Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:22:42 (4111184): wrapper (7.7.26015): starting
18:22:42 (4111184): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 18:22:42] Arguments: --nthreads 9
[2025-10-13 18:22:42] Threads: 9
[2025-10-13 18:22:42] Checking for CVMFS
[2025-10-13 18:22:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 18:22:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 18:22:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 18:22:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 18:22:43] 2.13.2.0 2956151 131279 437668 151676 3 621 27985804 32935937 46169 16776704 0 890555874 99.726 620665366 32923 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 18:22:43] CVMFS is ok
[2025-10-13 18:22:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 18:22:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 18:22:43] Further information can be found at the LHC@home message board.
[2025-10-13 18:22:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 18:22:43] Checking for apptainer binary...
[2025-10-13 18:22:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 18:22:43] Running /usr/bin/apptainer --version
[2025-10-13 18:22:43] apptainer version 1.4.3-1.el9
[2025-10-13 18:22:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 18:22:43] c7-9-15.aglt2.org
[2025-10-13 18:22:43] apptainer works
[2025-10-13 18:22:43] Set ATHENA_PROC_NUMBER=9
[2025-10-13 18:22:43] Set ATHENA_CORE_NUMBER=9
[2025-10-13 18:22:43] Starting ATLAS job with PandaID=6836602353
[2025-10-13 18:22:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 19:48:25]  *** The last 200 lines of the pilot log: ***
[2025-10-13 19:48:25] 2025-10-13 23:47:34,227 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6836602353/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 19:48:25] 2025-10-13 23:47:34,227 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-13 19:48:25] 2025-10-13 23:47:34,227 | WARNING  | maxPSS not found in memory monitor output
[2025-10-13 19:48:25] 2025-10-13 23:47:34,228 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3802657 B
[2025-10-13 19:48:25] 2025-10-13 23:47:34,228 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15386 B
[2025-10-13 19:48:25] 2025-10-13 23:47:34,228 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 19:48:25] 2025-10-13 23:47:34,251 | INFO     | sufficient remaining disk space (76595331072 B)
[2025-10-13 19:48:25] 2025-10-13 23:47:34,251 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-13 19:48:25] 2025-10-13 23:47:34,252 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6836602353: 4104094 B (within 2537553920 B limit)
[2025-10-13 19:48:25] 2025-10-13 23:47:34,252 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6836602353/HITS.46676269._008988.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-13 19:48:25] 2025-10-13 23:47:34,252 | INFO     | total size of present files: 0 B (workdir size: 4104094 B)
[2025-10-13 19:48:25] 2025-10-13 23:47:34,252 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6836602353/HITS.46676269._008988.pool.root.1 since it does not exist
[2025-10-13 19:48:25] 2025-10-13 23:47:34,600 | INFO     | number of running child processes to parent process 4143588: 1
[2025-10-13 19:48:25] 2025-10-13 23:47:34,600 | INFO     | maximum number of monitored processes: 6
[2025-10-13 19:48:25] 2025-10-13 23:47:35,214 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 19:48:25] 2025-10-13 23:47:35,376 | INFO     | time since job start (5065s) is within the limit (172800.0s)
[2025-10-13 19:48:25] 2025-10-13 23:47:35,377 | INFO     | 5067s have passed since pilot start - server update state is 'RUNNING'
[2025-10-13 19:48:25] 2025-10-13 23:47:37,041 | INFO     | job 6836602353 has state=finished
[2025-10-13 19:48:25] 2025-10-13 23:47:37,041 | INFO     | preparing for final server update for job 6836602353 in state='finished'
[2025-10-13 19:48:25] 2025-10-13 23:47:37,041 | INFO     | this job has now completed (state=finished)
[2025-10-13 19:48:25] 2025-10-13 23:47:37,042 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 19:48:25] 2025-10-13 23:47:37,042 | INFO     | log transfer has been attempted: DONE
[2025-10-13 19:48:25] 2025-10-13 23:47:37,042 | INFO     | job 6836602353 has finished - writing final server update
[2025-10-13 19:48:25] 2025-10-13 23:47:37,042 | INFO     | total number of processed events: 400 (read)
[2025-10-13 19:48:25] 2025-10-13 23:47:37,046 | INFO     | executing command: lscpu
[2025-10-13 19:48:25] 2025-10-13 23:47:37,107 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 19:48:25] 2025-10-13 23:47:37,112 | INFO     | monitor loop #355: job 0:6836602353 is in state 'finished'
[2025-10-13 19:48:25] 2025-10-13 23:47:37,112 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 19:48:25] 2025-10-13 23:47:37,383 | INFO     | time since job start (5067s) is within the limit (172800.0s)
[2025-10-13 19:48:25] 2025-10-13 23:47:39,389 | INFO     | time since job start (5069s) is within the limit (172800.0s)
[2025-10-13 19:48:25] 2025-10-13 23:47:39,615 | INFO     | monitor loop #356: job 0:6836602353 is in state 'finished'
[2025-10-13 19:48:25] 2025-10-13 23:47:39,615 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 19:48:25] 2025-10-13 23:47:41,397 | INFO     | time since job start (5071s) is within the limit (172800.0s)
[2025-10-13 19:48:25] 2025-10-13 23:47:42,120 | INFO     | monitor loop #357: job 0:6836602353 is in state 'finished'
[2025-10-13 19:48:25] 2025-10-13 23:47:42,120 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 19:48:25] 2025-10-13 23:47:42,938 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 19:48:25] 2025-10-13 23:47:42,944 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3795.6903437499964
[2025-10-13 19:48:25] 2025-10-13 23:47:42,958 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6836602353/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 19:48:25] 2025-10-13 23:47:42,959 | INFO     | extracted standard info from prmon json
[2025-10-13 19:48:25] 2025-10-13 23:47:42,959 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 19:48:25] 2025-10-13 23:47:42,959 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 19:48:25] 2025-10-13 23:47:42,959 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 19:48:25] 2025-10-13 23:47:42,959 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 19:48:25] 2025-10-13 23:47:42,961 | INFO     | fitting pss+swap vs Time
[2025-10-13 19:48:25] 2025-10-13 23:47:42,961 | INFO     | sum of square deviations: 130793150.0
[2025-10-13 19:48:25] 2025-10-13 23:47:42,961 | INFO     | sum of deviations: -2348418687.0
[2025-10-13 19:48:25] 2025-10-13 23:47:42,961 | INFO     | mean x: 1760396828.0
[2025-10-13 19:48:25] 2025-10-13 23:47:42,961 | INFO     | mean y: 2325104.44
[2025-10-13 19:48:25] 2025-10-13 23:47:42,961 | INFO     | -- intersect: 31610622690.442974
[2025-10-13 19:48:25] 2025-10-13 23:47:42,961 | INFO     | intersect: 31610622690.442974
[2025-10-13 19:48:25] 2025-10-13 23:47:42,962 | INFO     | chi2: 0.023742604976534232
[2025-10-13 19:48:25] 2025-10-13 23:47:42,962 | INFO     | -- intersect: 31610622690.442974
[2025-10-13 19:48:25] 2025-10-13 23:47:42,962 | INFO     | current memory leak: -17.96 B/s (using 75 data points, chi2=0.02)
[2025-10-13 19:48:25] 2025-10-13 23:47:42,962 | INFO     | could have reported an average CPU frequency of 3758 MHz (6 samples)
[2025-10-13 19:48:25] 2025-10-13 23:47:42,964 | INFO     | ..............................
[2025-10-13 19:48:25] 2025-10-13 23:47:42,964 | INFO     | . Timing measurements:
[2025-10-13 19:48:25] 2025-10-13 23:47:42,964 | INFO     | . get job = 0 s
[2025-10-13 19:48:25] 2025-10-13 23:47:42,964 | INFO     | . initial setup = 3 s
[2025-10-13 19:48:25] 2025-10-13 23:47:42,964 | INFO     | . payload setup = 19 s
[2025-10-13 19:48:25] 2025-10-13 23:47:42,964 | INFO     | . stage-in = 0 s
[2025-10-13 19:48:25] 2025-10-13 23:47:42,964 | INFO     | . payload execution = 5000 s
[2025-10-13 19:48:25] 2025-10-13 23:47:42,964 | INFO     | . stage-out = 0 s
[2025-10-13 19:48:25] 2025-10-13 23:47:42,964 | INFO     | . log creation = 0 s
[2025-10-13 19:48:25] 2025-10-13 23:47:42,964 | INFO     | ..............................
[2025-10-13 19:48:25] 2025-10-13 23:47:43,015 | INFO     | 
[2025-10-13 19:48:25] 2025-10-13 23:47:43,016 | INFO     | job summary report
[2025-10-13 19:48:25] 2025-10-13 23:47:43,016 | INFO     | --------------------------------------------------
[2025-10-13 19:48:25] 2025-10-13 23:47:43,016 | INFO     | PanDA job id: 6836602353
[2025-10-13 19:48:25] 2025-10-13 23:47:43,016 | INFO     | task id: 46676269
[2025-10-13 19:48:25] 2025-10-13 23:47:43,016 | INFO     | errors: (none)
[2025-10-13 19:48:25] 2025-10-13 23:47:43,016 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 19:48:25] 2025-10-13 23:47:43,016 | INFO     | pilot state: finished 
[2025-10-13 19:48:25] 2025-10-13 23:47:43,016 | INFO     | transexitcode: 0
[2025-10-13 19:48:25] 2025-10-13 23:47:43,016 | INFO     | exeerrorcode: 0
[2025-10-13 19:48:25] 2025-10-13 23:47:43,016 | INFO     | exeerrordiag: 
[2025-10-13 19:48:25] 2025-10-13 23:47:43,016 | INFO     | exitcode: 0
[2025-10-13 19:48:25] 2025-10-13 23:47:43,016 | INFO     | exitmsg: OK
[2025-10-13 19:48:25] 2025-10-13 23:47:43,016 | INFO     | cpuconsumptiontime: 23807 s
[2025-10-13 19:48:25] 2025-10-13 23:47:43,016 | INFO     | nevents: 400
[2025-10-13 19:48:25] 2025-10-13 23:47:43,016 | INFO     | neventsw: 0
[2025-10-13 19:48:25] 2025-10-13 23:47:43,016 | INFO     | pid: 4143588
[2025-10-13 19:48:25] 2025-10-13 23:47:43,016 | INFO     | pgrp: 4143588
[2025-10-13 19:48:25] 2025-10-13 23:47:43,016 | INFO     | corecount: 9
[2025-10-13 19:48:25] 2025-10-13 23:47:43,016 | INFO     | event service: False
[2025-10-13 19:48:25] 2025-10-13 23:47:43,016 | INFO     | sizes: {0: 2348852, 11: 2348852, 12: 2349142, 22: 2349170, 5024: 2384551, 5027: 2384675, 5035: 2384997}
[2025-10-13 19:48:25] 2025-10-13 23:47:43,016 | INFO     | --------------------------------------------------
[2025-10-13 19:48:25] 2025-10-13 23:47:43,016 | INFO     | 
[2025-10-13 19:48:25] 2025-10-13 23:47:43,017 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 19:48:25] 2025-10-13 23:47:43,035 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 19:48:25] 2025-10-13 23:47:43,035 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 19:48:25] 2025-10-13 23:47:43,035 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 19:48:25] 2025-10-13 23:47:43,035 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 19:48:25] 2025-10-13 23:47:43,035 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 19:48:25] 2025-10-13 23:47:43,035 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 19:48:25] 2025-10-13 23:47:43,035 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 19:48:25] 2025-10-13 23:47:43,035 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 19:48:25] 2025-10-13 23:47:43,035 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 19:48:25] 2025-10-13 23:47:43,035 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 19:48:25] 2025-10-13 23:47:43,035 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 19:48:25] 2025-10-13 23:47:43,035 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 19:48:25] 2025-10-13 23:47:43,035 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 19:48:25] 2025-10-13 23:47:43,035 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 19:48:25] 2025-10-13 23:47:43,036 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 19:48:25] 2025-10-13 23:47:43,036 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 19:48:25] 2025-10-13 23:47:43,036 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 19:48:25] 2025-10-13 23:47:43,036 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 19:48:25] 2025-10-13 23:47:43,036 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 19:48:25] 2025-10-13 23:47:43,036 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 19:48:25] 2025-10-13 23:47:43,036 | INFO     | job 6836602353 has completed (purged errors)
[2025-10-13 19:48:25] 2025-10-13 23:47:43,036 | INFO     | overall cleanup function is called
[2025-10-13 19:48:25] 2025-10-13 23:47:44,043 | INFO     | --- collectZombieJob: --- 10, [4143588]
[2025-10-13 19:48:25] 2025-10-13 23:47:44,043 | INFO     | zombie collector waiting for pid 4143588
[2025-10-13 19:48:25] 2025-10-13 23:47:44,043 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 19:48:25] 2025-10-13 23:47:44,043 | INFO     | collected zombie processes
[2025-10-13 19:48:25] 2025-10-13 23:47:44,043 | INFO     | will attempt to kill all subprocesses of pid=4143588
[2025-10-13 19:48:25] 2025-10-13 23:47:44,392 | INFO     | process IDs to be killed: [4143588] (in reverse order)
[2025-10-13 19:48:25] 2025-10-13 23:47:44,551 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 19:48:25] 2025-10-13 23:47:44,552 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 19:48:25] 2025-10-13 23:47:44,575 | INFO     | did not find any defunct processes belonging to 4143588
[2025-10-13 19:48:25] 2025-10-13 23:47:44,599 | INFO     | did not find any defunct processes belonging to 4143588
[2025-10-13 19:48:25] 2025-10-13 23:47:44,600 | INFO     | ready for new job
[2025-10-13 19:48:25] 2025-10-13 23:47:44,600 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 19:48:25] 2025-10-13 23:47:44,601 | INFO     | ***************************************
[2025-10-13 19:48:25] 2025-10-13 23:47:44,601 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 19:48:25] 2025-10-13 23:47:44,601 | INFO     | ***************************************
[2025-10-13 19:48:25] 2025-10-13 23:47:44,601 | INFO     | 
[2025-10-13 19:48:25] 2025-10-13 23:47:44,619 | INFO     | architecture information:
[2025-10-13 19:48:25] 2025-10-13 23:47:44,620 | INFO     | executing command: cat /etc/os-release
[2025-10-13 19:48:25] 2025-10-13 23:47:44,636 | INFO     | cat /etc/os-release:
[2025-10-13 19:48:25] NAME="CentOS Linux"
[2025-10-13 19:48:25] VERSION="7 (Core)"
[2025-10-13 19:48:25] ID="centos"
[2025-10-13 19:48:25] ID_LIKE="rhel fedora"
[2025-10-13 19:48:25] VERSION_ID="7"
[2025-10-13 19:48:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 19:48:25] ANSI_COLOR="0;31"
[2025-10-13 19:48:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 19:48:25] HOME_URL="https://www.centos.org/"
[2025-10-13 19:48:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 19:48:25] 
[2025-10-13 19:48:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 19:48:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 19:48:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 19:48:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 19:48:25] 
[2025-10-13 19:48:25] 2025-10-13 23:47:44,637 | INFO     | ***************************************
[2025-10-13 19:48:25] 2025-10-13 23:47:45,139 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 19:48:25] 2025-10-13 23:47:45,157 | INFO     | sufficient remaining disk space (76600573952 B)
[2025-10-13 19:48:25] 2025-10-13 23:47:45,157 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 19:48:25] 2025-10-13 23:47:45,158 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 19:48:25] 2025-10-13 23:47:45,158 | INFO     | update_server=False
[2025-10-13 19:48:25] 2025-10-13 23:47:45,158 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 19:48:25] 2025-10-13 23:47:45,160 | INFO     | all data control threads have been joined
[2025-10-13 19:48:25] 2025-10-13 23:47:45,390 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 19:48:25] 2025-10-13 23:47:45,630 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 19:48:25] 2025-10-13 23:47:45,630 | INFO     | aborting loop
[2025-10-13 19:48:25] 2025-10-13 23:47:45,761 | INFO     | all payload control threads have been joined
[2025-10-13 19:48:25] 2025-10-13 23:47:45,779 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 19:48:25] 2025-10-13 23:47:46,163 | INFO     | [job] retrieve thread has finished
[2025-10-13 19:48:25] 2025-10-13 23:47:46,165 | INFO     | [data] control thread has finished
[2025-10-13 19:48:25] 2025-10-13 23:47:46,187 | INFO     | [payload] failed_post thread has finished
[2025-10-13 19:48:25] 2025-10-13 23:47:46,289 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 19:48:25] 2025-10-13 23:47:46,635 | INFO     | [job] job monitor thread has finished
[2025-10-13 19:48:25] 2025-10-13 23:47:46,766 | INFO     | [payload] control thread has finished
[2025-10-13 19:48:25] 2025-10-13 23:47:46,780 | INFO     | all job control threads have been joined
[2025-10-13 19:48:25] 2025-10-13 23:47:47,245 | INFO     | [payload] validate_post thread has finished
[2025-10-13 19:48:25] 2025-10-13 23:47:47,378 | INFO     | [data] copytool_in thread has finished
[2025-10-13 19:48:25] 2025-10-13 23:47:47,396 | INFO     | [data] copytool_out thread has finished
[2025-10-13 19:48:25] 2025-10-13 23:47:47,412 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 19:48:25] 2025-10-13 23:47:47,446 | INFO     | [job] validate thread has finished
[2025-10-13 19:48:25] 2025-10-13 23:47:47,465 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 19:48:25] 2025-10-13 23:47:47,785 | INFO     | [job] control thread has finished
[2025-10-13 19:48:25] 2025-10-13 23:47:48,026 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 19:48:25] 2025-10-13 23:47:49,031 | INFO     | [job] queue monitor thread has finished
[2025-10-13 19:48:25] 2025-10-13 23:47:49,788 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 19:48:25] 2025-10-13 23:47:55,789 | INFO     | job.realtimelogging is not enabled
[2025-10-13 19:48:25] 2025-10-13 23:47:56,794 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 19:48:25] 2025-10-13 23:48:14,986 | INFO     | PID=4118154 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 19:48:25] 2025-10-13 23:48:14,986 | INFO     | .. there are 42 such processes running
[2025-10-13 19:48:25] 2025-10-13 23:48:14,986 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 19:48:25] 2025-10-13 23:48:14,986 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 19:48:25] 2025-10-13 23:48:14,986 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 19:48:25] 2025-10-13 23:48:18,999 | INFO     | [monitor] cgroup control has ended
[2025-10-13 19:48:25] 2025-10-13 23:48:20,415 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140054975018816)>', '<ExcThread(monitor, started 140054018111232)>']
[2025-10-13 19:48:25] 2025-10-13 23:48:21,021 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 19:48:25] 2025-10-13 23:48:21,021 | INFO     | [monitor] control thread has ended
[2025-10-13 19:48:25] 2025-10-13 23:48:25,441 | INFO     | all workflow threads have been joined
[2025-10-13 19:48:25] 2025-10-13 23:48:25,441 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 19:48:25] 2025-10-13 23:48:25,441 | INFO     | traces error code: 0
[2025-10-13 19:48:25] 2025-10-13 23:48:25,441 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 19:48:25] 2025-10-13 23:48:25,616 [wrapper] ==== pilot stdout END ====
[2025-10-13 19:48:25] 2025-10-13 23:48:25,618 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 19:48:25] 2025-10-13 23:48:25,620 [wrapper] pilotpid: 4118154
[2025-10-13 19:48:25] 2025-10-13 23:48:25,622 [wrapper] Pilot exit status: 0
[2025-10-13 19:48:25] 2025-10-13 23:48:25,644 [wrapper] pandaids: 6836602353
[2025-10-13 19:48:25] 2025-10-13 23:48:25,748 [wrapper] cleanup supervisor_pilot  840849 4118155
[2025-10-13 19:48:25] 2025-10-13 23:48:25,750 [wrapper] Test setup, not cleaning
[2025-10-13 19:48:25] 2025-10-13 23:48:25,756 [wrapper] apfmon messages muted
[2025-10-13 19:48:25] 2025-10-13 23:48:25,758 [wrapper] ==== wrapper stdout END ====
[2025-10-13 19:48:25] 2025-10-13 23:48:25,760 [wrapper] ==== wrapper stderr END ====
[2025-10-13 19:48:25]  *** Error codes and diagnostics ***
[2025-10-13 19:48:25]     "exeErrorCode": 0,
[2025-10-13 19:48:25]     "exeErrorDiag": "",
[2025-10-13 19:48:25]     "pilotErrorCode": 0,
[2025-10-13 19:48:25]     "pilotErrorDiag": "",
[2025-10-13 19:48:25]  *** Listing of results directory ***
[2025-10-13 19:48:25] total 410348
[2025-10-13 19:48:25] -rw-r--r--. 1 boincer umatlas    557409 Oct  8 18:57 pilot3.tar.gz
[2025-10-13 19:48:25] -rw-r--r--. 1 boincer umatlas      5112 Oct  8 19:01 queuedata.json
[2025-10-13 19:48:25] -rwx------. 1 boincer umatlas     36292 Oct  8 19:01 runpilot2-wrapper.sh
[2025-10-13 19:48:25] -rw-r--r--. 1 boincer umatlas       100 Oct 13 18:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 19:48:25] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 18:22 run_atlas
[2025-10-13 19:48:25] -rw-r--r--. 1 boincer umatlas       105 Oct 13 18:22 job.xml
[2025-10-13 19:48:25] -rw-r--r--. 2 boincer umatlas 219426589 Oct 13 18:22 EVNT.46676267._000360.pool.root.1
[2025-10-13 19:48:25] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 18:22 start_atlas.sh
[2025-10-13 19:48:25] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 18:22 shared
[2025-10-13 19:48:25] -rw-r--r--. 2 boincer umatlas    569678 Oct 13 18:22 input.tar.gz
[2025-10-13 19:48:25] -rw-r--r--. 1 boincer umatlas         0 Oct 13 18:22 boinc_lockfile
[2025-10-13 19:48:25] -rw-r--r--. 1 boincer umatlas      2548 Oct 13 18:22 pandaJob.out
[2025-10-13 19:48:25] -rw-------. 1 boincer umatlas    972799 Oct 13 18:23 agis_schedconf.cvmfs.json
[2025-10-13 19:48:25] -rw-------. 1 boincer umatlas   1560580 Oct 13 18:23 agis_ddmendpoints.agis.ALL.json
[2025-10-13 19:48:25] drwx------. 5 boincer umatlas      4096 Oct 13 18:23 pilot3
[2025-10-13 19:48:25] -rw-r--r--. 1 boincer umatlas      7161 Oct 13 19:46 init_data.xml
[2025-10-13 19:48:25] -rw-------. 1 boincer umatlas 194719072 Oct 13 19:47 HITS.46676269._008988.pool.root.1
[2025-10-13 19:48:25] -rw-r--r--. 1 boincer umatlas       529 Oct 13 19:47 boinc_task_state.xml
[2025-10-13 19:48:25] -rw-------. 1 boincer umatlas      1036 Oct 13 19:47 memory_monitor_summary.json
[2025-10-13 19:48:25] -rw-------. 1 boincer umatlas    355466 Oct 13 19:47 log.46676269._008988.job.log.tgz.1
[2025-10-13 19:48:25] -rw-------. 1 boincer umatlas        95 Oct 13 19:47 pilot_heartbeat.json
[2025-10-13 19:48:25] -rw-------. 1 boincer umatlas      7780 Oct 13 19:47 heartbeat.json
[2025-10-13 19:48:25] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 19:48 boinc_mmap_file
[2025-10-13 19:48:25] -rw-r--r--. 1 boincer umatlas        27 Oct 13 19:48 wrapper_checkpoint.txt
[2025-10-13 19:48:25] -rw-------. 1 boincer umatlas      4896 Oct 13 19:48 pilotlog.txt
[2025-10-13 19:48:25] -rw-------. 1 boincer umatlas    723118 Oct 13 19:48 log.46676269._008988.job.log.1
[2025-10-13 19:48:25] -rw-------. 1 boincer umatlas       357 Oct 13 19:48 output.list
[2025-10-13 19:48:25] -rw-r--r--. 1 boincer umatlas       620 Oct 13 19:48 runtime_log
[2025-10-13 19:48:25] -rw-------. 1 boincer umatlas   1095680 Oct 13 19:48 result.tar.gz
[2025-10-13 19:48:25] -rw-------. 1 boincer umatlas       651 Oct 13 19:48 zbrLDmcLsQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmp0MMDmrmuLVo.diag
[2025-10-13 19:48:25] -rw-r--r--. 1 boincer umatlas      8698 Oct 13 19:48 runtime_log.err
[2025-10-13 19:48:25] -rw-r--r--. 1 boincer umatlas     22380 Oct 13 19:48 stderr.txt
[2025-10-13 19:48:25] HITS file was successfully produced:
[2025-10-13 19:48:25] -rw-------. 1 boincer umatlas 194719072 Oct 13 19:47 shared/HITS.pool.root.1
[2025-10-13 19:48:25]  *** Contents of shared directory: ***
[2025-10-13 19:48:25] total 406092
[2025-10-13 19:48:25] -rw-r--r--. 2 boincer umatlas 219426589 Oct 13 18:22 ATLAS.root_0
[2025-10-13 19:48:25] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 18:22 start_atlas.sh
[2025-10-13 19:48:25] -rw-r--r--. 2 boincer umatlas    569678 Oct 13 18:22 input.tar.gz
[2025-10-13 19:48:25] -rw-------. 1 boincer umatlas 194719072 Oct 13 19:47 HITS.pool.root.1
[2025-10-13 19:48:25] -rw-------. 1 boincer umatlas   1095680 Oct 13 19:48 result.tar.gz
19:48:27 (4111184): run_atlas exited; CPU time 23921.075155
19:48:27 (4111184): called boinc_finish(0)

</stderr_txt>
]]>

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