Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:00:47 (2935043): wrapper (7.7.26015): starting
17:00:47 (2935043): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 17:00:47] Arguments: --nthreads 8
[2025-10-13 17:00:47] Threads: 8
[2025-10-13 17:00:47] Checking for CVMFS
[2025-10-13 17:00:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 17:00:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 17:00:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 17:00:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 17:00:48] 2.13.2.0 4308 17644 161940 151672 0 65 25353049 39288832 8841 16776704 0 16197216 99.736 9270527 30262 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 17:00:48] CVMFS is ok
[2025-10-13 17:00:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 17:00:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 17:00:48] Further information can be found at the LHC@home message board.
[2025-10-13 17:00:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 17:00:48] Checking for apptainer binary...
[2025-10-13 17:00:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 17:00:48] Running /usr/bin/apptainer --version
[2025-10-13 17:00:48] apptainer version 1.4.3-1.el9
[2025-10-13 17:00:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 17:00:48] c-211-32.aglt2.org
[2025-10-13 17:00:48] apptainer works
[2025-10-13 17:00:48] Set ATHENA_PROC_NUMBER=8
[2025-10-13 17:00:48] Set ATHENA_CORE_NUMBER=8
[2025-10-13 17:00:48] Starting ATLAS job with PandaID=6831805240
[2025-10-13 17:00:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:46:38 (3002454): wrapper (7.7.26015): starting
17:46:38 (3002454): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 17:46:38] Arguments: --nthreads 8
[2025-10-13 17:46:38] Threads: 8
[2025-10-13 17:46:38] This job has been restarted, cleaning up previous attempt
[2025-10-13 17:46:38] Checking for CVMFS
[2025-10-13 17:46:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 17:46:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 17:46:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 17:46:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 17:46:39] 2.13.2.0 4308 17690 159788 151674 2 65 25396157 39288833 7925 16776704 0 16262280 99.737 9273314 30261 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 17:46:39] CVMFS is ok
[2025-10-13 17:46:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 17:46:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 17:46:39] Further information can be found at the LHC@home message board.
[2025-10-13 17:46:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 17:46:39] Checking for apptainer binary...
[2025-10-13 17:46:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 17:46:39] Running /usr/bin/apptainer --version
[2025-10-13 17:46:39] apptainer version 1.4.3-1.el9
[2025-10-13 17:46:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 17:46:39] c-211-32.aglt2.org
[2025-10-13 17:46:39] apptainer works
[2025-10-13 17:46:39] Set ATHENA_PROC_NUMBER=8
[2025-10-13 17:46:39] Set ATHENA_CORE_NUMBER=8
[2025-10-13 17:46:39] Starting ATLAS job with PandaID=6831805240
[2025-10-13 17:46:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 00:02:01]  *** The last 200 lines of the pilot log: ***
[2025-10-14 00:02:01] 2025-10-14 04:01:26,409 | INFO     | fitting pss+swap vs Time
[2025-10-14 00:02:01] 2025-10-14 04:01:26,410 | INFO     | sum of square deviations: 15453946609.475513
[2025-10-14 00:02:01] 2025-10-14 04:01:26,418 | INFO     | sum of deviations: 4054625426.046196
[2025-10-14 00:02:01] 2025-10-14 04:01:26,419 | INFO     | mean x: 1760403255.3668478
[2025-10-14 00:02:01] 2025-10-14 04:01:26,419 | INFO     | mean y: 2528392.8070652173
[2025-10-14 00:02:01] 2025-10-14 04:01:26,419 | INFO     | -- intersect: -459345585.3862089
[2025-10-14 00:02:01] 2025-10-14 04:01:26,419 | INFO     | intersect: -459345585.3862089
[2025-10-14 00:02:01] 2025-10-14 04:01:26,420 | INFO     | chi2: 2.2720372726821805
[2025-10-14 00:02:01] 2025-10-14 04:01:26,425 | INFO     | sum of square deviations: 14832629338.170698
[2025-10-14 00:02:01] 2025-10-14 04:01:26,438 | INFO     | sum of deviations: 27138359415.016552
[2025-10-14 00:02:01] 2025-10-14 04:01:26,438 | INFO     | mean x: 1760403102.8732781
[2025-10-14 00:02:01] 2025-10-14 04:01:26,438 | INFO     | mean y: 2533995.826446281
[2025-10-14 00:02:01] 2025-10-14 04:01:26,438 | INFO     | -- intersect: -3218368450.5214367
[2025-10-14 00:02:01] 2025-10-14 04:01:26,439 | INFO     | intersect: -3218368450.5214367
[2025-10-14 00:02:01] 2025-10-14 04:01:26,439 | INFO     | chi2: 1.593412039961093
[2025-10-14 00:02:01] 2025-10-14 04:01:26,439 | INFO     | current chi2=1.593412039961093 (change=29.868578340704698 %)
[2025-10-14 00:02:01] 2025-10-14 04:01:26,440 | INFO     | sum of square deviations: 14228107655.3296
[2025-10-14 00:02:01] 2025-10-14 04:01:26,449 | INFO     | sum of deviations: 26629300670.642445
[2025-10-14 00:02:01] 2025-10-14 04:01:26,449 | INFO     | mean x: 1760402950.368715
[2025-10-14 00:02:01] 2025-10-14 04:01:26,449 | INFO     | mean y: 2533867.3966480447
[2025-10-14 00:02:01] 2025-10-14 04:01:26,454 | INFO     | -- intersect: -3292233124.986543
[2025-10-14 00:02:01] 2025-10-14 04:01:26,454 | INFO     | intersect: -3292233124.986543
[2025-10-14 00:02:01] 2025-10-14 04:01:26,455 | INFO     | chi2: 1.5936946717754374
[2025-10-14 00:02:01] 2025-10-14 04:01:26,455 | INFO     | current chi2=1.5936946717754374 (change=-0.01773752220118878 %)
[2025-10-14 00:02:01] 2025-10-14 04:01:26,455 | INFO     | right removable region: 357
[2025-10-14 00:02:01] 2025-10-14 04:01:26,456 | INFO     | sum of square deviations: 14832479520.666653
[2025-10-14 00:02:01] 2025-10-14 04:01:26,465 | INFO     | sum of deviations: -48159712647.999985
[2025-10-14 00:02:01] 2025-10-14 04:01:26,466 | INFO     | mean x: 1760403407.878788
[2025-10-14 00:02:01] 2025-10-14 04:01:26,466 | INFO     | mean y: 2541115.0
[2025-10-14 00:02:01] 2025-10-14 04:01:26,466 | INFO     | -- intersect: 5718410949.836074
[2025-10-14 00:02:01] 2025-10-14 04:01:26,466 | INFO     | intersect: 5718410949.836074
[2025-10-14 00:02:01] 2025-10-14 04:01:26,472 | INFO     | chi2: 0.8877194339972214
[2025-10-14 00:02:01] 2025-10-14 04:01:26,473 | INFO     | current chi2=0.8877194339972214 (change=60.92848279072231 %)
[2025-10-14 00:02:01] 2025-10-14 04:01:26,473 | INFO     | sum of square deviations: 14228006574.092205
[2025-10-14 00:02:01] 2025-10-14 04:01:26,486 | INFO     | sum of deviations: -36740222704.65643
[2025-10-14 00:02:01] 2025-10-14 04:01:26,486 | INFO     | mean x: 1760403560.377095
[2025-10-14 00:02:01] 2025-10-14 04:01:26,486 | INFO     | mean y: 2538221.0418994413
[2025-10-14 00:02:01] 2025-10-14 04:01:26,497 | INFO     | -- intersect: 4548334466.040558
[2025-10-14 00:02:01] 2025-10-14 04:01:26,497 | INFO     | intersect: 4548334466.040558
[2025-10-14 00:02:01] 2025-10-14 04:01:26,498 | INFO     | chi2: 0.850647167458737
[2025-10-14 00:02:01] 2025-10-14 04:01:26,498 | INFO     | current chi2=0.850647167458737 (change=4.176124248125949 %)
[2025-10-14 00:02:01] 2025-10-14 04:01:26,498 | INFO     | left removable region: 20
[2025-10-14 00:02:01] 2025-10-14 04:01:26,499 | INFO     | sum of square deviations: 11868290278.765574
[2025-10-14 00:02:01] 2025-10-14 04:01:26,517 | INFO     | sum of deviations: 14984886862.845716
[2025-10-14 00:02:01] 2025-10-14 04:01:26,517 | INFO     | mean x: 1760403529.875371
[2025-10-14 00:02:01] 2025-10-14 04:01:26,517 | INFO     | mean y: 2536154.234421365
[2025-10-14 00:02:01] 2025-10-14 04:01:26,517 | INFO     | -- intersect: -2220146903.605348
[2025-10-14 00:02:01] 2025-10-14 04:01:26,518 | INFO     | intersect: -2220146903.605348
[2025-10-14 00:02:01] 2025-10-14 04:01:26,518 | INFO     | chi2: 0.004574577394733579
[2025-10-14 00:02:01] 2025-10-14 04:01:26,518 | INFO     | -- intersect: -2220146903.605348
[2025-10-14 00:02:01] 2025-10-14 04:01:26,527 | INFO     | current memory leak: 1.26 B/s (using 337 data points, chi2=0.00)
[2025-10-14 00:02:01] 2025-10-14 04:01:26,528 | INFO     | could have reported an average CPU frequency of 2899 MHz (16 samples)
[2025-10-14 00:02:01] 2025-10-14 04:01:26,528 | INFO     | ..............................
[2025-10-14 00:02:01] 2025-10-14 04:01:26,528 | INFO     | . Timing measurements:
[2025-10-14 00:02:01] 2025-10-14 04:01:26,528 | INFO     | . get job = 0 s
[2025-10-14 00:02:01] 2025-10-14 04:01:26,529 | INFO     | . initial setup = 1 s
[2025-10-14 00:02:01] 2025-10-14 04:01:26,529 | INFO     | . payload setup = 14 s
[2025-10-14 00:02:01] 2025-10-14 04:01:26,529 | INFO     | . stage-in = 0 s
[2025-10-14 00:02:01] 2025-10-14 04:01:26,529 | INFO     | . payload execution = 22411 s
[2025-10-14 00:02:01] 2025-10-14 04:01:26,529 | INFO     | . stage-out = 3 s
[2025-10-14 00:02:01] 2025-10-14 04:01:26,529 | INFO     | . log creation = 0 s
[2025-10-14 00:02:01] 2025-10-14 04:01:26,529 | INFO     | ..............................
[2025-10-14 00:02:01] 2025-10-14 04:01:26,706 | INFO     | time since job start (22469s) is within the limit (172800.0s)
[2025-10-14 00:02:01] 2025-10-14 04:01:26,860 | INFO     | 
[2025-10-14 00:02:01] 2025-10-14 04:01:26,860 | INFO     | job summary report
[2025-10-14 00:02:01] 2025-10-14 04:01:26,860 | INFO     | --------------------------------------------------
[2025-10-14 00:02:01] 2025-10-14 04:01:26,860 | INFO     | PanDA job id: 6831805240
[2025-10-14 00:02:01] 2025-10-14 04:01:26,861 | INFO     | task id: 46376905
[2025-10-14 00:02:01] 2025-10-14 04:01:26,861 | INFO     | errors: (none)
[2025-10-14 00:02:01] 2025-10-14 04:01:26,861 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 00:02:01] 2025-10-14 04:01:26,861 | INFO     | pilot state: finished 
[2025-10-14 00:02:01] 2025-10-14 04:01:26,861 | INFO     | transexitcode: 0
[2025-10-14 00:02:01] 2025-10-14 04:01:26,861 | INFO     | exeerrorcode: 0
[2025-10-14 00:02:01] 2025-10-14 04:01:26,861 | INFO     | exeerrordiag: 
[2025-10-14 00:02:01] 2025-10-14 04:01:26,862 | INFO     | exitcode: 0
[2025-10-14 00:02:01] 2025-10-14 04:01:26,862 | INFO     | exitmsg: OK
[2025-10-14 00:02:01] 2025-10-14 04:01:26,862 | INFO     | cpuconsumptiontime: 76163 s
[2025-10-14 00:02:01] 2025-10-14 04:01:26,862 | INFO     | nevents: 400
[2025-10-14 00:02:01] 2025-10-14 04:01:26,862 | INFO     | neventsw: 0
[2025-10-14 00:02:01] 2025-10-14 04:01:26,862 | INFO     | pid: 3012880
[2025-10-14 00:02:01] 2025-10-14 04:01:26,862 | INFO     | pgrp: 3012880
[2025-10-14 00:02:01] 2025-10-14 04:01:26,863 | INFO     | corecount: 8
[2025-10-14 00:02:01] 2025-10-14 04:01:26,863 | INFO     | event service: False
[2025-10-14 00:02:01] 2025-10-14 04:01:26,863 | INFO     | sizes: {0: 2348589, 1: 2348844, 2: 2348844, 11: 2349134, 12: 2349162, 22430: 2383762, 22431: 2383889, 22435: 2392943, 22439: 2392999, 22450: 2393193}
[2025-10-14 00:02:01] 2025-10-14 04:01:26,863 | INFO     | --------------------------------------------------
[2025-10-14 00:02:01] 2025-10-14 04:01:26,863 | INFO     | 
[2025-10-14 00:02:01] 2025-10-14 04:01:26,863 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-14 00:02:01] 2025-10-14 04:01:26,887 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 00:02:01] 2025-10-14 04:01:26,887 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 00:02:01] 2025-10-14 04:01:26,887 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 00:02:01] 2025-10-14 04:01:26,888 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 00:02:01] 2025-10-14 04:01:26,888 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 00:02:01] 2025-10-14 04:01:26,888 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 00:02:01] 2025-10-14 04:01:26,889 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 00:02:01] 2025-10-14 04:01:26,889 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 00:02:01] 2025-10-14 04:01:26,889 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 00:02:01] 2025-10-14 04:01:26,890 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 00:02:01] 2025-10-14 04:01:26,890 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 00:02:01] 2025-10-14 04:01:26,890 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 00:02:01] 2025-10-14 04:01:26,890 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 00:02:01] 2025-10-14 04:01:26,890 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 00:02:01] 2025-10-14 04:01:26,890 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 00:02:01] 2025-10-14 04:01:26,891 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 00:02:01] 2025-10-14 04:01:26,891 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 00:02:01] 2025-10-14 04:01:26,891 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 00:02:01] 2025-10-14 04:01:26,891 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 00:02:01] 2025-10-14 04:01:26,891 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 00:02:01] 2025-10-14 04:01:26,892 | INFO     | job 6831805240 has completed (purged errors)
[2025-10-14 00:02:01] 2025-10-14 04:01:26,892 | INFO     | overall cleanup function is called
[2025-10-14 00:02:01] 2025-10-14 04:01:27,902 | INFO     | --- collectZombieJob: --- 10, [3012880]
[2025-10-14 00:02:01] 2025-10-14 04:01:27,902 | INFO     | zombie collector waiting for pid 3012880
[2025-10-14 00:02:01] 2025-10-14 04:01:27,902 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 00:02:01] 2025-10-14 04:01:27,902 | INFO     | collected zombie processes
[2025-10-14 00:02:01] 2025-10-14 04:01:27,902 | INFO     | will attempt to kill all subprocesses of pid=3012880
[2025-10-14 00:02:01] 2025-10-14 04:01:28,291 | INFO     | process IDs to be killed: [3012880] (in reverse order)
[2025-10-14 00:02:01] 2025-10-14 04:01:28,619 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 00:02:01] 2025-10-14 04:01:28,620 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 00:02:01] 2025-10-14 04:01:28,695 | INFO     | did not find any defunct processes belonging to 3012880
[2025-10-14 00:02:01] 2025-10-14 04:01:28,726 | INFO     | did not find any defunct processes belonging to 3012880
[2025-10-14 00:02:01] 2025-10-14 04:01:28,726 | INFO     | ready for new job
[2025-10-14 00:02:01] 2025-10-14 04:01:28,726 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 00:02:01] 2025-10-14 04:01:28,737 | INFO     | ***************************************
[2025-10-14 00:02:01] 2025-10-14 04:01:28,737 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-14 00:02:01] 2025-10-14 04:01:28,738 | INFO     | ***************************************
[2025-10-14 00:02:01] 2025-10-14 04:01:28,738 | INFO     | 
[2025-10-14 00:02:01] 2025-10-14 04:01:28,740 | INFO     | architecture information:
[2025-10-14 00:02:01] 2025-10-14 04:01:28,753 | INFO     | executing command: cat /etc/os-release
[2025-10-14 00:02:01] 2025-10-14 04:01:28,880 | INFO     | cat /etc/os-release:
[2025-10-14 00:02:01] NAME="CentOS Linux"
[2025-10-14 00:02:01] VERSION="7 (Core)"
[2025-10-14 00:02:01] ID="centos"
[2025-10-14 00:02:01] ID_LIKE="rhel fedora"
[2025-10-14 00:02:01] VERSION_ID="7"
[2025-10-14 00:02:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 00:02:01] ANSI_COLOR="0;31"
[2025-10-14 00:02:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 00:02:01] HOME_URL="https://www.centos.org/"
[2025-10-14 00:02:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 00:02:01] 
[2025-10-14 00:02:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 00:02:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 00:02:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 00:02:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 00:02:01] 
[2025-10-14 00:02:01] 2025-10-14 04:01:28,881 | INFO     | ***************************************
[2025-10-14 00:02:01] 2025-10-14 04:01:29,384 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-14 00:02:01] 2025-10-14 04:01:29,509 | INFO     | sufficient remaining disk space (53863251968 B)
[2025-10-14 00:02:01] 2025-10-14 04:01:29,510 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 00:02:01] 2025-10-14 04:01:29,510 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 00:02:01] 2025-10-14 04:01:29,511 | INFO     | update_server=False
[2025-10-14 00:02:01] 2025-10-14 04:01:29,511 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 00:02:01] 2025-10-14 04:01:29,661 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-14 00:02:01] 2025-10-14 04:01:29,661 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-14 00:02:01] 2025-10-14 04:01:29,662 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 00:02:01] 2025-10-14 04:01:29,662 | INFO     | will abort loop
[2025-10-14 00:02:01] 2025-10-14 04:01:29,761 | INFO     | all payload control threads have been joined
[2025-10-14 00:02:01] 2025-10-14 04:01:29,861 | INFO     | all job control threads have been joined
[2025-10-14 00:02:01] 2025-10-14 04:01:30,023 | INFO     | all data control threads have been joined
[2025-10-14 00:02:01] 2025-10-14 04:01:30,525 | INFO     | [job] retrieve thread has finished
[2025-10-14 00:02:01] 2025-10-14 04:01:30,668 | INFO     | [job] job monitor thread has finished
[2025-10-14 00:02:01] 2025-10-14 04:01:30,731 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 00:02:01] 2025-10-14 04:01:30,767 | INFO     | [payload] control thread has finished
[2025-10-14 00:02:01] 2025-10-14 04:01:30,774 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 00:02:01] 2025-10-14 04:01:30,867 | INFO     | [job] control thread has finished
[2025-10-14 00:02:01] 2025-10-14 04:01:30,989 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 00:02:01] 2025-10-14 04:01:31,029 | INFO     | [data] control thread has finished
[2025-10-14 00:02:01] 2025-10-14 04:01:31,071 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 00:02:01] 2025-10-14 04:01:31,197 | INFO     | [data] copytool_in thread has finished
[2025-10-14 00:02:01] 2025-10-14 04:01:31,409 | INFO     | [job] validate thread has finished
[2025-10-14 00:02:01] 2025-10-14 04:01:31,409 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 00:02:01] 2025-10-14 04:01:31,875 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 00:02:01] 2025-10-14 04:01:31,908 | INFO     | [payload] failed_post thread has finished
[2025-10-14 00:02:01] 2025-10-14 04:01:31,923 | INFO     | [payload] validate_post thread has finished
[2025-10-14 00:02:01] 2025-10-14 04:01:32,018 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 00:02:01] 2025-10-14 04:01:32,738 | INFO     | [data] copytool_out thread has finished
[2025-10-14 00:02:01] 2025-10-14 04:01:32,882 | INFO     | [job] queue monitor thread has finished
[2025-10-14 00:02:01] 2025-10-14 04:01:35,083 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 00:02:01] 2025-10-14 04:01:36,647 | INFO     | [monitor] cgroup control has ended
[2025-10-14 00:02:01] 2025-10-14 04:01:38,484 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139739768194880)>', '<ExcThread(monitor, started 139738975565568)>']
[2025-10-14 00:02:01] 2025-10-14 04:01:43,510 | INFO     | all workflow threads have been joined
[2025-10-14 00:02:01] 2025-10-14 04:01:43,510 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 00:02:01] 2025-10-14 04:01:43,510 | INFO     | traces error code: 0
[2025-10-14 00:02:01] 2025-10-14 04:01:43,511 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 00:02:01] 2025-10-14 04:02:00,321 | INFO     | PID=3006148 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 00:02:01] 2025-10-14 04:02:00,322 | INFO     | .. there are 6 such processes running
[2025-10-14 00:02:01] 2025-10-14 04:02:00,323 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 00:02:01] 2025-10-14 04:02:00,323 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 00:02:01] 2025-10-14 04:02:00,324 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 00:02:01] 2025-10-14 04:02:00,324 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 00:02:01] 2025-10-14 04:02:00,324 | INFO     | [monitor] control thread has ended
[2025-10-14 00:02:01] 2025-10-14 04:02:00,488 [wrapper] ==== pilot stdout END ====
[2025-10-14 00:02:01] 2025-10-14 04:02:00,519 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 00:02:01] 2025-10-14 04:02:00,568 [wrapper] pilotpid: 3006148
[2025-10-14 00:02:01] 2025-10-14 04:02:00,614 [wrapper] Pilot exit status: 0
[2025-10-14 00:02:01] 2025-10-14 04:02:00,702 [wrapper] pandaids: 6831805240 6831805240
[2025-10-14 00:02:01] 2025-10-14 04:02:00,756 [wrapper] cleanup supervisor_pilot 3438024 3006149
[2025-10-14 00:02:01] 2025-10-14 04:02:00,760 [wrapper] Test setup, not cleaning
[2025-10-14 00:02:01] 2025-10-14 04:02:00,781 [wrapper] apfmon messages muted
[2025-10-14 00:02:01] 2025-10-14 04:02:00,813 [wrapper] ==== wrapper stdout END ====
[2025-10-14 00:02:01] 2025-10-14 04:02:00,847 [wrapper] ==== wrapper stderr END ====
[2025-10-14 00:02:01]  *** Error codes and diagnostics ***
[2025-10-14 00:02:01]     "exeErrorCode": 0,
[2025-10-14 00:02:01]     "exeErrorDiag": "",
[2025-10-14 00:02:01]     "pilotErrorCode": 0,
[2025-10-14 00:02:01]     "pilotErrorDiag": "",
[2025-10-14 00:02:01]  *** Listing of results directory ***
[2025-10-14 00:02:01] total 608892
[2025-10-14 00:02:01] drwx------. 4 boincer umatlas      4096 Jul 31 09:00 pilot3
[2025-10-14 00:02:01] -rw-r--r--. 1 boincer umatlas    552446 Oct  5 13:22 pilot3.tar.gz
[2025-10-14 00:02:01] -rw-r--r--. 1 boincer umatlas      5112 Oct  5 13:42 queuedata.json
[2025-10-14 00:02:01] -rwx------. 1 boincer umatlas     36292 Oct  5 13:43 runpilot2-wrapper.sh
[2025-10-14 00:02:01] -rw-r--r--. 1 boincer umatlas       100 Oct 13 17:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 00:02:01] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 17:00 run_atlas
[2025-10-14 00:02:01] -rw-r--r--. 1 boincer umatlas       105 Oct 13 17:00 job.xml
[2025-10-14 00:02:01] -rw-r--r--. 3 boincer umatlas 214895433 Oct 13 17:00 EVNT.46376901._003380.pool.root.1
[2025-10-14 00:02:01] -rw-r--r--. 3 boincer umatlas 214895433 Oct 13 17:00 ATLAS.root_0
[2025-10-14 00:02:01] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 17:00 start_atlas.sh
[2025-10-14 00:02:01] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 17:00 shared
[2025-10-14 00:02:01] -rw-r--r--. 2 boincer umatlas    565607 Oct 13 17:00 input.tar.gz
[2025-10-14 00:02:01] -rw-r--r--. 1 boincer umatlas         0 Oct 13 17:00 boinc_lockfile
[2025-10-14 00:02:01] -rw-r--r--. 1 boincer umatlas      2519 Oct 13 17:46 pandaJob.out
[2025-10-14 00:02:01] -rw-------. 1 boincer umatlas    972791 Oct 13 17:46 agis_schedconf.cvmfs.json
[2025-10-14 00:02:01] -rw-------. 1 boincer umatlas 182928931 Oct 14 00:00 HITS.46376905._091741.pool.root.1
[2025-10-14 00:02:01] -rw-r--r--. 1 boincer umatlas       531 Oct 14 00:00 boinc_task_state.xml
[2025-10-14 00:02:01] -rw-------. 1 boincer umatlas      1041 Oct 14 00:01 memory_monitor_summary.json
[2025-10-14 00:02:01] -rw-------. 1 boincer umatlas   1560580 Oct 14 00:01 agis_ddmendpoints.agis.ALL.json
[2025-10-14 00:02:01] -rw-------. 1 boincer umatlas    567983 Oct 14 00:01 log.46376905._091741.job.log.tgz.1
[2025-10-14 00:02:01] -rw-------. 1 boincer umatlas      7819 Oct 14 00:01 heartbeat.json
[2025-10-14 00:02:01] -rw-r--r--. 1 boincer umatlas      6526 Oct 14 00:01 init_data.xml
[2025-10-14 00:02:01] -rw-r--r--. 1 boincer umatlas      8192 Oct 14 00:01 boinc_mmap_file
[2025-10-14 00:02:01] -rw-r--r--. 1 boincer umatlas        28 Oct 14 00:01 wrapper_checkpoint.txt
[2025-10-14 00:02:01] -rw-------. 1 boincer umatlas        96 Oct 14 00:02 pilot_heartbeat.json
[2025-10-14 00:02:01] -rw-------. 1 boincer umatlas       822 Oct 14 00:02 pilotlog.txt
[2025-10-14 00:02:01] -rw-------. 1 boincer umatlas   2887459 Oct 14 00:02 log.46376905._091741.job.log.1
[2025-10-14 00:02:01] -rw-------. 1 boincer umatlas       357 Oct 14 00:02 output.list
[2025-10-14 00:02:01] -rw-r--r--. 1 boincer umatlas       620 Oct 14 00:02 runtime_log
[2025-10-14 00:02:01] -rw-------. 1 boincer umatlas   3471360 Oct 14 00:02 result.tar.gz
[2025-10-14 00:02:01] -rw-r--r--. 1 boincer umatlas      8789 Oct 14 00:02 runtime_log.err
[2025-10-14 00:02:01] -rw-------. 1 boincer umatlas       784 Oct 14 00:02 1UFNDm9whP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxSQNDmTMsQEo.diag
[2025-10-14 00:02:01] -rw-r--r--. 1 boincer umatlas     23211 Oct 14 00:02 stderr.txt
[2025-10-14 00:02:02] HITS file was successfully produced:
[2025-10-14 00:02:02] -rw-------. 1 boincer umatlas 182928931 Oct 14 00:00 shared/HITS.pool.root.1
[2025-10-14 00:02:02]  *** Contents of shared directory: ***
[2025-10-14 00:02:02] total 392468
[2025-10-14 00:02:02] -rw-r--r--. 3 boincer umatlas 214895433 Oct 13 17:00 ATLAS.root_0
[2025-10-14 00:02:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 17:00 start_atlas.sh
[2025-10-14 00:02:02] -rw-r--r--. 2 boincer umatlas    565607 Oct 13 17:00 input.tar.gz
[2025-10-14 00:02:02] -rw-------. 1 boincer umatlas 182928931 Oct 14 00:00 HITS.pool.root.1
[2025-10-14 00:02:02] -rw-------. 1 boincer umatlas   3471360 Oct 14 00:02 result.tar.gz
00:02:03 (3002454): run_atlas exited; CPU time 76593.903514
00:02:03 (3002454): called boinc_finish(0)

</stderr_txt>
]]>

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