Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:53:50 (2804216): wrapper (7.7.26015): starting
15:53:50 (2804216): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 15:53:50] Arguments: --nthreads 9
[2025-10-13 15:53:50] Threads: 9
[2025-10-13 15:53:50] Checking for CVMFS
[2025-10-13 15:53:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 15:53:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 15:53:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 15:53:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 15:53:50] 2.13.2.0 2956151 131130 435408 151671 3 491 24201772 32935937 43534 16776704 0 889106419 99.727 619407821 32925 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 15:53:50] CVMFS is ok
[2025-10-13 15:53:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 15:53:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 15:53:50] Further information can be found at the LHC@home message board.
[2025-10-13 15:53:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 15:53:50] Checking for apptainer binary...
[2025-10-13 15:53:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 15:53:50] Running /usr/bin/apptainer --version
[2025-10-13 15:53:50] apptainer version 1.4.3-1.el9
[2025-10-13 15:53:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 15:53:50] c7-9-15.aglt2.org
[2025-10-13 15:53:50] apptainer works
[2025-10-13 15:53:50] Set ATHENA_PROC_NUMBER=9
[2025-10-13 15:53:50] Set ATHENA_CORE_NUMBER=9
[2025-10-13 15:53:50] Starting ATLAS job with PandaID=6831775384
[2025-10-13 15:53:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 16:46:14]  *** The last 200 lines of the pilot log: ***
[2025-10-13 16:46:14]  protocol_id=None
[2025-10-13 16:46:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 16:46:14]  replicas=None
[2025-10-13 16:46:14]  scope=mc23_13p6TeV
[2025-10-13 16:46:14]  status=None
[2025-10-13 16:46:14]  status_code=0
[2025-10-13 16:46:14]  storage_token=
[2025-10-13 16:46:14]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6831775384/log.46376905._090325.job.log.tgz.1
[2025-10-13 16:46:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8f/12/log.46376905._090325.job.log.tgz.1
[2025-10-13 16:46:14]  workdir=None
[2025-10-13 16:46:14] ]
[2025-10-13 16:46:14] 2025-10-13 20:45:32,810 | INFO     | transferring file log.46376905._090325.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6831775384/log.46376905._090325.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 16:46:14] 2025-10-13 20:45:32,811 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6831775384/log.46376905._090325.job.log.tgz.1 /tmp/boinchome/slots/0/log.46376905._090325.job
[2025-10-13 16:46:14] 2025-10-13 20:45:32,827 | INFO     | adding to output.list: log.46376905._090325.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8f/12/log.46376905._090325.job.log.tg
[2025-10-13 16:46:14] 2025-10-13 20:45:32,827 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 16:46:14] 2025-10-13 20:45:32,827 | INFO     | summary of transferred files:
[2025-10-13 16:46:14] 2025-10-13 20:45:32,828 | INFO     |  -- lfn=log.46376905._090325.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 16:46:14] 2025-10-13 20:45:32,828 | INFO     | stage-out finished correctly
[2025-10-13 16:46:14] 2025-10-13 20:45:32,875 | INFO     | time since job start (3089s) is within the limit (172800.0s)
[2025-10-13 16:46:14] 2025-10-13 20:45:32,879 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 16:46:14] 2025-10-13 20:45:32,930 | INFO     | job 6831775384 has state=finished
[2025-10-13 16:46:14] 2025-10-13 20:45:32,931 | INFO     | preparing for final server update for job 6831775384 in state='finished'
[2025-10-13 16:46:14] 2025-10-13 20:45:32,931 | INFO     | this job has now completed (state=finished)
[2025-10-13 16:46:14] 2025-10-13 20:45:32,931 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 16:46:14] 2025-10-13 20:45:32,931 | INFO     | log transfer has been attempted: DONE
[2025-10-13 16:46:14] 2025-10-13 20:45:32,931 | INFO     | job 6831775384 has finished - writing final server update
[2025-10-13 16:46:14] 2025-10-13 20:45:32,932 | INFO     | total number of processed events: 400 (read)
[2025-10-13 16:46:14] 2025-10-13 20:45:32,932 | INFO     | executing command: lscpu
[2025-10-13 16:46:14] 2025-10-13 20:45:32,995 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 16:46:14] 2025-10-13 20:45:34,884 | INFO     | time since job start (3091s) is within the limit (172800.0s)
[2025-10-13 16:46:14] 2025-10-13 20:45:36,508 | WARNING  | process 2815149 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 16:46:14] 2025-10-13 20:45:36,508 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6831775384/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 16:46:14] 2025-10-13 20:45:36,851 | INFO     | number of running child processes to parent process 2815149: 1
[2025-10-13 16:46:14] 2025-10-13 20:45:36,851 | INFO     | maximum number of monitored processes: 6
[2025-10-13 16:46:14] 2025-10-13 20:45:36,890 | INFO     | time since job start (3093s) is within the limit (172800.0s)
[2025-10-13 16:46:14] 2025-10-13 20:45:37,297 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 16:46:14] 2025-10-13 20:45:37,301 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3744.9880624999987
[2025-10-13 16:46:14] 2025-10-13 20:45:37,313 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6831775384/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 16:46:14] 2025-10-13 20:45:37,313 | INFO     | extracted standard info from prmon json
[2025-10-13 16:46:14] 2025-10-13 20:45:37,314 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 16:46:14] 2025-10-13 20:45:37,314 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 16:46:14] 2025-10-13 20:45:37,314 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 16:46:14] 2025-10-13 20:45:37,314 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 16:46:14] 2025-10-13 20:45:37,315 | INFO     | fitting pss+swap vs Time
[2025-10-13 16:46:14] 2025-10-13 20:45:37,315 | INFO     | sum of square deviations: 26400495.0
[2025-10-13 16:46:14] 2025-10-13 20:45:37,315 | INFO     | sum of deviations: -5321501621.500001
[2025-10-13 16:46:14] 2025-10-13 20:45:37,315 | INFO     | mean x: 1760386889.5
[2025-10-13 16:46:14] 2025-10-13 20:45:37,315 | INFO     | mean y: 2442146.6136363638
[2025-10-13 16:46:14] 2025-10-13 20:45:37,315 | INFO     | -- intersect: 354840549801.09485
[2025-10-13 16:46:14] 2025-10-13 20:45:37,315 | INFO     | intersect: 354840549801.09485
[2025-10-13 16:46:14] 2025-10-13 20:45:37,315 | INFO     | chi2: 0.10446309764192646
[2025-10-13 16:46:14] 2025-10-13 20:45:37,315 | INFO     | -- intersect: 354840549801.09485
[2025-10-13 16:46:14] 2025-10-13 20:45:37,315 | INFO     | current memory leak: -201.57 B/s (using 44 data points, chi2=0.10)
[2025-10-13 16:46:14] 2025-10-13 20:45:37,315 | INFO     | could have reported an average CPU frequency of 3760 MHz (5 samples)
[2025-10-13 16:46:14] 2025-10-13 20:45:37,316 | INFO     | ..............................
[2025-10-13 16:46:14] 2025-10-13 20:45:37,316 | INFO     | . Timing measurements:
[2025-10-13 16:46:14] 2025-10-13 20:45:37,316 | INFO     | . get job = 0 s
[2025-10-13 16:46:14] 2025-10-13 20:45:37,316 | INFO     | . initial setup = 2 s
[2025-10-13 16:46:14] 2025-10-13 20:45:37,316 | INFO     | . payload setup = 8 s
[2025-10-13 16:46:14] 2025-10-13 20:45:37,316 | INFO     | . stage-in = 0 s
[2025-10-13 16:46:14] 2025-10-13 20:45:37,316 | INFO     | . payload execution = 3060 s
[2025-10-13 16:46:14] 2025-10-13 20:45:37,316 | INFO     | . stage-out = 0 s
[2025-10-13 16:46:14] 2025-10-13 20:45:37,316 | INFO     | . log creation = 0 s
[2025-10-13 16:46:14] 2025-10-13 20:45:37,316 | INFO     | ..............................
[2025-10-13 16:46:14] 2025-10-13 20:45:37,466 | INFO     | 
[2025-10-13 16:46:14] 2025-10-13 20:45:37,466 | INFO     | job summary report
[2025-10-13 16:46:14] 2025-10-13 20:45:37,466 | INFO     | --------------------------------------------------
[2025-10-13 16:46:14] 2025-10-13 20:45:37,466 | INFO     | PanDA job id: 6831775384
[2025-10-13 16:46:14] 2025-10-13 20:45:37,466 | INFO     | task id: 46376905
[2025-10-13 16:46:14] 2025-10-13 20:45:37,466 | INFO     | errors: (none)
[2025-10-13 16:46:14] 2025-10-13 20:45:37,466 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 16:46:14] 2025-10-13 20:45:37,466 | INFO     | pilot state: finished 
[2025-10-13 16:46:14] 2025-10-13 20:45:37,466 | INFO     | transexitcode: 0
[2025-10-13 16:46:14] 2025-10-13 20:45:37,467 | INFO     | exeerrorcode: 0
[2025-10-13 16:46:14] 2025-10-13 20:45:37,467 | INFO     | exeerrordiag: 
[2025-10-13 16:46:14] 2025-10-13 20:45:37,467 | INFO     | exitcode: 0
[2025-10-13 16:46:14] 2025-10-13 20:45:37,467 | INFO     | exitmsg: OK
[2025-10-13 16:46:14] 2025-10-13 20:45:37,467 | INFO     | cpuconsumptiontime: 21423 s
[2025-10-13 16:46:14] 2025-10-13 20:45:37,467 | INFO     | nevents: 400
[2025-10-13 16:46:14] 2025-10-13 20:45:37,467 | INFO     | neventsw: 0
[2025-10-13 16:46:14] 2025-10-13 20:45:37,467 | INFO     | pid: 2815149
[2025-10-13 16:46:14] 2025-10-13 20:45:37,467 | INFO     | pgrp: 2815149
[2025-10-13 16:46:14] 2025-10-13 20:45:37,467 | INFO     | corecount: 9
[2025-10-13 16:46:14] 2025-10-13 20:45:37,467 | INFO     | event service: False
[2025-10-13 16:46:14] 2025-10-13 20:45:37,467 | INFO     | sizes: {0: 2347988, 1: 2348844, 5: 2349106, 11: 2349162, 3072: 2374767, 3074: 2383949, 3078: 2384119}
[2025-10-13 16:46:14] 2025-10-13 20:45:37,467 | INFO     | --------------------------------------------------
[2025-10-13 16:46:14] 2025-10-13 20:45:37,467 | INFO     | 
[2025-10-13 16:46:14] 2025-10-13 20:45:37,467 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 16:46:14] 2025-10-13 20:45:37,482 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 16:46:14] 2025-10-13 20:45:37,482 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 16:46:14] 2025-10-13 20:45:37,482 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 16:46:14] 2025-10-13 20:45:37,482 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 16:46:14] 2025-10-13 20:45:37,482 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 16:46:14] 2025-10-13 20:45:37,483 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 16:46:14] 2025-10-13 20:45:37,483 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 16:46:14] 2025-10-13 20:45:37,483 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 16:46:14] 2025-10-13 20:45:37,483 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 16:46:14] 2025-10-13 20:45:37,483 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 16:46:14] 2025-10-13 20:45:37,483 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 16:46:14] 2025-10-13 20:45:37,483 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 16:46:14] 2025-10-13 20:45:37,483 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 16:46:14] 2025-10-13 20:45:37,483 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 16:46:14] 2025-10-13 20:45:37,483 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 16:46:14] 2025-10-13 20:45:37,483 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 16:46:14] 2025-10-13 20:45:37,483 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 16:46:14] 2025-10-13 20:45:37,483 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 16:46:14] 2025-10-13 20:45:37,483 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 16:46:14] 2025-10-13 20:45:37,483 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 16:46:14] 2025-10-13 20:45:37,483 | INFO     | job 6831775384 has completed (purged errors)
[2025-10-13 16:46:14] 2025-10-13 20:45:37,483 | INFO     | overall cleanup function is called
[2025-10-13 16:46:14] 2025-10-13 20:45:38,492 | INFO     | --- collectZombieJob: --- 10, [2815149]
[2025-10-13 16:46:14] 2025-10-13 20:45:38,494 | INFO     | zombie collector waiting for pid 2815149
[2025-10-13 16:46:14] 2025-10-13 20:45:38,494 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 16:46:14] 2025-10-13 20:45:38,494 | INFO     | collected zombie processes
[2025-10-13 16:46:14] 2025-10-13 20:45:38,494 | INFO     | will attempt to kill all subprocesses of pid=2815149
[2025-10-13 16:46:14] 2025-10-13 20:45:38,840 | INFO     | process IDs to be killed: [2815149] (in reverse order)
[2025-10-13 16:46:14] 2025-10-13 20:45:38,986 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 16:46:14] 2025-10-13 20:45:38,986 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 16:46:14] 2025-10-13 20:45:39,007 | INFO     | did not find any defunct processes belonging to 2815149
[2025-10-13 16:46:14] 2025-10-13 20:45:39,027 | INFO     | did not find any defunct processes belonging to 2815149
[2025-10-13 16:46:14] 2025-10-13 20:45:39,028 | INFO     | ready for new job
[2025-10-13 16:46:14] 2025-10-13 20:45:39,028 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 16:46:14] 2025-10-13 20:45:39,029 | INFO     | ***************************************
[2025-10-13 16:46:14] 2025-10-13 20:45:39,029 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-13 16:46:14] 2025-10-13 20:45:39,029 | INFO     | ***************************************
[2025-10-13 16:46:14] 2025-10-13 20:45:39,029 | INFO     | 
[2025-10-13 16:46:14] 2025-10-13 20:45:39,047 | INFO     | architecture information:
[2025-10-13 16:46:14] 2025-10-13 20:45:39,047 | INFO     | executing command: cat /etc/os-release
[2025-10-13 16:46:14] 2025-10-13 20:45:39,066 | INFO     | cat /etc/os-release:
[2025-10-13 16:46:14] NAME="CentOS Linux"
[2025-10-13 16:46:14] VERSION="7 (Core)"
[2025-10-13 16:46:14] ID="centos"
[2025-10-13 16:46:14] ID_LIKE="rhel fedora"
[2025-10-13 16:46:14] VERSION_ID="7"
[2025-10-13 16:46:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 16:46:14] ANSI_COLOR="0;31"
[2025-10-13 16:46:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 16:46:14] HOME_URL="https://www.centos.org/"
[2025-10-13 16:46:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 16:46:14] 
[2025-10-13 16:46:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 16:46:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 16:46:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 16:46:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 16:46:14] 
[2025-10-13 16:46:14] 2025-10-13 20:45:39,066 | INFO     | ***************************************
[2025-10-13 16:46:14] 2025-10-13 20:45:39,569 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 16:46:14] 2025-10-13 20:45:39,586 | INFO     | sufficient remaining disk space (76620496896 B)
[2025-10-13 16:46:14] 2025-10-13 20:45:39,586 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 16:46:14] 2025-10-13 20:45:39,586 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 16:46:14] 2025-10-13 20:45:39,586 | INFO     | update_server=False
[2025-10-13 16:46:14] 2025-10-13 20:45:39,586 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 16:46:14] 2025-10-13 20:45:39,587 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 16:46:14] 2025-10-13 20:45:40,360 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:46:14] 2025-10-13 20:45:40,360 | INFO     | aborting loop
[2025-10-13 16:46:14] 2025-10-13 20:45:40,377 | INFO     | all payload control threads have been joined
[2025-10-13 16:46:14] 2025-10-13 20:45:40,591 | INFO     | [job] retrieve thread has finished
[2025-10-13 16:46:14] 2025-10-13 20:45:40,622 | INFO     | all job control threads have been joined
[2025-10-13 16:46:14] 2025-10-13 20:45:40,647 | INFO     | all data control threads have been joined
[2025-10-13 16:46:14] 2025-10-13 20:45:40,891 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 16:46:14] 2025-10-13 20:45:41,286 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 16:46:14] 2025-10-13 20:45:41,365 | INFO     | [job] job monitor thread has finished
[2025-10-13 16:46:14] 2025-10-13 20:45:41,382 | INFO     | [payload] control thread has finished
[2025-10-13 16:46:14] 2025-10-13 20:45:41,414 | INFO     | [payload] failed_post thread has finished
[2025-10-13 16:46:14] 2025-10-13 20:45:41,443 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 16:46:14] 2025-10-13 20:45:41,455 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 16:46:14] 2025-10-13 20:45:41,515 | INFO     | [job] validate thread has finished
[2025-10-13 16:46:14] 2025-10-13 20:45:41,627 | INFO     | [job] control thread has finished
[2025-10-13 16:46:14] 2025-10-13 20:45:41,652 | INFO     | [data] control thread has finished
[2025-10-13 16:46:14] 2025-10-13 20:45:41,894 | INFO     | [data] copytool_in thread has finished
[2025-10-13 16:46:14] 2025-10-13 20:45:41,940 | INFO     | [payload] validate_post thread has finished
[2025-10-13 16:46:14] 2025-10-13 20:45:42,377 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:46:14] 2025-10-13 20:45:42,896 | INFO     | [data] copytool_out thread has finished
[2025-10-13 16:46:14] 2025-10-13 20:45:43,383 | INFO     | [job] queue monitor thread has finished
[2025-10-13 16:46:14] 2025-10-13 20:45:43,593 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 16:46:14] 2025-10-13 20:45:49,798 | INFO     | job.realtimelogging is not enabled
[2025-10-13 16:46:14] 2025-10-13 20:45:50,806 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 16:46:14] 2025-10-13 20:46:08,188 | INFO     | [monitor] cgroup control has ended
[2025-10-13 16:46:14] 2025-10-13 20:46:09,031 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139753993967424)>', '<ExcThread(monitor, started 139753647228672)>']
[2025-10-13 16:46:14] 2025-10-13 20:46:10,368 | INFO     | PID=2808136 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 16:46:14] 2025-10-13 20:46:10,368 | INFO     | .. there are 48 such processes running
[2025-10-13 16:46:14] 2025-10-13 20:46:10,369 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 16:46:14] 2025-10-13 20:46:10,369 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 16:46:14] 2025-10-13 20:46:10,369 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 16:46:14] 2025-10-13 20:46:10,369 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 16:46:14] 2025-10-13 20:46:10,369 | INFO     | [monitor] control thread has ended
[2025-10-13 16:46:14] 2025-10-13 20:46:14,057 | INFO     | all workflow threads have been joined
[2025-10-13 16:46:14] 2025-10-13 20:46:14,057 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 16:46:14] 2025-10-13 20:46:14,058 | INFO     | traces error code: 0
[2025-10-13 16:46:14] 2025-10-13 20:46:14,058 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 16:46:14] 2025-10-13 20:46:14,244 [wrapper] ==== pilot stdout END ====
[2025-10-13 16:46:14] 2025-10-13 20:46:14,247 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 16:46:14] 2025-10-13 20:46:14,256 [wrapper] pilotpid: 2808136
[2025-10-13 16:46:14] 2025-10-13 20:46:14,259 [wrapper] Pilot exit status: 0
[2025-10-13 16:46:14] 2025-10-13 20:46:14,272 [wrapper] pandaids: 6831775384
[2025-10-13 16:46:14] 2025-10-13 20:46:14,381 [wrapper] cleanup supervisor_pilot 2993875 2808137
[2025-10-13 16:46:14] 2025-10-13 20:46:14,385 [wrapper] Test setup, not cleaning
[2025-10-13 16:46:14] 2025-10-13 20:46:14,388 [wrapper] apfmon messages muted
[2025-10-13 16:46:14] 2025-10-13 20:46:14,392 [wrapper] ==== wrapper stdout END ====
[2025-10-13 16:46:14] 2025-10-13 20:46:14,401 [wrapper] ==== wrapper stderr END ====
[2025-10-13 16:46:14]  *** Error codes and diagnostics ***
[2025-10-13 16:46:14]     "exeErrorCode": 0,
[2025-10-13 16:46:14]     "exeErrorDiag": "",
[2025-10-13 16:46:14]     "pilotErrorCode": 0,
[2025-10-13 16:46:14]     "pilotErrorDiag": "",
[2025-10-13 16:46:14]  *** Listing of results directory ***
[2025-10-13 16:46:14] total 393824
[2025-10-13 16:46:14] -rw-r--r--. 1 boincer umatlas    552446 Oct  5 12:06 pilot3.tar.gz
[2025-10-13 16:46:14] -rw-r--r--. 1 boincer umatlas      5112 Oct  5 12:45 queuedata.json
[2025-10-13 16:46:14] -rwx------. 1 boincer umatlas     36292 Oct  5 12:45 runpilot2-wrapper.sh
[2025-10-13 16:46:14] -rw-r--r--. 1 boincer umatlas       100 Oct 13 15:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 16:46:14] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 15:53 run_atlas
[2025-10-13 16:46:14] -rw-r--r--. 1 boincer umatlas       105 Oct 13 15:53 job.xml
[2025-10-13 16:46:14] -rw-r--r--. 2 boincer umatlas 216592557 Oct 13 15:53 EVNT.46376901._003325.pool.root.1
[2025-10-13 16:46:14] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 15:53 shared
[2025-10-13 16:46:14] -rw-r--r--. 2 boincer umatlas    565601 Oct 13 15:53 input.tar.gz
[2025-10-13 16:46:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 15:53 start_atlas.sh
[2025-10-13 16:46:14] -rw-r--r--. 1 boincer umatlas         0 Oct 13 15:53 boinc_lockfile
[2025-10-13 16:46:14] -rw-r--r--. 1 boincer umatlas      2519 Oct 13 15:53 pandaJob.out
[2025-10-13 16:46:14] -rw-------. 1 boincer umatlas    972799 Oct 13 15:54 agis_schedconf.cvmfs.json
[2025-10-13 16:46:14] -rw-------. 1 boincer umatlas   1560580 Oct 13 15:54 agis_ddmendpoints.agis.ALL.json
[2025-10-13 16:46:14] drwx------. 4 boincer umatlas      4096 Oct 13 15:54 pilot3
[2025-10-13 16:46:14] -rw-r--r--. 1 boincer umatlas      7160 Oct 13 16:39 init_data.xml
[2025-10-13 16:46:14] -rw-------. 1 boincer umatlas 181232705 Oct 13 16:45 HITS.46376905._090325.pool.root.1
[2025-10-13 16:46:14] -rw-r--r--. 1 boincer umatlas       530 Oct 13 16:45 boinc_task_state.xml
[2025-10-13 16:46:14] -rw-------. 1 boincer umatlas      1036 Oct 13 16:45 memory_monitor_summary.json
[2025-10-13 16:46:14] -rw-------. 1 boincer umatlas    326270 Oct 13 16:45 log.46376905._090325.job.log.tgz.1
[2025-10-13 16:46:14] -rw-------. 1 boincer umatlas      7781 Oct 13 16:45 heartbeat.json
[2025-10-13 16:46:14] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 16:45 boinc_mmap_file
[2025-10-13 16:46:14] -rw-r--r--. 1 boincer umatlas        27 Oct 13 16:45 wrapper_checkpoint.txt
[2025-10-13 16:46:14] -rw-------. 1 boincer umatlas        95 Oct 13 16:46 pilot_heartbeat.json
[2025-10-13 16:46:14] -rw-------. 1 boincer umatlas      4896 Oct 13 16:46 pilotlog.txt
[2025-10-13 16:46:14] -rw-------. 1 boincer umatlas    457989 Oct 13 16:46 log.46376905._090325.job.log.1
[2025-10-13 16:46:14] -rw-------. 1 boincer umatlas       357 Oct 13 16:46 output.list
[2025-10-13 16:46:14] -rw-r--r--. 1 boincer umatlas       620 Oct 13 16:46 runtime_log
[2025-10-13 16:46:14] -rw-------. 1 boincer umatlas    798720 Oct 13 16:46 result.tar.gz
[2025-10-13 16:46:14] -rw-r--r--. 1 boincer umatlas      8698 Oct 13 16:46 runtime_log.err
[2025-10-13 16:46:14] -rw-------. 1 boincer umatlas       652 Oct 13 16:46 aZYLDmb2gP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtDQNDmLgF5Ln.diag
[2025-10-13 16:46:14] -rw-r--r--. 1 boincer umatlas     21772 Oct 13 16:46 stderr.txt
[2025-10-13 16:46:14] HITS file was successfully produced:
[2025-10-13 16:46:14] -rw-------. 1 boincer umatlas 181232705 Oct 13 16:45 shared/HITS.pool.root.1
[2025-10-13 16:46:14]  *** Contents of shared directory: ***
[2025-10-13 16:46:14] total 389864
[2025-10-13 16:46:14] -rw-r--r--. 2 boincer umatlas 216592557 Oct 13 15:53 ATLAS.root_0
[2025-10-13 16:46:14] -rw-r--r--. 2 boincer umatlas    565601 Oct 13 15:53 input.tar.gz
[2025-10-13 16:46:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 15:53 start_atlas.sh
[2025-10-13 16:46:14] -rw-------. 1 boincer umatlas 181232705 Oct 13 16:45 HITS.pool.root.1
[2025-10-13 16:46:14] -rw-------. 1 boincer umatlas    798720 Oct 13 16:46 result.tar.gz
16:46:15 (2804216): run_atlas exited; CPU time 21473.907698
16:46:15 (2804216): called boinc_finish(0)

</stderr_txt>
]]>

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