Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:05:04 (3644): wrapper (7.7.26015): starting
16:05:04 (3644): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 16:05:04] Arguments: --nthreads 8
[2025-10-13 16:05:04] Threads: 8
[2025-10-13 16:05:04] Checking for CVMFS
[2025-10-13 16:05:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 16:05:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 16:05:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 16:05:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 16:05:04] 2.11.2.0 8318 54846 113780 151671 3 1 10231452 18432000 1 130560 0 50226612 99.974 2579868 38891 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 16:05:04] CVMFS is ok
[2025-10-13 16:05:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 16:05:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 16:05:04] Further information can be found at the LHC@home message board.
[2025-10-13 16:05:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 16:05:04] Checking for apptainer binary...
[2025-10-13 16:05:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 16:05:04] Running /usr/bin/apptainer --version
[2025-10-13 16:05:04] apptainer version 1.3.2-1.el7
[2025-10-13 16:05:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 16:05:06] c-206-28.aglt2.org
[2025-10-13 16:05:06] apptainer works
[2025-10-13 16:05:06] Set ATHENA_PROC_NUMBER=8
[2025-10-13 16:05:06] Set ATHENA_CORE_NUMBER=8
[2025-10-13 16:05:06] Starting ATLAS job with PandaID=6842761337
[2025-10-13 16:05:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 17:50:35]  *** The last 200 lines of the pilot log: ***
[2025-10-13 17:50:35] 2025-10-13 21:49:37,510 | INFO     | chi2: 1.3455055516730086
[2025-10-13 17:50:35] 2025-10-13 21:49:37,510 | INFO     | current chi2=1.3455055516730086 (change=-0.23230580045297397 %)
[2025-10-13 17:50:35] 2025-10-13 21:49:37,510 | INFO     | right removable region: 96
[2025-10-13 17:50:35] 2025-10-13 21:49:37,510 | INFO     | sum of square deviations: 282974608.0
[2025-10-13 17:50:35] 2025-10-13 21:49:37,511 | INFO     | sum of deviations: -2628819156.000001
[2025-10-13 17:50:35] 2025-10-13 21:49:37,511 | INFO     | mean x: 1760389184.0
[2025-10-13 17:50:35] 2025-10-13 21:49:37,511 | INFO     | mean y: 2517458.443298969
[2025-10-13 17:50:35] 2025-10-13 21:49:37,511 | INFO     | -- intersect: 16356439959.201424
[2025-10-13 17:50:35] 2025-10-13 21:49:37,511 | INFO     | intersect: 16356439959.201424
[2025-10-13 17:50:35] 2025-10-13 21:49:37,511 | INFO     | chi2: 0.043101739023751307
[2025-10-13 17:50:35] 2025-10-13 21:49:37,512 | INFO     | current chi2=0.043101739023751307 (change=96.78917215838446 %)
[2025-10-13 17:50:35] 2025-10-13 21:49:37,512 | INFO     | sum of square deviations: 241429643.0
[2025-10-13 17:50:35] 2025-10-13 21:49:37,512 | INFO     | sum of deviations: 434461398.0000001
[2025-10-13 17:50:35] 2025-10-13 21:49:37,512 | INFO     | mean x: 1760389336.5
[2025-10-13 17:50:35] 2025-10-13 21:49:37,512 | INFO     | mean y: 2506166.695652174
[2025-10-13 17:50:35] 2025-10-13 21:49:37,512 | INFO     | -- intersect: -3165378284.67672
[2025-10-13 17:50:35] 2025-10-13 21:49:37,513 | INFO     | intersect: -3165378284.67672
[2025-10-13 17:50:35] 2025-10-13 21:49:37,513 | INFO     | chi2: 0.01140445964887028
[2025-10-13 17:50:35] 2025-10-13 21:49:37,513 | INFO     | current chi2=0.01140445964887028 (change=73.54060437657554 %)
[2025-10-13 17:50:35] 2025-10-13 21:49:37,513 | INFO     | sum of square deviations: 204163828.0
[2025-10-13 17:50:35] 2025-10-13 21:49:37,513 | INFO     | sum of deviations: 695681088.0000002
[2025-10-13 17:50:35] 2025-10-13 21:49:37,514 | INFO     | mean x: 1760389489.0
[2025-10-13 17:50:35] 2025-10-13 21:49:37,514 | INFO     | mean y: 2505232.908045977
[2025-10-13 17:50:35] 2025-10-13 21:49:37,514 | INFO     | -- intersect: -5995960249.485263
[2025-10-13 17:50:35] 2025-10-13 21:49:37,514 | INFO     | intersect: -5995960249.485263
[2025-10-13 17:50:35] 2025-10-13 21:49:37,514 | INFO     | chi2: 4.626289540144159e-05
[2025-10-13 17:50:35] 2025-10-13 21:49:37,514 | INFO     | current chi2=4.626289540144159e-05 (change=99.59434381964756 %)
[2025-10-13 17:50:35] 2025-10-13 21:49:37,515 | INFO     | sum of square deviations: 170944600.5
[2025-10-13 17:50:35] 2025-10-13 21:49:37,515 | INFO     | sum of deviations: 534822257.9999999
[2025-10-13 17:50:35] 2025-10-13 21:49:37,515 | INFO     | mean x: 1760389641.5
[2025-10-13 17:50:35] 2025-10-13 21:49:37,515 | INFO     | mean y: 2505962.512195122
[2025-10-13 17:50:35] 2025-10-13 21:49:37,515 | INFO     | -- intersect: -5505100363.0051775
[2025-10-13 17:50:35] 2025-10-13 21:49:37,515 | INFO     | intersect: -5505100363.0051775
[2025-10-13 17:50:35] 2025-10-13 21:49:37,516 | INFO     | chi2: 1.6018559312129046e-05
[2025-10-13 17:50:35] 2025-10-13 21:49:37,516 | INFO     | current chi2=1.6018559312129046e-05 (change=65.3749313069802 %)
[2025-10-13 17:50:35] 2025-10-13 21:49:37,516 | INFO     | sum of square deviations: 141539398.0
[2025-10-13 17:50:35] 2025-10-13 21:49:37,516 | INFO     | sum of deviations: 444374020.0
[2025-10-13 17:50:35] 2025-10-13 21:49:37,516 | INFO     | mean x: 1760389794.0
[2025-10-13 17:50:35] 2025-10-13 21:49:37,516 | INFO     | mean y: 2506431.649350649
[2025-10-13 17:50:35] 2025-10-13 21:49:37,517 | INFO     | -- intersect: -5524375133.346085
[2025-10-13 17:50:35] 2025-10-13 21:49:37,517 | INFO     | intersect: -5524375133.346085
[2025-10-13 17:50:35] 2025-10-13 21:49:37,517 | INFO     | chi2: 1.598954838101479e-05
[2025-10-13 17:50:35] 2025-10-13 21:49:37,517 | INFO     | current chi2=1.598954838101479e-05 (change=0.18110824168992984 %)
[2025-10-13 17:50:35] 2025-10-13 21:49:37,517 | INFO     | left removable region: 50
[2025-10-13 17:50:35] 2025-10-13 21:49:37,517 | INFO     | sum of square deviations: 30168007.5
[2025-10-13 17:50:35] 2025-10-13 21:49:37,517 | INFO     | sum of deviations: 95769268.0
[2025-10-13 17:50:35] 2025-10-13 21:49:37,518 | INFO     | mean x: 1760390373.5
[2025-10-13 17:50:35] 2025-10-13 21:49:37,518 | INFO     | mean y: 2508567.086956522
[2025-10-13 17:50:35] 2025-10-13 21:49:37,518 | INFO     | -- intersect: -5585904836.229175
[2025-10-13 17:50:35] 2025-10-13 21:49:37,518 | INFO     | intersect: -5585904836.229175
[2025-10-13 17:50:35] 2025-10-13 21:49:37,518 | INFO     | chi2: 9.91448611160944e-06
[2025-10-13 17:50:35] 2025-10-13 21:49:37,518 | INFO     | -- intersect: -5585904836.229175
[2025-10-13 17:50:35] 2025-10-13 21:49:37,518 | INFO     | current memory leak: 3.17 B/s (using 46 data points, chi2=0.00)
[2025-10-13 17:50:35] 2025-10-13 21:49:37,519 | INFO     | could have reported an average CPU frequency of 1821 MHz (7 samples)
[2025-10-13 17:50:35] 2025-10-13 21:49:37,519 | INFO     | ..............................
[2025-10-13 17:50:35] 2025-10-13 21:49:37,519 | INFO     | . Timing measurements:
[2025-10-13 17:50:35] 2025-10-13 21:49:37,519 | INFO     | . get job = 0 s
[2025-10-13 17:50:35] 2025-10-13 21:49:37,519 | INFO     | . initial setup = 2 s
[2025-10-13 17:50:35] 2025-10-13 21:49:37,519 | INFO     | . payload setup = 7 s
[2025-10-13 17:50:35] 2025-10-13 21:49:37,519 | INFO     | . stage-in = 0 s
[2025-10-13 17:50:35] 2025-10-13 21:49:37,519 | INFO     | . payload execution = 6217 s
[2025-10-13 17:50:35] 2025-10-13 21:49:37,520 | INFO     | . stage-out = 0 s
[2025-10-13 17:50:35] 2025-10-13 21:49:37,520 | INFO     | . log creation = 0 s
[2025-10-13 17:50:35] 2025-10-13 21:49:37,520 | INFO     | ..............................
[2025-10-13 17:50:35] 2025-10-13 21:49:37,997 | INFO     | 
[2025-10-13 17:50:35] 2025-10-13 21:49:37,997 | INFO     | job summary report
[2025-10-13 17:50:35] 2025-10-13 21:49:37,997 | INFO     | --------------------------------------------------
[2025-10-13 17:50:35] 2025-10-13 21:49:37,997 | INFO     | PanDA job id: 6842761337
[2025-10-13 17:50:35] 2025-10-13 21:49:37,998 | INFO     | task id: 46676269
[2025-10-13 17:50:35] 2025-10-13 21:49:37,998 | INFO     | errors: (none)
[2025-10-13 17:50:35] 2025-10-13 21:49:37,998 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 17:50:35] 2025-10-13 21:49:37,998 | INFO     | pilot state: finished 
[2025-10-13 17:50:35] 2025-10-13 21:49:37,998 | INFO     | transexitcode: 0
[2025-10-13 17:50:35] 2025-10-13 21:49:37,998 | INFO     | exeerrorcode: 0
[2025-10-13 17:50:35] 2025-10-13 21:49:37,999 | INFO     | exeerrordiag: 
[2025-10-13 17:50:35] 2025-10-13 21:49:37,999 | INFO     | exitcode: 0
[2025-10-13 17:50:35] 2025-10-13 21:49:37,999 | INFO     | exitmsg: OK
[2025-10-13 17:50:35] 2025-10-13 21:49:37,999 | INFO     | cpuconsumptiontime: 46916 s
[2025-10-13 17:50:35] 2025-10-13 21:49:37,999 | INFO     | nevents: 400
[2025-10-13 17:50:35] 2025-10-13 21:49:37,999 | INFO     | neventsw: 0
[2025-10-13 17:50:35] 2025-10-13 21:49:37,999 | INFO     | pid: 14232
[2025-10-13 17:50:35] 2025-10-13 21:49:38,000 | INFO     | pgrp: 14232
[2025-10-13 17:50:35] 2025-10-13 21:49:38,000 | INFO     | corecount: 8
[2025-10-13 17:50:35] 2025-10-13 21:49:38,000 | INFO     | event service: False
[2025-10-13 17:50:35] 2025-10-13 21:49:38,000 | INFO     | sizes: {0: 2348806, 1: 2348806, 5: 2349096, 11: 2349152, 6228: 2376150, 6229: 2385148, 6231: 2385332, 6240: 2385526}
[2025-10-13 17:50:35] 2025-10-13 21:49:38,000 | INFO     | --------------------------------------------------
[2025-10-13 17:50:35] 2025-10-13 21:49:38,000 | INFO     | 
[2025-10-13 17:50:35] 2025-10-13 21:49:38,001 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 17:50:35] 2025-10-13 21:49:38,026 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 17:50:35] 2025-10-13 21:49:38,026 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 17:50:35] 2025-10-13 21:49:38,026 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 17:50:35] 2025-10-13 21:49:38,026 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 17:50:35] 2025-10-13 21:49:38,027 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 17:50:35] 2025-10-13 21:49:38,027 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 17:50:35] 2025-10-13 21:49:38,027 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 17:50:35] 2025-10-13 21:49:38,027 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 17:50:35] 2025-10-13 21:49:38,027 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 17:50:35] 2025-10-13 21:49:38,027 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 17:50:35] 2025-10-13 21:49:38,028 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 17:50:35] 2025-10-13 21:49:38,028 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 17:50:35] 2025-10-13 21:49:38,028 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 17:50:35] 2025-10-13 21:49:38,028 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 17:50:35] 2025-10-13 21:49:38,028 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 17:50:35] 2025-10-13 21:49:38,028 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 17:50:35] 2025-10-13 21:49:38,029 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 17:50:35] 2025-10-13 21:49:38,029 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 17:50:35] 2025-10-13 21:49:38,029 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 17:50:35] 2025-10-13 21:49:38,029 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 17:50:35] 2025-10-13 21:49:38,029 | INFO     | job 6842761337 has completed (purged errors)
[2025-10-13 17:50:35] 2025-10-13 21:49:38,030 | INFO     | overall cleanup function is called
[2025-10-13 17:50:35] 2025-10-13 21:49:39,037 | INFO     | --- collectZombieJob: --- 10, [14232]
[2025-10-13 17:50:35] 2025-10-13 21:49:39,038 | INFO     | zombie collector waiting for pid 14232
[2025-10-13 17:50:35] 2025-10-13 21:49:39,038 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 17:50:35] 2025-10-13 21:49:39,038 | INFO     | collected zombie processes
[2025-10-13 17:50:35] 2025-10-13 21:49:39,038 | INFO     | will attempt to kill all subprocesses of pid=14232
[2025-10-13 17:50:35] 2025-10-13 21:49:39,132 | INFO     | process IDs to be killed: [14232] (in reverse order)
[2025-10-13 17:50:35] 2025-10-13 21:49:39,182 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 17:50:35] 2025-10-13 21:49:39,183 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 17:50:35] 2025-10-13 21:49:39,187 | INFO     | did not find any defunct processes belonging to 14232
[2025-10-13 17:50:35] 2025-10-13 21:49:39,190 | INFO     | did not find any defunct processes belonging to 14232
[2025-10-13 17:50:35] 2025-10-13 21:49:39,190 | INFO     | ready for new job
[2025-10-13 17:50:35] 2025-10-13 21:49:39,191 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 17:50:35] 2025-10-13 21:49:39,192 | INFO     | ***************************************
[2025-10-13 17:50:35] 2025-10-13 21:49:39,192 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 17:50:35] 2025-10-13 21:49:39,192 | INFO     | ***************************************
[2025-10-13 17:50:35] 2025-10-13 21:49:39,193 | INFO     | 
[2025-10-13 17:50:35] 2025-10-13 21:49:39,193 | INFO     | architecture information:
[2025-10-13 17:50:35] 2025-10-13 21:49:39,194 | INFO     | executing command: cat /etc/os-release
[2025-10-13 17:50:35] 2025-10-13 21:49:39,209 | INFO     | cat /etc/os-release:
[2025-10-13 17:50:35] NAME="CentOS Linux"
[2025-10-13 17:50:35] VERSION="7 (Core)"
[2025-10-13 17:50:35] ID="centos"
[2025-10-13 17:50:35] ID_LIKE="rhel fedora"
[2025-10-13 17:50:35] VERSION_ID="7"
[2025-10-13 17:50:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 17:50:35] ANSI_COLOR="0;31"
[2025-10-13 17:50:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 17:50:35] HOME_URL="https://www.centos.org/"
[2025-10-13 17:50:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 17:50:35] 
[2025-10-13 17:50:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 17:50:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 17:50:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 17:50:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 17:50:35] 
[2025-10-13 17:50:35] 2025-10-13 21:49:39,209 | INFO     | ***************************************
[2025-10-13 17:50:35] 2025-10-13 21:49:39,712 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 17:50:35] 2025-10-13 21:49:39,729 | INFO     | sufficient remaining disk space (29186064384 B)
[2025-10-13 17:50:35] 2025-10-13 21:49:39,729 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 17:50:35] 2025-10-13 21:49:39,729 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 17:50:35] 2025-10-13 21:49:39,729 | INFO     | update_server=False
[2025-10-13 17:50:35] 2025-10-13 21:49:39,730 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 17:50:35] 2025-10-13 21:49:39,730 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 17:50:35] 2025-10-13 21:49:39,730 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 17:50:35] 2025-10-13 21:49:39,731 | INFO     | aborting loop
[2025-10-13 17:50:35] 2025-10-13 21:49:39,822 | INFO     | all data control threads have been joined
[2025-10-13 17:50:35] 2025-10-13 21:49:40,405 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 17:50:35] 2025-10-13 21:49:40,583 | INFO     | all job control threads have been joined
[2025-10-13 17:50:35] 2025-10-13 21:49:40,733 | INFO     | all payload control threads have been joined
[2025-10-13 17:50:35] 2025-10-13 21:49:40,735 | INFO     | [job] retrieve thread has finished
[2025-10-13 17:50:35] 2025-10-13 21:49:40,736 | INFO     | [job] job monitor thread has finished
[2025-10-13 17:50:35] 2025-10-13 21:49:40,744 | INFO     | [job] validate thread has finished
[2025-10-13 17:50:35] 2025-10-13 21:49:40,827 | INFO     | [data] control thread has finished
[2025-10-13 17:50:35] 2025-10-13 21:49:41,039 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 17:50:35] 2025-10-13 21:49:41,059 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 17:50:35] 2025-10-13 21:49:41,213 | INFO     | [payload] validate_post thread has finished
[2025-10-13 17:50:35] 2025-10-13 21:49:41,588 | INFO     | [job] control thread has finished
[2025-10-13 17:50:35] 2025-10-13 21:49:41,721 | INFO     | [data] copytool_in thread has finished
[2025-10-13 17:50:35] 2025-10-13 21:49:41,739 | INFO     | [payload] control thread has finished
[2025-10-13 17:50:35] 2025-10-13 21:49:41,746 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 17:50:35] 2025-10-13 21:49:41,975 | INFO     | [payload] failed_post thread has finished
[2025-10-13 17:50:35] 2025-10-13 21:49:42,411 | INFO     | [data] copytool_out thread has finished
[2025-10-13 17:50:35] 2025-10-13 21:49:42,612 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 17:50:35] 2025-10-13 21:49:43,617 | INFO     | [job] queue monitor thread has finished
[2025-10-13 17:50:35] 2025-10-13 21:49:43,736 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 17:50:35] 2025-10-13 21:49:50,443 | INFO     | job.realtimelogging is not enabled
[2025-10-13 17:50:35] 2025-10-13 21:49:51,448 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 17:50:35] 2025-10-13 21:50:09,398 | INFO     | PID=7812 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 17:50:35] 2025-10-13 21:50:09,399 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 17:50:35] 2025-10-13 21:50:09,399 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 17:50:35] 2025-10-13 21:50:09,399 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 17:50:35] 2025-10-13 21:50:18,131 [wrapper] supervise_pilot (15 min periods counter: 8)
[2025-10-13 17:50:35] 2025-10-13 21:50:29,019 | INFO     | [monitor] cgroup control has ended
[2025-10-13 17:50:35] 2025-10-13 21:50:30,405 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139649415485248)>', '<ExcThread(monitor, started 139648227596032)>']
[2025-10-13 17:50:35] 2025-10-13 21:50:30,494 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 17:50:35] 2025-10-13 21:50:30,494 | INFO     | [monitor] control thread has ended
[2025-10-13 17:50:35] 2025-10-13 21:50:35,430 | INFO     | all workflow threads have been joined
[2025-10-13 17:50:35] 2025-10-13 21:50:35,431 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 17:50:35] 2025-10-13 21:50:35,431 | INFO     | traces error code: 0
[2025-10-13 17:50:35] 2025-10-13 21:50:35,431 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 17:50:35] 2025-10-13 21:50:35,515 [wrapper] ==== pilot stdout END ====
[2025-10-13 17:50:35] 2025-10-13 21:50:35,519 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 17:50:35] 2025-10-13 21:50:35,523 [wrapper] pilotpid: 7812
[2025-10-13 17:50:35] 2025-10-13 21:50:35,527 [wrapper] Pilot exit status: 0
[2025-10-13 17:50:35] 2025-10-13 21:50:35,541 [wrapper] pandaids: 6842761337
[2025-10-13 17:50:35] 2025-10-13 21:50:35,585 [wrapper] cleanup supervisor_pilot 26027 7813
[2025-10-13 17:50:35] 2025-10-13 21:50:35,589 [wrapper] Test setup, not cleaning
[2025-10-13 17:50:35] 2025-10-13 21:50:35,593 [wrapper] apfmon messages muted
[2025-10-13 17:50:35] 2025-10-13 21:50:35,597 [wrapper] ==== wrapper stdout END ====
[2025-10-13 17:50:35] 2025-10-13 21:50:35,601 [wrapper] ==== wrapper stderr END ====
[2025-10-13 17:50:35]  *** Error codes and diagnostics ***
[2025-10-13 17:50:35]     "exeErrorCode": 0,
[2025-10-13 17:50:35]     "exeErrorDiag": "",
[2025-10-13 17:50:35]     "pilotErrorCode": 0,
[2025-10-13 17:50:35]     "pilotErrorDiag": "",
[2025-10-13 17:50:35]  *** Listing of results directory ***
[2025-10-13 17:50:35] total 411580
[2025-10-13 17:50:35] -rw-r--r-- 1 boincer umatlas    557409 Oct 13 05:05 pilot3.tar.gz
[2025-10-13 17:50:35] -rwx------ 1 boincer umatlas     36292 Oct 13 05:21 runpilot2-wrapper.sh
[2025-10-13 17:50:35] -rw-r--r-- 1 boincer umatlas      5112 Oct 13 05:21 queuedata.json
[2025-10-13 17:50:35] -rw-r--r-- 1 boincer umatlas       100 Oct 13 16:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 17:50:35] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 16:05 run_atlas
[2025-10-13 17:50:35] -rw-r--r-- 1 boincer umatlas       105 Oct 13 16:05 job.xml
[2025-10-13 17:50:35] -rw-r--r-- 2 boincer umatlas 219891211 Oct 13 16:05 EVNT.46676267._004666.pool.root.1
[2025-10-13 17:50:35] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 16:05 start_atlas.sh
[2025-10-13 17:50:35] drwxrwx--x 2 boincer umatlas      4096 Oct 13 16:05 shared
[2025-10-13 17:50:35] -rw-r--r-- 2 boincer umatlas    569683 Oct 13 16:05 input.tar.gz
[2025-10-13 17:50:35] -rw-r--r-- 1 boincer umatlas         0 Oct 13 16:05 boinc_lockfile
[2025-10-13 17:50:35] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 16:05 pandaJob.out
[2025-10-13 17:50:35] -rw------- 1 boincer umatlas    972799 Oct 13 16:05 agis_schedconf.cvmfs.json
[2025-10-13 17:50:35] -rw------- 1 boincer umatlas   1560580 Oct 13 16:05 agis_ddmendpoints.agis.ALL.json
[2025-10-13 17:50:35] drwx------ 5 boincer umatlas      4096 Oct 13 16:05 pilot3
[2025-10-13 17:50:35] -rw-r--r-- 1 boincer umatlas      5951 Oct 13 17:48 init_data.xml
[2025-10-13 17:50:35] -rw------- 1 boincer umatlas 195185178 Oct 13 17:48 HITS.46676269._096559.pool.root.1
[2025-10-13 17:50:35] -rw-r--r-- 1 boincer umatlas       529 Oct 13 17:49 boinc_task_state.xml
[2025-10-13 17:50:35] -rw------- 1 boincer umatlas      1047 Oct 13 17:49 memory_monitor_summary.json
[2025-10-13 17:50:35] -rw------- 1 boincer umatlas    339123 Oct 13 17:49 log.46676269._096559.job.log.tgz.1
[2025-10-13 17:50:35] -rw------- 1 boincer umatlas      7846 Oct 13 17:49 heartbeat.json
[2025-10-13 17:50:35] -rw------- 1 boincer umatlas        95 Oct 13 17:50 pilot_heartbeat.json
[2025-10-13 17:50:35] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 17:50 boinc_mmap_file
[2025-10-13 17:50:35] -rw-r--r-- 1 boincer umatlas        27 Oct 13 17:50 wrapper_checkpoint.txt
[2025-10-13 17:50:35] -rw------- 1 boincer umatlas      4817 Oct 13 17:50 pilotlog.txt
[2025-10-13 17:50:35] -rw------- 1 boincer umatlas    900325 Oct 13 17:50 log.46676269._096559.job.log.1
[2025-10-13 17:50:35] -rw------- 1 boincer umatlas       357 Oct 13 17:50 output.list
[2025-10-13 17:50:35] -rw-r--r-- 1 boincer umatlas       620 Oct 13 17:50 runtime_log
[2025-10-13 17:50:35] -rw------- 1 boincer umatlas   1259520 Oct 13 17:50 result.tar.gz
[2025-10-13 17:50:35] -rw------- 1 boincer umatlas       659 Oct 13 17:50 vi0MDmOvTS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEkmNDmmqXxwn.diag
[2025-10-13 17:50:35] -rw-r--r-- 1 boincer umatlas      8703 Oct 13 17:50 runtime_log.err
[2025-10-13 17:50:35] -rw-r--r-- 1 boincer umatlas     20908 Oct 13 17:50 stderr.txt
[2025-10-13 17:50:35] HITS file was successfully produced:
[2025-10-13 17:50:35] -rw------- 1 boincer umatlas 195185178 Oct 13 17:48 shared/HITS.pool.root.1
[2025-10-13 17:50:35]  *** Contents of shared directory: ***
[2025-10-13 17:50:35] total 407168
[2025-10-13 17:50:35] -rw-r--r-- 2 boincer umatlas 219891211 Oct 13 16:05 ATLAS.root_0
[2025-10-13 17:50:35] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 16:05 start_atlas.sh
[2025-10-13 17:50:35] -rw-r--r-- 2 boincer umatlas    569683 Oct 13 16:05 input.tar.gz
[2025-10-13 17:50:35] -rw------- 1 boincer umatlas 195185178 Oct 13 17:48 HITS.pool.root.1
[2025-10-13 17:50:35] -rw------- 1 boincer umatlas   1259520 Oct 13 17:50 result.tar.gz
17:50:37 (3644): run_atlas exited; CPU time 46726.610140
17:50:37 (3644): called boinc_finish(0)

</stderr_txt>
]]>

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