Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:28:33 (5225): wrapper (7.7.26015): starting
15:28:33 (5225): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 15:28:33] Arguments: --nthreads 8
[2025-10-13 15:28:33] Threads: 8
[2025-10-13 15:28:33] Checking for CVMFS
[2025-10-13 15:28:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 15:28:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 15:28:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 15:28:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 15:28:33] 2.11.2.0 2895 10360 80908 151671 0 1 14087319 20275201 1 130560 0 6282488 99.988 348915 35437 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 15:28:33] CVMFS is ok
[2025-10-13 15:28:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 15:28:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 15:28:33] Further information can be found at the LHC@home message board.
[2025-10-13 15:28:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 15:28:33] Checking for apptainer binary...
[2025-10-13 15:28:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 15:28:33] Running /usr/bin/apptainer --version
[2025-10-13 15:28:33] apptainer version 1.3.2-1.el7
[2025-10-13 15:28:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 15:28:35] c-204-7.aglt2.org
[2025-10-13 15:28:35] apptainer works
[2025-10-13 15:28:35] Set ATHENA_PROC_NUMBER=8
[2025-10-13 15:28:35] Set ATHENA_CORE_NUMBER=8
[2025-10-13 15:28:35] Starting ATLAS job with PandaID=6831946228
[2025-10-13 15:28:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 17:19:10]  *** The last 200 lines of the pilot log: ***
[2025-10-13 17:19:10] 2025-10-13 21:18:16,370 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 17:19:10] 2025-10-13 21:18:16,371 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 17:19:10] 2025-10-13 21:18:16,371 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 17:19:10] 2025-10-13 21:18:16,374 | INFO     | fitting pss+swap vs Time
[2025-10-13 17:19:10] 2025-10-13 21:18:16,374 | INFO     | sum of square deviations: 379832238.0
[2025-10-13 17:19:10] 2025-10-13 21:18:16,375 | INFO     | sum of deviations: -1303554322.999999
[2025-10-13 17:19:10] 2025-10-13 21:18:16,375 | INFO     | mean x: 1760386998.0
[2025-10-13 17:19:10] 2025-10-13 21:18:16,375 | INFO     | mean y: 2586423.7476635515
[2025-10-13 17:19:10] 2025-10-13 21:18:16,375 | INFO     | -- intersect: 6044095942.473377
[2025-10-13 17:19:10] 2025-10-13 21:18:16,375 | INFO     | intersect: 6044095942.473377
[2025-10-13 17:19:10] 2025-10-13 21:18:16,375 | INFO     | chi2: 1.664788465485448
[2025-10-13 17:19:10] 2025-10-13 21:18:16,376 | INFO     | sum of square deviations: 329031285.5
[2025-10-13 17:19:10] 2025-10-13 21:18:16,376 | INFO     | sum of deviations: -367135240.4999994
[2025-10-13 17:19:10] 2025-10-13 21:18:16,376 | INFO     | mean x: 1760386845.5
[2025-10-13 17:19:10] 2025-10-13 21:18:16,377 | INFO     | mean y: 2589232.4411764704
[2025-10-13 17:19:10] 2025-10-13 21:18:16,377 | INFO     | -- intersect: 1966840282.044415
[2025-10-13 17:19:10] 2025-10-13 21:18:16,377 | INFO     | intersect: 1966840282.044415
[2025-10-13 17:19:10] 2025-10-13 21:18:16,377 | INFO     | chi2: 1.6679449500430181
[2025-10-13 17:19:10] 2025-10-13 21:18:16,377 | INFO     | current chi2=1.6679449500430181 (change=-0.18960274070915098 %)
[2025-10-13 17:19:10] 2025-10-13 21:18:16,377 | INFO     | right removable region: 101
[2025-10-13 17:19:10] 2025-10-13 21:18:16,378 | INFO     | sum of square deviations: 329031285.5
[2025-10-13 17:19:10] 2025-10-13 21:18:16,378 | INFO     | sum of deviations: -18244034696.0
[2025-10-13 17:19:10] 2025-10-13 21:18:16,378 | INFO     | mean x: 1760387150.5
[2025-10-13 17:19:10] 2025-10-13 21:18:16,379 | INFO     | mean y: 2636248.7843137253
[2025-10-13 17:19:10] 2025-10-13 21:18:16,379 | INFO     | -- intersect: 97612090630.33301
[2025-10-13 17:19:10] 2025-10-13 21:18:16,379 | INFO     | intersect: 97612090630.33301
[2025-10-13 17:19:10] 2025-10-13 21:18:16,379 | INFO     | chi2: 0.1250351075733699
[2025-10-13 17:19:10] 2025-10-13 21:18:16,379 | INFO     | current chi2=0.1250351075733699 (change=92.48942972842438 %)
[2025-10-13 17:19:10] 2025-10-13 21:18:16,379 | INFO     | sum of square deviations: 282974608.0
[2025-10-13 17:19:10] 2025-10-13 21:18:16,380 | INFO     | sum of deviations: -18615552023.999985
[2025-10-13 17:19:10] 2025-10-13 21:18:16,380 | INFO     | mean x: 1760387303.0
[2025-10-13 17:19:10] 2025-10-13 21:18:16,380 | INFO     | mean y: 2637295.092783505
[2025-10-13 17:19:10] 2025-10-13 21:18:16,380 | INFO     | -- intersect: 115810135547.32298
[2025-10-13 17:19:10] 2025-10-13 21:18:16,381 | INFO     | intersect: 115810135547.32298
[2025-10-13 17:19:10] 2025-10-13 21:18:16,381 | INFO     | chi2: 0.08425758600294456
[2025-10-13 17:19:10] 2025-10-13 21:18:16,381 | INFO     | current chi2=0.08425758600294456 (change=32.61285759001513 %)
[2025-10-13 17:19:10] 2025-10-13 21:18:16,381 | INFO     | sum of square deviations: 241429643.0
[2025-10-13 17:19:10] 2025-10-13 21:18:16,382 | INFO     | sum of deviations: -16564791316.000002
[2025-10-13 17:19:10] 2025-10-13 21:18:16,382 | INFO     | mean x: 1760387455.5
[2025-10-13 17:19:10] 2025-10-13 21:18:16,382 | INFO     | mean y: 2629743.652173913
[2025-10-13 17:19:10] 2025-10-13 21:18:16,382 | INFO     | -- intersect: 120785026111.03503
[2025-10-13 17:19:10] 2025-10-13 21:18:16,382 | INFO     | intersect: 120785026111.03503
[2025-10-13 17:19:10] 2025-10-13 21:18:16,382 | INFO     | chi2: 0.08262443211751984
[2025-10-13 17:19:10] 2025-10-13 21:18:16,383 | INFO     | current chi2=0.08262443211751984 (change=1.9382870586485161 %)
[2025-10-13 17:19:10] 2025-10-13 21:18:16,383 | INFO     | left removable region: 30
[2025-10-13 17:19:10] 2025-10-13 21:18:16,383 | INFO     | sum of square deviations: 110960220.0
[2025-10-13 17:19:10] 2025-10-13 21:18:16,383 | INFO     | sum of deviations: -8044235188.0
[2025-10-13 17:19:10] 2025-10-13 21:18:16,383 | INFO     | mean x: 1760387730.0
[2025-10-13 17:19:10] 2025-10-13 21:18:16,384 | INFO     | mean y: 2599900.676056338
[2025-10-13 17:19:10] 2025-10-13 21:18:16,384 | INFO     | -- intersect: 127624669523.37006
[2025-10-13 17:19:10] 2025-10-13 21:18:16,384 | INFO     | intersect: 127624669523.37006
[2025-10-13 17:19:10] 2025-10-13 21:18:16,384 | INFO     | chi2: 0.07341463845614492
[2025-10-13 17:19:10] 2025-10-13 21:18:16,384 | INFO     | -- intersect: 127624669523.37006
[2025-10-13 17:19:10] 2025-10-13 21:18:16,384 | INFO     | current memory leak: -72.50 B/s (using 71 data points, chi2=0.07)
[2025-10-13 17:19:10] 2025-10-13 21:18:16,385 | INFO     | could have reported an average CPU frequency of 1895 MHz (7 samples)
[2025-10-13 17:19:10] 2025-10-13 21:18:16,385 | INFO     | ..............................
[2025-10-13 17:19:10] 2025-10-13 21:18:16,385 | INFO     | . Timing measurements:
[2025-10-13 17:19:10] 2025-10-13 21:18:16,385 | INFO     | . get job = 0 s
[2025-10-13 17:19:10] 2025-10-13 21:18:16,385 | INFO     | . initial setup = 3 s
[2025-10-13 17:19:10] 2025-10-13 21:18:16,386 | INFO     | . payload setup = 8 s
[2025-10-13 17:19:10] 2025-10-13 21:18:16,386 | INFO     | . stage-in = 0 s
[2025-10-13 17:19:10] 2025-10-13 21:18:16,386 | INFO     | . payload execution = 6522 s
[2025-10-13 17:19:10] 2025-10-13 21:18:16,386 | INFO     | . stage-out = 0 s
[2025-10-13 17:19:10] 2025-10-13 21:18:16,386 | INFO     | . log creation = 0 s
[2025-10-13 17:19:10] 2025-10-13 21:18:16,386 | INFO     | ..............................
[2025-10-13 17:19:10] 2025-10-13 21:18:16,490 | INFO     | 
[2025-10-13 17:19:10] 2025-10-13 21:18:16,490 | INFO     | job summary report
[2025-10-13 17:19:10] 2025-10-13 21:18:16,490 | INFO     | --------------------------------------------------
[2025-10-13 17:19:10] 2025-10-13 21:18:16,491 | INFO     | PanDA job id: 6831946228
[2025-10-13 17:19:10] 2025-10-13 21:18:16,491 | INFO     | task id: 46376905
[2025-10-13 17:19:10] 2025-10-13 21:18:16,491 | INFO     | errors: (none)
[2025-10-13 17:19:10] 2025-10-13 21:18:16,491 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 17:19:10] 2025-10-13 21:18:16,491 | INFO     | pilot state: finished 
[2025-10-13 17:19:10] 2025-10-13 21:18:16,491 | INFO     | transexitcode: 0
[2025-10-13 17:19:10] 2025-10-13 21:18:16,491 | INFO     | exeerrorcode: 0
[2025-10-13 17:19:10] 2025-10-13 21:18:16,491 | INFO     | exeerrordiag: 
[2025-10-13 17:19:10] 2025-10-13 21:18:16,492 | INFO     | exitcode: 0
[2025-10-13 17:19:10] 2025-10-13 21:18:16,492 | INFO     | exitmsg: OK
[2025-10-13 17:19:10] 2025-10-13 21:18:16,492 | INFO     | cpuconsumptiontime: 48096 s
[2025-10-13 17:19:10] 2025-10-13 21:18:16,492 | INFO     | nevents: 400
[2025-10-13 17:19:10] 2025-10-13 21:18:16,492 | INFO     | neventsw: 0
[2025-10-13 17:19:10] 2025-10-13 21:18:16,492 | INFO     | pid: 15387
[2025-10-13 17:19:10] 2025-10-13 21:18:16,492 | INFO     | pgrp: 15387
[2025-10-13 17:19:10] 2025-10-13 21:18:16,492 | INFO     | corecount: 8
[2025-10-13 17:19:10] 2025-10-13 21:18:16,493 | INFO     | event service: False
[2025-10-13 17:19:10] 2025-10-13 21:18:16,493 | INFO     | sizes: {0: 2348816, 6: 2349078, 11: 2349106, 6534: 2376154, 6536: 2385208, 6545: 2385346}
[2025-10-13 17:19:10] 2025-10-13 21:18:16,493 | INFO     | --------------------------------------------------
[2025-10-13 17:19:10] 2025-10-13 21:18:16,493 | INFO     | 
[2025-10-13 17:19:10] 2025-10-13 21:18:16,493 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 17:19:10] 2025-10-13 21:18:16,520 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 17:19:10] 2025-10-13 21:18:16,520 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 17:19:10] 2025-10-13 21:18:16,520 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 17:19:10] 2025-10-13 21:18:16,520 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 17:19:10] 2025-10-13 21:18:16,520 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 17:19:10] 2025-10-13 21:18:16,521 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 17:19:10] 2025-10-13 21:18:16,521 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 17:19:10] 2025-10-13 21:18:16,521 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 17:19:10] 2025-10-13 21:18:16,521 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 17:19:10] 2025-10-13 21:18:16,521 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 17:19:10] 2025-10-13 21:18:16,521 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 17:19:10] 2025-10-13 21:18:16,521 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 17:19:10] 2025-10-13 21:18:16,522 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 17:19:10] 2025-10-13 21:18:16,522 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 17:19:10] 2025-10-13 21:18:16,522 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 17:19:10] 2025-10-13 21:18:16,522 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 17:19:10] 2025-10-13 21:18:16,522 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 17:19:10] 2025-10-13 21:18:16,522 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 17:19:10] 2025-10-13 21:18:16,522 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 17:19:10] 2025-10-13 21:18:16,523 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 17:19:10] 2025-10-13 21:18:16,523 | INFO     | job 6831946228 has completed (purged errors)
[2025-10-13 17:19:10] 2025-10-13 21:18:16,523 | INFO     | overall cleanup function is called
[2025-10-13 17:19:10] 2025-10-13 21:18:17,528 | INFO     | --- collectZombieJob: --- 10, [15387]
[2025-10-13 17:19:10] 2025-10-13 21:18:17,528 | INFO     | zombie collector waiting for pid 15387
[2025-10-13 17:19:10] 2025-10-13 21:18:17,528 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 17:19:10] 2025-10-13 21:18:17,529 | INFO     | collected zombie processes
[2025-10-13 17:19:10] 2025-10-13 21:18:17,529 | INFO     | will attempt to kill all subprocesses of pid=15387
[2025-10-13 17:19:10] 2025-10-13 21:18:17,625 | INFO     | process IDs to be killed: [15387] (in reverse order)
[2025-10-13 17:19:10] 2025-10-13 21:18:17,693 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 17:19:10] 2025-10-13 21:18:17,693 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 17:19:10] 2025-10-13 21:18:17,696 | INFO     | did not find any defunct processes belonging to 15387
[2025-10-13 17:19:10] 2025-10-13 21:18:17,699 | INFO     | did not find any defunct processes belonging to 15387
[2025-10-13 17:19:10] 2025-10-13 21:18:17,699 | INFO     | ready for new job
[2025-10-13 17:19:10] 2025-10-13 21:18:17,700 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 17:19:10] 2025-10-13 21:18:17,701 | INFO     | ***************************************
[2025-10-13 17:19:10] 2025-10-13 21:18:17,702 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-13 17:19:10] 2025-10-13 21:18:17,702 | INFO     | ***************************************
[2025-10-13 17:19:10] 2025-10-13 21:18:17,702 | INFO     | 
[2025-10-13 17:19:10] 2025-10-13 21:18:17,702 | INFO     | architecture information:
[2025-10-13 17:19:10] 2025-10-13 21:18:17,703 | INFO     | executing command: cat /etc/os-release
[2025-10-13 17:19:10] 2025-10-13 21:18:17,721 | INFO     | cat /etc/os-release:
[2025-10-13 17:19:10] NAME="CentOS Linux"
[2025-10-13 17:19:10] VERSION="7 (Core)"
[2025-10-13 17:19:10] ID="centos"
[2025-10-13 17:19:10] ID_LIKE="rhel fedora"
[2025-10-13 17:19:10] VERSION_ID="7"
[2025-10-13 17:19:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 17:19:10] ANSI_COLOR="0;31"
[2025-10-13 17:19:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 17:19:10] HOME_URL="https://www.centos.org/"
[2025-10-13 17:19:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 17:19:10] 
[2025-10-13 17:19:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 17:19:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 17:19:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 17:19:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 17:19:10] 
[2025-10-13 17:19:10] 2025-10-13 21:18:17,721 | INFO     | ***************************************
[2025-10-13 17:19:10] 2025-10-13 21:18:18,222 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 17:19:10] 2025-10-13 21:18:18,241 | INFO     | sufficient remaining disk space (18614321152 B)
[2025-10-13 17:19:10] 2025-10-13 21:18:18,242 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 17:19:10] 2025-10-13 21:18:18,242 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 17:19:10] 2025-10-13 21:18:18,242 | INFO     | update_server=False
[2025-10-13 17:19:10] 2025-10-13 21:18:18,242 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 17:19:10] 2025-10-13 21:18:18,242 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 17:19:10] 2025-10-13 21:18:18,243 | INFO     | aborting loop
[2025-10-13 17:19:10] 2025-10-13 21:18:18,243 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 17:19:10] 2025-10-13 21:18:18,243 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 17:19:10] 2025-10-13 21:18:18,278 | INFO     | all data control threads have been joined
[2025-10-13 17:19:10] 2025-10-13 21:18:18,434 | INFO     | all job control threads have been joined
[2025-10-13 17:19:10] 2025-10-13 21:18:18,697 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 17:19:10] 2025-10-13 21:18:19,090 | INFO     | all payload control threads have been joined
[2025-10-13 17:19:10] 2025-10-13 21:18:19,244 | INFO     | [job] retrieve thread has finished
[2025-10-13 17:19:10] 2025-10-13 21:18:19,247 | INFO     | [job] queue monitor thread has finished
[2025-10-13 17:19:10] 2025-10-13 21:18:19,249 | INFO     | [job] job monitor thread has finished
[2025-10-13 17:19:10] 2025-10-13 21:18:19,284 | INFO     | [data] control thread has finished
[2025-10-13 17:19:10] 2025-10-13 21:18:19,439 | INFO     | [job] control thread has finished
[2025-10-13 17:19:10] 2025-10-13 21:18:19,655 | INFO     | [payload] validate_post thread has finished
[2025-10-13 17:19:10] 2025-10-13 21:18:19,743 | INFO     | [job] validate thread has finished
[2025-10-13 17:19:10] 2025-10-13 21:18:19,888 | INFO     | [payload] failed_post thread has finished
[2025-10-13 17:19:10] 2025-10-13 21:18:20,096 | INFO     | [payload] control thread has finished
[2025-10-13 17:19:10] 2025-10-13 21:18:20,249 | INFO     | [data] copytool_out thread has finished
[2025-10-13 17:19:10] 2025-10-13 21:18:20,261 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 17:19:10] 2025-10-13 21:18:20,352 | INFO     | [data] copytool_in thread has finished
[2025-10-13 17:19:10] 2025-10-13 21:18:20,708 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 17:19:10] 2025-10-13 21:18:20,723 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 17:19:10] 2025-10-13 21:18:22,703 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 17:19:10] 2025-10-13 21:18:28,541 | INFO     | job.realtimelogging is not enabled
[2025-10-13 17:19:10] 2025-10-13 21:18:29,546 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 17:19:10] 2025-10-13 21:18:48,215 | INFO     | PID=8912 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 17:19:10] 2025-10-13 21:18:48,216 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 17:19:10] 2025-10-13 21:18:48,216 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 17:19:10] 2025-10-13 21:18:48,216 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 17:19:10] 2025-10-13 21:19:04,655 | INFO     | [monitor] cgroup control has ended
[2025-10-13 17:19:10] 2025-10-13 21:19:04,921 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140546400905024)>', '<ExcThread(monitor, started 140545691219712)>']
[2025-10-13 17:19:10] 2025-10-13 21:19:05,300 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 17:19:10] 2025-10-13 21:19:05,300 | INFO     | [monitor] control thread has ended
[2025-10-13 17:19:10] 2025-10-13 21:19:09,947 | INFO     | all workflow threads have been joined
[2025-10-13 17:19:10] 2025-10-13 21:19:09,947 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 17:19:10] 2025-10-13 21:19:09,947 | INFO     | traces error code: 0
[2025-10-13 17:19:10] 2025-10-13 21:19:09,948 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 17:19:10] 2025-10-13 21:19:10,055 [wrapper] ==== pilot stdout END ====
[2025-10-13 17:19:10] 2025-10-13 21:19:10,059 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 17:19:10] 2025-10-13 21:19:10,062 [wrapper] pilotpid: 8912
[2025-10-13 17:19:10] 2025-10-13 21:19:10,066 [wrapper] Pilot exit status: 0
[2025-10-13 17:19:10] 2025-10-13 21:19:10,086 [wrapper] pandaids: 6831946228
[2025-10-13 17:19:10] 2025-10-13 21:19:10,143 [wrapper] cleanup supervisor_pilot 17396 8913
[2025-10-13 17:19:10] 2025-10-13 21:19:10,148 [wrapper] Test setup, not cleaning
[2025-10-13 17:19:10] 2025-10-13 21:19:10,153 [wrapper] apfmon messages muted
[2025-10-13 17:19:10] 2025-10-13 21:19:10,158 [wrapper] ==== wrapper stdout END ====
[2025-10-13 17:19:10] 2025-10-13 21:19:10,163 [wrapper] ==== wrapper stderr END ====
[2025-10-13 17:19:10]  *** Error codes and diagnostics ***
[2025-10-13 17:19:10]     "exeErrorCode": 0,
[2025-10-13 17:19:10]     "exeErrorDiag": "",
[2025-10-13 17:19:10]     "pilotErrorCode": 0,
[2025-10-13 17:19:10]     "pilotErrorDiag": "",
[2025-10-13 17:19:10]  *** Listing of results directory ***
[2025-10-13 17:19:10] total 386980
[2025-10-13 17:19:10] -rw-r--r-- 1 boincer umatlas      5112 Oct  5 15:35 queuedata.json
[2025-10-13 17:19:10] -rw-r--r-- 1 boincer umatlas    552446 Oct  5 15:35 pilot3.tar.gz
[2025-10-13 17:19:10] -rwx------ 1 boincer umatlas     36292 Oct  5 15:36 runpilot2-wrapper.sh
[2025-10-13 17:19:10] -rw-r--r-- 1 boincer umatlas       100 Oct 13 15:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 17:19:10] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 15:28 run_atlas
[2025-10-13 17:19:10] -rw-r--r-- 1 boincer umatlas       105 Oct 13 15:28 job.xml
[2025-10-13 17:19:10] -rw-r--r-- 2 boincer umatlas 214104114 Oct 13 15:28 EVNT.46376901._003465.pool.root.1
[2025-10-13 17:19:10] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 15:28 start_atlas.sh
[2025-10-13 17:19:10] drwxrwx--x 2 boincer umatlas      4096 Oct 13 15:28 shared
[2025-10-13 17:19:10] -rw-r--r-- 2 boincer umatlas    565602 Oct 13 15:28 input.tar.gz
[2025-10-13 17:19:10] -rw-r--r-- 1 boincer umatlas         0 Oct 13 15:28 boinc_lockfile
[2025-10-13 17:19:10] -rw-r--r-- 1 boincer umatlas      2519 Oct 13 15:28 pandaJob.out
[2025-10-13 17:19:10] -rw------- 1 boincer umatlas    972799 Oct 13 15:28 agis_schedconf.cvmfs.json
[2025-10-13 17:19:10] -rw------- 1 boincer umatlas   1560580 Oct 13 15:28 agis_ddmendpoints.agis.ALL.json
[2025-10-13 17:19:10] drwx------ 4 boincer umatlas      4096 Oct 13 15:28 pilot3
[2025-10-13 17:19:10] -rw-r--r-- 1 boincer umatlas      5909 Oct 13 17:10 init_data.xml
[2025-10-13 17:19:10] -rw------- 1 boincer umatlas 175699251 Oct 13 17:17 HITS.46376905._094069.pool.root.1
[2025-10-13 17:19:10] -rw-r--r-- 1 boincer umatlas       530 Oct 13 17:18 boinc_task_state.xml
[2025-10-13 17:19:10] -rw------- 1 boincer umatlas      1047 Oct 13 17:18 memory_monitor_summary.json
[2025-10-13 17:19:10] -rw------- 1 boincer umatlas    363876 Oct 13 17:18 log.46376905._094069.job.log.tgz.1
[2025-10-13 17:19:10] -rw------- 1 boincer umatlas      7850 Oct 13 17:18 heartbeat.json
[2025-10-13 17:19:10] -rw------- 1 boincer umatlas        95 Oct 13 17:18 pilot_heartbeat.json
[2025-10-13 17:19:10] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 17:19 boinc_mmap_file
[2025-10-13 17:19:10] -rw-r--r-- 1 boincer umatlas        27 Oct 13 17:19 wrapper_checkpoint.txt
[2025-10-13 17:19:10] -rw------- 1 boincer umatlas      4817 Oct 13 17:19 pilotlog.txt
[2025-10-13 17:19:10] -rw------- 1 boincer umatlas    924900 Oct 13 17:19 log.46376905._094069.job.log.1
[2025-10-13 17:19:10] -rw------- 1 boincer umatlas       357 Oct 13 17:19 output.list
[2025-10-13 17:19:10] -rw-r--r-- 1 boincer umatlas       620 Oct 13 17:19 runtime_log
[2025-10-13 17:19:10] -rw------- 1 boincer umatlas   1310720 Oct 13 17:19 result.tar.gz
[2025-10-13 17:19:10] -rw-r--r-- 1 boincer umatlas      8698 Oct 13 17:19 runtime_log.err
[2025-10-13 17:19:10] -rw------- 1 boincer umatlas       658 Oct 13 17:19 G6PMDmohjP8n9Rq4apOajLDm4fhM0noT9bVof3QYDm1JHMDmCHgnLo.diag
[2025-10-13 17:19:10] -rw-r--r-- 1 boincer umatlas     20826 Oct 13 17:19 stderr.txt
[2025-10-13 17:19:10] HITS file was successfully produced:
[2025-10-13 17:19:10] -rw------- 1 boincer umatlas 175699251 Oct 13 17:17 shared/HITS.pool.root.1
[2025-10-13 17:19:10]  *** Contents of shared directory: ***
[2025-10-13 17:19:10] total 382528
[2025-10-13 17:19:10] -rw-r--r-- 2 boincer umatlas 214104114 Oct 13 15:28 ATLAS.root_0
[2025-10-13 17:19:10] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 15:28 start_atlas.sh
[2025-10-13 17:19:10] -rw-r--r-- 2 boincer umatlas    565602 Oct 13 15:28 input.tar.gz
[2025-10-13 17:19:10] -rw------- 1 boincer umatlas 175699251 Oct 13 17:17 HITS.pool.root.1
[2025-10-13 17:19:10] -rw------- 1 boincer umatlas   1310720 Oct 13 17:19 result.tar.gz
17:19:11 (5225): run_atlas exited; CPU time 48114.072759
17:19:11 (5225): called boinc_finish(0)

</stderr_txt>
]]>

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