Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:29:50 (3055707): wrapper (7.7.26015): starting
17:29:50 (3055707): wrapper: running run_atlas (--nthreads 11)
[2025-10-13 17:29:50] Arguments: --nthreads 11
[2025-10-13 17:29:50] Threads: 11
[2025-10-13 17:29:50] Checking for CVMFS
[2025-10-13 17:29:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 17:29:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 17:29:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 17:29:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 17:29:51] 2.13.2.0 831533 131225 283636 151674 3 617 30866242 32935937 30278 16776704 0 282054594 99.651 253805098 20391 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 17:29:51] CVMFS is ok
[2025-10-13 17:29:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 17:29:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 17:29:51] Further information can be found at the LHC@home message board.
[2025-10-13 17:29:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 17:29:51] Checking for apptainer binary...
[2025-10-13 17:29:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 17:29:51] Running /usr/bin/apptainer --version
[2025-10-13 17:29:51] apptainer version 1.4.3-1.el9
[2025-10-13 17:29:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 17:29:51] c6-2-11-2.aglt2.org
[2025-10-13 17:29:51] apptainer works
[2025-10-13 17:29:51] Set ATHENA_PROC_NUMBER=11
[2025-10-13 17:29:51] Set ATHENA_CORE_NUMBER=11
[2025-10-13 17:29:51] Starting ATLAS job with PandaID=6839162304
[2025-10-13 17:29:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 19:08:23]  *** The last 200 lines of the pilot log: ***
[2025-10-13 19:08:23]  status=None
[2025-10-13 19:08:23]  status_code=0
[2025-10-13 19:08:23]  storage_token=
[2025-10-13 19:08:23]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839162304/log.46676269._066911.job.log.tgz.1
[2025-10-13 19:08:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/a3/log.46676269._066911.job.log.tgz.1
[2025-10-13 19:08:23]  workdir=None
[2025-10-13 19:08:23] ]
[2025-10-13 19:08:23] 2025-10-13 23:07:26,118 | INFO     | transferring file log.46676269._066911.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839162304/log.46676269._066911.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 19:08:23] 2025-10-13 23:07:26,118 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839162304/log.46676269._066911.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._066911.job
[2025-10-13 19:08:23] 2025-10-13 23:07:26,146 | INFO     | adding to output.list: log.46676269._066911.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/a3/log.46676269._066911.job.log.tg
[2025-10-13 19:08:23] 2025-10-13 23:07:26,147 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 19:08:23] 2025-10-13 23:07:26,148 | INFO     | summary of transferred files:
[2025-10-13 19:08:23] 2025-10-13 23:07:26,150 | INFO     |  -- lfn=log.46676269._066911.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 19:08:23] 2025-10-13 23:07:26,150 | INFO     | stage-out finished correctly
[2025-10-13 19:08:23] 2025-10-13 23:07:26,271 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 19:08:23] 2025-10-13 23:07:26,650 | WARNING  | process 3068452 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 19:08:23] 2025-10-13 23:07:26,651 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839162304/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 19:08:23] 2025-10-13 23:07:27,523 | INFO     | number of running child processes to parent process 3068452: 1
[2025-10-13 19:08:23] 2025-10-13 23:07:27,524 | INFO     | maximum number of monitored processes: 6
[2025-10-13 19:08:23] 2025-10-13 23:07:27,630 | INFO     | job 6839162304 has state=finished
[2025-10-13 19:08:23] 2025-10-13 23:07:27,631 | INFO     | preparing for final server update for job 6839162304 in state='finished'
[2025-10-13 19:08:23] 2025-10-13 23:07:27,632 | INFO     | this job has now completed (state=finished)
[2025-10-13 19:08:23] 2025-10-13 23:07:27,632 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 19:08:23] 2025-10-13 23:07:27,632 | INFO     | log transfer has been attempted: DONE
[2025-10-13 19:08:23] 2025-10-13 23:07:27,633 | INFO     | job 6839162304 has finished - writing final server update
[2025-10-13 19:08:23] 2025-10-13 23:07:27,633 | INFO     | total number of processed events: 400 (read)
[2025-10-13 19:08:23] 2025-10-13 23:07:27,634 | INFO     | executing command: lscpu
[2025-10-13 19:08:23] 2025-10-13 23:07:27,702 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 19:08:23] 2025-10-13 23:07:27,855 | INFO     | PID=3060627 has CPU usage=18.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 19:08:23] 2025-10-13 23:07:27,855 | INFO     | .. there are 37 such processes running
[2025-10-13 19:08:23] 2025-10-13 23:07:28,856 | INFO     | time since job start (5842s) is within the limit (172800.0s)
[2025-10-13 19:08:23] 2025-10-13 23:07:30,027 | INFO     | monitor loop #381: job 0:6839162304 is in state 'finished'
[2025-10-13 19:08:23] 2025-10-13 23:07:30,027 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 19:08:23] 2025-10-13 23:07:30,861 | INFO     | time since job start (5844s) is within the limit (172800.0s)
[2025-10-13 19:08:23] 2025-10-13 23:07:32,318 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 19:08:23] 2025-10-13 23:07:32,332 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2736.6158124999997
[2025-10-13 19:08:23] 2025-10-13 23:07:32,351 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839162304/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 19:08:23] 2025-10-13 23:07:32,352 | INFO     | extracted standard info from prmon json
[2025-10-13 19:08:23] 2025-10-13 23:07:32,352 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 19:08:23] 2025-10-13 23:07:32,352 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 19:08:23] 2025-10-13 23:07:32,352 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 19:08:23] 2025-10-13 23:07:32,353 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 19:08:23] 2025-10-13 23:07:32,355 | INFO     | fitting pss+swap vs Time
[2025-10-13 19:08:23] 2025-10-13 23:07:32,356 | INFO     | sum of square deviations: 218538974.08988798
[2025-10-13 19:08:23] 2025-10-13 23:07:32,356 | INFO     | sum of deviations: -15819645015.101126
[2025-10-13 19:08:23] 2025-10-13 23:07:32,356 | INFO     | mean x: 1760394029.1011236
[2025-10-13 19:08:23] 2025-10-13 23:07:32,356 | INFO     | mean y: 2451075.011235955
[2025-10-13 19:08:23] 2025-10-13 23:07:32,357 | INFO     | -- intersect: 127434222652.87537
[2025-10-13 19:08:23] 2025-10-13 23:07:32,357 | INFO     | intersect: 127434222652.87537
[2025-10-13 19:08:23] 2025-10-13 23:07:32,357 | INFO     | chi2: 0.30476596633020264
[2025-10-13 19:08:23] 2025-10-13 23:07:32,357 | INFO     | -- intersect: 127434222652.87537
[2025-10-13 19:08:23] 2025-10-13 23:07:32,357 | INFO     | current memory leak: -72.39 B/s (using 89 data points, chi2=0.30)
[2025-10-13 19:08:23] 2025-10-13 23:07:32,358 | INFO     | could have reported an average CPU frequency of 2646 MHz (7 samples)
[2025-10-13 19:08:23] 2025-10-13 23:07:32,358 | INFO     | ..............................
[2025-10-13 19:08:23] 2025-10-13 23:07:32,358 | INFO     | . Timing measurements:
[2025-10-13 19:08:23] 2025-10-13 23:07:32,358 | INFO     | . get job = 0 s
[2025-10-13 19:08:23] 2025-10-13 23:07:32,358 | INFO     | . initial setup = 3 s
[2025-10-13 19:08:23] 2025-10-13 23:07:32,358 | INFO     | . payload setup = 8 s
[2025-10-13 19:08:23] 2025-10-13 23:07:32,359 | INFO     | . stage-in = 0 s
[2025-10-13 19:08:23] 2025-10-13 23:07:32,359 | INFO     | . payload execution = 5808 s
[2025-10-13 19:08:23] 2025-10-13 23:07:32,359 | INFO     | . stage-out = 1 s
[2025-10-13 19:08:23] 2025-10-13 23:07:32,359 | INFO     | . log creation = 0 s
[2025-10-13 19:08:23] 2025-10-13 23:07:32,359 | INFO     | ..............................
[2025-10-13 19:08:23] 2025-10-13 23:07:32,474 | INFO     | 
[2025-10-13 19:08:23] 2025-10-13 23:07:32,474 | INFO     | job summary report
[2025-10-13 19:08:23] 2025-10-13 23:07:32,474 | INFO     | --------------------------------------------------
[2025-10-13 19:08:23] 2025-10-13 23:07:32,474 | INFO     | PanDA job id: 6839162304
[2025-10-13 19:08:23] 2025-10-13 23:07:32,474 | INFO     | task id: 46676269
[2025-10-13 19:08:23] 2025-10-13 23:07:32,474 | INFO     | errors: (none)
[2025-10-13 19:08:23] 2025-10-13 23:07:32,474 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 19:08:23] 2025-10-13 23:07:32,475 | INFO     | pilot state: finished 
[2025-10-13 19:08:23] 2025-10-13 23:07:32,475 | INFO     | transexitcode: 0
[2025-10-13 19:08:23] 2025-10-13 23:07:32,475 | INFO     | exeerrorcode: 0
[2025-10-13 19:08:23] 2025-10-13 23:07:32,475 | INFO     | exeerrordiag: 
[2025-10-13 19:08:23] 2025-10-13 23:07:32,475 | INFO     | exitcode: 0
[2025-10-13 19:08:23] 2025-10-13 23:07:32,475 | INFO     | exitmsg: OK
[2025-10-13 19:08:23] 2025-10-13 23:07:32,475 | INFO     | cpuconsumptiontime: 45386 s
[2025-10-13 19:08:23] 2025-10-13 23:07:32,475 | INFO     | nevents: 400
[2025-10-13 19:08:23] 2025-10-13 23:07:32,475 | INFO     | neventsw: 0
[2025-10-13 19:08:23] 2025-10-13 23:07:32,476 | INFO     | pid: 3068452
[2025-10-13 19:08:23] 2025-10-13 23:07:32,476 | INFO     | pgrp: 3068452
[2025-10-13 19:08:23] 2025-10-13 23:07:32,476 | INFO     | corecount: 11
[2025-10-13 19:08:23] 2025-10-13 23:07:32,476 | INFO     | event service: False
[2025-10-13 19:08:23] 2025-10-13 23:07:32,476 | INFO     | sizes: {0: 2348686, 1: 2348885, 7: 2349147, 12: 2349175, 5821: 2375850, 5822: 2384848, 5823: 2385032, 5829: 2385226}
[2025-10-13 19:08:23] 2025-10-13 23:07:32,476 | INFO     | --------------------------------------------------
[2025-10-13 19:08:23] 2025-10-13 23:07:32,476 | INFO     | 
[2025-10-13 19:08:23] 2025-10-13 23:07:32,476 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 19:08:23] 2025-10-13 23:07:32,498 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 19:08:23] 2025-10-13 23:07:32,498 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 19:08:23] 2025-10-13 23:07:32,498 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 19:08:23] 2025-10-13 23:07:32,498 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 19:08:23] 2025-10-13 23:07:32,498 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 19:08:23] 2025-10-13 23:07:32,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 19:08:23] 2025-10-13 23:07:32,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 19:08:23] 2025-10-13 23:07:32,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 19:08:23] 2025-10-13 23:07:32,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 19:08:23] 2025-10-13 23:07:32,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 19:08:23] 2025-10-13 23:07:32,499 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 19:08:23] 2025-10-13 23:07:32,499 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 19:08:23] 2025-10-13 23:07:32,499 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 19:08:23] 2025-10-13 23:07:32,499 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 19:08:23] 2025-10-13 23:07:32,500 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 19:08:23] 2025-10-13 23:07:32,500 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 19:08:23] 2025-10-13 23:07:32,500 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 19:08:23] 2025-10-13 23:07:32,500 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 19:08:23] 2025-10-13 23:07:32,500 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 19:08:23] 2025-10-13 23:07:32,500 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 19:08:23] 2025-10-13 23:07:32,500 | INFO     | job 6839162304 has completed (purged errors)
[2025-10-13 19:08:23] 2025-10-13 23:07:32,500 | INFO     | overall cleanup function is called
[2025-10-13 19:08:23] 2025-10-13 23:07:33,509 | INFO     | --- collectZombieJob: --- 10, [3068452]
[2025-10-13 19:08:23] 2025-10-13 23:07:33,509 | INFO     | zombie collector waiting for pid 3068452
[2025-10-13 19:08:23] 2025-10-13 23:07:33,509 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 19:08:23] 2025-10-13 23:07:33,509 | INFO     | collected zombie processes
[2025-10-13 19:08:23] 2025-10-13 23:07:33,510 | INFO     | will attempt to kill all subprocesses of pid=3068452
[2025-10-13 19:08:23] 2025-10-13 23:07:33,932 | INFO     | process IDs to be killed: [3068452] (in reverse order)
[2025-10-13 19:08:23] 2025-10-13 23:07:34,064 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 19:08:23] 2025-10-13 23:07:34,065 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 19:08:23] 2025-10-13 23:07:34,084 | INFO     | did not find any defunct processes belonging to 3068452
[2025-10-13 19:08:23] 2025-10-13 23:07:34,103 | INFO     | did not find any defunct processes belonging to 3068452
[2025-10-13 19:08:23] 2025-10-13 23:07:34,104 | INFO     | ready for new job
[2025-10-13 19:08:23] 2025-10-13 23:07:34,104 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 19:08:23] 2025-10-13 23:07:34,106 | INFO     | ***************************************
[2025-10-13 19:08:23] 2025-10-13 23:07:34,108 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 19:08:23] 2025-10-13 23:07:34,108 | INFO     | ***************************************
[2025-10-13 19:08:23] 2025-10-13 23:07:34,108 | INFO     | 
[2025-10-13 19:08:23] 2025-10-13 23:07:34,125 | INFO     | architecture information:
[2025-10-13 19:08:23] 2025-10-13 23:07:34,126 | INFO     | executing command: cat /etc/os-release
[2025-10-13 19:08:23] 2025-10-13 23:07:34,143 | INFO     | cat /etc/os-release:
[2025-10-13 19:08:23] NAME="CentOS Linux"
[2025-10-13 19:08:23] VERSION="7 (Core)"
[2025-10-13 19:08:23] ID="centos"
[2025-10-13 19:08:23] ID_LIKE="rhel fedora"
[2025-10-13 19:08:23] VERSION_ID="7"
[2025-10-13 19:08:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 19:08:23] ANSI_COLOR="0;31"
[2025-10-13 19:08:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 19:08:23] HOME_URL="https://www.centos.org/"
[2025-10-13 19:08:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 19:08:23] 
[2025-10-13 19:08:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 19:08:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 19:08:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 19:08:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 19:08:23] 
[2025-10-13 19:08:23] 2025-10-13 23:07:34,144 | INFO     | ***************************************
[2025-10-13 19:08:23] 2025-10-13 23:07:34,646 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 19:08:23] 2025-10-13 23:07:34,669 | INFO     | sufficient remaining disk space (96649347072 B)
[2025-10-13 19:08:23] 2025-10-13 23:07:34,669 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 19:08:23] 2025-10-13 23:07:34,670 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 19:08:23] 2025-10-13 23:07:34,670 | INFO     | update_server=False
[2025-10-13 19:08:23] 2025-10-13 23:07:34,670 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 19:08:23] 2025-10-13 23:07:34,670 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 19:08:23] 2025-10-13 23:07:35,001 | INFO     | all payload control threads have been joined
[2025-10-13 19:08:23] 2025-10-13 23:07:35,015 | INFO     | all data control threads have been joined
[2025-10-13 19:08:23] 2025-10-13 23:07:35,040 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 19:08:23] 2025-10-13 23:07:35,041 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 19:08:23] 2025-10-13 23:07:35,041 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 19:08:23] 2025-10-13 23:07:35,041 | INFO     | will abort loop
[2025-10-13 19:08:23] 2025-10-13 23:07:35,675 | INFO     | [job] retrieve thread has finished
[2025-10-13 19:08:23] 2025-10-13 23:07:35,730 | INFO     | all job control threads have been joined
[2025-10-13 19:08:23] 2025-10-13 23:07:36,007 | INFO     | [payload] control thread has finished
[2025-10-13 19:08:23] 2025-10-13 23:07:36,021 | INFO     | [data] control thread has finished
[2025-10-13 19:08:23] 2025-10-13 23:07:36,047 | INFO     | [job] job monitor thread has finished
[2025-10-13 19:08:23] 2025-10-13 23:07:36,112 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 19:08:23] 2025-10-13 23:07:36,464 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 19:08:23] 2025-10-13 23:07:36,561 | INFO     | [job] validate thread has finished
[2025-10-13 19:08:23] 2025-10-13 23:07:36,657 | INFO     | [data] copytool_in thread has finished
[2025-10-13 19:08:23] 2025-10-13 23:07:36,676 | INFO     | [data] copytool_out thread has finished
[2025-10-13 19:08:23] 2025-10-13 23:07:36,735 | INFO     | [job] control thread has finished
[2025-10-13 19:08:23] 2025-10-13 23:07:36,889 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 19:08:23] 2025-10-13 23:07:37,063 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 19:08:23] 2025-10-13 23:07:37,115 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 19:08:23] 2025-10-13 23:07:37,170 | INFO     | [payload] failed_post thread has finished
[2025-10-13 19:08:23] 2025-10-13 23:07:37,238 | INFO     | [payload] validate_post thread has finished
[2025-10-13 19:08:23] 2025-10-13 23:07:37,486 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 19:08:23] 2025-10-13 23:07:38,491 | INFO     | [job] queue monitor thread has finished
[2025-10-13 19:08:23] 2025-10-13 23:07:40,895 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 19:08:23] 2025-10-13 23:08:04,487 | INFO     | PID=3060627 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 19:08:23] 2025-10-13 23:08:04,487 | INFO     | .. there are 37 such processes running
[2025-10-13 19:08:23] 2025-10-13 23:08:04,488 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 19:08:23] 2025-10-13 23:08:04,489 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 19:08:23] 2025-10-13 23:08:04,489 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 19:08:23] 2025-10-13 23:08:16,414 | INFO     | [monitor] cgroup control has ended
[2025-10-13 19:08:23] 2025-10-13 23:08:17,419 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140544840021824)>', '<ExcThread(monitor, started 140544189646592)>']
[2025-10-13 19:08:23] 2025-10-13 23:08:17,556 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 19:08:23] 2025-10-13 23:08:17,556 | INFO     | [monitor] control thread has ended
[2025-10-13 19:08:23] 2025-10-13 23:08:22,445 | INFO     | all workflow threads have been joined
[2025-10-13 19:08:23] 2025-10-13 23:08:22,446 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 19:08:23] 2025-10-13 23:08:22,446 | INFO     | traces error code: 0
[2025-10-13 19:08:23] 2025-10-13 23:08:22,447 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 19:08:23] 2025-10-13 23:08:22,740 [wrapper] ==== pilot stdout END ====
[2025-10-13 19:08:23] 2025-10-13 23:08:22,744 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 19:08:23] 2025-10-13 23:08:22,748 [wrapper] pilotpid: 3060627
[2025-10-13 19:08:23] 2025-10-13 23:08:22,751 [wrapper] Pilot exit status: 0
[2025-10-13 19:08:23] 2025-10-13 23:08:22,856 [wrapper] pandaids: 6839162304
[2025-10-13 19:08:23] 2025-10-13 23:08:22,988 [wrapper] cleanup supervisor_pilot 3484841 3060629
[2025-10-13 19:08:23] 2025-10-13 23:08:23,001 [wrapper] Test setup, not cleaning
[2025-10-13 19:08:23] 2025-10-13 23:08:23,008 [wrapper] apfmon messages muted
[2025-10-13 19:08:23] 2025-10-13 23:08:23,012 [wrapper] ==== wrapper stdout END ====
[2025-10-13 19:08:23] 2025-10-13 23:08:23,019 [wrapper] ==== wrapper stderr END ====
[2025-10-13 19:08:23]  *** Error codes and diagnostics ***
[2025-10-13 19:08:23]     "exeErrorCode": 0,
[2025-10-13 19:08:23]     "exeErrorDiag": "",
[2025-10-13 19:08:23]     "pilotErrorCode": 0,
[2025-10-13 19:08:23]     "pilotErrorDiag": "",
[2025-10-13 19:08:23]  *** Listing of results directory ***
[2025-10-13 19:08:23] total 417404
[2025-10-13 19:08:23] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 19:09 pilot3.tar.gz
[2025-10-13 19:08:23] -rwx------. 1 boincer umatlas     36292 Oct 11 19:17 runpilot2-wrapper.sh
[2025-10-13 19:08:23] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 19:17 queuedata.json
[2025-10-13 19:08:23] -rw-r--r--. 1 boincer umatlas       100 Oct 13 17:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 19:08:23] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 17:29 run_atlas
[2025-10-13 19:08:23] -rw-r--r--. 1 boincer umatlas       105 Oct 13 17:29 job.xml
[2025-10-13 19:08:23] -rw-r--r--. 2 boincer umatlas 222337696 Oct 13 17:29 EVNT.46676267._002706.pool.root.1
[2025-10-13 19:08:23] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 17:29 start_atlas.sh
[2025-10-13 19:08:23] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 17:29 shared
[2025-10-13 19:08:23] -rw-r--r--. 2 boincer umatlas    569677 Oct 13 17:29 input.tar.gz
[2025-10-13 19:08:23] -rw-r--r--. 1 boincer umatlas         0 Oct 13 17:29 boinc_lockfile
[2025-10-13 19:08:23] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 17:29 pandaJob.out
[2025-10-13 19:08:23] -rw-------. 1 boincer umatlas    972791 Oct 13 17:30 agis_schedconf.cvmfs.json
[2025-10-13 19:08:23] -rw-------. 1 boincer umatlas   1560580 Oct 13 17:30 agis_ddmendpoints.agis.ALL.json
[2025-10-13 19:08:23] drwx------. 5 boincer umatlas      4096 Oct 13 17:30 pilot3
[2025-10-13 19:08:23] -rw-r--r--. 1 boincer umatlas      6856 Oct 13 19:04 init_data.xml
[2025-10-13 19:08:23] -rw-------. 1 boincer umatlas 198804959 Oct 13 19:06 HITS.46676269._066911.pool.root.1
[2025-10-13 19:08:23] -rw-r--r--. 1 boincer umatlas       530 Oct 13 19:06 boinc_task_state.xml
[2025-10-13 19:08:23] -rw-------. 1 boincer umatlas      1042 Oct 13 19:07 memory_monitor_summary.json
[2025-10-13 19:08:23] -rw-------. 1 boincer umatlas    390599 Oct 13 19:07 log.46676269._066911.job.log.tgz.1
[2025-10-13 19:08:23] -rw-------. 1 boincer umatlas      7830 Oct 13 19:07 heartbeat.json
[2025-10-13 19:08:23] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 19:07 boinc_mmap_file
[2025-10-13 19:08:23] -rw-r--r--. 1 boincer umatlas        27 Oct 13 19:07 wrapper_checkpoint.txt
[2025-10-13 19:08:23] -rw-------. 1 boincer umatlas        95 Oct 13 19:08 pilot_heartbeat.json
[2025-10-13 19:08:23] -rw-------. 1 boincer umatlas      5010 Oct 13 19:08 pilotlog.txt
[2025-10-13 19:08:23] -rw-------. 1 boincer umatlas    799758 Oct 13 19:08 log.46676269._066911.job.log.1
[2025-10-13 19:08:23] -rw-------. 1 boincer umatlas       357 Oct 13 19:08 output.list
[2025-10-13 19:08:23] -rw-r--r--. 1 boincer umatlas       620 Oct 13 19:08 runtime_log
[2025-10-13 19:08:23] -rw-------. 1 boincer umatlas   1208320 Oct 13 19:08 result.tar.gz
[2025-10-13 19:08:23] -rw-r--r--. 1 boincer umatlas      8710 Oct 13 19:08 runtime_log.err
[2025-10-13 19:08:23] -rw-------. 1 boincer umatlas       654 Oct 13 19:08 Kp2NDmP1xR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmVmSMDmeQnUNm.diag
[2025-10-13 19:08:23] -rw-r--r--. 1 boincer umatlas     22131 Oct 13 19:08 stderr.txt
[2025-10-13 19:08:23] HITS file was successfully produced:
[2025-10-13 19:08:23] -rw-------. 1 boincer umatlas 198804959 Oct 13 19:06 shared/HITS.pool.root.1
[2025-10-13 19:08:23]  *** Contents of shared directory: ***
[2025-10-13 19:08:23] total 413036
[2025-10-13 19:08:23] -rw-r--r--. 2 boincer umatlas 222337696 Oct 13 17:29 ATLAS.root_0
[2025-10-13 19:08:23] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 17:29 start_atlas.sh
[2025-10-13 19:08:23] -rw-r--r--. 2 boincer umatlas    569677 Oct 13 17:29 input.tar.gz
[2025-10-13 19:08:23] -rw-------. 1 boincer umatlas 198804959 Oct 13 19:06 HITS.pool.root.1
[2025-10-13 19:08:23] -rw-------. 1 boincer umatlas   1208320 Oct 13 19:08 result.tar.gz
19:08:24 (3055707): run_atlas exited; CPU time 45652.427537
19:08:24 (3055707): called boinc_finish(0)

</stderr_txt>
]]>

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