job start (3427s) is within the limit (172800.0s)
[2025-10-13 19:22:01] 2025-10-13 23:20:56,501 | INFO     | monitor loop #244: job 0:6837359051 is in state 'finished'
[2025-10-13 19:22:01] 2025-10-13 23:20:56,501 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 19:22:01] 2025-10-13 23:20:57,097 | INFO     | PID=4132007 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 19:22:01] 2025-10-13 23:20:57,097 | INFO     | .. there are 46 such processes running
[2025-10-13 19:22:01] 2025-10-13 23:20:58,098 | INFO     | time since job start (3430s) is within the limit (172800.0s)
[2025-10-13 19:22:01] 2025-10-13 23:20:59,006 | INFO     | monitor loop #245: job 0:6837359051 is in state 'finished'
[2025-10-13 19:22:01] 2025-10-13 23:20:59,006 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 19:22:01] 2025-10-13 23:21:00,104 | INFO     | time since job start (3432s) is within the limit (172800.0s)
[2025-10-13 19:22:01] 2025-10-13 23:21:01,516 | INFO     | monitor loop #246: job 0:6837359051 is in state 'finished'
[2025-10-13 19:22:01] 2025-10-13 23:21:01,516 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 19:22:01] 2025-10-13 23:21:02,111 | INFO     | time since job start (3434s) is within the limit (172800.0s)
[2025-10-13 19:22:01] 2025-10-13 23:21:02,667 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 19:22:01] 2025-10-13 23:21:02,671 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3737.7818593750003
[2025-10-13 19:22:01] 2025-10-13 23:21:02,685 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6837359051/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 19:22:01] 2025-10-13 23:21:02,685 | INFO     | extracted standard info from prmon json
[2025-10-13 19:22:01] 2025-10-13 23:21:02,685 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 19:22:01] 2025-10-13 23:21:02,685 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 19:22:01] 2025-10-13 23:21:02,685 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 19:22:01] 2025-10-13 23:21:02,686 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 19:22:01] 2025-10-13 23:21:02,686 | INFO     | fitting pss+swap vs Time
[2025-10-13 19:22:01] 2025-10-13 23:21:02,686 | INFO     | sum of square deviations: 34277852.0
[2025-10-13 19:22:01] 2025-10-13 23:21:02,687 | INFO     | sum of deviations: 977544703.0
[2025-10-13 19:22:01] 2025-10-13 23:21:02,687 | INFO     | mean x: 1760396045.5
[2025-10-13 19:22:01] 2025-10-13 23:21:02,687 | INFO     | mean y: 2371741.625
[2025-10-13 19:22:01] 2025-10-13 23:21:02,687 | INFO     | -- intersect: -50201060768.10963
[2025-10-13 19:22:01] 2025-10-13 23:21:02,687 | INFO     | intersect: -50201060768.10963
[2025-10-13 19:22:01] 2025-10-13 23:21:02,687 | INFO     | chi2: 0.007824919838605242
[2025-10-13 19:22:01] 2025-10-13 23:21:02,687 | INFO     | -- intersect: -50201060768.10963
[2025-10-13 19:22:01] 2025-10-13 23:21:02,687 | INFO     | current memory leak: 28.52 B/s (using 48 data points, chi2=0.01)
[2025-10-13 19:22:01] 2025-10-13 23:21:02,687 | INFO     | could have reported an average CPU frequency of 3756 MHz (5 samples)
[2025-10-13 19:22:01] 2025-10-13 23:21:02,687 | INFO     | ..............................
[2025-10-13 19:22:01] 2025-10-13 23:21:02,687 | INFO     | . Timing measurements:
[2025-10-13 19:22:01] 2025-10-13 23:21:02,687 | INFO     | . get job = 0 s
[2025-10-13 19:22:01] 2025-10-13 23:21:02,687 | INFO     | . initial setup = 3 s
[2025-10-13 19:22:01] 2025-10-13 23:21:02,687 | INFO     | . payload setup = 19 s
[2025-10-13 19:22:01] 2025-10-13 23:21:02,687 | INFO     | . stage-in = 0 s
[2025-10-13 19:22:01] 2025-10-13 23:21:02,687 | INFO     | . payload execution = 3351 s
[2025-10-13 19:22:01] 2025-10-13 23:21:02,687 | INFO     | . stage-out = 0 s
[2025-10-13 19:22:01] 2025-10-13 23:21:02,687 | INFO     | . log creation = 0 s
[2025-10-13 19:22:01] 2025-10-13 23:21:02,687 | INFO     | ..............................
[2025-10-13 19:22:01] 2025-10-13 23:21:02,749 | INFO     | 
[2025-10-13 19:22:01] 2025-10-13 23:21:02,749 | INFO     | job summary report
[2025-10-13 19:22:01] 2025-10-13 23:21:02,749 | INFO     | --------------------------------------------------
[2025-10-13 19:22:01] 2025-10-13 23:21:02,749 | INFO     | PanDA job id: 6837359051
[2025-10-13 19:22:01] 2025-10-13 23:21:02,749 | INFO     | task id: 46676269
[2025-10-13 19:22:01] 2025-10-13 23:21:02,749 | INFO     | errors: (none)
[2025-10-13 19:22:01] 2025-10-13 23:21:02,749 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 19:22:01] 2025-10-13 23:21:02,749 | INFO     | pilot state: finished 
[2025-10-13 19:22:01] 2025-10-13 23:21:02,749 | INFO     | transexitcode: 0
[2025-10-13 19:22:01] 2025-10-13 23:21:02,750 | INFO     | exeerrorcode: 0
[2025-10-13 19:22:01] 2025-10-13 23:21:02,750 | INFO     | exeerrordiag: 
[2025-10-13 19:22:01] 2025-10-13 23:21:02,750 | INFO     | exitcode: 0
[2025-10-13 19:22:01] 2025-10-13 23:21:02,750 | INFO     | exitmsg: OK
[2025-10-13 19:22:01] 2025-10-13 23:21:02,750 | INFO     | cpuconsumptiontime: 21888 s
[2025-10-13 19:22:01] 2025-10-13 23:21:02,750 | INFO     | nevents: 400
[2025-10-13 19:22:01] 2025-10-13 23:21:02,750 | INFO     | neventsw: 0
[2025-10-13 19:22:01] 2025-10-13 23:21:02,750 | INFO     | pid: 4167694
[2025-10-13 19:22:01] 2025-10-13 23:21:02,750 | INFO     | pgrp: 4167694
[2025-10-13 19:22:01] 2025-10-13 23:21:02,750 | INFO     | corecount: 9
[2025-10-13 19:22:01] 2025-10-13 23:21:02,750 | INFO     | event service: False
[2025-10-13 19:22:01] 2025-10-13 23:21:02,750 | INFO     | sizes: {0: 2348678, 1: 2348877, 12: 2348877, 14: 2349167, 23: 2349195, 3374: 2374993, 3375: 2383991, 3377: 2384047, 3394: 2384273}
[2025-10-13 19:22:01] 2025-10-13 23:21:02,750 | INFO     | --------------------------------------------------
[2025-10-13 19:22:01] 2025-10-13 23:21:02,750 | INFO     | 
[2025-10-13 19:22:01] 2025-10-13 23:21:02,750 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 19:22:01] 2025-10-13 23:21:02,772 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 19:22:01] 2025-10-13 23:21:02,773 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 19:22:01] 2025-10-13 23:21:02,773 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 19:22:01] 2025-10-13 23:21:02,773 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 19:22:01] 2025-10-13 23:21:02,773 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 19:22:01] 2025-10-13 23:21:02,773 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 19:22:01] 2025-10-13 23:21:02,773 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 19:22:01] 2025-10-13 23:21:02,773 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 19:22:01] 2025-10-13 23:21:02,773 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 19:22:01] 2025-10-13 23:21:02,773 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 19:22:01] 2025-10-13 23:21:02,773 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 19:22:01] 2025-10-13 23:21:02,773 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 19:22:01] 2025-10-13 23:21:02,773 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 19:22:01] 2025-10-13 23:21:02,773 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 19:22:01] 2025-10-13 23:21:02,773 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 19:22:01] 2025-10-13 23:21:02,773 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 19:22:01] 2025-10-13 23:21:02,773 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 19:22:01] 2025-10-13 23:21:02,773 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 19:22:01] 2025-10-13 23:21:02,773 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 19:22:01] 2025-10-13 23:21:02,773 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 19:22:01] 2025-10-13 23:21:02,773 | INFO     | job 6837359051 has completed (purged errors)
[2025-10-13 19:22:01] 2025-10-13 23:21:02,774 | INFO     | overall cleanup function is called
[2025-10-13 19:22:01] 2025-10-13 23:21:03,781 | INFO     | --- collectZombieJob: --- 10, [4167694]
[2025-10-13 19:22:01] 2025-10-13 23:21:03,781 | INFO     | zombie collector waiting for pid 4167694
[2025-10-13 19:22:01] 2025-10-13 23:21:03,781 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 19:22:01] 2025-10-13 23:21:03,781 | INFO     | collected zombie processes
[2025-10-13 19:22:01] 2025-10-13 23:21:03,781 | INFO     | will attempt to kill all subprocesses of pid=4167694
[2025-10-13 19:22:01] 2025-10-13 23:21:04,393 | INFO     | process IDs to be killed: [4167694] (in reverse order)
[2025-10-13 19:22:01] 2025-10-13 23:21:04,623 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 19:22:01] 2025-10-13 23:21:04,623 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 19:22:01] 2025-10-13 23:21:04,645 | INFO     | did not find any defunct processes belonging to 4167694
[2025-10-13 19:22:01] 2025-10-13 23:21:04,666 | INFO     | did not find any defunct processes belonging to 4167694
[2025-10-13 19:22:01] 2025-10-13 23:21:04,666 | INFO     | ready for new job
[2025-10-13 19:22:01] 2025-10-13 23:21:04,667 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 19:22:01] 2025-10-13 23:21:04,667 | INFO     | ***************************************
[2025-10-13 19:22:01] 2025-10-13 23:21:04,667 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 19:22:01] 2025-10-13 23:21:04,667 | INFO     | ***************************************
[2025-10-13 19:22:01] 2025-10-13 23:21:04,667 | INFO     | 
[2025-10-13 19:22:01] 2025-10-13 23:21:04,686 | INFO     | architecture information:
[2025-10-13 19:22:01] 2025-10-13 23:21:04,686 | INFO     | executing command: cat /etc/os-release
[2025-10-13 19:22:01] 2025-10-13 23:21:04,731 | INFO     | cat /etc/os-release:
[2025-10-13 19:22:01] NAME="CentOS Linux"
[2025-10-13 19:22:01] VERSION="7 (Core)"
[2025-10-13 19:22:01] ID="centos"
[2025-10-13 19:22:01] ID_LIKE="rhel fedora"
[2025-10-13 19:22:01] VERSION_ID="7"
[2025-10-13 19:22:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 19:22:01] ANSI_COLOR="0;31"
[2025-10-13 19:22:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 19:22:01] HOME_URL="https://www.centos.org/"
[2025-10-13 19:22:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 19:22:01] 
[2025-10-13 19:22:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 19:22:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 19:22:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 19:22:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 19:22:01] 
[2025-10-13 19:22:01] 2025-10-13 23:21:04,732 | INFO     | ***************************************
[2025-10-13 19:22:01] 2025-10-13 23:21:05,234 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 19:22:01] 2025-10-13 23:21:05,294 | INFO     | sufficient remaining disk space (75408343040 B)
[2025-10-13 19:22:01] 2025-10-13 23:21:05,294 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 19:22:01] 2025-10-13 23:21:05,294 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 19:22:01] 2025-10-13 23:21:05,294 | INFO     | update_server=False
[2025-10-13 19:22:01] 2025-10-13 23:21:05,294 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 19:22:01] 2025-10-13 23:21:05,295 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 19:22:01] 2025-10-13 23:21:05,295 | INFO     | aborting loop
[2025-10-13 19:22:01] 2025-10-13 23:21:05,562 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 19:22:01] 2025-10-13 23:21:06,300 | INFO     | [job] retrieve thread has finished
[2025-10-13 19:22:01] 2025-10-13 23:21:06,301 | INFO     | [job] job monitor thread has finished
[2025-10-13 19:22:01] 2025-10-13 23:21:06,396 | INFO     | all data control threads have been joined
[2025-10-13 19:22:01] 2025-10-13 23:21:06,402 | INFO     | all payload control threads have been joined
[2025-10-13 19:22:01] 2025-10-13 23:21:06,443 | INFO     | [payload] validate_post thread has finished
[2025-10-13 19:22:01] 2025-10-13 23:21:06,461 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 19:22:01] 2025-10-13 23:21:06,482 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 19:22:01] 2025-10-13 23:21:06,627 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 19:22:01] 2025-10-13 23:21:06,665 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 19:22:01] 2025-10-13 23:21:06,724 | INFO     | [job] validate thread has finished
[2025-10-13 19:22:01] 2025-10-13 23:21:06,942 | INFO     | all job control threads have been joined
[2025-10-13 19:22:01] 2025-10-13 23:21:07,220 | INFO     | [data] copytool_in thread has finished
[2025-10-13 19:22:01] 2025-10-13 23:21:07,386 | INFO     | [payload] failed_post thread has finished
[2025-10-13 19:22:01] 2025-10-13 23:21:07,402 | INFO     | [data] control thread has finished
[2025-10-13 19:22:01] 2025-10-13 23:21:07,408 | INFO     | [payload] control thread has finished
[2025-10-13 19:22:01] 2025-10-13 23:21:07,767 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 19:22:01] 2025-10-13 23:21:07,948 | INFO     | [job] control thread has finished
[2025-10-13 19:22:01] 2025-10-13 23:21:08,636 | INFO     | [data] copytool_out thread has finished
[2025-10-13 19:22:01] 2025-10-13 23:21:08,773 | INFO     | [job] queue monitor thread has finished
[2025-10-13 19:22:01] 2025-10-13 23:21:09,571 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 19:22:01] 2025-10-13 23:21:15,645 | INFO     | job.realtimelogging is not enabled
[2025-10-13 19:22:01] 2025-10-13 23:21:16,651 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 19:22:01] 2025-10-13 23:21:35,666 | INFO     | PID=4132007 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 19:22:01] 2025-10-13 23:21:35,667 | INFO     | .. there are 46 such processes running
[2025-10-13 19:22:01] 2025-10-13 23:21:35,667 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 19:22:01] 2025-10-13 23:21:35,667 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 19:22:01] 2025-10-13 23:21:35,667 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 19:22:01] 2025-10-13 23:21:53,942 | INFO     | [monitor] cgroup control has ended
[2025-10-13 19:22:01] 2025-10-13 23:21:55,253 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139706124830528)>', '<ExcThread(monitor, started 139705395955456)>']
[2025-10-13 19:22:01] 2025-10-13 23:21:55,788 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 19:22:01] 2025-10-13 23:21:55,788 | INFO     | [monitor] control thread has ended
[2025-10-13 19:22:01] 2025-10-13 23:22:00,280 | INFO     | all workflow threads have been joined
[2025-10-13 19:22:01] 2025-10-13 23:22:00,280 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 19:22:01] 2025-10-13 23:22:00,280 | INFO     | traces error code: 0
[2025-10-13 19:22:01] 2025-10-13 23:22:00,281 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 19:22:01] 2025-10-13 23:22:01,316 [wrapper] ==== pilot stdout END ====
[2025-10-13 19:22:01] 2025-10-13 23:22:01,318 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 19:22:01] 2025-10-13 23:22:01,319 [wrapper] pilotpid: 4132007
[2025-10-13 19:22:01] 2025-10-13 23:22:01,320 [wrapper] Pilot exit status: 0
[2025-10-13 19:22:01] 2025-10-13 23:22:01,343 [wrapper] pandaids: 6837359051
[2025-10-13 19:22:01] 2025-10-13 23:22:01,446 [wrapper] cleanup supervisor_pilot  668684 4132008
[2025-10-13 19:22:01] 2025-10-13 23:22:01,448 [wrapper] Test setup, not cleaning
[2025-10-13 19:22:01] 2025-10-13 23:22:01,462 [wrapper] apfmon messages muted
[2025-10-13 19:22:01] 2025-10-13 23:22:01,500 [wrapper] ==== wrapper stdout END ====
[2025-10-13 19:22:01] 2025-10-13 23:22:01,506 [wrapper] ==== wrapper stderr END ====
[2025-10-13 19:22:01]  *** Error codes and diagnostics ***
[2025-10-13 19:22:01]     "exeErrorCode": 0,
[2025-10-13 19:22:01]     "exeErrorDiag": "",
[2025-10-13 19:22:01]     "pilotErrorCode": 0,
[2025-10-13 19:22:01]     "pilotErrorDiag": "",
[2025-10-13 19:22:01]  *** Listing of results directory ***
[2025-10-13 19:22:01] total 405268
[2025-10-13 19:22:01] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 15:01 queuedata.json
[2025-10-13 19:22:01] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 15:01 pilot3.tar.gz
[2025-10-13 19:22:01] -rwx------. 1 boincer umatlas     36292 Oct  9 15:01 runpilot2-wrapper.sh
[2025-10-13 19:22:01] -rw-r--r--. 1 boincer umatlas       100 Oct 13 18:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 19:22:01] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 18:23 run_atlas
[2025-10-13 19:22:01] -rw-r--r--. 1 boincer umatlas       105 Oct 13 18:23 job.xml
[2025-10-13 19:22:01] -rw-r--r--. 2 boincer umatlas 220645408 Oct 13 18:23 EVNT.46676267._001023.pool.root.1
[2025-10-13 19:22:01] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 18:23 start_atlas.sh
[2025-10-13 19:22:01] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 18:23 shared
[2025-10-13 19:22:01] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 18:23 input.tar.gz
[2025-10-13 19:22:01] -rw-r--r--. 1 boincer umatlas         0 Oct 13 18:23 boinc_lockfile
[2025-10-13 19:22:01] -rw-r--r--. 1 boincer umatlas      2546 Oct 13 18:23 pandaJob.out
[2025-10-13 19:22:01] -rw-------. 1 boincer umatlas    972799 Oct 13 18:23 agis_schedconf.cvmfs.json
[2025-10-13 19:22:01] -rw-------. 1 boincer umatlas   1560580 Oct 13 18:23 agis_ddmendpoints.agis.ALL.json
[2025-10-13 19:22:01] drwx------. 5 boincer umatlas      4096 Oct 13 18:23 pilot3
[2025-10-13 19:22:01] -rw-r--r--. 1 boincer umatlas      7160 Oct 13 19:18 init_data.xml
[2025-10-13 19:22:01] -rw-------. 1 boincer umatlas 188827054 Oct 13 19:20 HITS.46676269._024731.pool.root.1
[2025-10-13 19:22:01] -rw-r--r--. 1 boincer umatlas       529 Oct 13 19:20 boinc_task_state.xml
[2025-10-13 19:22:01] -rw-------. 1 boincer umatlas      1035 Oct 13 19:20 memory_monitor_summary.json
[2025-10-13 19:22:01] -rw-------. 1 boincer umatlas    309389 Oct 13 19:20 log.46676269._024731.job.log.tgz.1
[2025-10-13 19:22:01] -rw-------. 1 boincer umatlas        95 Oct 13 19:20 pilot_heartbeat.json
[2025-10-13 19:22:01] -rw-------. 1 boincer umatlas      7772 Oct 13 19:21 heartbeat.json
[2025-10-13 19:22:01] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 19:21 boinc_mmap_file
[2025-10-13 19:22:01] -rw-r--r--. 1 boincer umatlas        27 Oct 13 19:21 wrapper_checkpoint.txt
[2025-10-13 19:22:01] -rw-------. 1 boincer umatlas      4896 Oct 13 19:22 pilotlog.txt
[2025-10-13 19:22:01] -rw-------. 1 boincer umatlas    502868 Oct 13 19:22 log.46676269._024731.job.log.1
[2025-10-13 19:22:01] -rw-------. 1 boincer umatlas       357 Oct 13 19:22 output.list
[2025-10-13 19:22:01] -rw-r--r--. 1 boincer umatlas       620 Oct 13 19:22 runtime_log
[2025-10-13 19:22:01] -rw-------. 1 boincer umatlas    829440 Oct 13 19:22 result.tar.gz
[2025-10-13 19:22:01] -rw-r--r--. 1 boincer umatlas      8698 Oct 13 19:22 runtime_log.err
[2025-10-13 19:22:01] -rw-------. 1 boincer umatlas       651 Oct 13 19:22 L84MDmp4AR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmA7aNDm0fwK5m.diag
[2025-10-13 19:22:01] -rw-r--r--. 1 boincer umatlas     22257 Oct 13 19:22 stderr.txt
[2025-10-13 19:22:01] HITS file was successfully produced:
[2025-10-13 19:22:01] -rw-------. 1 boincer umatlas 188827054 Oct 13 19:20 shared/HITS.pool.root.1
[2025-10-13 19:22:01]  *** Contents of shared directory: ***
[2025-10-13 19:22:01] total 401272
[2025-10-13 19:22:01] -rw-r--r--. 2 boincer umatlas 220645408 Oct 13 18:23 ATLAS.root_0
[2025-10-13 19:22:01] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 18:23 start_atlas.sh
[2025-10-13 19:22:01] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 18:23 input.tar.gz
[2025-10-13 19:22:01] -rw-------. 1 boincer umatlas 188827054 Oct 13 19:20 HITS.pool.root.1
[2025-10-13 19:22:01] -rw-------. 1 boincer umatlas    829440 Oct 13 19:22 result.tar.gz
19:22:03 (4122726): run_atlas exited; CPU time 21957.969601
19:22:03 (4122726): called boinc_finish(0)

</stderr_txt>
]]>

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