Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:21:51 (4526): wrapper (7.7.26015): starting
16:21:51 (4526): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 16:21:51] Arguments: --nthreads 12
[2025-10-13 16:21:51] Threads: 12
[2025-10-13 16:21:51] Checking for CVMFS
[2025-10-13 16:21:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 16:21:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 16:21:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 16:21:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 16:21:52] 2.11.2.0 2913 224795 101776 151672 3 1 16895345 20275201 1 130560 1 110427757 99.984 13393379 12581 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 16:21:52] CVMFS is ok
[2025-10-13 16:21:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 16:21:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 16:21:52] Further information can be found at the LHC@home message board.
[2025-10-13 16:21:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 16:21:52] Checking for apptainer binary...
[2025-10-13 16:21:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 16:21:52] Running /usr/bin/apptainer --version
[2025-10-13 16:21:52] apptainer version 1.3.2-1.el7
[2025-10-13 16:21:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 16:21:53] c-205-6.aglt2.org
[2025-10-13 16:21:53] apptainer works
[2025-10-13 16:21:53] Set ATHENA_PROC_NUMBER=12
[2025-10-13 16:21:53] Set ATHENA_CORE_NUMBER=12
[2025-10-13 16:21:53] Starting ATLAS job with PandaID=6839660578
[2025-10-13 16:21:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 17:36:28]  *** The last 200 lines of the pilot log: ***
[2025-10-13 17:36:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 17:36:28]  replicas=None
[2025-10-13 17:36:28]  scope=mc23_13p6TeV
[2025-10-13 17:36:28]  status=None
[2025-10-13 17:36:28]  status_code=0
[2025-10-13 17:36:28]  storage_token=
[2025-10-13 17:36:28]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839660578/log.46676269._074069.job.log.tgz.1
[2025-10-13 17:36:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/98/f7/log.46676269._074069.job.log.tgz.1
[2025-10-13 17:36:28]  workdir=None
[2025-10-13 17:36:28] ]
[2025-10-13 17:36:28] 2025-10-13 21:35:47,437 | INFO     | transferring file log.46676269._074069.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839660578/log.46676269._074069.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 17:36:28] 2025-10-13 21:35:47,437 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839660578/log.46676269._074069.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._074069.job
[2025-10-13 17:36:28] 2025-10-13 21:35:47,458 | INFO     | adding to output.list: log.46676269._074069.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/98/f7/log.46676269._074069.job.log.tg
[2025-10-13 17:36:28] 2025-10-13 21:35:47,459 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 17:36:28] 2025-10-13 21:35:47,459 | INFO     | summary of transferred files:
[2025-10-13 17:36:28] 2025-10-13 21:35:47,460 | INFO     |  -- lfn=log.46676269._074069.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 17:36:28] 2025-10-13 21:35:47,460 | INFO     | stage-out finished correctly
[2025-10-13 17:36:28] 2025-10-13 21:35:49,081 | INFO     | time since job start (4420s) is within the limit (172800.0s)
[2025-10-13 17:36:28] 2025-10-13 21:35:49,721 | INFO     | monitor loop #332: job 0:6839660578 is in state 'finished'
[2025-10-13 17:36:28] 2025-10-13 21:35:49,721 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 17:36:28] 2025-10-13 21:35:50,850 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 17:36:28] 2025-10-13 21:35:51,078 | INFO     | job 6839660578 has state=finished
[2025-10-13 17:36:28] 2025-10-13 21:35:51,078 | INFO     | preparing for final server update for job 6839660578 in state='finished'
[2025-10-13 17:36:28] 2025-10-13 21:35:51,079 | INFO     | this job has now completed (state=finished)
[2025-10-13 17:36:28] 2025-10-13 21:35:51,079 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 17:36:28] 2025-10-13 21:35:51,079 | INFO     | log transfer has been attempted: DONE
[2025-10-13 17:36:28] 2025-10-13 21:35:51,079 | INFO     | job 6839660578 has finished - writing final server update
[2025-10-13 17:36:28] 2025-10-13 21:35:51,080 | INFO     | total number of processed events: 400 (read)
[2025-10-13 17:36:28] 2025-10-13 21:35:51,080 | INFO     | executing command: lscpu
[2025-10-13 17:36:28] 2025-10-13 21:35:51,085 | INFO     | time since job start (4422s) is within the limit (172800.0s)
[2025-10-13 17:36:28] 2025-10-13 21:35:51,106 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 17:36:28] 2025-10-13 21:35:52,224 | INFO     | monitor loop #333: job 0:6839660578 is in state 'finished'
[2025-10-13 17:36:28] 2025-10-13 21:35:52,224 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 17:36:28] 2025-10-13 21:35:53,091 | INFO     | time since job start (4424s) is within the limit (172800.0s)
[2025-10-13 17:36:28] 2025-10-13 21:35:54,727 | INFO     | monitor loop #334: job 0:6839660578 is in state 'finished'
[2025-10-13 17:36:28] 2025-10-13 21:35:54,727 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 17:36:28] 2025-10-13 21:35:55,096 | INFO     | time since job start (4426s) is within the limit (172800.0s)
[2025-10-13 17:36:28] 2025-10-13 21:35:55,738 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 17:36:28] 2025-10-13 21:35:55,742 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.75
[2025-10-13 17:36:28] 2025-10-13 21:35:55,744 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839660578/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 17:36:28] 2025-10-13 21:35:55,745 | INFO     | extracted standard info from prmon json
[2025-10-13 17:36:28] 2025-10-13 21:35:55,745 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 17:36:28] 2025-10-13 21:35:55,746 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 17:36:28] 2025-10-13 21:35:55,746 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 17:36:28] 2025-10-13 21:35:55,746 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 17:36:28] 2025-10-13 21:35:55,749 | INFO     | fitting pss+swap vs Time
[2025-10-13 17:36:28] 2025-10-13 21:35:55,749 | INFO     | sum of square deviations: 85136480.0
[2025-10-13 17:36:28] 2025-10-13 21:35:55,749 | INFO     | sum of deviations: -4564617556.0
[2025-10-13 17:36:28] 2025-10-13 21:35:55,749 | INFO     | mean x: 1760389215.0
[2025-10-13 17:36:28] 2025-10-13 21:35:55,749 | INFO     | mean y: 2891481.0
[2025-10-13 17:36:28] 2025-10-13 21:35:55,749 | INFO     | -- intersect: 94386679913.19803
[2025-10-13 17:36:28] 2025-10-13 21:35:55,750 | INFO     | intersect: 94386679913.19803
[2025-10-13 17:36:28] 2025-10-13 21:35:55,750 | INFO     | chi2: 0.11071242513573859
[2025-10-13 17:36:28] 2025-10-13 21:35:55,750 | INFO     | -- intersect: 94386679913.19803
[2025-10-13 17:36:28] 2025-10-13 21:35:55,750 | INFO     | current memory leak: -53.62 B/s (using 65 data points, chi2=0.11)
[2025-10-13 17:36:28] 2025-10-13 21:35:55,750 | INFO     | could have reported an average CPU frequency of 2060 MHz (6 samples)
[2025-10-13 17:36:28] 2025-10-13 21:35:55,750 | INFO     | ..............................
[2025-10-13 17:36:28] 2025-10-13 21:35:55,751 | INFO     | . Timing measurements:
[2025-10-13 17:36:28] 2025-10-13 21:35:55,751 | INFO     | . get job = 0 s
[2025-10-13 17:36:28] 2025-10-13 21:35:55,751 | INFO     | . initial setup = 2 s
[2025-10-13 17:36:28] 2025-10-13 21:35:55,751 | INFO     | . payload setup = 7 s
[2025-10-13 17:36:28] 2025-10-13 21:35:55,751 | INFO     | . stage-in = 0 s
[2025-10-13 17:36:28] 2025-10-13 21:35:55,751 | INFO     | . payload execution = 4389 s
[2025-10-13 17:36:28] 2025-10-13 21:35:55,751 | INFO     | . stage-out = 0 s
[2025-10-13 17:36:28] 2025-10-13 21:35:55,751 | INFO     | . log creation = 0 s
[2025-10-13 17:36:28] 2025-10-13 21:35:55,751 | INFO     | ..............................
[2025-10-13 17:36:28] 2025-10-13 21:35:55,833 | INFO     | 
[2025-10-13 17:36:28] 2025-10-13 21:35:55,833 | INFO     | job summary report
[2025-10-13 17:36:28] 2025-10-13 21:35:55,833 | INFO     | --------------------------------------------------
[2025-10-13 17:36:28] 2025-10-13 21:35:55,833 | INFO     | PanDA job id: 6839660578
[2025-10-13 17:36:28] 2025-10-13 21:35:55,833 | INFO     | task id: 46676269
[2025-10-13 17:36:28] 2025-10-13 21:35:55,834 | INFO     | errors: (none)
[2025-10-13 17:36:28] 2025-10-13 21:35:55,834 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 17:36:28] 2025-10-13 21:35:55,834 | INFO     | pilot state: finished 
[2025-10-13 17:36:28] 2025-10-13 21:35:55,834 | INFO     | transexitcode: 0
[2025-10-13 17:36:28] 2025-10-13 21:35:55,834 | INFO     | exeerrorcode: 0
[2025-10-13 17:36:28] 2025-10-13 21:35:55,834 | INFO     | exeerrordiag: 
[2025-10-13 17:36:28] 2025-10-13 21:35:55,834 | INFO     | exitcode: 0
[2025-10-13 17:36:28] 2025-10-13 21:35:55,834 | INFO     | exitmsg: OK
[2025-10-13 17:36:28] 2025-10-13 21:35:55,834 | INFO     | cpuconsumptiontime: 47524 s
[2025-10-13 17:36:28] 2025-10-13 21:35:55,834 | INFO     | nevents: 400
[2025-10-13 17:36:28] 2025-10-13 21:35:55,835 | INFO     | neventsw: 0
[2025-10-13 17:36:28] 2025-10-13 21:35:55,835 | INFO     | pid: 14669
[2025-10-13 17:36:28] 2025-10-13 21:35:55,835 | INFO     | pgrp: 14669
[2025-10-13 17:36:28] 2025-10-13 21:35:55,835 | INFO     | corecount: 12
[2025-10-13 17:36:28] 2025-10-13 21:35:55,835 | INFO     | event service: False
[2025-10-13 17:36:28] 2025-10-13 21:35:55,835 | INFO     | sizes: {0: 2348635, 1: 2348834, 6: 2349096, 11: 2349124, 4400: 2375228, 4403: 2384226, 4406: 2384410, 4411: 2384604}
[2025-10-13 17:36:28] 2025-10-13 21:35:55,835 | INFO     | --------------------------------------------------
[2025-10-13 17:36:28] 2025-10-13 21:35:55,835 | INFO     | 
[2025-10-13 17:36:28] 2025-10-13 21:35:55,835 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 17:36:28] 2025-10-13 21:35:55,859 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 17:36:28] 2025-10-13 21:35:55,859 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 17:36:28] 2025-10-13 21:35:55,859 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 17:36:28] 2025-10-13 21:35:55,859 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 17:36:28] 2025-10-13 21:35:55,860 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 17:36:28] 2025-10-13 21:35:55,860 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 17:36:28] 2025-10-13 21:35:55,860 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 17:36:28] 2025-10-13 21:35:55,860 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 17:36:28] 2025-10-13 21:35:55,860 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 17:36:28] 2025-10-13 21:35:55,860 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 17:36:28] 2025-10-13 21:35:55,861 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 17:36:28] 2025-10-13 21:35:55,861 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 17:36:28] 2025-10-13 21:35:55,861 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 17:36:28] 2025-10-13 21:35:55,861 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 17:36:28] 2025-10-13 21:35:55,861 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 17:36:28] 2025-10-13 21:35:55,861 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 17:36:28] 2025-10-13 21:35:55,862 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 17:36:28] 2025-10-13 21:35:55,862 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 17:36:28] 2025-10-13 21:35:55,862 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 17:36:28] 2025-10-13 21:35:55,862 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 17:36:28] 2025-10-13 21:35:55,862 | INFO     | job 6839660578 has completed (purged errors)
[2025-10-13 17:36:28] 2025-10-13 21:35:55,863 | INFO     | overall cleanup function is called
[2025-10-13 17:36:28] 2025-10-13 21:35:56,871 | INFO     | --- collectZombieJob: --- 10, [14669]
[2025-10-13 17:36:28] 2025-10-13 21:35:56,871 | INFO     | zombie collector waiting for pid 14669
[2025-10-13 17:36:28] 2025-10-13 21:35:56,871 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 17:36:28] 2025-10-13 21:35:56,871 | INFO     | collected zombie processes
[2025-10-13 17:36:28] 2025-10-13 21:35:56,872 | INFO     | will attempt to kill all subprocesses of pid=14669
[2025-10-13 17:36:28] 2025-10-13 21:35:56,962 | INFO     | process IDs to be killed: [14669] (in reverse order)
[2025-10-13 17:36:28] 2025-10-13 21:35:57,014 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 17:36:28] 2025-10-13 21:35:57,015 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 17:36:28] 2025-10-13 21:35:57,018 | INFO     | did not find any defunct processes belonging to 14669
[2025-10-13 17:36:28] 2025-10-13 21:35:57,021 | INFO     | did not find any defunct processes belonging to 14669
[2025-10-13 17:36:28] 2025-10-13 21:35:57,021 | INFO     | ready for new job
[2025-10-13 17:36:28] 2025-10-13 21:35:57,021 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 17:36:28] 2025-10-13 21:35:57,022 | INFO     | ***************************************
[2025-10-13 17:36:28] 2025-10-13 21:35:57,022 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 17:36:28] 2025-10-13 21:35:57,022 | INFO     | ***************************************
[2025-10-13 17:36:28] 2025-10-13 21:35:57,022 | INFO     | 
[2025-10-13 17:36:28] 2025-10-13 21:35:57,023 | INFO     | architecture information:
[2025-10-13 17:36:28] 2025-10-13 21:35:57,024 | INFO     | executing command: cat /etc/os-release
[2025-10-13 17:36:28] 2025-10-13 21:35:57,040 | INFO     | cat /etc/os-release:
[2025-10-13 17:36:28] NAME="CentOS Linux"
[2025-10-13 17:36:28] VERSION="7 (Core)"
[2025-10-13 17:36:28] ID="centos"
[2025-10-13 17:36:28] ID_LIKE="rhel fedora"
[2025-10-13 17:36:28] VERSION_ID="7"
[2025-10-13 17:36:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 17:36:28] ANSI_COLOR="0;31"
[2025-10-13 17:36:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 17:36:28] HOME_URL="https://www.centos.org/"
[2025-10-13 17:36:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 17:36:28] 
[2025-10-13 17:36:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 17:36:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 17:36:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 17:36:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 17:36:28] 
[2025-10-13 17:36:28] 2025-10-13 21:35:57,040 | INFO     | ***************************************
[2025-10-13 17:36:28] 2025-10-13 21:35:57,543 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 17:36:28] 2025-10-13 21:35:57,559 | INFO     | sufficient remaining disk space (29354885120 B)
[2025-10-13 17:36:28] 2025-10-13 21:35:57,559 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 17:36:28] 2025-10-13 21:35:57,560 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 17:36:28] 2025-10-13 21:35:57,560 | INFO     | update_server=False
[2025-10-13 17:36:28] 2025-10-13 21:35:57,560 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 17:36:28] 2025-10-13 21:35:57,560 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 17:36:28] 2025-10-13 21:35:57,561 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 17:36:28] 2025-10-13 21:35:57,717 | INFO     | all payload control threads have been joined
[2025-10-13 17:36:28] 2025-10-13 21:35:58,057 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 17:36:28] 2025-10-13 21:35:58,136 | INFO     | all data control threads have been joined
[2025-10-13 17:36:28] 2025-10-13 21:35:58,234 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 17:36:28] 2025-10-13 21:35:58,234 | INFO     | aborting loop
[2025-10-13 17:36:28] 2025-10-13 21:35:58,566 | INFO     | [job] retrieve thread has finished
[2025-10-13 17:36:28] 2025-10-13 21:35:58,566 | INFO     | [job] queue monitor thread has finished
[2025-10-13 17:36:28] 2025-10-13 21:35:58,592 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 17:36:28] 2025-10-13 21:35:58,723 | INFO     | [payload] control thread has finished
[2025-10-13 17:36:28] 2025-10-13 21:35:58,877 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 17:36:28] 2025-10-13 21:35:59,052 | INFO     | all job control threads have been joined
[2025-10-13 17:36:28] 2025-10-13 21:35:59,061 | INFO     | [data] copytool_in thread has finished
[2025-10-13 17:36:28] 2025-10-13 21:35:59,141 | INFO     | [data] control thread has finished
[2025-10-13 17:36:28] 2025-10-13 21:35:59,235 | INFO     | [job] job monitor thread has finished
[2025-10-13 17:36:28] 2025-10-13 21:35:59,242 | INFO     | [payload] validate_post thread has finished
[2025-10-13 17:36:28] 2025-10-13 21:35:59,302 | INFO     | [payload] failed_post thread has finished
[2025-10-13 17:36:28] 2025-10-13 21:35:59,621 | INFO     | [job] validate thread has finished
[2025-10-13 17:36:28] 2025-10-13 21:35:59,850 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 17:36:28] 2025-10-13 21:36:00,041 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 17:36:28] 2025-10-13 21:36:00,057 | INFO     | [job] control thread has finished
[2025-10-13 17:36:28] 2025-10-13 21:36:00,062 | INFO     | [data] copytool_out thread has finished
[2025-10-13 17:36:28] 2025-10-13 21:36:01,566 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 17:36:28] 2025-10-13 21:36:15,152 | INFO     | [monitor] cgroup control has ended
[2025-10-13 17:36:28] 2025-10-13 21:36:15,690 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139803001608000)>', '<ExcThread(monitor, started 139802561197824)>']
[2025-10-13 17:36:28] 2025-10-13 21:36:20,693 | INFO     | all workflow threads have been joined
[2025-10-13 17:36:28] 2025-10-13 21:36:20,693 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 17:36:28] 2025-10-13 21:36:20,693 | INFO     | traces error code: 0
[2025-10-13 17:36:28] 2025-10-13 21:36:20,693 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 17:36:28] 2025-10-13 21:36:28,306 | INFO     | PID=8298 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 17:36:28] 2025-10-13 21:36:28,307 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 17:36:28] 2025-10-13 21:36:28,307 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 17:36:28] 2025-10-13 21:36:28,308 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 17:36:28] 2025-10-13 21:36:28,308 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 17:36:28] 2025-10-13 21:36:28,308 | INFO     | [monitor] control thread has ended
[2025-10-13 17:36:28] 2025-10-13 21:36:28,410 [wrapper] ==== pilot stdout END ====
[2025-10-13 17:36:28] 2025-10-13 21:36:28,413 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 17:36:28] 2025-10-13 21:36:28,417 [wrapper] pilotpid: 8298
[2025-10-13 17:36:28] 2025-10-13 21:36:28,420 [wrapper] Pilot exit status: 0
[2025-10-13 17:36:28] 2025-10-13 21:36:28,435 [wrapper] pandaids: 6839660578
[2025-10-13 17:36:28] 2025-10-13 21:36:28,475 [wrapper] cleanup supervisor_pilot 17418 8299
[2025-10-13 17:36:28] 2025-10-13 21:36:28,478 [wrapper] Test setup, not cleaning
[2025-10-13 17:36:28] 2025-10-13 21:36:28,482 [wrapper] apfmon messages muted
[2025-10-13 17:36:28] 2025-10-13 21:36:28,486 [wrapper] ==== wrapper stdout END ====
[2025-10-13 17:36:28] 2025-10-13 21:36:28,490 [wrapper] ==== wrapper stderr END ====
[2025-10-13 17:36:28]  *** Error codes and diagnostics ***
[2025-10-13 17:36:28]     "exeErrorCode": 0,
[2025-10-13 17:36:28]     "exeErrorDiag": "",
[2025-10-13 17:36:28]     "pilotErrorCode": 0,
[2025-10-13 17:36:28]     "pilotErrorDiag": "",
[2025-10-13 17:36:28]  *** Listing of results directory ***
[2025-10-13 17:36:28] total 419364
[2025-10-13 17:36:28] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 02:54 pilot3.tar.gz
[2025-10-13 17:36:28] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 03:56 queuedata.json
[2025-10-13 17:36:28] -rwx------ 1 boincer umatlas     36292 Oct 12 03:57 runpilot2-wrapper.sh
[2025-10-13 17:36:28] -rw-r--r-- 1 boincer umatlas       100 Oct 13 16:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 17:36:28] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 16:21 run_atlas
[2025-10-13 17:36:28] -rw-r--r-- 1 boincer umatlas       105 Oct 13 16:21 job.xml
[2025-10-13 17:36:28] -rw-r--r-- 2 boincer umatlas 222685196 Oct 13 16:21 EVNT.46676267._003525.pool.root.1
[2025-10-13 17:36:28] -rw-r--r-- 2 boincer umatlas    569682 Oct 13 16:21 input.tar.gz
[2025-10-13 17:36:28] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 16:21 start_atlas.sh
[2025-10-13 17:36:28] drwxrwx--x 2 boincer umatlas      4096 Oct 13 16:21 shared
[2025-10-13 17:36:28] -rw-r--r-- 1 boincer umatlas         0 Oct 13 16:21 boinc_lockfile
[2025-10-13 17:36:28] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 16:21 pandaJob.out
[2025-10-13 17:36:28] -rw------- 1 boincer umatlas    972799 Oct 13 16:22 agis_schedconf.cvmfs.json
[2025-10-13 17:36:28] -rw------- 1 boincer umatlas   1560580 Oct 13 16:22 agis_ddmendpoints.agis.ALL.json
[2025-10-13 17:36:28] drwx------ 5 boincer umatlas      4096 Oct 13 16:22 pilot3
[2025-10-13 17:36:28] -rw-r--r-- 1 boincer umatlas      5951 Oct 13 17:30 init_data.xml
[2025-10-13 17:36:28] -rw------- 1 boincer umatlas 200819892 Oct 13 17:35 HITS.46676269._074069.pool.root.1
[2025-10-13 17:36:28] -rw-r--r-- 1 boincer umatlas       529 Oct 13 17:35 boinc_task_state.xml
[2025-10-13 17:36:28] -rw------- 1 boincer umatlas      1045 Oct 13 17:35 memory_monitor_summary.json
[2025-10-13 17:36:28] -rw------- 1 boincer umatlas    373979 Oct 13 17:35 log.46676269._074069.job.log.tgz.1
[2025-10-13 17:36:28] -rw------- 1 boincer umatlas      7851 Oct 13 17:35 heartbeat.json
[2025-10-13 17:36:28] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 17:36 boinc_mmap_file
[2025-10-13 17:36:28] -rw-r--r-- 1 boincer umatlas        27 Oct 13 17:36 wrapper_checkpoint.txt
[2025-10-13 17:36:28] -rw------- 1 boincer umatlas        95 Oct 13 17:36 pilot_heartbeat.json
[2025-10-13 17:36:28] -rw------- 1 boincer umatlas       744 Oct 13 17:36 pilotlog.txt
[2025-10-13 17:36:28] -rw------- 1 boincer umatlas    642843 Oct 13 17:36 log.46676269._074069.job.log.1
[2025-10-13 17:36:28] -rw------- 1 boincer umatlas       357 Oct 13 17:36 output.list
[2025-10-13 17:36:28] -rw-r--r-- 1 boincer umatlas       620 Oct 13 17:36 runtime_log
[2025-10-13 17:36:28] -rw------- 1 boincer umatlas   1034240 Oct 13 17:36 result.tar.gz
[2025-10-13 17:36:28] -rw-r--r-- 1 boincer umatlas      8700 Oct 13 17:36 runtime_log.err
[2025-10-13 17:36:28] -rw------- 1 boincer umatlas       658 Oct 13 17:36 Kt5NDmk85R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmz6iNDmQ7jZdm.diag
[2025-10-13 17:36:28] -rw-r--r-- 1 boincer umatlas     21858 Oct 13 17:36 stderr.txt
[2025-10-13 17:36:28] HITS file was successfully produced:
[2025-10-13 17:36:28] -rw------- 1 boincer umatlas 200819892 Oct 13 17:35 shared/HITS.pool.root.1
[2025-10-13 17:36:28]  *** Contents of shared directory: ***
[2025-10-13 17:36:28] total 415172
[2025-10-13 17:36:28] -rw-r--r-- 2 boincer umatlas 222685196 Oct 13 16:21 ATLAS.root_0
[2025-10-13 17:36:28] -rw-r--r-- 2 boincer umatlas    569682 Oct 13 16:21 input.tar.gz
[2025-10-13 17:36:28] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 16:21 start_atlas.sh
[2025-10-13 17:36:28] -rw------- 1 boincer umatlas 200819892 Oct 13 17:35 HITS.pool.root.1
[2025-10-13 17:36:28] -rw------- 1 boincer umatlas   1034240 Oct 13 17:36 result.tar.gz
17:36:29 (4526): run_atlas exited; CPU time 47499.543525
17:36:29 (4526): called boinc_finish(0)

</stderr_txt>
]]>

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