Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:41:34 (21227): wrapper (7.7.26015): starting
16:41:34 (21227): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 16:41:34] Arguments: --nthreads 8
[2025-10-13 16:41:34] Threads: 8
[2025-10-13 16:41:34] Checking for CVMFS
[2025-10-13 16:41:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 16:41:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 16:41:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 16:41:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 16:41:35] 2.11.2.0 3101 205566 85744 151672 3 1 16907754 20275200 1 130560 1 75210455 99.978 10480434 10376 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 16:41:35] CVMFS is ok
[2025-10-13 16:41:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 16:41:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 16:41:35] Further information can be found at the LHC@home message board.
[2025-10-13 16:41:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 16:41:35] Checking for apptainer binary...
[2025-10-13 16:41:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 16:41:35] Running /usr/bin/apptainer --version
[2025-10-13 16:41:35] apptainer version 1.3.2-1.el7
[2025-10-13 16:41:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 16:41:37] c-204-15.aglt2.org
[2025-10-13 16:41:37] apptainer works
[2025-10-13 16:41:37] Set ATHENA_PROC_NUMBER=8
[2025-10-13 16:41:37] Set ATHENA_CORE_NUMBER=8
[2025-10-13 16:41:37] Starting ATLAS job with PandaID=6843384997
[2025-10-13 16:41:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 18:59:17]  *** The last 200 lines of the pilot log: ***
[2025-10-13 18:59:17] 2025-10-13 22:58:09,028 | INFO     | fitting pss+swap vs Time
[2025-10-13 18:59:17] 2025-10-13 22:58:09,028 | INFO     | sum of square deviations: 746051197.5
[2025-10-13 18:59:17] 2025-10-13 22:58:09,029 | INFO     | sum of deviations: -4876973119.0
[2025-10-13 18:59:17] 2025-10-13 22:58:09,029 | INFO     | mean x: 1760392205.5
[2025-10-13 18:59:17] 2025-10-13 22:58:09,030 | INFO     | mean y: 2495619.880597015
[2025-10-13 18:59:17] 2025-10-13 22:58:09,030 | INFO     | -- intersect: 11510265453.760695
[2025-10-13 18:59:17] 2025-10-13 22:58:09,030 | INFO     | intersect: 11510265453.760695
[2025-10-13 18:59:17] 2025-10-13 22:58:09,030 | INFO     | chi2: 2.3426701863056705
[2025-10-13 18:59:17] 2025-10-13 22:58:09,030 | INFO     | sum of square deviations: 665612480.0
[2025-10-13 18:59:17] 2025-10-13 22:58:09,031 | INFO     | sum of deviations: 4190275928.000007
[2025-10-13 18:59:17] 2025-10-13 22:58:09,031 | INFO     | mean x: 1760392053.0
[2025-10-13 18:59:17] 2025-10-13 22:58:09,031 | INFO     | mean y: 2512305.2325581396
[2025-10-13 18:59:17] 2025-10-13 22:58:09,032 | INFO     | -- intersect: -11079804606.145685
[2025-10-13 18:59:17] 2025-10-13 22:58:09,032 | INFO     | intersect: -11079804606.145685
[2025-10-13 18:59:17] 2025-10-13 22:58:09,032 | INFO     | chi2: 1.580942362997648
[2025-10-13 18:59:17] 2025-10-13 22:58:09,032 | INFO     | current chi2=1.580942362997648 (change=32.51536762455014 %)
[2025-10-13 18:59:17] 2025-10-13 22:58:09,032 | INFO     | sum of square deviations: 591173875.0
[2025-10-13 18:59:17] 2025-10-13 22:58:09,033 | INFO     | sum of deviations: 4267905290.5000033
[2025-10-13 18:59:17] 2025-10-13 22:58:09,034 | INFO     | mean x: 1760391900.5
[2025-10-13 18:59:17] 2025-10-13 22:58:09,034 | INFO     | mean y: 2512464.3629032257
[2025-10-13 18:59:17] 2025-10-13 22:58:09,034 | INFO     | -- intersect: -12706415015.724585
[2025-10-13 18:59:17] 2025-10-13 22:58:09,034 | INFO     | intersect: -12706415015.724585
[2025-10-13 18:59:17] 2025-10-13 22:58:09,034 | INFO     | chi2: 1.5828447386164126
[2025-10-13 18:59:17] 2025-10-13 22:58:09,034 | INFO     | current chi2=1.5828447386164126 (change=-0.12033175043506864 %)
[2025-10-13 18:59:17] 2025-10-13 22:58:09,034 | INFO     | right removable region: 123
[2025-10-13 18:59:17] 2025-10-13 22:58:09,035 | INFO     | sum of square deviations: 665612480.0
[2025-10-13 18:59:17] 2025-10-13 22:58:09,036 | INFO     | sum of deviations: -24054647707.0
[2025-10-13 18:59:17] 2025-10-13 22:58:09,036 | INFO     | mean x: 1760392358.0
[2025-10-13 18:59:17] 2025-10-13 22:58:09,036 | INFO     | mean y: 2531325.379844961
[2025-10-13 18:59:17] 2025-10-13 22:58:09,036 | INFO     | -- intersect: 63621557816.26689
[2025-10-13 18:59:17] 2025-10-13 22:58:09,036 | INFO     | intersect: 63621557816.26689
[2025-10-13 18:59:17] 2025-10-13 22:58:09,036 | INFO     | chi2: 0.9473866542678162
[2025-10-13 18:59:17] 2025-10-13 22:58:09,037 | INFO     | current chi2=0.9473866542678162 (change=59.559537667493004 %)
[2025-10-13 18:59:17] 2025-10-13 22:58:09,037 | INFO     | sum of square deviations: 591173875.0
[2025-10-13 18:59:17] 2025-10-13 22:58:09,038 | INFO     | sum of deviations: -26233953470.999996
[2025-10-13 18:59:17] 2025-10-13 22:58:09,038 | INFO     | mean x: 1760392510.5
[2025-10-13 18:59:17] 2025-10-13 22:58:09,038 | INFO     | mean y: 2535790.580645161
[2025-10-13 18:59:17] 2025-10-13 22:58:09,038 | INFO     | -- intersect: 78121778138.9572
[2025-10-13 18:59:17] 2025-10-13 22:58:09,038 | INFO     | intersect: 78121778138.9572
[2025-10-13 18:59:17] 2025-10-13 22:58:09,039 | INFO     | chi2: 0.9092068321393555
[2025-10-13 18:59:17] 2025-10-13 22:58:09,039 | INFO     | current chi2=0.9092068321393555 (change=4.03001477342615 %)
[2025-10-13 18:59:17] 2025-10-13 22:58:09,039 | INFO     | left removable region: 20
[2025-10-13 18:59:17] 2025-10-13 22:58:09,039 | INFO     | sum of square deviations: 338804492.0
[2025-10-13 18:59:17] 2025-10-13 22:58:09,040 | INFO     | sum of deviations: -10158746813.000004
[2025-10-13 18:59:17] 2025-10-13 22:58:09,040 | INFO     | mean x: 1760392480.0
[2025-10-13 18:59:17] 2025-10-13 22:58:09,040 | INFO     | mean y: 2541338.359223301
[2025-10-13 18:59:17] 2025-10-13 22:58:09,040 | INFO     | -- intersect: 52786320532.84869
[2025-10-13 18:59:17] 2025-10-13 22:58:09,040 | INFO     | intersect: 52786320532.84869
[2025-10-13 18:59:17] 2025-10-13 22:58:09,041 | INFO     | chi2: 0.09560633270540529
[2025-10-13 18:59:17] 2025-10-13 22:58:09,041 | INFO     | -- intersect: 52786320532.84869
[2025-10-13 18:59:17] 2025-10-13 22:58:09,041 | INFO     | current memory leak: -29.98 B/s (using 103 data points, chi2=0.10)
[2025-10-13 18:59:17] 2025-10-13 22:58:09,042 | INFO     | could have reported an average CPU frequency of 1993 MHz (8 samples)
[2025-10-13 18:59:17] 2025-10-13 22:58:09,042 | INFO     | ..............................
[2025-10-13 18:59:17] 2025-10-13 22:58:09,042 | INFO     | . Timing measurements:
[2025-10-13 18:59:17] 2025-10-13 22:58:09,042 | INFO     | . get job = 0 s
[2025-10-13 18:59:17] 2025-10-13 22:58:09,042 | INFO     | . initial setup = 2 s
[2025-10-13 18:59:17] 2025-10-13 22:58:09,042 | INFO     | . payload setup = 8 s
[2025-10-13 18:59:17] 2025-10-13 22:58:09,042 | INFO     | . stage-in = 0 s
[2025-10-13 18:59:17] 2025-10-13 22:58:09,042 | INFO     | . payload execution = 8133 s
[2025-10-13 18:59:17] 2025-10-13 22:58:09,043 | INFO     | . stage-out = 0 s
[2025-10-13 18:59:17] 2025-10-13 22:58:09,043 | INFO     | . log creation = 0 s
[2025-10-13 18:59:17] 2025-10-13 22:58:09,043 | INFO     | ..............................
[2025-10-13 18:59:17] 2025-10-13 22:58:09,153 | INFO     | time since job start (8172s) is within the limit (172800.0s)
[2025-10-13 18:59:17] 2025-10-13 22:58:09,415 | INFO     | 
[2025-10-13 18:59:17] 2025-10-13 22:58:09,415 | INFO     | job summary report
[2025-10-13 18:59:17] 2025-10-13 22:58:09,416 | INFO     | --------------------------------------------------
[2025-10-13 18:59:17] 2025-10-13 22:58:09,416 | INFO     | PanDA job id: 6843384997
[2025-10-13 18:59:17] 2025-10-13 22:58:09,416 | INFO     | task id: 46676269
[2025-10-13 18:59:17] 2025-10-13 22:58:09,416 | INFO     | errors: (none)
[2025-10-13 18:59:17] 2025-10-13 22:58:09,416 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 18:59:17] 2025-10-13 22:58:09,416 | INFO     | pilot state: finished 
[2025-10-13 18:59:17] 2025-10-13 22:58:09,417 | INFO     | transexitcode: 0
[2025-10-13 18:59:17] 2025-10-13 22:58:09,417 | INFO     | exeerrorcode: 0
[2025-10-13 18:59:17] 2025-10-13 22:58:09,417 | INFO     | exeerrordiag: 
[2025-10-13 18:59:17] 2025-10-13 22:58:09,417 | INFO     | exitcode: 0
[2025-10-13 18:59:17] 2025-10-13 22:58:09,417 | INFO     | exitmsg: OK
[2025-10-13 18:59:17] 2025-10-13 22:58:09,418 | INFO     | cpuconsumptiontime: 58426 s
[2025-10-13 18:59:17] 2025-10-13 22:58:09,418 | INFO     | nevents: 400
[2025-10-13 18:59:17] 2025-10-13 22:58:09,418 | INFO     | neventsw: 0
[2025-10-13 18:59:17] 2025-10-13 22:58:09,418 | INFO     | pid: 31813
[2025-10-13 18:59:17] 2025-10-13 22:58:09,418 | INFO     | pgrp: 31813
[2025-10-13 18:59:17] 2025-10-13 22:58:09,418 | INFO     | corecount: 8
[2025-10-13 18:59:17] 2025-10-13 22:58:09,419 | INFO     | event service: False
[2025-10-13 18:59:17] 2025-10-13 22:58:09,419 | INFO     | sizes: {0: 2348804, 6: 2349066, 11: 2349094, 8146: 2376835, 8147: 2385833, 8148: 2385889, 8154: 2386211}
[2025-10-13 18:59:17] 2025-10-13 22:58:09,419 | INFO     | --------------------------------------------------
[2025-10-13 18:59:17] 2025-10-13 22:58:09,419 | INFO     | 
[2025-10-13 18:59:17] 2025-10-13 22:58:09,419 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 18:59:17] 2025-10-13 22:58:09,451 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 18:59:17] 2025-10-13 22:58:09,451 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 18:59:17] 2025-10-13 22:58:09,451 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 18:59:17] 2025-10-13 22:58:09,452 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 18:59:17] 2025-10-13 22:58:09,452 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 18:59:17] 2025-10-13 22:58:09,452 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 18:59:17] 2025-10-13 22:58:09,452 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 18:59:17] 2025-10-13 22:58:09,452 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 18:59:17] 2025-10-13 22:58:09,452 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 18:59:17] 2025-10-13 22:58:09,453 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 18:59:17] 2025-10-13 22:58:09,453 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 18:59:17] 2025-10-13 22:58:09,453 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 18:59:17] 2025-10-13 22:58:09,453 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 18:59:17] 2025-10-13 22:58:09,453 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 18:59:17] 2025-10-13 22:58:09,453 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 18:59:17] 2025-10-13 22:58:09,454 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 18:59:17] 2025-10-13 22:58:09,454 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 18:59:17] 2025-10-13 22:58:09,454 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 18:59:17] 2025-10-13 22:58:09,454 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 18:59:17] 2025-10-13 22:58:09,454 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 18:59:17] 2025-10-13 22:58:09,455 | INFO     | job 6843384997 has completed (purged errors)
[2025-10-13 18:59:17] 2025-10-13 22:58:09,455 | INFO     | overall cleanup function is called
[2025-10-13 18:59:17] 2025-10-13 22:58:10,463 | INFO     | --- collectZombieJob: --- 10, [31813]
[2025-10-13 18:59:17] 2025-10-13 22:58:10,463 | INFO     | zombie collector waiting for pid 31813
[2025-10-13 18:59:17] 2025-10-13 22:58:10,464 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 18:59:17] 2025-10-13 22:58:10,464 | INFO     | collected zombie processes
[2025-10-13 18:59:17] 2025-10-13 22:58:10,464 | INFO     | will attempt to kill all subprocesses of pid=31813
[2025-10-13 18:59:17] 2025-10-13 22:58:10,555 | INFO     | process IDs to be killed: [31813] (in reverse order)
[2025-10-13 18:59:17] 2025-10-13 22:58:10,612 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 18:59:17] 2025-10-13 22:58:10,612 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 18:59:17] 2025-10-13 22:58:10,617 | INFO     | did not find any defunct processes belonging to 31813
[2025-10-13 18:59:17] 2025-10-13 22:58:10,621 | INFO     | did not find any defunct processes belonging to 31813
[2025-10-13 18:59:17] 2025-10-13 22:58:10,621 | INFO     | ready for new job
[2025-10-13 18:59:17] 2025-10-13 22:58:10,621 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 18:59:17] 2025-10-13 22:58:10,624 | INFO     | ***************************************
[2025-10-13 18:59:17] 2025-10-13 22:58:10,624 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 18:59:17] 2025-10-13 22:58:10,624 | INFO     | ***************************************
[2025-10-13 18:59:17] 2025-10-13 22:58:10,624 | INFO     | 
[2025-10-13 18:59:17] 2025-10-13 22:58:10,625 | INFO     | architecture information:
[2025-10-13 18:59:17] 2025-10-13 22:58:10,625 | INFO     | executing command: cat /etc/os-release
[2025-10-13 18:59:17] 2025-10-13 22:58:10,644 | INFO     | cat /etc/os-release:
[2025-10-13 18:59:17] NAME="CentOS Linux"
[2025-10-13 18:59:17] VERSION="7 (Core)"
[2025-10-13 18:59:17] ID="centos"
[2025-10-13 18:59:17] ID_LIKE="rhel fedora"
[2025-10-13 18:59:17] VERSION_ID="7"
[2025-10-13 18:59:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 18:59:17] ANSI_COLOR="0;31"
[2025-10-13 18:59:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 18:59:17] HOME_URL="https://www.centos.org/"
[2025-10-13 18:59:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 18:59:17] 
[2025-10-13 18:59:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 18:59:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 18:59:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 18:59:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 18:59:17] 
[2025-10-13 18:59:17] 2025-10-13 22:58:10,645 | INFO     | ***************************************
[2025-10-13 18:59:17] 2025-10-13 22:58:11,147 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 18:59:17] 2025-10-13 22:58:11,169 | INFO     | sufficient remaining disk space (18568183808 B)
[2025-10-13 18:59:17] 2025-10-13 22:58:11,169 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 18:59:17] 2025-10-13 22:58:11,169 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 18:59:17] 2025-10-13 22:58:11,170 | INFO     | update_server=False
[2025-10-13 18:59:17] 2025-10-13 22:58:11,170 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 18:59:17] 2025-10-13 22:58:11,239 | INFO     | all data control threads have been joined
[2025-10-13 18:59:17] 2025-10-13 22:58:11,249 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 18:59:17] 2025-10-13 22:58:11,249 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 18:59:17] 2025-10-13 22:58:11,250 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:59:17] 2025-10-13 22:58:11,250 | INFO     | will abort loop
[2025-10-13 18:59:17] 2025-10-13 22:58:11,634 | INFO     | all payload control threads have been joined
[2025-10-13 18:59:17] 2025-10-13 22:58:12,175 | INFO     | [job] retrieve thread has finished
[2025-10-13 18:59:17] 2025-10-13 22:58:12,245 | INFO     | [data] control thread has finished
[2025-10-13 18:59:17] 2025-10-13 22:58:12,255 | INFO     | [job] job monitor thread has finished
[2025-10-13 18:59:17] 2025-10-13 22:58:12,327 | INFO     | [payload] failed_post thread has finished
[2025-10-13 18:59:17] 2025-10-13 22:58:12,413 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 18:59:17] 2025-10-13 22:58:12,434 | INFO     | all job control threads have been joined
[2025-10-13 18:59:17] 2025-10-13 22:58:12,640 | INFO     | [payload] control thread has finished
[2025-10-13 18:59:17] 2025-10-13 22:58:12,794 | INFO     | [payload] validate_post thread has finished
[2025-10-13 18:59:17] 2025-10-13 22:58:12,920 | INFO     | [data] copytool_in thread has finished
[2025-10-13 18:59:17] 2025-10-13 22:58:12,921 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 18:59:17] 2025-10-13 22:58:13,241 | INFO     | [job] validate thread has finished
[2025-10-13 18:59:17] 2025-10-13 22:58:13,440 | INFO     | [job] control thread has finished
[2025-10-13 18:59:17] 2025-10-13 22:58:13,496 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 18:59:17] 2025-10-13 22:58:13,546 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 18:59:17] 2025-10-13 22:58:13,850 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 18:59:17] 2025-10-13 22:58:14,151 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:59:17] 2025-10-13 22:58:14,419 | INFO     | [data] copytool_out thread has finished
[2025-10-13 18:59:17] 2025-10-13 22:58:15,156 | INFO     | [job] queue monitor thread has finished
[2025-10-13 18:59:17] 2025-10-13 22:58:17,855 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 18:59:17] 2025-10-13 22:58:21,585 | INFO     | job.realtimelogging is not enabled
[2025-10-13 18:59:17] 2025-10-13 22:58:22,590 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 18:59:17] 2025-10-13 22:58:42,359 | INFO     | PID=25270 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 18:59:17] 2025-10-13 22:58:42,359 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 18:59:17] 2025-10-13 22:58:42,360 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 18:59:17] 2025-10-13 22:58:42,360 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 18:59:17] 2025-10-13 22:59:09,710 | INFO     | [monitor] cgroup control has ended
[2025-10-13 18:59:17] 2025-10-13 22:59:11,717 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140496333453120)>', '<ExcThread(monitor, started 140495728654080)>']
[2025-10-13 18:59:17] 2025-10-13 22:59:12,501 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 18:59:17] 2025-10-13 22:59:12,502 | INFO     | [monitor] control thread has ended
[2025-10-13 18:59:17] 2025-10-13 22:59:16,743 | INFO     | all workflow threads have been joined
[2025-10-13 18:59:17] 2025-10-13 22:59:16,743 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 18:59:17] 2025-10-13 22:59:16,743 | INFO     | traces error code: 0
[2025-10-13 18:59:17] 2025-10-13 22:59:16,744 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 18:59:17] 2025-10-13 22:59:16,873 [wrapper] ==== pilot stdout END ====
[2025-10-13 18:59:17] 2025-10-13 22:59:16,878 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 18:59:17] 2025-10-13 22:59:16,883 [wrapper] pilotpid: 25270
[2025-10-13 18:59:17] 2025-10-13 22:59:16,888 [wrapper] Pilot exit status: 0
[2025-10-13 18:59:17] 2025-10-13 22:59:16,906 [wrapper] pandaids: 6843384997
[2025-10-13 18:59:17] 2025-10-13 22:59:16,959 [wrapper] cleanup supervisor_pilot 17407 25271
[2025-10-13 18:59:17] 2025-10-13 22:59:16,965 [wrapper] Test setup, not cleaning
[2025-10-13 18:59:17] 2025-10-13 22:59:16,970 [wrapper] apfmon messages muted
[2025-10-13 18:59:17] 2025-10-13 22:59:16,976 [wrapper] ==== wrapper stdout END ====
[2025-10-13 18:59:17] 2025-10-13 22:59:16,980 [wrapper] ==== wrapper stderr END ====
[2025-10-13 18:59:17]  *** Error codes and diagnostics ***
[2025-10-13 18:59:17]     "exeErrorCode": 0,
[2025-10-13 18:59:17]     "exeErrorDiag": "",
[2025-10-13 18:59:17]     "pilotErrorCode": 0,
[2025-10-13 18:59:17]     "pilotErrorDiag": "",
[2025-10-13 18:59:17]  *** Listing of results directory ***
[2025-10-13 18:59:17] total 424996
[2025-10-13 18:59:17] -rwx------ 1 boincer umatlas     36292 Oct 13 16:40 runpilot2-wrapper.sh
[2025-10-13 18:59:17] -rw-r--r-- 1 boincer umatlas      5112 Oct 13 16:40 queuedata.json
[2025-10-13 18:59:17] -rw-r--r-- 1 boincer umatlas    557409 Oct 13 16:40 pilot3.tar.gz
[2025-10-13 18:59:17] -rw-r--r-- 1 boincer umatlas       100 Oct 13 16:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 18:59:17] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 16:41 run_atlas
[2025-10-13 18:59:17] -rw-r--r-- 1 boincer umatlas       105 Oct 13 16:41 job.xml
[2025-10-13 18:59:17] -rw-r--r-- 2 boincer umatlas 224971093 Oct 13 16:41 EVNT.46676267._004726.pool.root.1
[2025-10-13 18:59:17] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 16:41 start_atlas.sh
[2025-10-13 18:59:17] drwxrwx--x 2 boincer umatlas      4096 Oct 13 16:41 shared
[2025-10-13 18:59:17] -rw-r--r-- 2 boincer umatlas    569673 Oct 13 16:41 input.tar.gz
[2025-10-13 18:59:17] -rw-r--r-- 1 boincer umatlas         0 Oct 13 16:41 boinc_lockfile
[2025-10-13 18:59:17] -rw-r--r-- 1 boincer umatlas      2548 Oct 13 16:41 pandaJob.out
[2025-10-13 18:59:17] -rw------- 1 boincer umatlas    972799 Oct 13 16:41 agis_schedconf.cvmfs.json
[2025-10-13 18:59:17] -rw------- 1 boincer umatlas   1560580 Oct 13 16:41 agis_ddmendpoints.agis.ALL.json
[2025-10-13 18:59:17] drwx------ 5 boincer umatlas      4096 Oct 13 16:41 pilot3
[2025-10-13 18:59:17] -rw-r--r-- 1 boincer umatlas      5910 Oct 13 18:56 init_data.xml
[2025-10-13 18:59:17] -rw------- 1 boincer umatlas 203312182 Oct 13 18:57 HITS.46676269._097002.pool.root.1
[2025-10-13 18:59:17] -rw-r--r-- 1 boincer umatlas       530 Oct 13 18:57 boinc_task_state.xml
[2025-10-13 18:59:17] -rw------- 1 boincer umatlas        95 Oct 13 18:57 pilot_heartbeat.json
[2025-10-13 18:59:17] -rw------- 1 boincer umatlas      1049 Oct 13 18:57 memory_monitor_summary.json
[2025-10-13 18:59:17] -rw------- 1 boincer umatlas    363566 Oct 13 18:58 log.46676269._097002.job.log.tgz.1
[2025-10-13 18:59:17] -rw------- 1 boincer umatlas      7851 Oct 13 18:58 heartbeat.json
[2025-10-13 18:59:17] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 18:58 boinc_mmap_file
[2025-10-13 18:59:17] -rw-r--r-- 1 boincer umatlas        27 Oct 13 18:58 wrapper_checkpoint.txt
[2025-10-13 18:59:17] -rw------- 1 boincer umatlas      5004 Oct 13 18:59 pilotlog.txt
[2025-10-13 18:59:17] -rw------- 1 boincer umatlas   1145428 Oct 13 18:59 log.46676269._097002.job.log.1
[2025-10-13 18:59:17] -rw------- 1 boincer umatlas       357 Oct 13 18:59 output.list
[2025-10-13 18:59:17] -rw-r--r-- 1 boincer umatlas       620 Oct 13 18:59 runtime_log
[2025-10-13 18:59:17] -rw------- 1 boincer umatlas   1525760 Oct 13 18:59 result.tar.gz
[2025-10-13 18:59:17] -rw-r--r-- 1 boincer umatlas      8703 Oct 13 18:59 runtime_log.err
[2025-10-13 18:59:17] -rw------- 1 boincer umatlas       661 Oct 13 18:59 J7zNDmvWeS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5omNDmg9DqOn.diag
[2025-10-13 18:59:17] -rw-r--r-- 1 boincer umatlas     20893 Oct 13 18:59 stderr.txt
[2025-10-13 18:59:17] HITS file was successfully produced:
[2025-10-13 18:59:17] -rw------- 1 boincer umatlas 203312182 Oct 13 18:57 shared/HITS.pool.root.1
[2025-10-13 18:59:17]  *** Contents of shared directory: ***
[2025-10-13 18:59:17] total 420320
[2025-10-13 18:59:17] -rw-r--r-- 2 boincer umatlas 224971093 Oct 13 16:41 ATLAS.root_0
[2025-10-13 18:59:17] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 16:41 start_atlas.sh
[2025-10-13 18:59:17] -rw-r--r-- 2 boincer umatlas    569673 Oct 13 16:41 input.tar.gz
[2025-10-13 18:59:17] -rw------- 1 boincer umatlas 203312182 Oct 13 18:57 HITS.pool.root.1
[2025-10-13 18:59:17] -rw------- 1 boincer umatlas   1525760 Oct 13 18:59 result.tar.gz
18:59:18 (21227): run_atlas exited; CPU time 58365.995164
18:59:18 (21227): called boinc_finish(0)

</stderr_txt>
]]>

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